BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00023076
         (473 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303703.2| RNA recognition motif-containing family prot...   143   3e-32
ref|XP_006470744.1| PREDICTED: multiple RNA-binding domain-conta...   142   3e-32
ref|XP_006470743.1| PREDICTED: multiple RNA-binding domain-conta...   140   1e-31
ref|XP_002275485.2| PREDICTED: probable RNA-binding protein 19-l...   139   3e-31
gb|EOY27481.1| Nucleotide binding,nucleic acid binding,RNA bindi...   139   4e-31
ref|NP_001146285.1| uncharacterized protein LOC100279860 [Zea ma...   137   2e-30
ref|NP_193696.3| nucleotide/nucleic acid binding protein [Arabid...   136   2e-30
ref|XP_002448510.1| hypothetical protein SORBIDRAFT_06g028205 [S...   135   6e-30
ref|XP_001760318.1| predicted protein [Physcomitrella patens] gi...   135   6e-30
gb|EAY95508.1| hypothetical protein OsI_17353 [Oryza sativa Indi...   132   5e-29
emb|CAE03574.2| OSJNBa0085I10.19 [Oryza sativa Japonica Group] g...   132   5e-29
ref|XP_004976774.1| PREDICTED: multiple RNA-binding domain-conta...   132   6e-29
ref|XP_006653757.1| PREDICTED: probable RNA-binding protein 19-l...   131   8e-29
ref|XP_006363169.1| PREDICTED: multiple RNA-binding domain-conta...   131   1e-28
gb|ESW33456.1| hypothetical protein PHAVU_001G070900g [Phaseolus...   131   1e-28
ref|XP_004232621.1| PREDICTED: multiple RNA-binding domain-conta...   131   1e-28
gb|EMT15961.1| Multiple RNA-binding domain-containing protein 1 ...   129   4e-28
ref|XP_003581646.1| PREDICTED: probable RNA-binding protein 19-l...   129   4e-28
ref|XP_004493655.1| PREDICTED: multiple RNA-binding domain-conta...   128   7e-28
gb|EMS55781.1| Multiple RNA-binding domain-containing protein 1 ...   128   7e-28

>ref|XP_002303703.2| RNA recognition motif-containing family protein [Populus
           trichocarpa] gi|550343191|gb|EEE78682.2| RNA recognition
           motif-containing family protein [Populus trichocarpa]
          Length = 841

 Score =  143 bits (360), Expect = 3e-32
 Identities = 65/99 (65%), Positives = 82/99 (82%)
 Frame = -1

Query: 311 MSRICVKNLPPKFTEDQLRNHFSKKGEVTDAKIIRTTDGRSRQFGFVGYRTEEEANNAVK 132
           MSRICVKNLP    ED+LR +FS+KGEVTDAKI+RT DG+SRQF FVG+RTE EA +A+K
Sbjct: 1   MSRICVKNLPKYVAEDRLREYFSQKGEVTDAKIMRTADGKSRQFAFVGFRTEREAEDAIK 60

Query: 131 YFQNTYLNTLKISCEVAYKVGAKDVPRPWSQYSQQKAKE 15
           YF  +YL+T +I CE+A KVG  D+PRPWS+YS+QK ++
Sbjct: 61  YFNKSYLDTCRIVCEIARKVGDPDIPRPWSRYSKQKEEK 99


>ref|XP_006470744.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
           isoform X2 [Citrus sinensis]
          Length = 843

 Score =  142 bits (359), Expect = 3e-32
 Identities = 64/99 (64%), Positives = 83/99 (83%)
 Frame = -1

Query: 311 MSRICVKNLPPKFTEDQLRNHFSKKGEVTDAKIIRTTDGRSRQFGFVGYRTEEEANNAVK 132
           MSRICVKNLP   TED+LR+ FS+KGE+TDAK++RT DG+SRQF F+G+RTE+EA  A+K
Sbjct: 1   MSRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIK 60

Query: 131 YFQNTYLNTLKISCEVAYKVGAKDVPRPWSQYSQQKAKE 15
           YF  +YL+T +ISCE+A KVG  ++PRPWS+YS +K KE
Sbjct: 61  YFNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKE 99


