BLASTX nr result
ID: Ephedra28_contig00023294
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00023294
(745 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002321639.2| pentatricopeptide repeat-containing family p... 102 1e-19
ref|XP_004236267.1| PREDICTED: pentatricopeptide repeat-containi... 102 1e-19
gb|EMJ11699.1| hypothetical protein PRUPE_ppa002676mg [Prunus pe... 100 5e-19
ref|XP_006344474.1| PREDICTED: pentatricopeptide repeat-containi... 100 7e-19
gb|EPS62186.1| hypothetical protein M569_12607 [Genlisea aurea] 100 7e-19
ref|XP_006852369.1| hypothetical protein AMTR_s00049p00223850 [A... 100 9e-19
ref|XP_002511313.1| pentatricopeptide repeat-containing protein,... 97 6e-18
ref|XP_006476892.1| PREDICTED: pentatricopeptide repeat-containi... 95 2e-17
ref|XP_006439927.1| hypothetical protein CICLE_v10019266mg [Citr... 94 6e-17
ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containi... 93 8e-17
gb|EXB93901.1| hypothetical protein L484_002057 [Morus notabilis] 92 1e-16
ref|XP_004299145.1| PREDICTED: pentatricopeptide repeat-containi... 92 2e-16
ref|XP_006290749.1| hypothetical protein CARUB_v10016848mg [Caps... 92 2e-16
ref|XP_006404282.1| hypothetical protein EUTSA_v10010209mg [Eutr... 90 7e-16
ref|XP_004515865.1| PREDICTED: pentatricopeptide repeat-containi... 90 7e-16
ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containi... 89 1e-15
ref|XP_002877605.1| pentatricopeptide repeat-containing protein ... 88 3e-15
ref|NP_190408.1| pentatricopeptide repeat-containing protein [Ar... 88 3e-15
gb|ESW27478.1| hypothetical protein PHAVU_003G205300g [Phaseolus... 87 4e-15
ref|XP_003549820.1| PREDICTED: pentatricopeptide repeat-containi... 86 1e-14
>ref|XP_002321639.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550322390|gb|EEF05766.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 486
Score = 102 bits (255), Expect = 1e-19
Identities = 55/179 (30%), Positives = 95/179 (53%), Gaps = 3/179 (1%)
Frame = +2
Query: 215 VLNILKERQWCHETEVKLNGISNISEDH-IVSALKTLN--PEKALSFFTWXXXXXXXXXX 385
V+ I+ ER+W E E KL G+ + D+ ++ LK L P KAL FF W
Sbjct: 62 VVRIILEREWNKEVEKKLVGMRIVLTDNFVIRVLKELRSYPVKALRFFQWVDRREGYQHN 121
Query: 386 XXVYNAMLKVVCKKTHIQYFWKLAKEMQSYGFLMGSYVFSKAMARFQTQGMPEDILKLFM 565
YNA+++V+ + I FW + EM++ G+ M + K +FQ + ED ++L+
Sbjct: 122 TVTYNALVRVLGRDDSIGEFWSVVDEMKNAGYEMDIDTYIKISRQFQKIKLMEDAVRLYE 181
Query: 566 WTIENDKEQPSSRCHKVLFALSTNKTPDIDAAYRVIEAFKKGGGSMDKKIYDGLHRCLT 742
+ ++ + C+ +L +++ + PD+D RV++ +K G S+ K +YDG+HR T
