BLASTX nr result
ID: Ephedra28_contig00022949
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00022949
(1218 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006850196.1| hypothetical protein AMTR_s00022p00248730 [A... 238 5e-60
ref|XP_002269136.1| PREDICTED: pentatricopeptide repeat-containi... 218 4e-54
emb|CAN76479.1| hypothetical protein VITISV_028175 [Vitis vinifera] 217 7e-54
gb|EMJ02980.1| hypothetical protein PRUPE_ppa001132mg [Prunus pe... 211 6e-52
ref|XP_006342394.1| PREDICTED: pentatricopeptide repeat-containi... 208 4e-51
ref|XP_006385090.1| hypothetical protein POPTR_0004s23800g [Popu... 207 9e-51
ref|XP_002328803.1| predicted protein [Populus trichocarpa] 207 9e-51
gb|EOY02481.1| Pentatricopeptide repeat-containing protein, puta... 204 6e-50
ref|XP_004243929.1| PREDICTED: pentatricopeptide repeat-containi... 204 8e-50
ref|XP_002532584.1| pentatricopeptide repeat-containing protein,... 204 8e-50
gb|EXB93154.1| hypothetical protein L484_024492 [Morus notabilis] 194 8e-47
ref|XP_004291546.1| PREDICTED: pentatricopeptide repeat-containi... 192 2e-46
ref|NP_177277.2| pentatricopeptide repeat-containing protein [Ar... 191 4e-46
gb|AAG51690.1|AC016972_9 hypothetical protein; 66200-63606 [Arab... 191 4e-46
ref|XP_002888826.1| hypothetical protein ARALYDRAFT_894959 [Arab... 187 1e-44
ref|XP_004144802.1| PREDICTED: pentatricopeptide repeat-containi... 186 2e-44
ref|XP_004172369.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 186 2e-44
ref|XP_006441414.1| hypothetical protein CICLE_v10024609mg [Citr... 185 4e-44
ref|XP_006301839.1| hypothetical protein CARUB_v10022308mg [Caps... 184 5e-44
ref|XP_006493417.1| PREDICTED: pentatricopeptide repeat-containi... 183 1e-43
>ref|XP_006850196.1| hypothetical protein AMTR_s00022p00248730 [Amborella trichopoda]
gi|548853794|gb|ERN11777.1| hypothetical protein
AMTR_s00022p00248730 [Amborella trichopoda]
Length = 897
Score = 238 bits (606), Expect = 5e-60
Identities = 127/370 (34%), Positives = 204/370 (55%), Gaps = 4/370 (1%)
Frame = -3
Query: 1216 MNAAVQFFCTGKFLDVAMSFYHERKEIGIAVDAFTYKKLATALCGVGKLEEAYEVLNDGI 1037
MNA V FFC +DVA+ Y++R E+G Y L ALC +++EA+ VL DG+
Sbjct: 390 MNATVCFFCKAGMVDVAIELYNDRLEMGFCPSYLAYNSLINALCRDWRVDEAFRVLEDGL 449
Query: 1036 SAGHRIIKPALFILARALLNVGKVDLSVNLFDIAAATDCPPNTPLANAIVRSLCEAGKVD 857
+ K FILA AL G +D L D A + P+ + + +LC+AG+VD
Sbjct: 450 QGNYFPGKKTFFILADALYRSGDLDKMGKLVDAAIERNFLPSNAICVRYISALCKAGRVD 509
Query: 856 DAYGFLKKLKKNRAVPSRRIYSLVIEGFCDTRRVEMAYNLLMEMQHHGHAPGDFILKYVF 677
+ Y KL K R Y +I GFC+ +R ++A LL+EM+ +GH+P + + V
Sbjct: 510 EGYLLPAKLNKPDMFLRRSTYFDLIYGFCEKKRGDIASRLLLEMRENGHSPSRSLYRVVI 569
Query: 676 CILCEVGHTELALNLINAHMYGH----PVDVKLYNRFIKIINGSGRPDIAIQVMERMMEE 509
LC++GH E LNL+ H+ G+ V+ ++YN FI +G+P++A +V E+M+E+
Sbjct: 570 SCLCDMGHIEQVLNLLEMHVNGNLSDSEVENEIYNHFIDAAGHAGQPELARKVFEKMVED 629
Query: 508 NHTPNLKSYVSLLYGFLISKSVVNAMNLFRELLVEKRILRSLYNVMVCGLCKIPNSDLAL 329
PN+ + + +L+ +L SK +V A+N FREL LYNV++ GLC+ ++LAL
Sbjct: 630 GLRPNIHTNILMLHSYLKSKRIVTALNSFRELCECLEPSTKLYNVIIVGLCRADKTELAL 689
Query: 328 MYYQEMLGKRLQPSRACYVNLIRVLCVEGQFNLALELVGELKNKKYELRTYDYNVLLYYS 149
+++ + L PS CY L+ +LC + + +++V + + + Y YN+LL +
Sbjct: 690 ALWRDARERGLIPSLTCYEELVHMLCCSENYEMVIKVVKDFEETGRHVSIYMYNILLCHI 749
Query: 148 FKISEVNHAW 119
K E+ AW
Sbjct: 750 LKSQELIKAW 759
Score = 59.3 bits (142), Expect = 3e-06
Identities = 88/417 (21%), Positives = 158/417 (37%), Gaps = 18/417 (4%)
Frame = -3
Query: 1207 AVQFFCTGKFLDVAMSFYHERKEIGIAVDAFTYKKLATALCGVGKLEEAYEVLNDGISAG 1028
+++ C LD AM+ E G V+ + ALC + E ++ + +G
Sbjct: 252 SMKSLCKQNRLDEAMNLLLELLRNGNDVNEYMLTITVDALCRQRRFVEVEGLMEEFRDSG 311
Query: 1027 HRIIKPALFILARALLNVGKVDLSVNLF-DIAAATDCPPNTPLANAIVRSLCEAGKVDDA 851
+ A L+ G +D ++ LF D P ++ L ++++
Sbjct: 312 KISMSNAYNTWITHLVETGSIDSAMELFHDEKNVGFFSPWLRCYTVLITGLLRKDRLEEI 371
Query: 850 YGFLKKLKKNRAVPSRRIYSLVIEGFCDTRRVEMAYNLLMEMQHHGHAPGDFILKYVFCI 671
Y L +++ R + + FC V++A L + G P +