>ref|XP_006470743.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
           isoform X1 [Citrus sinensis]
          Length = 845

 Score =  140 bits (354), Expect = 1e-31
 Identities = 63/98 (64%), Positives = 82/98 (83%)
 Frame = -1

Query: 308 SRICVKNLPPKFTEDQLRNHFSKKGEVTDAKIIRTTDGRSRQFGFVGYRTEEEANNAVKY 129
           SRICVKNLP   TED+LR+ FS+KGE+TDAK++RT DG+SRQF F+G+RTE+EA  A+KY
Sbjct: 4   SRICVKNLPKYVTEDRLRDFFSQKGEITDAKLMRTKDGKSRQFAFIGFRTEQEAEEAIKY 63

Query: 128 FQNTYLNTLKISCEVAYKVGAKDVPRPWSQYSQQKAKE 15
           F  +YL+T +ISCE+A KVG  ++PRPWS+YS +K KE
Sbjct: 64  FNKSYLDTCRISCEIARKVGDPNMPRPWSRYSLKKEKE 101


>ref|XP_002275485.2| PREDICTED: probable RNA-binding protein 19-like [Vitis vinifera]
          Length = 983

 Score =  139 bits (351), Expect = 3e-31
 Identities = 63/105 (60%), Positives = 85/105 (80%), Gaps = 3/105 (2%)
 Frame = -1

Query: 308 SRICVKNLPPKFTEDQLRNHFSKKGEVTDAKIIRTTDGRSRQFGFVGYRTEEEANNAVKY 129
           SRICVKNLP    ED+LR+HFS+KGE+TDAK++RT +G+SRQF F+G+RTE+EA  A+K+
Sbjct: 119 SRICVKNLPKYVAEDRLRDHFSQKGEITDAKLMRTKEGKSRQFAFIGFRTEQEAEEALKF 178

Query: 128 FQNTYLNTLKISCEVAYKVGAKDVPRPWSQYS---QQKAKEKENK 3
           F N+YL+T +I+CE+A KVG  D+PRPWS+YS   + K+ E E K
Sbjct: 179 FNNSYLDTCRITCEIARKVGDPDIPRPWSRYSLKKEDKSTEVEKK 223


>gb|EOY27481.1| Nucleotide binding,nucleic acid binding,RNA binding [Theobroma
           cacao]
          Length = 971

 Score =  139 bits (350), Expect = 4e-31
 Identities = 65/111 (58%), Positives = 83/111 (74%)
 Frame = -1

Query: 356 RKEQENTIYNI**KKMSRICVKNLPPKFTEDQLRNHFSKKGEVTDAKIIRTTDGRSRQFG 177
           R +Q N+  N   K MSRICVKNLP    ED+LR  FS+KGE+TD K++RT DG+SRQF 
Sbjct: 126 RSKQLNSFQN---KNMSRICVKNLPKHVAEDRLREFFSQKGEITDTKLMRTKDGKSRQFA 182

Query: 176 FVGYRTEEEANNAVKYFQNTYLNTLKISCEVAYKVGAKDVPRPWSQYSQQK 24
           F+GYRTE+EA  A+KYF  +YL+T +I CE+A KVG  + PRPWS+YS +K
Sbjct: 183 FIGYRTEQEAEEAIKYFNKSYLDTSRIICEIARKVGDPNTPRPWSRYSSKK 233


>ref|NP_001146285.1| uncharacterized protein LOC100279860 [Zea mays]
           gi|219886507|gb|ACL53628.1| unknown [Zea mays]
           gi|413919482|gb|AFW59414.1| hypothetical protein
           ZEAMMB73_904714 [Zea mays]
          Length = 881

 Score =  137 bits (344), Expect = 2e-30
 Identities = 65/105 (61%), Positives = 83/105 (79%), Gaps = 4/105 (3%)
 Frame = -1

