BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00023014
         (408 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE76485.1| unknown [Picea sitchensis]                             118   9e-25
gb|EOY09233.1| 3'-5'-exoribonuclease family protein [Theobroma c...   110   3e-22
ref|XP_006381009.1| hypothetical protein POPTR_0006s04970g [Popu...   109   4e-22
ref|XP_002308947.1| 3' exoribonuclease domain 1-containing famil...   109   4e-22
ref|XP_001755996.1| predicted protein [Physcomitrella patens] gi...   109   4e-22
ref|XP_006489986.1| PREDICTED: exosome complex component RRP43-l...   108   1e-21
ref|XP_006373782.1| hypothetical protein POPTR_0016s05590g [Popu...   106   4e-21
emb|CBI29839.3| unnamed protein product [Vitis vinifera]              106   4e-21
ref|XP_002284088.1| PREDICTED: exosome complex component RRP43-l...   106   4e-21
ref|XP_002322717.1| 3' exoribonuclease domain 1-containing famil...   106   4e-21
gb|EXC00696.1| hypothetical protein L484_001482 [Morus notabilis]     105   8e-21
ref|XP_006302607.1| hypothetical protein CARUB_v10020713mg [Caps...   104   1e-20
ref|XP_006421389.1| hypothetical protein CICLE_v10005512mg [Citr...   104   1e-20
ref|XP_004149399.1| PREDICTED: exosome complex component RRP43-l...   103   2e-20
gb|EPS60631.1| hypothetical protein M569_14171, partial [Genlise...   102   4e-20
ref|XP_006596183.1| PREDICTED: exosome complex component RRP43-l...   102   7e-20
ref|XP_003544676.1| PREDICTED: exosome complex component RRP43-l...   102   7e-20
ref|XP_002532079.1| exosome complex exonuclease rrp43, putative ...   101   9e-20
gb|ESW05464.1| hypothetical protein PHAVU_011G181200g [Phaseolus...   101   1e-19
ref|XP_006850813.1| hypothetical protein AMTR_s00025p00117140 [A...   100   2e-19

>gb|ADE76485.1| unknown [Picea sitchensis]
          Length = 302

 Score =  118 bits (295), Expect = 9e-25
 Identities = 58/84 (69%), Positives = 70/84 (83%)
 Frame = +1

Query: 151 MAMGSNMEEDLELEAFRRLYPTQFYEKYLSQNVRPDARPLARARETDLQLGTVATSDGSA 330
           MA  + +  ++E+EAFRRLYP QFYE++L+ NVRPDARPL RAR T L LGTV T+DGSA
Sbjct: 1   MASQAALAGEIEVEAFRRLYPLQFYERHLNDNVRPDARPLGRARATSLALGTVPTADGSA 60

Query: 331 MAKIGNTAMLAGVKLEVMTPSEES 402
           MAKIG+T MLAGVKLEVMTP+ E+
Sbjct: 61  MAKIGHTTMLAGVKLEVMTPAAEA 84


>gb|EOY09233.1| 3'-5'-exoribonuclease family protein [Theobroma cacao]
          Length = 302

 Score =  110 bits (274), Expect = 3e-22
 Identities = 48/81 (59%), Positives = 71/81 (87%)
 Frame = +1

Query: 166 NMEEDLELEAFRRLYPTQFYEKYLSQNVRPDARPLARARETDLQLGTVATSDGSAMAKIG 345
           ++  ++E++AFRRL+P +FYEK+LS+++RPDARPL RAR+T + LG VA+++GSA+AKIG
Sbjct: 9   DLSTEVEVDAFRRLFPLRFYEKHLSESIRPDARPLGRARDTTIALGAVASANGSALAKIG 68

Query: 346 NTAMLAGVKLEVMTPSEESPE 408
           +T MLA +K+EVMTPS E+P+
Sbjct: 69  STTMLAAIKMEVMTPSTETPD 89


>ref|XP_006381009.1| hypothetical protein POPTR_0006s04970g [Populus trichocarpa]
           gi|550335486|gb|ERP58806.1| hypothetical protein
           POPTR_0006s04970g [Populus trichocarpa]
          Length = 303

 Score =  109 bits (272), Expect = 4e-22
 Identities = 48/81 (59%), Positives = 70/81 (86%)
 Frame = +1