Sbjct: 372 YDLLVEMRLRGIFADRNTMNATVCFFCKAGMVDVAIELYNDRLEMGFCPSYLAYNSLINA 431
Query: 670 LCEVGHTELALNLINAHMYGHPV-DVKLYNRFIKIINGSGRPDIAIQVMERMMEENHTPN 494
LC + A ++ + G+ K + + SG D ++++ +E N P+
Sbjct: 432 LCRDWRVDEAFRVLEDGLQGNYFPGKKTFFILADALYRSGDLDKMGKLVDAAIERNFLPS 491
Query: 493 ---LKSYVSLL-------YGFLISKSVVNAMNLFRELLVEKRILRSLYNVMVCGLCKIPN 344
Y+S L G+L+ + +N ++F + RS Y ++ G C+
Sbjct: 492 NAICVRYISALCKAGRVDEGYLL-PAKLNKPDMF--------LRRSTYFDLIYGFCEKKR 542
Query: 343 SDLALMYYQEMLGKRLQPSRACYVNLIRVLCVEGQFNLALELV-----GELKNKKYELRT 179
D+A EM PSR+ Y +I LC G L L+ G L + E+
Sbjct: 543 GDIASRLLLEMRENGHSPSRSLYRVVISCLCDMGHIEQVLNLLEMHVNGNLSDS--EVEN 600
Query: 178 YDYNVLLYYSFKISEVNHAWFFFTDMRNQKCPPNVSTFNILILGS-SRARRFVKCLS 11
YN + + + A F M PN+ T NIL+L S +++R V L+
Sbjct: 601 EIYNHFIDAAGHAGQPELARKVFEKMVEDGLRPNIHT-NILMLHSYLKSKRIVTALN 656
>ref|XP_002269136.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71210-like
[Vitis vinifera]
Length = 881
Score = 218 bits (555), Expect = 4e-54
Identities = 123/382 (32%), Positives = 199/382 (52%), Gaps = 1/382 (0%)
Frame = -3
Query: 1216 MNAAVQFFCTGKFLDVAMSFYHERKEIGIAVDAFTYKKLATALCGVGKLEEAYEVLNDGI 1037
MNA + FFC +DVA+ Y+ R E G++ ++ Y L LCG G +EAY VL +
Sbjct: 391 MNAVLCFFCKAGMVDVALELYNSRAEFGLSPNSMAYNYLINTLCGDGSTDEAYHVLKHSL 450
Query: 1036 SAGHRIIKPALFILARALLNVGKVDLSVNLFDIAAATDCPPNTPLANAIVRSLCEAGKVD 857
G+ K ILA AL GK+D L +A + P+ + + +LC+A +VD
Sbjct: 451 EQGYFPGKKTFSILADALCQEGKLDKMKELVLVALDRNIMPSASTYDKFILALCKARRVD 510
Query: 856 DAYGFLKKLKKNRAVPSRRIYSLVIEGFCDTRRVEMAYNLLMEMQHHGHAPGDFILKYVF 677
D Y +L K V S+ Y +I GF R ++A LL+E+Q GH P + + V
Sbjct: 511 DGYLIQGELNKINKVASKNTYFNMIRGFNILNRADIAARLLIELQEKGHTPTRSLFRAVI 570
Query: 676 CILCEVGHTELA-LNLINAHMYGHPVDVKLYNRFIKIINGSGRPDIAIQVMERMMEENHT 500
C LC++ + E L L+ + + ++YN FI + +P++A +V E M+
Sbjct: 571 CRLCDMDNAEKQFLKLLELQLSHQEPNCQVYNFFIDGAGHAKKPELAREVFEMMVRSGIV 630
Query: 499 PNLKSYVSLLYGFLISKSVVNAMNLFRELLVEKRILRSLYNVMVCGLCKIPNSDLALMYY 320
PNL S + +L +L ++ + +A+N F +L +++ R L N MV GLCK D+AL
Sbjct: 631 PNLSSDILMLQSYLKNERISDALNFFSDLQKRRKVGRKLCNTMVVGLCKANKVDIALEIL 690
Query: 319 QEMLGKRLQPSRACYVNLIRVLCVEGQFNLALELVGELKNKKYELRTYDYNVLLYYSFKI 140
+E+ K + PS CY L++VLC ++++ + L+ +L+ + ++ NVLL +S K
Sbjct: 691 KEIREKGVTPSLECYEELVKVLCTNKRYDVVVNLIDDLERVGRHVSSFIGNVLLLHSLKT 750
Query: 139 SEVNHAWFFFTDMRNQKCPPNV 74
E+ W D N+ PN+
Sbjct: 751 PELFETWVHAKDAHNEISSPNL 772
Score = 89.7 bits (221), Expect = 2e-15
Identities = 82/373 (21%), Positives = 155/373 (41%), Gaps = 11/373 (2%)
Frame = -3
Query: 1114 TYKKLATALCGVGKLEEAYEVLND-------GISAGHRIIKPALFILARALLNVGKVDLS 956
T+ + C G+L+EA + G+S GH + ++ AL + +
Sbjct: 247 THSIIVKNFCKQGQLDEAKAFVEQLVESGRVGLSGGHMV-----GLIVDALCKRKRFGEA 301
Query: 955 VNLFDIAAATDCPPNTPLANAIVRSLCEAGKVDDAYGFLKKLKKNRA-VPSRRIYSLVIE 779
L + + +R L AG++D A FL K++ VP Y+++I
Sbjct: 302 GRLVEEFQGSGMVSVEQAYGVWIRDLVRAGRLDGALEFLHSKKESEGYVPEVCGYNILIC 361
Query: 778 GFCDTRRVEMAYNLLMEMQHHGHAPGDFILKYVFCILCEVGHTELALNLINAHM-YGHPV 602
R+E +LLMEM+ P + V C C+ G ++AL L N+ +G
Sbjct: 362 RLLRENRLEEVLDLLMEMREGQILPDKVTMNAVLCFFCKAGMVDVALELYNSRAEFGLSP 421
Query: 601 DVKLYNRFIKIINGSGRPDIAIQVMERMMEENHTPNLKSYVSLLYGFLISKSVVNAMNLF 422
+ YN I + G G D A V++ +E+ + P K++ S+L L + ++ M
Sbjct: 422 NSMAYNYLINTLCGDGSTDEAYHVLKHSLEQGYFPGKKTF-SILADALCQEGKLDKMKEL 480
Query: 421 RELLVEKRIL--RSLYNVMVCGLCKIPNSDLALMYYQEMLGKRLQPSRACYVNLIRVLCV 248
+ +++ I+ S Y+ + LCK D + E+ S+ Y N+IR +
Sbjct: 481 VLVALDRNIMPSASTYDKFILALCKARRVDDGYLIQGELNKINKVASKNTYFNMIRGFNI 540
Query: 247 EGQFNLALELVGELKNKKYELRTYDYNVLLYYSFKISEVNHAWFFFTDMRNQKCPPNVST 68
+ ++A L+ EL+ K + + ++ + + +++ PN
Sbjct: 541 LNRADIAARLLIELQEKGHTPTRSLFRAVICRLCDMDNAEKQFLKLLELQLSHQEPNCQV 600
Query: 67 FNILILGSSRARR 29
+N I G+ A++
Sbjct: 601 YNFFIDGAGHAKK 613
Score = 58.2 bits (139), Expect = 7e-06
Identities = 67/301 (22%), Positives = 127/301 (42%), Gaps = 9/301 (2%)
Frame = -3
Query: 904 LANAIVRSLCEAGKVDDAYGFLKKLKKNRAVPSRRIYSLVIEGFCDTRRVEMAYNLLMEM 725