Sbjct: 182 FMMDGPFKPSVQDCYILLRSVAASDNPDLDLVSRVVDGYKATGNSLSKSVYDGMHRSFT 240
>ref|XP_004236267.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Solanum lycopersicum]
Length = 642
Score = 102 bits (254), Expect = 1e-19
Identities = 56/181 (30%), Positives = 97/181 (53%), Gaps = 5/181 (2%)
Frame = +2
Query: 215 VLNILKERQWCHETEVKLNGIS-NISEDHIVSALKTL----NPEKALSFFTWXXXXXXXX 379
V ++ +++W E E +L + ++S++ ++ LK L NP KA SFF W
Sbjct: 205 VSELITKQEWGVEVERQLGEMKLSVSDNFVLRVLKELREVGNPLKAFSFFKWVARNLDFQ 264
Query: 380 XXXXVYNAMLKVVCKKTHIQYFWKLAKEMQSYGFLMGSYVFSKAMARFQTQGMPEDILKL 559
YN +L+V+C++ I+ FW + KEM S GF + + K FQ M +D ++L
Sbjct: 265 HSTVTYNGILRVLCREESIEEFWGVVKEMMSLGFEIDLDTYIKISRHFQKIKMLKDAVEL 324
Query: 560 FMWTIENDKEQPSSRCHKVLFALSTNKTPDIDAAYRVIEAFKKGGGSMDKKIYDGLHRCL 739
+ ++ + C+ +L +++ + + D+D +RV+E F+ G S K IYD +HRCL
Sbjct: 325 YELMMDGQFKPSLGECNILLRSIAQSYSSDLDLLFRVVEKFEAAGHSRSKIIYDVIHRCL 384
Query: 740 T 742
T
Sbjct: 385 T 385
>gb|EMJ11699.1| hypothetical protein PRUPE_ppa002676mg [Prunus persica]
Length = 646
Score = 100 bits (249), Expect = 5e-19
Identities = 57/189 (30%), Positives = 96/189 (50%), Gaps = 3/189 (1%)
Frame = +2
Query: 185 AEAEVQEKNQVLNILKERQWCHETEVKLNGIS-NISEDHIVSALKTLN--PEKALSFFTW 355
A EV +K V +++ +W E +L + +S++ +V LK L P KALSFF W
Sbjct: 214 ATDEVAKK--VADVVSGSEWSAGIEKELGELKITLSDNFVVRVLKELRICPSKALSFFHW 271
Query: 356 XXXXXXXXXXXXVYNAMLKVVCKKTHIQYFWKLAKEMQSYGFLMGSYVFSKAMARFQTQG 535
YNA+ +++ + I FW + +EM+ G + + K +FQ
Sbjct: 272 VGQSSGYEHNTITYNAVARILAQADSIGEFWSVIEEMKGAGHELDLDTYIKITRQFQKSK 331
Query: 536 MPEDILKLFMWTIENDKEQPSSRCHKVLFALSTNKTPDIDAAYRVIEAFKKGGGSMDKKI 715
M ED +KL+ ++ + + C +L ++S N PD+D +RV + F+ G ++ K +
Sbjct: 332 MMEDAVKLYELMMDGPYKPSAQDCSMLLRSISANDKPDLDMVFRVAKKFESAGNTLSKAV 391
Query: 716 YDGLHRCLT 742
YDG+HR LT
Sbjct: 392 YDGIHRSLT 400
>ref|XP_006344474.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like isoform X1 [Solanum tuberosum]
Length = 642
Score = 100 bits (248), Expect = 7e-19
Identities = 65/220 (29%), Positives = 108/220 (49%), Gaps = 5/220 (2%)
Frame = +2
Query: 98 HIIYRNSCHHIRQARTLLQVFPPRNYTSVAEAEVQEKNQVLNILKERQWCHETEVKLNGI 277
H I+RN + T L+ F R A +V + V ++ + +W E E +L +
Sbjct: 170 HSIFRNL--KMETDATALKHFYGRMIKDNAMGDVAK--DVSELITKHEWGVEVERQLGEM 225
Query: 278 S-NISEDHIVSALKTLN----PEKALSFFTWXXXXXXXXXXXXVYNAMLKVVCKKTHIQY 442
+S++ ++ LK L P KA SFF W YN +L+V+C++ I+
Sbjct: 226 KLPVSDNFVLRVLKELREIGYPLKAFSFFKWVARNLDFQHTTITYNGILRVLCREESIEE 285