Query: 308 SRICVKNLPPKFTEDQLRNHFSKKGEVTDAKIIRTTDGRSRQFGFVGYRTEEEANNAVKY 129
           SR+CVKNLP    E +LR+ FS+KGEVTDAK+IRT DG+SRQF F+GYRT EEA+ A+KY
Sbjct: 3   SRLCVKNLPKGADERRLRDVFSRKGEVTDAKVIRTKDGKSRQFAFIGYRTNEEADEALKY 62

Query: 128 FQNTYLNTLKISCEVAYKVGAKDVPRPWSQYSQQK----AKEKEN 6
           F NTY++T KI+CEVA K+G  D PRPWS++S +K    +K+K N
Sbjct: 63  FNNTYIDTCKITCEVARKIGDPDAPRPWSRHSLKKSEYGSKDKNN 107


>ref|NP_193696.3| nucleotide/nucleic acid binding protein [Arabidopsis thaliana]
           gi|332658804|gb|AEE84204.1| nucleotide/nucleic acid
           binding protein [Arabidopsis thaliana]
          Length = 816

 Score =  136 bits (343), Expect = 2e-30
 Identities = 61/99 (61%), Positives = 80/99 (80%)
 Frame = -1

Query: 311 MSRICVKNLPPKFTEDQLRNHFSKKGEVTDAKIIRTTDGRSRQFGFVGYRTEEEANNAVK 132
           MSRICVKNLP    EDQLR+HFS+KGE+TDAK++R+ DG+SRQFGF+G+R+ +EA  A+K
Sbjct: 1   MSRICVKNLPKHVKEDQLRDHFSQKGEITDAKLMRSNDGKSRQFGFIGFRSAQEAQQAIK 60

Query: 131 YFQNTYLNTLKISCEVAYKVGAKDVPRPWSQYSQQKAKE 15
           YF NTYL T  I  E+A+KVG ++ PRPWS+ S +K +E
Sbjct: 61  YFNNTYLGTSLIIVEIAHKVGDENAPRPWSRLSHKKEEE 99


>ref|XP_002448510.1| hypothetical protein SORBIDRAFT_06g028205 [Sorghum bicolor]
           gi|241939693|gb|EES12838.1| hypothetical protein
           SORBIDRAFT_06g028205 [Sorghum bicolor]
          Length = 184

 Score =  135 bits (340), Expect = 6e-30
 Identities = 64/105 (60%), Positives = 81/105 (77%), Gaps = 4/105 (3%)
 Frame = -1

Query: 308 SRICVKNLPPKFTEDQLRNHFSKKGEVTDAKIIRTTDGRSRQFGFVGYRTEEEANNAVKY 129
           SR+CVKNLP    E +LR  FS+KGEVTDAK+IRT DG+SRQF F+GYRT E+A  A+KY
Sbjct: 15  SRLCVKNLPKGVDERRLREVFSRKGEVTDAKVIRTKDGKSRQFAFIGYRTNEDAEEALKY 74

Query: 128 FQNTYLNTLKISCEVAYKVGAKDVPRPWSQYSQQK----AKEKEN 6
           F NTY++T KI+CEVA K+G  D PRPWS++S +K    +K+K N
Sbjct: 75  FNNTYIDTCKITCEVARKIGDPDAPRPWSRHSLKKPEYGSKDKNN 119


>ref|XP_001760318.1| predicted protein [Physcomitrella patens]
           gi|162688332|gb|EDQ74709.1| predicted protein
           [Physcomitrella patens]
          Length = 878

 Score =  135 bits (340), Expect = 6e-30
 Identities = 62/99 (62%), Positives = 80/99 (80%)
 Frame = -1

Query: 308 SRICVKNLPPKFTEDQLRNHFSKKGEVTDAKIIRTTDGRSRQFGFVGYRTEEEANNAVKY 129
           SRICVKNLP   TE++LR HF+ KGEVTDAKIIRT DGR+RQFGFVGYRTEEEA +A KY
Sbjct: 7   SRICVKNLPRHVTEERLREHFAAKGEVTDAKIIRTRDGRTRQFGFVGYRTEEEAKDAAKY 66