L NA+V C DA+ + + + R + + +S++++ FC +++ A + ++
Sbjct: 217 LLNALVEENCF-----DAFRVVVEQIRMRGLDNEITHSIIVKNFCKQGQLDEAKAFVEQL 271
Query: 724 QHHGHA--PGDFILKYVFCILCEVGHTELALNLINAHMYGHPVDV-KLYNRFIKIINGSG 554
G G ++ + LC+ A L+ V V + Y +I+ + +G
Sbjct: 272 VESGRVGLSGGHMVGLIVDALCKRKRFGEAGRLVEEFQGSGMVSVEQAYGVWIRDLVRAG 331
Query: 553 RPDIAIQVMERMME-ENHTPNLKSYVSLLYGFLISKSVVNAMNLFRELLVEKRIL--RSL 383
R D A++ + E E + P + Y L+ L + ++L E+ E +IL +
Sbjct: 332 RLDGALEFLHSKKESEGYVPEVCGYNILICRLLRENRLEEVLDLLMEMR-EGQILPDKVT 390
Query: 382 YNVMVCGLCKIPNSDLALMYYQEMLGKRLQPSRACYVNLIRVLCVEGQFNLALELVGELK 203
N ++C CK D+AL Y L P+ Y LI LC +G + A ++
Sbjct: 391 MNAVLCFFCKAGMVDVALELYNSRAEFGLSPNSMAYNYLINTLCGDGSTDEAYHVLKHSL 450
Query: 202 NKKYELRTYDYNVL---LYYSFKISEVNHAWFFFTDMRNQKCPPNVSTFNILILGSSRAR 32
+ Y +++L L K+ ++ D + P+ ST++ IL +AR
Sbjct: 451 EQGYFPGKKTFSILADALCQEGKLDKMKELVLVALD---RNIMPSASTYDKFILALCKAR 507
Query: 31 R 29
R
Sbjct: 508 R 508
>emb|CAN76479.1| hypothetical protein VITISV_028175 [Vitis vinifera]
Length = 1173
Score = 217 bits (553), Expect = 7e-54
Identities = 123/382 (32%), Positives = 199/382 (52%), Gaps = 1/382 (0%)
Frame = -3
Query: 1216 MNAAVQFFCTGKFLDVAMSFYHERKEIGIAVDAFTYKKLATALCGVGKLEEAYEVLNDGI 1037
MNA + FFC +DVA+ Y+ R E G++ ++ Y L LCG G +EAY VL +
Sbjct: 391 MNAVLCFFCKAGMVDVALELYNSRAEFGLSPNSMAYNYLINTLCGDGSTDEAYHVLKHSL 450
Query: 1036 SAGHRIIKPALFILARALLNVGKVDLSVNLFDIAAATDCPPNTPLANAIVRSLCEAGKVD 857
G+ K ILA AL GK+D L +A + P+ + + +LC+A +VD
Sbjct: 451 EQGYFPGKKTFSILADALCQEGKLDKMKELVLVALDRNIMPSASTYDKFILALCKARRVD 510
Query: 856 DAYGFLKKLKKNRAVPSRRIYSLVIEGFCDTRRVEMAYNLLMEMQHHGHAPGDFILKYVF 677
D Y +L K V S+ Y +I GF R ++A LL+E+Q GH P + + V
Sbjct: 511 DGYLIQGELNKINKVASKNTYFNMIRGFNILNRADIAARLLIELQEKGHTPTRSLFRAVI 570
Query: 676 CILCEVGHTELA-LNLINAHMYGHPVDVKLYNRFIKIINGSGRPDIAIQVMERMMEENHT 500
C LC++ + E L L+ + + ++YN FI + +P++A +V E M+
Sbjct: 571 CRLCDMDNAEKQFLKLLELQLSHQEPNCQVYNFFIDGAGHAKKPELAREVFEMMVRSGIV 630
Query: 499 PNLKSYVSLLYGFLISKSVVNAMNLFRELLVEKRILRSLYNVMVCGLCKIPNSDLALMYY 320
PNL S + +L +L ++ + +A+N F +L +++ R L N MV GLCK D+AL
Sbjct: 631 PNLSSDILMLQSYLKNERISDALNFFSDLQKRRKVGRKLCNTMVVGLCKANKVDIALEIL 690
Query: 319 QEMLGKRLQPSRACYVNLIRVLCVEGQFNLALELVGELKNKKYELRTYDYNVLLYYSFKI 140
+E+ K + PS CY L++VLC ++++ + L+ +L+ + ++ NVLL +S K
Sbjct: 691 KEIREKGVTPSLECYEELVKVLCKNKRYDVVVNLIDDLERVGRHVSSFIGNVLLLHSLKT 750
Query: 139 SEVNHAWFFFTDMRNQKCPPNV 74
E+ W D N+ PN+
Sbjct: 751 PELFETWVHAKDAHNEISSPNL 772
Score = 89.7 bits (221), Expect = 2e-15
Identities = 82/373 (21%), Positives = 155/373 (41%), Gaps = 11/373 (2%)
Frame = -3
Query: 1114 TYKKLATALCGVGKLEEAYEVLND-------GISAGHRIIKPALFILARALLNVGKVDLS 956
T+ + C G+L+EA + G+S GH + ++ AL + +
Sbjct: 247 THSIIVKNFCKQGQLDEAKAFVEQLVESGRVGLSGGHMV-----GLIVDALCKRKRFGEA 301
Query: 955 VNLFDIAAATDCPPNTPLANAIVRSLCEAGKVDDAYGFLKKLKKNRA-VPSRRIYSLVIE 779
L + + +R L AG++D A FL K++ VP Y+++I
Sbjct: 302 GRLVEEFQGSGMVSVEQAYGVWIRDLVRAGRLDGALEFLHSKKESEGYVPEVCGYNILIC 361
Query: 778 GFCDTRRVEMAYNLLMEMQHHGHAPGDFILKYVFCILCEVGHTELALNLINAHM-YGHPV 602
R+E +LLMEM+ P + V C C+ G ++AL L N+ +G
Sbjct: 362 RLLRENRLEEVLDLLMEMREGQILPDKVTMNAVLCFFCKAGMVDVALELYNSRAEFGLSP 421
Query: 601 DVKLYNRFIKIINGSGRPDIAIQVMERMMEENHTPNLKSYVSLLYGFLISKSVVNAMNLF 422
+ YN I + G G D A V++ +E+ + P K++ S+L L + ++ M
Sbjct: 422 NSMAYNYLINTLCGDGSTDEAYHVLKHSLEQGYFPGKKTF-SILADALCQEGKLDKMKEL 480
Query: 421 RELLVEKRIL--RSLYNVMVCGLCKIPNSDLALMYYQEMLGKRLQPSRACYVNLIRVLCV 248
+ +++ I+ S Y+ + LCK D + E+ S+ Y N+IR +
Sbjct: 481 VLVALDRNIMPSASTYDKFILALCKARRVDDGYLIQGELNKINKVASKNTYFNMIRGFNI 540
Query: 247 EGQFNLALELVGELKNKKYELRTYDYNVLLYYSFKISEVNHAWFFFTDMRNQKCPPNVST 68
+ ++A L+ EL+ K + + ++ + + +++ PN
Sbjct: 541 LNRADIAARLLIELQEKGHTPTRSLFRAVICRLCDMDNAEKQFLKLLELQLSHQEPNCQV 600
Query: 67 FNILILGSSRARR 29
+N I G+ A++
Sbjct: 601 YNFFIDGAGHAKK 613
Score = 58.2 bits (139), Expect = 7e-06
Identities = 67/301 (22%), Positives = 127/301 (42%), Gaps = 9/301 (2%)
Frame = -3