Query: 443 FWKLAKEMQSYGFLMGSYVFSKAMARFQTQGMPEDILKLFMWTIENDKEQPSSRCHKVLF 622
FW + KEM S GF + + K FQ M +D ++L+ ++ + C+ +L
Sbjct: 286 FWGVVKEMMSLGFEIDLDTYIKISRHFQKIKMLKDAVELYELMMDGQFKPSLGECNILLR 345
Query: 623 ALSTNKTPDIDAAYRVIEAFKKGGGSMDKKIYDGLHRCLT 742
+++ + D+D +RV+E F+ G S K IYD +HRCLT
Sbjct: 346 SIAQSHPSDLDLLFRVVEKFEAAGHSRSKIIYDVIHRCLT 385
>gb|EPS62186.1| hypothetical protein M569_12607 [Genlisea aurea]
Length = 627
Score = 100 bits (248), Expect = 7e-19
Identities = 56/173 (32%), Positives = 90/173 (52%), Gaps = 5/173 (2%)
Frame = +2
Query: 242 WCHETEVKLNGIS-NISEDHIVSALKTLNPE----KALSFFTWXXXXXXXXXXXXVYNAM 406
W + E KL ++ +S++ ++ LK L + KA FF W YN +
Sbjct: 216 WGEKVEAKLREMNIAVSDNLVLRILKQLRGQGCAVKAYRFFKWIESSSDFEHTTVTYNGV 275
Query: 407 LKVVCKKTHIQYFWKLAKEMQSYGFLMGSYVFSKAMARFQTQGMPEDILKLFMWTIENDK 586
L+++C++ I FW + EM + GF + + K FQ M ED +KL+ +++
Sbjct: 276 LRILCREESIDEFWNVFSEMNAAGFRLDIDTYVKVSRSFQKNAMFEDGVKLYEHMMDSPY 335
Query: 587 EQPSSRCHKVLFALSTNKTPDIDAAYRVIEAFKKGGGSMDKKIYDGLHRCLTK 745
+ S C+ +L ALS + +PD+ RVIE F GG S+ K +YDG+HR LT+
Sbjct: 336 KPSVSECNYLLQALSRHGSPDLGLIDRVIEKFVAGGNSLSKTLYDGIHRSLTR 388
>ref|XP_006852369.1| hypothetical protein AMTR_s00049p00223850 [Amborella trichopoda]
gi|548855973|gb|ERN13836.1| hypothetical protein
AMTR_s00049p00223850 [Amborella trichopoda]
Length = 570
Score = 99.8 bits (247), Expect = 9e-19
Identities = 53/181 (29%), Positives = 95/181 (52%), Gaps = 3/181 (1%)
Frame = +2
Query: 209 NQVLNILKERQWCHETEVKLNGIS-NISEDHIVSALKTL--NPEKALSFFTWXXXXXXXX 379
N+ + +L + +W E + KL+ + +S+ I+ L+ + +P KAL F+ W
Sbjct: 145 NEAIKLLVDSEWNEEVKCKLSSLGLPLSDSTILRVLEEIRVDPLKALDFYRWVGGQPNFR 204
Query: 380 XXXXVYNAMLKVVCKKTHIQYFWKLAKEMQSYGFLMGSYVFSKAMARFQTQGMPEDILKL 559
YN++++V+ + ++ FW + KEM+ GF M + K RFQ M ++ ++L
Sbjct: 205 HSAITYNSIIRVLGRNDSVKEFWAMVKEMKESGFDMDMDSYVKLSRRFQKWNMLKEAVEL 264
Query: 560 FMWTIENDKEQPSSRCHKVLFALSTNKTPDIDAAYRVIEAFKKGGGSMDKKIYDGLHRCL 739
+ + E + C +L L+T+ P D +RV++ F+ G S+ K IYDG+HR L
Sbjct: 265 YEFMSEGPYQPSVQHCGLLLRKLATSGNPGPDLVFRVVKKFEGAGNSLTKSIYDGIHRSL 324
Query: 740 T 742
T
Sbjct: 325 T 325
>ref|XP_002511313.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223550428|gb|EEF51915.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 627
Score = 97.1 bits (240), Expect = 6e-18
Identities = 51/179 (28%), Positives = 93/179 (51%), Gaps = 3/179 (1%)
Frame = +2
Query: 215 VLNILKERQWCHETEVKLNGISNISEDH-IVSALKTLN--PEKALSFFTWXXXXXXXXXX 385
V++++ +W +E E +L G+ + D+ ++ LK L P KAL FF W