Query: 166 NMEEDLELEAFRRLYPTQFYEKYLSQNVRPDARPLARARETDLQLGTVATSDGSAMAKIG 345
           ++  ++E++AFRRL+P +++E++LS+++RPDARPL RAR+T L LG VA++ GSA+AKIG
Sbjct: 9   DLSSEMEVDAFRRLFPLRYFERHLSESIRPDARPLGRARDTTLALGAVASAHGSALAKIG 68

Query: 346 NTAMLAGVKLEVMTPSEESPE 408
           +T MLA +K+EVMTPS ESPE
Sbjct: 69  STTMLAAIKMEVMTPSTESPE 89


>ref|XP_002308947.1| 3' exoribonuclease domain 1-containing family protein [Populus
           trichocarpa] gi|222854923|gb|EEE92470.1| 3'
           exoribonuclease domain 1-containing family protein
           [Populus trichocarpa]
          Length = 318

 Score =  109 bits (272), Expect = 4e-22
 Identities = 48/81 (59%), Positives = 70/81 (86%)
 Frame = +1

Query: 166 NMEEDLELEAFRRLYPTQFYEKYLSQNVRPDARPLARARETDLQLGTVATSDGSAMAKIG 345
           ++  ++E++AFRRL+P +++E++LS+++RPDARPL RAR+T L LG VA++ GSA+AKIG
Sbjct: 9   DLSSEMEVDAFRRLFPLRYFERHLSESIRPDARPLGRARDTTLALGAVASAHGSALAKIG 68

Query: 346 NTAMLAGVKLEVMTPSEESPE 408
           +T MLA +K+EVMTPS ESPE
Sbjct: 69  STTMLAAIKMEVMTPSTESPE 89


>ref|XP_001755996.1| predicted protein [Physcomitrella patens]
           gi|162692926|gb|EDQ79281.1| predicted protein
           [Physcomitrella patens]
          Length = 319

 Score =  109 bits (272), Expect = 4e-22
 Identities = 50/75 (66%), Positives = 63/75 (84%)
 Frame = +1

Query: 181 LELEAFRRLYPTQFYEKYLSQNVRPDARPLARARETDLQLGTVATSDGSAMAKIGNTAML 360
           +E+EA++RLYP QFYE++L  +VRPD RPL RAR T + LG++AT+DGSA+ KIGNT ML
Sbjct: 17  MEVEAYKRLYPLQFYERHLDSDVRPDGRPLTRARPTSVNLGSIATADGSALVKIGNTTML 76

Query: 361 AGVKLEVMTPSEESP 405
           AGVKLEV+TPS  SP
Sbjct: 77  AGVKLEVITPSTASP 91


>ref|XP_006489986.1| PREDICTED: exosome complex component RRP43-like isoform X1 [Citrus
           sinensis] gi|568873742|ref|XP_006489987.1| PREDICTED:
           exosome complex component RRP43-like isoform X2 [Citrus
           sinensis]
          Length = 302

 Score =  108 bits (269), Expect = 1e-21
 Identities = 45/81 (55%), Positives = 72/81 (88%)
 Frame = +1

Query: 166 NMEEDLELEAFRRLYPTQFYEKYLSQNVRPDARPLARARETDLQLGTVATSDGSAMAKIG 345
           ++  ++E++AFRRL+P +++E++L++++RPDARPL+RAR+T + +G VA++DGSA+AKIG
Sbjct: 9   DLSSEMEVDAFRRLFPLRYFERHLAESIRPDARPLSRARDTTISMGAVASADGSALAKIG 68

Query: 346 NTAMLAGVKLEVMTPSEESPE 408
           +T MLA +K+EVMTPS ESP+
Sbjct: 69  STTMLAAIKMEVMTPSLESPD 89


>ref|XP_006373782.1| hypothetical protein POPTR_0016s05590g [Populus trichocarpa]
           gi|550320907|gb|ERP51579.1| hypothetical protein
           POPTR_0016s05590g [Populus trichocarpa]
          Length = 323

 Score =  106 bits (264), Expect = 4e-21
 Identities = 46/81 (56%), Positives = 69/81 (85%)
 Frame = +1

Query: 166 NMEEDLELEAFRRLYPTQFYEKYLSQNVRPDARPLARARETDLQLGTVATSDGSAMAKIG 345
           ++  ++E++AFR L+P +++E++LS+++RPDARPL RAR+T L LG VA++ GSA+AKIG
Sbjct: 9   DLSSEMEVDAFRHLFPLRYFERHLSESIRPDARPLGRARDTTLALGAVASAHGSALAKIG 68