Query: 904 LANAIVRSLCEAGKVDDAYGFLKKLKKNRAVPSRRIYSLVIEGFCDTRRVEMAYNLLMEM 725
L NA+V C DA+ + + + R + + +S++++ FC +++ A + ++
Sbjct: 217 LLNALVEENCF-----DAFRVVVEQIRMRGLDNEITHSIIVKNFCKQGQLDEAKAFVEQL 271
Query: 724 QHHGHA--PGDFILKYVFCILCEVGHTELALNLINAHMYGHPVDV-KLYNRFIKIINGSG 554
G G ++ + LC+ A L+ V V + Y +I+ + +G
Sbjct: 272 VESGRVGLSGGHMVGLIVDALCKRKRFGEAGRLVEEFQGSGMVSVEQAYGVWIRDLVRAG 331
Query: 553 RPDIAIQVMERMME-ENHTPNLKSYVSLLYGFLISKSVVNAMNLFRELLVEKRIL--RSL 383
R D A++ + E E + P + Y L+ L + ++L E+ E +IL +
Sbjct: 332 RLDGALEFLHSKKESEGYVPEVCGYNILICRLLRENRLEEVLDLLMEMR-EGQILPDKVT 390
Query: 382 YNVMVCGLCKIPNSDLALMYYQEMLGKRLQPSRACYVNLIRVLCVEGQFNLALELVGELK 203
N ++C CK D+AL Y L P+ Y LI LC +G + A ++
Sbjct: 391 MNAVLCFFCKAGMVDVALELYNSRAEFGLSPNSMAYNYLINTLCGDGSTDEAYHVLKHSL 450
Query: 202 NKKYELRTYDYNVL---LYYSFKISEVNHAWFFFTDMRNQKCPPNVSTFNILILGSSRAR 32
+ Y +++L L K+ ++ D + P+ ST++ IL +AR
Sbjct: 451 EQGYFPGKKTFSILADALCQEGKLDKMKELVLVALD---RNIMPSASTYDKFILALCKAR 507
Query: 31 R 29
R
Sbjct: 508 R 508
>gb|EMJ02980.1| hypothetical protein PRUPE_ppa001132mg [Prunus persica]
Length = 899
Score = 211 bits (536), Expect = 6e-52
Identities = 121/377 (32%), Positives = 197/377 (52%), Gaps = 1/377 (0%)
Frame = -3
Query: 1216 MNAAVQFFCTGKFLDVAMSFYHERKEIGIAVDAFTYKKLATALCGVGKLEEAYEVLNDGI 1037
MNAA+ FFC +DVA+ Y+ + E G++ ++ Y L CG G ++EAYEVL + I
Sbjct: 410 MNAALCFFCKAGMVDVALELYNSKSEFGLSPNSLAYNYLINTFCGDGSVDEAYEVLKNSI 469
Query: 1036 SAGHRIIKPALFILARALLNVGKVDLSVNLFDIAAATDCPPNTPLANAIVRSLCEAGKVD 857
+ + ILA AL GK+D L A + P+ + + +LC +V+
Sbjct: 470 KQDYFPGRKTFSILADALCREGKLDKMKELVIFALERNFMPSGSTYDKFITTLCRTKRVE 529
Query: 856 DAYGFLKKLKKNRAVPSRRIYSLVIEGFCDTRRVEMAYNLLMEMQHHGHAPGDFILKYVF 677
D Y +L + V + Y +I GF ++ R ++A LL+EMQ GH+P + + V
Sbjct: 530 DGYLIHGELNRLNKVARKSTYFNLIRGFNESSRGDIAARLLIEMQERGHSPTRNLFRDVI 589
Query: 676 CILCEVGHTELA-LNLINAHMYGHPVDVKLYNRFIKIINGSGRPDIAIQVMERMMEENHT 500
C LC + + NL+ + ++YN FI + RPD+A QV E M
Sbjct: 590 CCLCATENPDKQFFNLLELQLCCREPSCQIYNFFIYGAGHAKRPDLARQVYETMQRSGIE 649
Query: 499 PNLKSYVSLLYGFLISKSVVNAMNLFRELLVEKRILRSLYNVMVCGLCKIPNSDLALMYY 320
PNL+S V +L +L S+ + +A+N F +L + + R LY+ M+ GLCK+ D+AL +
Sbjct: 650 PNLRSDVLMLQSYLRSERISDALNFFNDLHQRREMGRRLYSTMIVGLCKVKRVDIALDFL 709
Query: 319 QEMLGKRLQPSRACYVNLIRVLCVEGQFNLALELVGELKNKKYELRTYDYNVLLYYSFKI 140
+EM K + PS CY LI++ C +++A+ L+ +L+ + ++ N+LL +S K
Sbjct: 710 KEMREKGVVPSDDCYEFLIQLSCWNQGYHIAVNLINDLEKVGRHITSFTGNILLLHSLKS 769
Query: 139 SEVNHAWFFFTDMRNQK 89
E+ AW + N+K
Sbjct: 770 QELYDAWVQLRQVPNEK 786
>ref|XP_006342394.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71210-like
isoform X1 [Solanum tuberosum]
gi|565350891|ref|XP_006342395.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g71210-like isoform X2 [Solanum tuberosum]
Length = 895
Score = 208 bits (529), Expect = 4e-51
Identities = 125/377 (33%), Positives = 191/377 (50%), Gaps = 1/377 (0%)
Frame = -3
Query: 1216 MNAAVQFFCTGKFLDVAMSFYHERKEIGIAVDAFTYKKLATALCGVGKLEEAYEVLNDGI 1037
MN + FFC DVA+ Y R E G++V + TY L L G ++EAY VL + I
Sbjct: 406 MNVTLCFFCKVGMADVAVELYDSRAEFGLSVSSMTYNYLINTLLGDASVDEAYLVLKNAI 465
Query: 1036 SAGHRIIKPALFILARALLNVGKVDLSVNLFDIAAATDCPPNTPLANAIVRSLCEAGKVD 857
GH + I+A AL GK+D L + +C P+ N + +LC A +V+
Sbjct: 466 QQGHFPGRRTFSIIADALCREGKLDRVKELVLASLERNCVPSDSTYNKFISALCRASRVE 525
Query: 856 DAYGFLKKLKKNRAVPSRRIYSLVIEGFCDTRRVEMAYNLLMEMQHHGHAPGDFILKYVF 677
D Y L + V S+ Y +I GF + R ++A LL+EMQ GH+P + + V
Sbjct: 526 DGYLVHGALSRFDKVTSKTTYFDLISGFNKSSRGDIAARLLIEMQEKGHSPDRRLYRAVI 585
Query: 676 CILCEVGHTE-LALNLINAHMYGHPVDVKLYNRFIKIINGSGRPDIAIQVMERMMEENHT 500
C LC++ + L +L+ + H +YN FI +G+P++A V E M T
Sbjct: 586 CCLCQMEDPDKLFYSLLEVQLSRHEPSCLVYNYFIDGAGHAGKPELARDVYEMMKRNGIT 645
Query: 499 PNLKSYVSLLYGFLISKSVVNAMNLFRELLVEKRILRSLYNVMVCGLCKIPNSDLALMYY 320
PNL+S + +L +L + + +A+N FR+L + + R L+N MV GLCK A +
Sbjct: 646 PNLQSDILILQSYLKAGKIADALNYFRDLSNRRGLGRKLWNNMVVGLCKANKPGNAWNMF 705
Query: 319 QEMLGKRLQPSRACYVNLIRVLCVEGQFNLALELVGELKNKKYELRTYDYNVLLYYSFKI 140