Sbjct: 203 VVSVVSATEWSNEVEKELEGMGILLTDNFVIRVLKELRNYPLKALQFFNWAGKCERYECN 262
Query: 386 XXVYNAMLKVVCKKTHIQYFWKLAKEMQSYGFLMGSYVFSKAMARFQTQGMPEDILKLFM 565
YNA+ +V+ + I FW + +EM++ G M + K +FQ + D +KL+
Sbjct: 263 TITYNAIARVLGRDDSIGEFWSVVEEMKNAGHEMDIDTYIKISRQFQKNKLMGDAVKLYE 322
Query: 566 WTIENDKEQPSSRCHKVLFALSTNKTPDIDAAYRVIEAFKKGGGSMDKKIYDGLHRCLT 742
+ ++ + C +L ++S + PD++ +RV+ ++ G S+ K +YDG+HR LT
Sbjct: 323 FMMDGPFKPSVQDCSMLLRSISASNYPDLNLVFRVVNKYEATGNSLSKAVYDGIHRSLT 381
>ref|XP_006476892.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Citrus sinensis]
Length = 639
Score = 95.1 bits (235), Expect = 2e-17
Identities = 51/180 (28%), Positives = 92/180 (51%), Gaps = 3/180 (1%)
Frame = +2
Query: 215 VLNILKERQWCHETEVKLNGIS-NISEDHIVSALKTLN--PEKALSFFTWXXXXXXXXXX 385
+++++ W + KL + +S++ +++ LK L P KAL FF W
Sbjct: 206 LVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHN 265
Query: 386 XXVYNAMLKVVCKKTHIQYFWKLAKEMQSYGFLMGSYVFSKAMARFQTQGMPEDILKLFM 565
YN +L+V+ + ++ FW + +EM+ G+ M + K +FQ M ED +KLF
Sbjct: 266 TITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFE 325
Query: 566 WTIENDKEQPSSRCHKVLFALSTNKTPDIDAAYRVIEAFKKGGGSMDKKIYDGLHRCLTK 745
+ ++ + C +L ++S+ PD+ +RV ++ G S+ K +YDG+HR LTK
Sbjct: 326 FMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTK 385
>ref|XP_006439927.1| hypothetical protein CICLE_v10019266mg [Citrus clementina]
gi|557542189|gb|ESR53167.1| hypothetical protein
CICLE_v10019266mg [Citrus clementina]
Length = 639
Score = 93.6 bits (231), Expect = 6e-17
Identities = 50/180 (27%), Positives = 92/180 (51%), Gaps = 3/180 (1%)
Frame = +2
Query: 215 VLNILKERQWCHETEVKLNGIS-NISEDHIVSALKTLN--PEKALSFFTWXXXXXXXXXX 385
+++++ W + KL + +S++ +++ LK L P KAL FF W
Sbjct: 206 LVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHN 265
Query: 386 XXVYNAMLKVVCKKTHIQYFWKLAKEMQSYGFLMGSYVFSKAMARFQTQGMPEDILKLFM 565
YN +L+V+ + ++ FW + +EM+ G+ M + K +FQ + ED +KLF
Sbjct: 266 TITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRIMEDAVKLFE 325
Query: 566 WTIENDKEQPSSRCHKVLFALSTNKTPDIDAAYRVIEAFKKGGGSMDKKIYDGLHRCLTK 745
+ ++ + C +L ++S+ PD+ +RV ++ G S+ K +YDG+HR LTK
Sbjct: 326 FMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTK 385
>ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Vitis vinifera]
Length = 631
Score = 93.2 bits (230), Expect = 8e-17
Identities = 54/180 (30%), Positives = 89/180 (49%), Gaps = 3/180 (1%)
Frame = +2
Query: 212 QVLNILKERQWCHETEVKLNGISN-ISEDHIVSALKTLN--PEKALSFFTWXXXXXXXXX 382
+V+ ++ W E E KL + N S++ ++ L+ L P KAL FF W