Query: 128 FQNTYLNTLKISCEVAYKVGAKDVPRPWSQYSQQKAKEK 12
           F  ++ +T +++CE+A  VG  ++PRPWS++S+  +K K
Sbjct: 67  FHRSFFDTSRLTCELAQAVGDPNLPRPWSRHSEGSSKFK 105


>gb|EAY95508.1| hypothetical protein OsI_17353 [Oryza sativa Indica Group]
          Length = 904

 Score =  132 bits (332), Expect = 5e-29
 Identities = 61/95 (64%), Positives = 76/95 (80%)
 Frame = -1

Query: 308 SRICVKNLPPKFTEDQLRNHFSKKGEVTDAKIIRTTDGRSRQFGFVGYRTEEEANNAVKY 129
           SR+CVKNLP    E +LR  FS+KGEVTDAK+IRT DG+SRQF FVG+RT EEA  A+KY
Sbjct: 23  SRLCVKNLPKGADEGRLREVFSRKGEVTDAKVIRTKDGKSRQFAFVGFRTNEEAEEALKY 82

Query: 128 FQNTYLNTLKISCEVAYKVGAKDVPRPWSQYSQQK 24
           F NTY++T KI+CEVA K+G  + PRPWS++S +K
Sbjct: 83  FNNTYIDTCKITCEVARKIGDPEAPRPWSRHSLKK 117


>emb|CAE03574.2| OSJNBa0085I10.19 [Oryza sativa Japonica Group]
           gi|38568013|emb|CAE05198.3| OSJNBa0070C17.5 [Oryza
           sativa Japonica Group]
          Length = 904

 Score =  132 bits (332), Expect = 5e-29
 Identities = 61/95 (64%), Positives = 76/95 (80%)
 Frame = -1

Query: 308 SRICVKNLPPKFTEDQLRNHFSKKGEVTDAKIIRTTDGRSRQFGFVGYRTEEEANNAVKY 129
           SR+CVKNLP    E +LR  FS+KGEVTDAK+IRT DG+SRQF FVG+RT EEA  A+KY
Sbjct: 23  SRLCVKNLPKGADEGRLREVFSRKGEVTDAKVIRTKDGKSRQFAFVGFRTNEEAEEALKY 82

Query: 128 FQNTYLNTLKISCEVAYKVGAKDVPRPWSQYSQQK 24
           F NTY++T KI+CEVA K+G  + PRPWS++S +K
Sbjct: 83  FNNTYIDTCKITCEVARKIGDPEAPRPWSRHSLKK 117


>ref|XP_004976774.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
           [Setaria italica]
          Length = 883

 Score =  132 bits (331), Expect = 6e-29
 Identities = 60/95 (63%), Positives = 76/95 (80%)
 Frame = -1

Query: 308 SRICVKNLPPKFTEDQLRNHFSKKGEVTDAKIIRTTDGRSRQFGFVGYRTEEEANNAVKY 129
           SR+CVKNLP    E +LR  FS+KGEVTDAK+IRT DG+SRQF F+G+RT E+A  A+KY
Sbjct: 3   SRLCVKNLPKGADERRLREVFSRKGEVTDAKVIRTKDGKSRQFAFIGFRTNEDAEEALKY 62

Query: 128 FQNTYLNTLKISCEVAYKVGAKDVPRPWSQYSQQK 24
           F NTY++T KI+CEVA K+G  D PRPWS++S +K
Sbjct: 63  FNNTYIDTCKITCEVARKIGDPDAPRPWSRHSLKK 97


>ref|XP_006653757.1| PREDICTED: probable RNA-binding protein 19-like [Oryza brachyantha]
          Length = 928

 Score =  131 bits (330), Expect = 8e-29
 Identities = 61/95 (64%), Positives = 75/95 (78%)
 Frame = -1