EM L+PS CY L+++LC + A+ LV +L ++ ++ NVLL +S +
Sbjct: 706 WEMRSTHLRPSMECYEELVKLLCSHRDYYKAILLVEDLMQVGRQVSSFIGNVLLLHSLQT 765
Query: 139 SEVNHAWFFFTDMRNQK 89
V AW D+RN K
Sbjct: 766 HRVFSAWMHSRDLRNTK 782
Score = 77.8 bits (190), Expect = 8e-12
Identities = 74/372 (19%), Positives = 157/372 (42%), Gaps = 9/372 (2%)
Frame = -3
Query: 1123 DAFTYKKLATALCGVGKLEEAYEVL-----NDGISAGHRIIKPALFILARALLNVGKVDL 959
DA T+ +LC +L+ A + L N G+ ++ L AL +
Sbjct: 260 DAITHAIFVKSLCQQTELDRAEDYLRGLLRNGGVGLSGIVVAN----LVDALCKNKQFTR 315
Query: 958 SVNLFDIAAATDCPPNTPLANAIVRSLCEAGKVDDAYGFLKKLK-KNRAVPSRRIYSLVI 782
+ +L + P + ++ L +AG++ +A FLK K + VP Y+ ++
Sbjct: 316 AASLVQEFRESGLVPMEQAYSVWIKDLAQAGELSEAVEFLKGKKLADGYVPDVFRYNSLV 375
Query: 781 EGFCDTRRVEMAYNLLMEMQHHGHAPGDFILKYVFCILCEVGHTELALNLINAHM-YGHP 605
R+E Y+LLM+M+ P D + C C+VG ++A+ L ++ +G
Sbjct: 376 CRLLRENRLEEVYDLLMDMKDQDIIPDDVTMNVTLCFFCKVGMADVAVELYDSRAEFGLS 435
Query: 604 VDVKLYNRFIKIINGSGRPDIAIQVMERMMEENHTPNLKSYVSLLYGFLISKSVVNAMNL 425
V YN I + G D A V++ +++ H P +++ S++ L + ++ +
Sbjct: 436 VSSMTYNYLINTLLGDASVDEAYLVLKNAIQQGHFPGRRTF-SIIADALCREGKLDRVKE 494
Query: 424 FRELLVEKRIL--RSLYNVMVCGLCKIPNSDLALMYYQEMLGKRLQPSRACYVNLIRVLC 251
+E+ + S YN + LC+ + + + + S+ Y +LI
Sbjct: 495 LVLASLERNCVPSDSTYNKFISALCRASRVEDGYLVHGALSRFDKVTSKTTYFDLISGFN 554
Query: 250 VEGQFNLALELVGELKNKKYELRTYDYNVLLYYSFKISEVNHAWFFFTDMRNQKCPPNVS 71
+ ++A L+ E++ K + Y ++ ++ + + ++ +++ + P+
Sbjct: 555 KSSRGDIAARLLIEMQEKGHSPDRRLYRAVICCLCQMEDPDKLFYSLLEVQLSRHEPSCL 614
Query: 70 TFNILILGSSRA 35
+N I G+ A
Sbjct: 615 VYNYFIDGAGHA 626
Score = 59.3 bits (142), Expect = 3e-06
Identities = 73/338 (21%), Positives = 141/338 (41%), Gaps = 8/338 (2%)
Frame = -3
Query: 1174 DVAMSFYHERKEIGIAVDAFTYKKLATALCGVGKLEEAYEVLNDGISAGHRIIKPALFIL 995
D+A E +E G + D Y+ + LC + ++ + L + + H
Sbjct: 560 DIAARLLIEMQEKGHSPDRRLYRAVICCLCQMEDPDKLFYSLLEVQLSRHEPSCLVYNYF 619
Query: 994 ARALLNVGKVDLSVNLFDIAAATDCPPNTPLANAIVRSLCEAGKVDDAYGFLKKLKKNRA 815
+ GK +L+ +++++ PN I++S +AGK+ DA + + L R
Sbjct: 620 IDGAGHAGKPELARDVYEMMKRNGITPNLQSDILILQSYLKAGKIADALNYFRDLSNRRG 679
Query: 814 VPSRRIYSLVIEGFCDTRRVEMAYNLLMEMQHHGHAPGDFILKYVFCILCEVGHTELALN 635
+ R++++ ++ G C + A+N+ EM+ P + + +LC A+
Sbjct: 680 L-GRKLWNNMVVGLCKANKPGNAWNMFWEMRSTHLRPSMECYEELVKLLCSHRDYYKAIL 738
Query: 634 LINAHMY-GHPVDVKLYNRFIKIINGSGRPDIAIQVMERMMEENHTPNLKSYVSLLYGFL 458
L+ M G V + N + + R V M N K + SL G L
Sbjct: 739 LVEDLMQVGRQVSSFIGNVLLLHSLQTHR------VFSAWMHSRDLRNTKDH-SLALGDL 791
Query: 457 ISKSVVNAMNLFRELLVEKRILRSL-------YNVMVCGLCKIPNSDLALMYYQEMLGKR 299
I K+ +L ++L + ++R YN+++ L I DLA Y++ + K
Sbjct: 792 I-KTFSGCSDLESDILQIEELIRQCFPLDIYTYNLLLRKLT-ISEMDLACNYFERLCKKG 849
Query: 298 LQPSRACYVNLIRVLCVEGQFNLALELVGELKNKKYEL 185
+P+R Y L+ G+ + A + E+ +K ++L
Sbjct: 850 YEPNRWTYDILVHGFLKVGRSSEARRWMEEMFSKGFDL 887
>ref|XP_006385090.1| hypothetical protein POPTR_0004s23800g [Populus trichocarpa]
gi|550341858|gb|ERP62887.1| hypothetical protein
POPTR_0004s23800g [Populus trichocarpa]
Length = 711
Score = 207 bits (526), Expect = 9e-51
Identities = 122/389 (31%), Positives = 205/389 (52%), Gaps = 1/389 (0%)
Frame = -3
Query: 1216 MNAAVQFFCTGKFLDVAMSFYHERKEIGIAVDAFTYKKLATALCGVGKLEEAYEVLNDGI 1037
MNAA+ FFC ++VA Y + E G + + Y L +LCGVG EAY +L + I
Sbjct: 231 MNAALCFFCKVGMVEVAHKLYKSKLEFGFSPNTMAYNYLINSLCGVGSSGEAYSLLKNSI 290
Query: 1036 SAGHRIIKPALFILARALLNVGKVDLSVNLFDIAAATDCPPNTPLANAIVRSLCEAGKVD 857
G+ A +LA AL GK+D+ + L +A + + + ++ +LC AG+ +
Sbjct: 291 KQGYFPGTRAFSVLADALCRQGKLDMVMELVLLALSKNFRLSDSTYERVISALCRAGRFE 350
Query: 856 DAYGFLKKLKKNRAVPSRRIYSLVIEGFCDTRRVEMAYNLLMEMQHHGHAPGDFILKYVF 677
D Y + + V + Y +I GF + R +A LL+EMQ GH P + + VF
Sbjct: 351 DGYVMHGEFNRRNRVATVATYRQLIHGFSKSNRGHVASRLLIEMQDKGHQPTRKMFRAVF 410
Query: 676 CILCEVGHTEL-ALNLINAHMYGHPVDVKLYNRFIKIINGSGRPDIAIQVMERMMEENHT 500
LC++ + E+ L+ +Y H + K+YN FI S +P++A +V E M
Sbjct: 411 RCLCDMENPEMHFFKLLEMQLYRHKFNTKVYNFFIDEAGRSKKPELAREVFEMMQRNGIE 470
Query: 499 PNLKSYVSLLYGFLISKSVVNAMNLFRELLVEKRILRSLYNVMVCGLCKIPNSDLALMYY 320