Sbjct: 204 KVVELVTMSVWSSEVEKKLGELKNSFSDNFVLHVLRELRGYPLKALRFFQWVGECPGYEH 263
Query: 383 XXXVYNAMLKVVCKKTHIQYFWKLAKEMQSYGFLMGSYVFSKAMARFQTQGMPEDILKLF 562
YN + +V+ + I FW + +EM+S G M + K +FQ M ED +KL+
Sbjct: 264 SSITYNVIARVLGRDDSIGEFWSMVEEMKSKGHEMDIDTYIKISRQFQKNKMLEDAVKLY 323
Query: 563 MWTIENDKEQPSSRCHKVLFALSTNKTPDIDAAYRVIEAFKKGGGSMDKKIYDGLHRCLT 742
++ + C +L ++S + PD+ +RV E ++ G S+ K +YDG+HR LT
Sbjct: 324 EIMMDGPYKPSVQDCTMLLRSISLSSNPDLALVFRVTEKYEAVGNSLCKAVYDGIHRSLT 383
>gb|EXB93901.1| hypothetical protein L484_002057 [Morus notabilis]
Length = 628
Score = 92.4 bits (228), Expect = 1e-16
Identities = 53/180 (29%), Positives = 93/180 (51%), Gaps = 3/180 (1%)
Frame = +2
Query: 212 QVLNILKERQWCHETEVKLNGIS-NISEDHIVSALKTLN--PEKALSFFTWXXXXXXXXX 382
+V++++ QW E E +L I ++S++ ++ LK L P KA SFF W
Sbjct: 203 KVVDVVLGLQWSDEVEKQLGKIIVDLSDNIVLRVLKGLRTYPSKASSFFRWVGRYPGYEH 262
Query: 383 XXXVYNAMLKVVCKKTHIQYFWKLAKEMQSYGFLMGSYVFSKAMARFQTQGMPEDILKLF 562
YNA +V+ + I FW + +EM+ G+ + + K +FQ M ED +KL+
Sbjct: 263 NSVTYNAAARVLSRDDSIGEFWGMIEEMKGAGYDLDIDNYIKISRQFQKSKMMEDSVKLY 322
Query: 563 MWTIENDKEQPSSRCHKVLFALSTNKTPDIDAAYRVIEAFKKGGGSMDKKIYDGLHRCLT 742
+ ++ + + C+ +L ++S PD A+RV + ++ G ++ K YDG+HR LT
Sbjct: 323 EFMMDGPFKPSAQDCNLLLRSISAGDNPDCSLAFRVAKKYESTGRTLSKAAYDGIHRSLT 382
>ref|XP_004299145.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 630
Score = 92.0 bits (227), Expect = 2e-16
Identities = 53/184 (28%), Positives = 93/184 (50%), Gaps = 3/184 (1%)
Frame = +2
Query: 200 QEKNQVLNILKERQWCHETEVKLNGIS-NISEDHIVSALKTLN--PEKALSFFTWXXXXX 370
++ +V++++ +W + E +L I +SE +V L+ L P KAL FF W
Sbjct: 199 EDVKKVMDVVLGAEWSDKVEKELGEIDVELSEKFVVRVLRDLRVCPLKALRFFRWVEQCA 258
Query: 371 XXXXXXXVYNAMLKVVCKKTHIQYFWKLAKEMQSYGFLMGSYVFSKAMARFQTQGMPEDI 550
YN M V+ + + I FW + +EM+ G + + K +FQ M ED
Sbjct: 259 GYEHNSVTYNGMSLVLGQASSIGEFWSVIEEMKVAGQELDLDTYIKLSRQFQKSKMVEDA 318
Query: 551 LKLFMWTIENDKEQPSSRCHKVLFALSTNKTPDIDAAYRVIEAFKKGGGSMDKKIYDGLH 730
+KL+ ++ + +L ++S N+ PD+D +RV++ F+ G ++ K +YDG+H
Sbjct: 319 VKLYELMMDGPYKPSVQDVSILLRSISANERPDMDLVFRVVKKFESAGFTLSKAVYDGIH 378
Query: 731 RCLT 742
R LT
Sbjct: 379 RSLT 382
>ref|XP_006290749.1| hypothetical protein CARUB_v10016848mg [Capsella rubella]
gi|565465717|ref|XP_006290750.1| hypothetical protein
CARUB_v10016848mg [Capsella rubella]
gi|482559456|gb|EOA23647.1| hypothetical protein
CARUB_v10016848mg [Capsella rubella]
gi|482559457|gb|EOA23648.1| hypothetical protein
CARUB_v10016848mg [Capsella rubella]
Length = 618