Query: 346 NTAMLAGVKLEVMTPSEESPE 408
           +T MLA +K+EVMTPS ESP+
Sbjct: 69  STTMLAAIKMEVMTPSTESPD 89


>emb|CBI29839.3| unnamed protein product [Vitis vinifera]
          Length = 311

 Score =  106 bits (264), Expect = 4e-21
 Identities = 47/84 (55%), Positives = 69/84 (82%)
 Frame = +1

Query: 157 MGSNMEEDLELEAFRRLYPTQFYEKYLSQNVRPDARPLARARETDLQLGTVATSDGSAMA 336
           +  ++  ++E++AFRRL+P +++E++L  ++RPDARPL RAR+T L LG VA++DGSA+A
Sbjct: 6   VSGDLSSEMEVDAFRRLFPLRYHERFLLDSIRPDARPLGRARDTSLALGAVASADGSALA 65

Query: 337 KIGNTAMLAGVKLEVMTPSEESPE 408
           KIG T MLA VK+EVMTP +ESP+
Sbjct: 66  KIGCTTMLAAVKMEVMTPPKESPD 89


>ref|XP_002284088.1| PREDICTED: exosome complex component RRP43-like [Vitis vinifera]
          Length = 303

 Score =  106 bits (264), Expect = 4e-21
 Identities = 47/84 (55%), Positives = 69/84 (82%)
 Frame = +1

Query: 157 MGSNMEEDLELEAFRRLYPTQFYEKYLSQNVRPDARPLARARETDLQLGTVATSDGSAMA 336
           +  ++  ++E++AFRRL+P +++E++L  ++RPDARPL RAR+T L LG VA++DGSA+A
Sbjct: 6   VSGDLSSEMEVDAFRRLFPLRYHERFLLDSIRPDARPLGRARDTSLALGAVASADGSALA 65

Query: 337 KIGNTAMLAGVKLEVMTPSEESPE 408
           KIG T MLA VK+EVMTP +ESP+
Sbjct: 66  KIGCTTMLAAVKMEVMTPPKESPD 89


>ref|XP_002322717.1| 3' exoribonuclease domain 1-containing family protein [Populus
           trichocarpa] gi|222867347|gb|EEF04478.1| 3'
           exoribonuclease domain 1-containing family protein
           [Populus trichocarpa]
          Length = 439

 Score =  106 bits (264), Expect = 4e-21
 Identities = 46/81 (56%), Positives = 69/81 (85%)
 Frame = +1

Query: 166 NMEEDLELEAFRRLYPTQFYEKYLSQNVRPDARPLARARETDLQLGTVATSDGSAMAKIG 345
           ++  ++E++AFR L+P +++E++LS+++RPDARPL RAR+T L LG VA++ GSA+AKIG
Sbjct: 9   DLSSEMEVDAFRHLFPLRYFERHLSESIRPDARPLGRARDTTLALGAVASAHGSALAKIG 68

Query: 346 NTAMLAGVKLEVMTPSEESPE 408
           +T MLA +K+EVMTPS ESP+
Sbjct: 69  STTMLAAIKMEVMTPSTESPD 89


>gb|EXC00696.1| hypothetical protein L484_001482 [Morus notabilis]
          Length = 319

 Score =  105 bits (261), Expect = 8e-21
 Identities = 45/81 (55%), Positives = 69/81 (85%)
 Frame = +1

Query: 166 NMEEDLELEAFRRLYPTQFYEKYLSQNVRPDARPLARARETDLQLGTVATSDGSAMAKIG 345
           ++  ++E++AFRRL+P +FYE +L++++RPD R L +AR+T ++LG VA++DGSA+AKIG
Sbjct: 9   DLSSEMEVDAFRRLFPLRFYEHHLAESIRPDGRALGKARDTTIELGAVASADGSALAKIG 68

Query: 346 NTAMLAGVKLEVMTPSEESPE 408
            T MLA +K+EVMTPS+ESP+
Sbjct: 69  LTTMLAAIKMEVMTPSKESPD 89


>ref|XP_006302607.1| hypothetical protein CARUB_v10020713mg [Capsella rubella]
           gi|482571317|gb|EOA35505.1| hypothetical protein
           CARUB_v10020713mg [Capsella rubella]
          Length = 302

 Score =  104 bits (260), Expect = 1e-20
 Identities = 44/80 (55%), Positives = 70/80 (87%)
 Frame = +1