PN+ S+V +L FL + + +A+N F + + ++ LY MV GLC++ +DLAL +
Sbjct: 471 PNVGSHVFILKAFLRNGRISDALN-FLKATHDSKMDEKLYRAMVVGLCEVKRTDLALDFL 529
Query: 319 QEMLGKRLQPSRACYVNLIRVLCVEGQFNLALELVGELKNKKYELRTYDYNVLLYYSFKI 140
+ M K L PS CY ++R+LC +++ ++++ +LK + +L + NVLL +S K
Sbjct: 530 KAMQSKELVPSMECYEAVVRLLCSTKNYDMVVKIINDLKKCQRKLTSLIGNVLLLHSLKS 589
Query: 139 SEVNHAWFFFTDMRNQKCPPNVSTFNILI 53
+E+ +W D++N ++S +LI
Sbjct: 590 NELYESWVRSRDVQND-TSSDLSNLGLLI 617
>ref|XP_002328803.1| predicted protein [Populus trichocarpa]
Length = 881
Score = 207 bits (526), Expect = 9e-51
Identities = 122/389 (31%), Positives = 205/389 (52%), Gaps = 1/389 (0%)
Frame = -3
Query: 1216 MNAAVQFFCTGKFLDVAMSFYHERKEIGIAVDAFTYKKLATALCGVGKLEEAYEVLNDGI 1037
MNAA+ FFC ++VA Y + E G + + Y L +LCGVG EAY +L + I
Sbjct: 401 MNAALCFFCKVGMVEVAHKLYKSKLEFGFSPNTMAYNYLINSLCGVGSSGEAYSLLKNSI 460
Query: 1036 SAGHRIIKPALFILARALLNVGKVDLSVNLFDIAAATDCPPNTPLANAIVRSLCEAGKVD 857
G+ A +LA AL GK+D+ + L +A + + + ++ +LC AG+ +
Sbjct: 461 KQGYFPGTRAFSVLADALCRQGKLDMVMELVLLALSKNFRLSDSTYERVISALCRAGRFE 520
Query: 856 DAYGFLKKLKKNRAVPSRRIYSLVIEGFCDTRRVEMAYNLLMEMQHHGHAPGDFILKYVF 677
D Y + + V + Y +I GF + R +A LL+EMQ GH P + + VF
Sbjct: 521 DGYVMHGEFNRRNRVATVATYRQLIHGFSKSNRGHVASRLLIEMQDKGHQPTRKMFRAVF 580
Query: 676 CILCEVGHTEL-ALNLINAHMYGHPVDVKLYNRFIKIINGSGRPDIAIQVMERMMEENHT 500
LC++ + E+ L+ +Y H + K+YN FI S +P++A +V E M
Sbjct: 581 RCLCDMENPEMHFFKLLEMQLYRHKFNTKVYNFFIDEAGRSKKPELAREVFEMMQRNGIE 640
Query: 499 PNLKSYVSLLYGFLISKSVVNAMNLFRELLVEKRILRSLYNVMVCGLCKIPNSDLALMYY 320
PN+ S+V +L FL + + +A+N F + + ++ LY MV GLC++ +DLAL +
Sbjct: 641 PNVGSHVFILKAFLRNGRISDALN-FLKATHDSKMDEKLYRAMVVGLCEVKRTDLALDFL 699
Query: 319 QEMLGKRLQPSRACYVNLIRVLCVEGQFNLALELVGELKNKKYELRTYDYNVLLYYSFKI 140
+ M K L PS CY ++R+LC +++ ++++ +LK + +L + NVLL +S K
Sbjct: 700 KAMQSKELVPSMECYEAVVRLLCSTKNYDMVVKIINDLKKCQRKLTSLIGNVLLLHSLKS 759
Query: 139 SEVNHAWFFFTDMRNQKCPPNVSTFNILI 53
+E+ +W D++N ++S +LI
Sbjct: 760 NELYESWVRSRDVQND-TSSDLSNLGLLI 787
>gb|EOY02481.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
cacao]
Length = 885
Score = 204 bits (519), Expect = 6e-50
Identities = 123/370 (33%), Positives = 195/370 (52%), Gaps = 4/370 (1%)
Frame = -3
Query: 1216 MNAAVQFFCTGKFLDVAMSFYHERKEIGIAVDAFTYKKLATALCGVGKLEEAYEVLNDGI 1037
MNA + F C +DVA+ Y+ R E G++++ Y L LCG G ++EAY VL + I
Sbjct: 396 MNAVLCFLCKAGMVDVAIELYNSRSEFGLSLNGMAYNYLINVLCGNGGIDEAYHVLRNSI 455
Query: 1036 SAGHRIIKPALFILARALLNVGKVDLSVNLFDIAAATDCPPNTPLANAIVRSLCEAGKVD 857
G+ K ILA AL GK+D L A + P+ L + + +LC+A +V+
Sbjct: 456 DEGYFPGKKTFAILADALCREGKLDKMKELVVFALERNVMPSNSLYDKFIEALCKAKRVE 515
Query: 856 DAY---GFLKKLKKNRAVPSRRIYSLVIEGFCDTRRVEMAYNLLMEMQHHGHAPGDFILK 686
D Y G L ++ K+ A R Y +I+GF + R ++A LL+EMQ GH + +
Sbjct: 516 DGYLIHGELSRINKDMA---RSTYFHLIQGFNKSNRGDIAARLLLEMQEKGHRVTRKLFR 572
Query: 685 YVFCILCEVGHTE-LALNLINAHMYGHPVDVKLYNRFIKIINGSGRPDIAIQVMERMMEE 509
V C LC++ E L+ + Y+ FI + RP++A +V E M+
Sbjct: 573 TVICCLCDMQSPENQFFKLLEIQLSRCEPSSHTYDFFIDGAGHAKRPELAREVFEMMLRS 632
Query: 508 NHTPNLKSYVSLLYGFLISKSVVNAMNLFRELLVEKRILRSLYNVMVCGLCKIPNSDLAL 329
P L S V +L+ +L + + +A+N F ++ +RI R LY+ MV GLCK +D AL
Sbjct: 633 GIKPALSSDVLMLHSYLRNDRISDALNFFNDVRQRRRIGRRLYSSMVVGLCKANRADYAL 692
Query: 328 MYYQEMLGKRLQPSRACYVNLIRVLCVEGQFNLALELVGELKNKKYELRTYDYNVLLYYS 149
+ +EM + PS CY LI++LC + ++L + LV EL+ + + ++ NVLL +S
Sbjct: 693 KFMEEMRANNVFPSMECYEYLIQLLCSKKCYDLVVGLVNELEKTRGHVTSFIGNVLLLHS 752
Query: 148 FKISEVNHAW 119
F+ ++ AW
Sbjct: 753 FRTKDLYRAW 762
Score = 102 bits (254), Expect = 3e-19
Identities = 81/360 (22%), Positives = 164/360 (45%), Gaps = 7/360 (1%)
Frame = -3
Query: 1087 CGVGKLEEAYEVLNDGISAGHRIIKPALFILARALLNVGKVDLSVNLFDIAAATDCPPNT 908
C KL+EA L G+ ++ L ++ AL K +V L + N
Sbjct: 264 CKQNKLDEAEAYLRRLAEGGNHVVGHGLSVIVDALCKCKKFKHAVTLLEEFREL----NV 319
Query: 907 PLANAI---VRSLCEAGKVDDAYGFLKKLKK-NRAVPSRRIYSLVIEGFCDTRRVEMAYN 740
P+ A +R+L + G+++ A FL K + VP Y+ ++ R+E +