Query: 308 SRICVKNLPPKFTEDQLRNHFSKKGEVTDAKIIRTTDGRSRQFGFVGYRTEEEANNAVKY 129
           SR+CVKNLP    E +LR  FS+KGEVTDAK+IRT DG+SRQF FVG+RT EEA  A++Y
Sbjct: 51  SRLCVKNLPKGADERRLREVFSRKGEVTDAKVIRTKDGKSRQFAFVGFRTNEEAEEALEY 110

Query: 128 FQNTYLNTLKISCEVAYKVGAKDVPRPWSQYSQQK 24
           F NTY+ T KI+CEVA K+G  D PRPWS++S +K
Sbjct: 111 FNNTYIETCKITCEVARKIGDPDAPRPWSRHSLKK 145


>ref|XP_006363169.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
           [Solanum tuberosum]
          Length = 838

 Score =  131 bits (329), Expect = 1e-28
 Identities = 57/103 (55%), Positives = 83/103 (80%)
 Frame = -1

Query: 311 MSRICVKNLPPKFTEDQLRNHFSKKGEVTDAKIIRTTDGRSRQFGFVGYRTEEEANNAVK 132
           MSR+CVKNLP    ED+LR  FS+KGEVTDAK++RT+DG+SRQFGFVG+RTE+EA  A+K
Sbjct: 1   MSRLCVKNLPKYVAEDRLREFFSQKGEVTDAKLMRTSDGKSRQFGFVGFRTEQEAEEAIK 60

Query: 131 YFQNTYLNTLKISCEVAYKVGAKDVPRPWSQYSQQKAKEKENK 3
           YF  +++++ +I CE+A K+G  ++PRPWS+++ +K +   N+
Sbjct: 61  YFDKSFMDSSRIICEIARKIGDPNIPRPWSRHTLKKQEILTNE 103


>gb|ESW33456.1| hypothetical protein PHAVU_001G070900g [Phaseolus vulgaris]
          Length = 847

 Score =  131 bits (329), Expect = 1e-28
 Identities = 57/96 (59%), Positives = 78/96 (81%)
 Frame = -1

Query: 311 MSRICVKNLPPKFTEDQLRNHFSKKGEVTDAKIIRTTDGRSRQFGFVGYRTEEEANNAVK 132
           MSRICVKNLP    ED+LR  FS+KG +TD +++RT DG+SRQF F+GYRTE EA+ A++
Sbjct: 1   MSRICVKNLPKHVAEDELREFFSEKGIITDVRLMRTKDGKSRQFAFIGYRTENEAHEAIR 60

Query: 131 YFQNTYLNTLKISCEVAYKVGAKDVPRPWSQYSQQK 24
           YF N+YL T KI+CEVA K+G +++PRPW ++S++K
Sbjct: 61  YFNNSYLRTSKIACEVARKLGDENLPRPWGRHSKKK 96


>ref|XP_004232621.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
           [Solanum lycopersicum]
          Length = 839

 Score =  131 bits (329), Expect = 1e-28
 Identities = 57/103 (55%), Positives = 83/103 (80%)
 Frame = -1

Query: 311 MSRICVKNLPPKFTEDQLRNHFSKKGEVTDAKIIRTTDGRSRQFGFVGYRTEEEANNAVK 132
           MSR+CVKNLP    ED+LR  FS+KGEVTDAK++RT+DG+SRQFGFVG+RTE+EA  A+K
Sbjct: 1   MSRLCVKNLPKYVAEDRLREFFSQKGEVTDAKLMRTSDGKSRQFGFVGFRTEQEAEEAIK 60

Query: 131 YFQNTYLNTLKISCEVAYKVGAKDVPRPWSQYSQQKAKEKENK 3
           YF  +++++ +I CE+A K+G  ++PRPWS+++ +K +   N+
Sbjct: 61  YFDKSFMDSSRIICEIARKIGDPNIPRPWSRHTLKKQEILTNE 103


>gb|EMT15961.1| Multiple RNA-binding domain-containing protein 1 [Aegilops
           tauschii]
          Length = 979

 Score =  129 bits (324), Expect = 4e-28
 Identities = 61/108 (56%), Positives = 80/108 (74%), Gaps = 4/108 (3%)
 Frame = -1