Query: 169 MEEDLELEAFRRLYPTQFYEKYLSQNVRPDARPLARARETDLQLGTVATSDGSAMAKIGN 348
           +  ++E++AFRR++P +F+E++LS+++RPDARPL +AR+T + LG V+T+DGSA+AKIG+
Sbjct: 10  LSTEMEVDAFRRIFPLRFFERHLSESLRPDARPLGKARDTIVNLGLVSTADGSALAKIGS 69

Query: 349 TAMLAGVKLEVMTPSEESPE 408
           T MLA +++EVMTPS +SP+
Sbjct: 70  TTMLAAIRMEVMTPSADSPD 89


>ref|XP_006421389.1| hypothetical protein CICLE_v10005512mg [Citrus clementina]
           gi|567857414|ref|XP_006421390.1| hypothetical protein
           CICLE_v10005512mg [Citrus clementina]
           gi|557523262|gb|ESR34629.1| hypothetical protein
           CICLE_v10005512mg [Citrus clementina]
           gi|557523263|gb|ESR34630.1| hypothetical protein
           CICLE_v10005512mg [Citrus clementina]
          Length = 302

 Score =  104 bits (259), Expect = 1e-20
 Identities = 44/81 (54%), Positives = 70/81 (86%)
 Frame = +1

Query: 166 NMEEDLELEAFRRLYPTQFYEKYLSQNVRPDARPLARARETDLQLGTVATSDGSAMAKIG 345
           ++  ++E++AFRRL+P +++E++L++++RPDAR L+RAR T + +G VA++DGSA+AKIG
Sbjct: 9   DLSSEMEVDAFRRLFPLRYFERHLAESIRPDARSLSRARNTTISMGAVASADGSALAKIG 68

Query: 346 NTAMLAGVKLEVMTPSEESPE 408
           +T MLA +K+EVMTPS ESP+
Sbjct: 69  STTMLAAIKMEVMTPSLESPD 89


>ref|XP_004149399.1| PREDICTED: exosome complex component RRP43-like [Cucumis sativus]
           gi|449503802|ref|XP_004162184.1| PREDICTED: exosome
           complex component RRP43-like [Cucumis sativus]
          Length = 304

 Score =  103 bits (258), Expect = 2e-20
 Identities = 45/85 (52%), Positives = 69/85 (81%)
 Frame = +1

Query: 154 AMGSNMEEDLELEAFRRLYPTQFYEKYLSQNVRPDARPLARARETDLQLGTVATSDGSAM 333
           A   ++   +E++AFRRL+P QFYE++L++++RPD R L +AR+T + LG V++++GSA+
Sbjct: 6   AASGDLSSQMEVDAFRRLFPIQFYERHLTESIRPDGRSLGKARDTTIALGPVSSANGSAL 65

Query: 334 AKIGNTAMLAGVKLEVMTPSEESPE 408
           AKIG+T MLA +K+EVMTPS ESP+
Sbjct: 66  AKIGSTTMLAAIKMEVMTPSVESPD 90


>gb|EPS60631.1| hypothetical protein M569_14171, partial [Genlisea aurea]
          Length = 93

 Score =  102 bits (255), Expect = 4e-20
 Identities = 45/86 (52%), Positives = 69/86 (80%)
 Frame = +1

Query: 148 AMAMGSNMEEDLELEAFRRLYPTQFYEKYLSQNVRPDARPLARARETDLQLGTVATSDGS 327
           A +  S +   +E+++FRRL+P +F+E++L +++RPD RPL RAR+T + LG VA+++GS
Sbjct: 3   AASRESELSSQIEIDSFRRLFPLRFHERHLLESIRPDGRPLGRARDTTVMLGAVASANGS 62

Query: 328 AMAKIGNTAMLAGVKLEVMTPSEESP 405
           A+AKIG+T MLA +KLEVMTP+ E+P
Sbjct: 63  ALAKIGSTTMLAAIKLEVMTPTAEAP 88


>ref|XP_006596183.1| PREDICTED: exosome complex component RRP43-like isoform X2 [Glycine
           max] gi|571509870|ref|XP_006596184.1| PREDICTED: exosome
           complex component RRP43-like isoform X3 [Glycine max]
          Length = 307

 Score =  102 bits (253), Expect = 7e-20
 Identities = 47/86 (54%), Positives = 69/86 (80%), Gaps = 4/86 (4%)
 Frame = +1

Query: 163 SNMEEDL----ELEAFRRLYPTQFYEKYLSQNVRPDARPLARARETDLQLGTVATSDGSA 330
           SN  EDL    E++AFRRL+P +++E++L++++RPD RPL +ARET + LG VA+++GSA
Sbjct: 4   SNASEDLSSEMEVDAFRRLFPLRYFERHLAESIRPDGRPLGKARETSIFLGAVASANGSA 63