Sbjct: 320 PMEQAYGMWLRNLVQHGRLNGALEFLMSKKSLDGYVPDVFRYNFLVLRLLRENRLEDVCD 379
Query: 739 LLMEMQHHGHAPGDFILKYVFCILCEVGHTELALNLINAHM-YGHPVDVKLYNRFIKIIN 563
LL+EM+ G P + V C LC+ G ++A+ L N+ +G ++ YN I ++
Sbjct: 380 LLIEMEEDGILPDKVTMNAVLCFLCKAGMVDVAIELYNSRSEFGLSLNGMAYNYLINVLC 439
Query: 562 GSGRPDIAIQVMERMMEENHTPNLKSYVSLLYGFLISKSVVNAMNLFRELLVEKRIL--R 389
G+G D A V+ ++E + P K++ ++L L + ++ M +E+ ++
Sbjct: 440 GNGGIDEAYHVLRNSIDEGYFPGKKTF-AILADALCREGKLDKMKELVVFALERNVMPSN 498
Query: 388 SLYNVMVCGLCKIPNSDLALMYYQEMLGKRLQPSRACYVNLIRVLCVEGQFNLALELVGE 209
SLY+ + LCK + + + E+ +R+ Y +LI+ + ++A L+ E
Sbjct: 499 SLYDKFIEALCKAKRVEDGYLIHGELSRINKDMARSTYFHLIQGFNKSNRGDIAARLLLE 558
Query: 208 LKNKKYELRTYDYNVLLYYSFKISEVNHAWFFFTDMRNQKCPPNVSTFNILILGSSRARR 29
++ K + + + ++ + + +F +++ +C P+ T++ I G+ A+R
Sbjct: 559 MQEKGHRVTRKLFRTVICCLCDMQSPENQFFKLLEIQLSRCEPSSHTYDFFIDGAGHAKR 618
>ref|XP_004243929.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71210-like
[Solanum lycopersicum]
Length = 896
Score = 204 bits (518), Expect = 8e-50
Identities = 124/377 (32%), Positives = 189/377 (50%), Gaps = 1/377 (0%)
Frame = -3
Query: 1216 MNAAVQFFCTGKFLDVAMSFYHERKEIGIAVDAFTYKKLATALCGVGKLEEAYEVLNDGI 1037
MN + FFC DVA+ Y R E G++V + TY L L G ++EAY VL + I
Sbjct: 407 MNVTLCFFCKVGMADVAVELYDSRAEFGLSVSSMTYNYLINTLLGDASVDEAYLVLKNAI 466
Query: 1036 SAGHRIIKPALFILARALLNVGKVDLSVNLFDIAAATDCPPNTPLANAIVRSLCEAGKVD 857
GH + I+A AL GK+D L + +C P+ N + +LC A +V+
Sbjct: 467 QQGHFPGRRTFSIIADALCREGKLDRVKELVLASLERNCVPSDSTYNKFISALCRASRVE 526
Query: 856 DAYGFLKKLKKNRAVPSRRIYSLVIEGFCDTRRVEMAYNLLMEMQHHGHAPGDFILKYVF 677
D Y L + V SR Y +I GF + R ++A LL+EMQ GH+P + + V
Sbjct: 527 DGYLVHGALSRFDKVTSRATYFDLISGFNKSSRGDIAARLLIEMQEKGHSPDRRLYRAVI 586
Query: 676 CILCEVGHTE-LALNLINAHMYGHPVDVKLYNRFIKIINGSGRPDIAIQVMERMMEENHT 500
C LC++ + L +L+ + H +YN FI +G+P++A V E M T
Sbjct: 587 CCLCQMEDPDKLFYSLLEVQLSRHEPSCLVYNYFIDGAGHAGKPELARDVYEMMKRNGIT 646
Query: 499 PNLKSYVSLLYGFLISKSVVNAMNLFRELLVEKRILRSLYNVMVCGLCKIPNSDLALMYY 320
PNL+S + +L +L + + +A+N F +L + + R L+N MV GLCK A +
Sbjct: 647 PNLQSDILILQSYLKAGKIADALNYFCDLSNRRGLGRKLWNNMVVGLCKANKPGNAWNMF 706
Query: 319 QEMLGKRLQPSRACYVNLIRVLCVEGQFNLALELVGELKNKKYELRTYDYNVLLYYSFKI 140
EM L+PS CY L+++LC + A+ LV +L ++ ++ NVLL +S +
Sbjct: 707 WEMRSTHLRPSMECYEELVKLLCSHRDYYKAILLVEDLMQVGRQVSSFIGNVLLLHSLQT 766
Query: 139 SEVNHAWFFFTDMRNQK 89
V AW D+ N K
Sbjct: 767 HRVFSAWMHSRDLSNTK 783
Score = 80.5 bits (197), Expect = 1e-12
Identities = 77/368 (20%), Positives = 157/368 (42%), Gaps = 5/368 (1%)
Frame = -3
Query: 1123 DAFTYKKLATALCGVGKLEEAYEVLNDGI-SAGHRIIKPALFILARALLNVGKVDLSVNL 947
DA T+ +LC +L+ A E L D + + G + + L AL K + +L
Sbjct: 261 DAITHAIFVKSLCQQTELDRAEEYLRDLLRNGGVGLSGIVVANLVDALCKNKKFTRAASL 320
Query: 946 FDIAAATDCPPNTPLANAIVRSLCEAGKVDDAYGFLKKLKK-NRAVPSRRIYSLVIEGFC 770
+ + ++ L AG++ +A FLK K + VP Y+ ++
Sbjct: 321 VQEFRESGLVSMEQAYSVWIKHLARAGELSEAVEFLKGKKLIDGYVPDVFRYNSLVCRLL 380
Query: 769 DTRRVEMAYNLLMEMQHHGHAPGDFILKYVFCILCEVGHTELALNLINAHM-YGHPVDVK 593
R+E Y+LLM+M+ P D + C C+VG ++A+ L ++ +G V
Sbjct: 381 RENRLEEVYDLLMDMKDQDIIPDDVTMNVTLCFFCKVGMADVAVELYDSRAEFGLSVSSM 440
Query: 592 LYNRFIKIINGSGRPDIAIQVMERMMEENHTPNLKSYVSLLYGFLISKSVVNAMNLFREL 413
YN I + G D A V++ +++ H P +++ S++ L + ++ +
Sbjct: 441 TYNYLINTLLGDASVDEAYLVLKNAIQQGHFPGRRTF-SIIADALCREGKLDRVKELVLA 499
Query: 412 LVEKRIL--RSLYNVMVCGLCKIPNSDLALMYYQEMLGKRLQPSRACYVNLIRVLCVEGQ 239
+E+ + S YN + LC+ + + + + SRA Y +LI +
Sbjct: 500 SLERNCVPSDSTYNKFISALCRASRVEDGYLVHGALSRFDKVTSRATYFDLISGFNKSSR 559
Query: 238 FNLALELVGELKNKKYELRTYDYNVLLYYSFKISEVNHAWFFFTDMRNQKCPPNVSTFNI 59
++A L+ E++ K + Y ++ ++ + + ++ +++ + P+ +N
Sbjct: 560 GDIAARLLIEMQEKGHSPDRRLYRAVICCLCQMEDPDKLFYSLLEVQLSRHEPSCLVYNY 619
Query: 58 LILGSSRA 35
I G+ A
Sbjct: 620 FIDGAGHA 627
>ref|XP_002532584.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223527693|gb|EEF29801.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 895
Score = 204 bits (518), Expect = 8e-50