Query: 317 KKMSRICVKNLPPKFTEDQLRNHFSKKGEVTDAKIIRTTDGRSRQFGFVGYRTEEEANNA 138
           ++ SR+CVKNLP    E +LR  FS+KGEVTDAK+IRT DG+SR   F+G+RT EEA  A
Sbjct: 94  RRSSRLCVKNLPKGADEKRLREVFSRKGEVTDAKVIRTKDGKSRHLAFIGFRTNEEAAEA 153

Query: 137 VKYFQNTYLNTLKISCEVAYKVGAKDVPRPWSQYSQQK----AKEKEN 6
           + YF NTY++T KI+CE+A K+G  D PRPWS++S +K    AK+K N
Sbjct: 154 LNYFNNTYIDTSKITCEIARKIGDPDAPRPWSRHSLKKPEYNAKDKTN 201


>ref|XP_003581646.1| PREDICTED: probable RNA-binding protein 19-like [Brachypodium
           distachyon]
          Length = 894

 Score =  129 bits (324), Expect = 4e-28
 Identities = 59/97 (60%), Positives = 76/97 (78%)
 Frame = -1

Query: 314 KMSRICVKNLPPKFTEDQLRNHFSKKGEVTDAKIIRTTDGRSRQFGFVGYRTEEEANNAV 135
           + SR+CVKNLP    E +LR  FS+KGEVTDAK+IRT DG+SR F F+G+RT E+A  A+
Sbjct: 22  RSSRLCVKNLPKGADEKRLREVFSRKGEVTDAKVIRTKDGKSRHFAFIGFRTNEDAVEAL 81

Query: 134 KYFQNTYLNTLKISCEVAYKVGAKDVPRPWSQYSQQK 24
           KYF NTY++T KI+CEVA K+G  D PRPWS++S +K
Sbjct: 82  KYFNNTYIDTSKITCEVARKIGDPDAPRPWSRHSLKK 118


>ref|XP_004493655.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
           [Cicer arietinum]
          Length = 848

 Score =  128 bits (322), Expect = 7e-28
 Identities = 57/96 (59%), Positives = 78/96 (81%)
 Frame = -1

Query: 311 MSRICVKNLPPKFTEDQLRNHFSKKGEVTDAKIIRTTDGRSRQFGFVGYRTEEEANNAVK 132
           MSRICVKNLP    ED+LR  FS+KGEVTD K++RT  G+SRQF F+G+RT++EA  A++
Sbjct: 1   MSRICVKNLPKYVVEDRLRELFSQKGEVTDVKLMRTKKGQSRQFAFIGFRTDQEAQEAIR 60

Query: 131 YFQNTYLNTLKISCEVAYKVGAKDVPRPWSQYSQQK 24
           YF  +YL+TL+I+CEVA K+G  ++PRPWS++S +K
Sbjct: 61  YFNRSYLDTLRITCEVAQKLGDANLPRPWSRHSTKK 96


>gb|EMS55781.1| Multiple RNA-binding domain-containing protein 1 [Triticum urartu]
          Length = 1007

 Score =  128 bits (322), Expect = 7e-28
 Identities = 61/105 (58%), Positives = 78/105 (74%), Gaps = 4/105 (3%)
 Frame = -1

Query: 308 SRICVKNLPPKFTEDQLRNHFSKKGEVTDAKIIRTTDGRSRQFGFVGYRTEEEANNAVKY 129
           SR+CVKNLP    E +LR  FS+KGEVTDAK+IRT DG+SR   F+G+RT EEA  A+ Y
Sbjct: 125 SRLCVKNLPKGADEKRLREVFSRKGEVTDAKVIRTKDGKSRHLAFIGFRTNEEAAEALNY 184

Query: 128 FQNTYLNTLKISCEVAYKVGAKDVPRPWSQYSQQK----AKEKEN 6
           F NTY++T KI+CE+A K+G  D PRPWS++S +K    AK+K N
Sbjct: 185 FNNTYIDTSKITCEIARKIGDPDAPRPWSRHSLKKPEYNAKDKSN 229