Score = 91.7 bits (226), Expect = 2e-16
Identities = 57/189 (30%), Positives = 93/189 (49%), Gaps = 4/189 (2%)
Frame = +2
Query: 188 EAEVQEKNQVLNILKERQWCHETEVKLNGISNI-SEDHIVSALKTL--NPEKALSFFTWX 358
E V +N +LK W E E +L + + S++ ++ LK L +P KAL+FF W
Sbjct: 191 EMYVVARNVSAAVLKV-DWSCEVEKELQEMKLVLSDNFVIRVLKELRDHPLKALAFFNWV 249
Query: 359 XXXXXXXXXXXV-YNAMLKVVCKKTHIQYFWKLAKEMQSYGFLMGSYVFSKAMARFQTQG 535
V YNA L+V+ + + FW + EM+ G+ M + + +FQ
Sbjct: 250 GGSSSGYQHSTVTYNAALRVLTRPNSVAEFWNVVDEMKIAGYEMDLDTYIRVSRQFQKSR 309
Query: 536 MPEDILKLFMWTIENDKEQPSSRCHKVLFALSTNKTPDIDAAYRVIEAFKKGGGSMDKKI 715
M + +KL+ + ++ + C +L +LS PD+D +RV F+ G S+ K +
Sbjct: 310 MMTEAVKLYEYMMDGPFKPLVHDCSTLLRSLSAGPNPDLDLVFRVSRKFESSGNSLSKAV 369
Query: 716 YDGLHRCLT 742
YDG+HR LT
Sbjct: 370 YDGIHRSLT 378
>ref|XP_006404282.1| hypothetical protein EUTSA_v10010209mg [Eutrema salsugineum]
gi|557105401|gb|ESQ45735.1| hypothetical protein
EUTSA_v10010209mg [Eutrema salsugineum]
Length = 617
Score = 90.1 bits (222), Expect = 7e-16
Identities = 51/177 (28%), Positives = 90/177 (50%), Gaps = 4/177 (2%)
Frame = +2
Query: 224 ILKERQWCHETEVKLNGIS-NISEDHIVSALKTL--NPEKALSFFTWXXXXXXXXXXXXV 394
++ + W +E E KL + +S++ ++ LK L +P KAL+FF W +
Sbjct: 202 LVSKVDWSYEVESKLQDMKLALSDNFVIRVLKELRDHPLKALAFFHWVGGSSSGYKHSTI 261
Query: 395 -YNAMLKVVCKKTHIQYFWKLAKEMQSYGFLMGSYVFSKAMARFQTQGMPEDILKLFMWT 571
YNA L+V+ + + FW + EM+ G + + K + +FQ M + +KL+
Sbjct: 262 TYNAALRVLARPNSVAEFWSVVDEMKVAGHEVDLDTYIKVLRQFQKSRMMIEAVKLYELM 321
Query: 572 IENDKEQPSSRCHKVLFALSTNKTPDIDAAYRVIEAFKKGGGSMDKKIYDGLHRCLT 742
++ + + C +L +LS PD+D +RV ++ G S+ K +YDG+HR LT
Sbjct: 322 MDGPFKPSAQDCSLLLRSLSAGHKPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLT 378
>ref|XP_004515865.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Cicer arietinum]
Length = 641
Score = 90.1 bits (222), Expect = 7e-16
Identities = 52/179 (29%), Positives = 90/179 (50%), Gaps = 3/179 (1%)
Frame = +2
Query: 215 VLNILKERQWCHETEVKLNGIS-NISEDHIVSALKTLN--PEKALSFFTWXXXXXXXXXX 385
V+ I+ +W + E KL+ + +S++ ++ LK L P KA FF W
Sbjct: 206 VVGIVSGSEWDDKVENKLSELKIKLSDNFVIRVLKELRNCPLKAYKFFQWVGKQSSYQLN 265
Query: 386 XXVYNAMLKVVCKKTHIQYFWKLAKEMQSYGFLMGSYVFSKAMARFQTQGMPEDILKLFM 565
YNA+ +V+ K I+ FW + +EM+S G + + K + Q M ED +KL+
Sbjct: 266 TVTYNAVARVLAKMDSIEEFWSILEEMKSVGHQLDLDTYIKISRQLQKNRMMEDAVKLYE 325
Query: 566 WTIENDKEQPSSRCHKVLFALSTNKTPDIDAAYRVIEAFKKGGGSMDKKIYDGLHRCLT 742
+++ + C +L +S + P+ID +RV + F+ G ++ K +YD +HR LT
Sbjct: 326 LMMDSLYKPTVVDCVVLLRTISASDKPNIDLVFRVAKKFESTGYTISKVVYDSIHRSLT 384