Query: 331 MAKIGNTAMLAGVKLEVMTPSEESPE 408
           + KIG+T ML  +K+EVMTPS ESP+
Sbjct: 64  LVKIGSTTMLTAIKMEVMTPSLESPD 89


>ref|XP_003544676.1| PREDICTED: exosome complex component RRP43-like isoform X1 [Glycine
           max] gi|571509874|ref|XP_006596185.1| PREDICTED: exosome
           complex component RRP43-like isoform X4 [Glycine max]
          Length = 299

 Score =  102 bits (253), Expect = 7e-20
 Identities = 47/86 (54%), Positives = 69/86 (80%), Gaps = 4/86 (4%)
 Frame = +1

Query: 163 SNMEEDL----ELEAFRRLYPTQFYEKYLSQNVRPDARPLARARETDLQLGTVATSDGSA 330
           SN  EDL    E++AFRRL+P +++E++L++++RPD RPL +ARET + LG VA+++GSA
Sbjct: 4   SNASEDLSSEMEVDAFRRLFPLRYFERHLAESIRPDGRPLGKARETSIFLGAVASANGSA 63

Query: 331 MAKIGNTAMLAGVKLEVMTPSEESPE 408
           + KIG+T ML  +K+EVMTPS ESP+
Sbjct: 64  LVKIGSTTMLTAIKMEVMTPSLESPD 89


>ref|XP_002532079.1| exosome complex exonuclease rrp43, putative [Ricinus communis]
           gi|223528261|gb|EEF30313.1| exosome complex exonuclease
           rrp43, putative [Ricinus communis]
          Length = 303

 Score =  101 bits (252), Expect = 9e-20
 Identities = 44/84 (52%), Positives = 67/84 (79%)
 Frame = +1

Query: 157 MGSNMEEDLELEAFRRLYPTQFYEKYLSQNVRPDARPLARARETDLQLGTVATSDGSAMA 336
           +  ++  ++E +AFRRL+P  F+E++L++++RPD R L RAR+T L LG V ++DGSA+A
Sbjct: 6   VSGDLSTEMEADAFRRLFPLLFHERHLAESIRPDGRSLGRARDTTLALGAVVSADGSAIA 65

Query: 337 KIGNTAMLAGVKLEVMTPSEESPE 408
           KIG+T M+A +K+EVMTPS ESP+
Sbjct: 66  KIGSTTMMAAIKMEVMTPSSESPD 89


>gb|ESW05464.1| hypothetical protein PHAVU_011G181200g [Phaseolus vulgaris]
          Length = 301

 Score =  101 bits (251), Expect = 1e-19
 Identities = 43/81 (53%), Positives = 68/81 (83%)
 Frame = +1

Query: 166 NMEEDLELEAFRRLYPTQFYEKYLSQNVRPDARPLARARETDLQLGTVATSDGSAMAKIG 345
           ++  ++E++AFRRL+P +++E++L++++RPD RPL +ARET + LG V+T+ GSA+ KIG
Sbjct: 9   DLSSEMEVDAFRRLFPLRYFERHLAESIRPDGRPLGKARETSIFLGAVSTAHGSALVKIG 68

Query: 346 NTAMLAGVKLEVMTPSEESPE 408
           +T MLA VK+EVM+PS ESP+
Sbjct: 69  STTMLAAVKMEVMSPSLESPD 89


>ref|XP_006850813.1| hypothetical protein AMTR_s00025p00117140 [Amborella trichopoda]
           gi|548854484|gb|ERN12394.1| hypothetical protein
           AMTR_s00025p00117140 [Amborella trichopoda]
          Length = 306

 Score =  100 bits (249), Expect = 2e-19
 Identities = 45/80 (56%), Positives = 64/80 (80%)
 Frame = +1

Query: 169 MEEDLELEAFRRLYPTQFYEKYLSQNVRPDARPLARARETDLQLGTVATSDGSAMAKIGN 348
           +E ++E+EA+RRL+P QFYE++LS +VRPDARPL +AR T +    + ++D SAM KIGN
Sbjct: 8   LEGEMEVEAYRRLFPLQFYERHLSDSVRPDARPLNKARPTSIVPAPLPSADASAMVKIGN 67

Query: 349 TAMLAGVKLEVMTPSEESPE 408
           T ML+G+KLE+M PS +SP+
Sbjct: 68  TTMLSGIKLEIMFPSSDSPD 87