Score = 57.4 bits (137), Expect = 5e-06
Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 3/120 (2%)
Frame = +2
Query: 209 NQVLNILKERQWCHETEVKL-NGISNISEDHIVSALKTL--NPEKALSFFTWXXXXXXXX 379
+ +L ++ W + E +L N S+++ + +V LK L NPEKA SFF W
Sbjct: 67 HSILELVYSNDWSQDLEHELENCRSSLTHETVVYVLKRLDKNPEKAFSFFNWVSKKEWFM 126
Query: 380 XXXXVYNAMLKVVCKKTHIQYFWKLAKEMQSYGFLMGSYVFSKAMARFQTQGMPEDILKL 559
VY+ +++V+ + ++ FW + M+ GF + + F+ Q M D++ L
Sbjct: 127 ASSSVYSLIIRVLANQETMKQFWITLRTMKEKGFYLDEETYLTISVGFKKQKMNSDVVAL 186
>ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Glycine max]
Length = 635
Score = 89.4 bits (220), Expect = 1e-15
Identities = 50/181 (27%), Positives = 90/181 (49%), Gaps = 3/181 (1%)
Frame = +2
Query: 209 NQVLNILKERQWCHETEVKLNGIS-NISEDHIVSALKTLN--PEKALSFFTWXXXXXXXX 379
+ V+ I+ +W E +L + +S++ ++ LK L P KA FF W
Sbjct: 202 SNVVGIISRSEWGDEVVGELAKLEIQLSDNFVIRVLKELRKTPLKAYKFFHWVGKQSGYE 261
Query: 380 XXXXVYNAMLKVVCKKTHIQYFWKLAKEMQSYGFLMGSYVFSKAMARFQTQGMPEDILKL 559
YNA+ +V+ + I+ FW + +EM+ G + + K + Q M ED +KL
Sbjct: 262 HDTVTYNAVARVLPRAESIEEFWSVIEEMKRVGHELDIDTYIKITRQLQRNRMMEDAVKL 321
Query: 560 FMWTIENDKEQPSSRCHKVLFALSTNKTPDIDAAYRVIEAFKKGGGSMDKKIYDGLHRCL 739
+ ++ + C+ +L ++S N P++D +RV + ++ G ++ K IYDG+HR L
Sbjct: 322 YELMMDGSCKPLVQDCNMLLKSISANDKPNLDLVFRVAKKYESTGHTLSKAIYDGIHRSL 381
Query: 740 T 742
T
Sbjct: 382 T 382
>ref|XP_002877605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297323443|gb|EFH53864.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 618
Score = 88.2 bits (217), Expect = 3e-15
Identities = 52/177 (29%), Positives = 89/177 (50%), Gaps = 4/177 (2%)
Frame = +2
Query: 224 ILKERQWCHETEVKLNGISNI-SEDHIVSALKTL--NPEKALSFFTWXXXXXXXXXXXXV 394
++ + W E E +L ++ + S++ ++ LK L +P KAL+FF W V
Sbjct: 202 VVTKVDWSCEVERELQEMNLVLSDNFVIRVLKELREHPLKALAFFHWVGGSSSGYQHSTV 261
Query: 395 -YNAMLKVVCKKTHIQYFWKLAKEMQSYGFLMGSYVFSKAMARFQTQGMPEDILKLFMWT 571
YNA L+V+ + + FW + EM++ G M + K +FQ M + +KL+ +
Sbjct: 262 TYNAALRVLARPNSVAEFWSVVDEMKTAGHEMDLDTYIKVSRQFQKSRMITETVKLYEYM 321
Query: 572 IENDKEQPSSRCHKVLFALSTNKTPDIDAAYRVIEAFKKGGGSMDKKIYDGLHRCLT 742
++ + C +L LS PD+D +RV ++ G S+ K +YDG+HR LT
Sbjct: 322 MDGPFKPSIQDCSLLLRYLSARPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLT 378
>ref|NP_190408.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207690|sp|Q9STK5.1|PP269_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g48250, chloroplastic; Flags: Precursor
gi|4678363|emb|CAB41173.1| putative protein [Arabidopsis
thaliana] gi|332644870|gb|AEE78391.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 87.8 bits (216), Expect = 3e-15
Identities = 52/183 (28%), Positives = 91/183 (49%), Gaps = 6/183 (3%)
Frame = +2
Query: 212 QVLNILKERQWCHETEVKLNGISNI-SEDHIVSALKTL--NPEKALSFFTWXXXXXXXXX 382
+V ++ + W E E +L + + S++ ++ LK L +P KAL+FF W
Sbjct: 199 EVSAVVTKGDWSCEVERELQEMKLVLSDNFVIRVLKELREHPLKALAFFHWVGGGGSSSG 258
Query: 383 XXX---VYNAMLKVVCKKTHIQYFWKLAKEMQSYGFLMGSYVFSKAMARFQTQGMPEDIL 553
YNA L+V+ + + FW + EM++ G+ M + K +FQ M + +
Sbjct: 259 YQHSTVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETV 318
Query: 554 KLFMWTIENDKEQPSSRCHKVLFALSTNKTPDIDAAYRVIEAFKKGGGSMDKKIYDGLHR 733
KL+ + ++ + C +L LS + PD+D +RV ++ G S+ K +YDG+HR
Sbjct: 319 KLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHR 378
Query: 734 CLT 742
LT
Sbjct: 379 SLT 381
>gb|ESW27478.1| hypothetical protein PHAVU_003G205300g [Phaseolus vulgaris]
Length = 631
Score = 87.4 bits (215), Expect = 4e-15
Identities = 49/180 (27%), Positives = 88/180 (48%), Gaps = 3/180 (1%)
Frame = +2
Query: 212 QVLNILKERQWCHETEVKLNGIS-NISEDHIVSALKTLN--PEKALSFFTWXXXXXXXXX 382
+V+ I+ +W E +L + +S++ ++ LK L P K+ FF W
Sbjct: 201 KVVGIISVSEWGEEVMGELAKLKIQLSDNFVIRVLKDLRNTPLKSYKFFHWVGTQPGYEH 260
Query: 383 XXXVYNAMLKVVCKKTHIQYFWKLAKEMQSYGFLMGSYVFSKAMARFQTQGMPEDILKLF 562
YNA+ V+ + IQ FW + +E++S G + + K + Q M ED +KL+
Sbjct: 261 NTVTYNAVASVLARNDSIQEFWSVIEELKSVGHELDIDTYIKISRQLQKNRMMEDAVKLY 320
Query: 563 MWTIENDKEQPSSRCHKVLFALSTNKTPDIDAAYRVIEAFKKGGGSMDKKIYDGLHRCLT 742
++ + C +L ++S + P++D +RV ++ G ++ K IYDG+HR LT
Sbjct: 321 EHMMDGSYKPLVQDCSLLLKSISASDKPNLDLVFRVARKYESTGHTLSKAIYDGIHRSLT 380
>ref|XP_003549820.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Glycine max]
Length = 635
Score = 86.3 bits (212), Expect = 1e-14
Identities = 49/180 (27%), Positives = 88/180 (48%), Gaps = 3/180 (1%)
Frame = +2
Query: 212 QVLNILKERQWCHETEVKLNGIS-NISEDHIVSALKTLN--PEKALSFFTWXXXXXXXXX 382
+V++I+ +W E L + +S++ + LK L P KA FF W
Sbjct: 207 KVVDIISGSEWGDEVMSNLAKLEIRMSDNFVTRVLKELRNCPLKAYEFFNWVGKQSGYEH 266
Query: 383 XXXVYNAMLKVVCKKTHIQYFWKLAKEMQSYGFLMGSYVFSKAMARFQTQGMPEDILKLF 562
YNA+ +V+ I+ FW + +EM+S G + + K + Q M ED +KL+
Sbjct: 267 DTVTYNAIARVLASTDSIEKFWSVIEEMKSVGHELDIDTYIKISKKLQKNKMMEDAVKLY 326
Query: 563 MWTIENDKEQPSSRCHKVLFALSTNKTPDIDAAYRVIEAFKKGGGSMDKKIYDGLHRCLT 742
T++ + C +L ++S + P++D +RV + ++ ++ K IYDG+HR L+
Sbjct: 327 ELTMDGSYKPSVKDCSLLLKSISASDDPNLDLVFRVSKKYESTWHTLSKAIYDGIHRSLS 386