Identities = 123/391 (31%), Positives = 203/391 (51%), Gaps = 1/391 (0%)
Frame = -3
Query: 1216 MNAAVQFFCTGKFLDVAMSFYHERKEIGIAVDAFTYKKLATALCGVGKLEEAYEVLNDGI 1037
MNAA+ FFC +DVA+ Y+ + E G++ T L +LC G +++AY VL
Sbjct: 405 MNAALSFFCKAGMVDVALDLYNCKSEFGLSPSTMTCNYLINSLCREGNVDDAYHVLKSSS 464
Query: 1036 SAGHRIIKPALFILARALLNVGKVDLSVNLFDIAAATDCPPNTPLANAIVRSLCEAGKVD 857
G+ K A +L AL GKV++ LF A + P+ + + + +LC+A +++
Sbjct: 465 EHGYFPGKRAFSMLTDALHREGKVEMMNELFFWALERNFIPSDSMYDKFISALCKARRLE 524
Query: 856 DAYGFLKKLKKNRAVPSRRIYSLVIEGFCDTRRVEMAYNLLMEMQHHGHAPGDFILKYVF 677
D Y +L + V + YS +I GF R ++A LL+EMQ GH P + + V
Sbjct: 525 DGYLIHGELNRFNRVAKKSTYSNLIHGFNKFNRGDIAARLLIEMQDKGHLPARTLFRAVI 584
Query: 676 CILCEVGHTELA-LNLINAHMYGHPVDVKLYNRFIKIINGSGRPDIAIQVMERMMEENHT 500
LCE+ E N ++ + + ++YN FI + +PDIA +V E M
Sbjct: 585 RSLCEMDDPETRFFNYLDMQLSRRDPNCQIYNFFIDGAGHAKKPDIARKVFEMMQRSGIE 644
Query: 499 PNLKSYVSLLYGFLISKSVVNAMNLFRELLVEKRILRSLYNVMVCGLCKIPNSDLALMYY 320
PN + + +L +L S+ + +A+N F + ++I R LYN MV GLCK+ D AL ++
Sbjct: 645 PNQSTNILMLQSYLKSERISDALNFFDAVGQRRKIGRKLYNTMVVGLCKVNKVDSALSFF 704
Query: 319 QEMLGKRLQPSRACYVNLIRVLCVEGQFNLALELVGELKNKKYELRTYDYNVLLYYSFKI 140
EM + PS CY LI +LC +++ A+ L+ +L+ + ++ N+LL +S K
Sbjct: 705 LEMQSNGMVPSVECYEVLIMLLCSNKRYSTAITLITDLEKFGRRVTSFIGNILLLHSLKS 764
Query: 139 SEVNHAWFFFTDMRNQKCPPNVSTFNILILG 47
E+ AW +++N+ ++ N+LILG
Sbjct: 765 DELYDAWLQVREVQNE------TSLNLLILG 789
Score = 104 bits (259), Expect = 8e-20
Identities = 85/399 (21%), Positives = 174/399 (43%), Gaps = 8/399 (2%)
Frame = -3
Query: 1177 LDVAMSFYHERKEIGIAV-DAFTYKKLATALCGVGKLEEA----YEVLNDGISAGHRIIK 1013
LD A+ F+ ++K + V + F Y L L +L EA E++ DG S +
Sbjct: 347 LDGALDFFQQKKTLESYVPEIFHYNALLCRLLKENRLTEACDLLMEMMEDGFSPDKVTMN 406
Query: 1012 PALFILARALLNVGKVDLSVNLFDIAAATDCPPNTPLANAIVRSLCEAGKVDDAYGFLKK 833
AL +A G VD++++L++ + P+T N ++ SLC G VDDAY LK
Sbjct: 407 AALSFFCKA----GMVDVALDLYNCKSEFGLSPSTMTCNYLINSLCREGNVDDAYHVLKS 462
Query: 832 LKKNRAVPSRRIYSLVIEGFCDTRRVEMAYNLLMEMQHHGHAPGDFILKYVFCILCEVGH 653
++ P +R +S++ + +VEM L P D + LC+
Sbjct: 463 SSEHGYFPGKRAFSMLTDALHREGKVEMMNELFFWALERNFIPSDSMYDKFISALCKARR 522
Query: 652 TELALNLINAHM--YGHPVDVKLYNRFIKIINGSGRPDIAIQVMERMMEENHTPNLKSYV 479
E LI+ + + Y+ I N R DIA +++ M ++ H P +
Sbjct: 523 LEDGY-LIHGELNRFNRVAKKSTYSNLIHGFNKFNRGDIAARLLIEMQDKGHLPARTLFR 581
Query: 478 SLLYGFLISKSVVNAMNLFRELLVEKRILR-SLYNVMVCGLCKIPNSDLALMYYQEMLGK 302
+++ + ++ + +R +YN + G D+A ++ M
Sbjct: 582 AVIRSLCEMDDPETRFFNYLDMQLSRRDPNCQIYNFFIDGAGHAKKPDIARKVFEMMQRS 641
Query: 301 RLQPSRACYVNLIRVLCVEGQFNLALELVGELKNKKYELRTYDYNVLLYYSFKISEVNHA 122
++P+++ + +++ + + AL + ++ ++ YN ++ K+++V+ A
Sbjct: 642 GIEPNQSTNILMLQSYLKSERISDALNFFDAVGQRR-KIGRKLYNTMVVGLCKVNKVDSA 700
Query: 121 WFFFTDMRNQKCPPNVSTFNILILGSSRARRFVKCLSML 5
FF +M++ P+V + +LI+ +R+ ++++
Sbjct: 701 LSFFLEMQSNGMVPSVECYEVLIMLLCSNKRYSTAITLI 739
>gb|EXB93154.1| hypothetical protein L484_024492 [Morus notabilis]
Length = 901
Score = 194 bits (492), Expect = 8e-47
Identities = 110/375 (29%), Positives = 190/375 (50%), Gaps = 1/375 (0%)
Frame = -3
Query: 1216 MNAAVQFFCTGKFLDVAMSFYHERKEIGIAVDAFTYKKLATALCGVGKLEEAYEVLNDGI 1037
MNAA+ FFC L A+ Y+ R E G+++++ Y L LCG G +++AY +L D I
Sbjct: 412 MNAALCFFCKAGMLSSALDLYNSRSEFGLSLNSMAYNYLINTLCGDGNIDQAYSMLQDSI 471
Query: 1036 SAGHRIIKPALFILARALLNVGKVDLSVNLFDIAAATDCPPNTPLANAIVRSLCEAGKVD 857
G+ + ILA L GK++ L A + P+ + + + +LC+A +++
Sbjct: 472 DQGYFPGRKVFSILADVLCREGKLEKMKELLLFALDRNIKPSRAIYDKFISALCKASRLE 531
Query: 856 DAYGFLKKLKKNRAVPSRRIYSLVIEGFCDTRRVEMAYNLLMEMQHHGHAPGDFILKYVF 677
D Y +++ + V +R Y +IE F + R ++A LL EMQ G+ P + V
Sbjct: 532 DGYLIYQEINELNEVAARSTYFSLIESFSRSNRGDIAARLLFEMQERGYKPHRILFSNVI 591
Query: 676 CILCEVGH-TELALNLINAHMYGHPVDVKLYNRFIKIINGSGRPDIAIQVMERMMEENHT 500
LC + + +L L L+ H+ ++YN FI + P++A +V E ++
Sbjct: 592 SSLCRMENPKKLVLELLELHLSRVETSSRIYNLFIYGAGHAKIPELAREVYEMILRSGRE 651
Query: 499 PNLKSYVSLLYGFLISKSVVNAMNLFRELLVEKRILRSLYNVMVCGLCKIPNSDLALMYY 320
P L S + +L +L S +++A+N F L + R L N MV GLC+ D+AL ++
Sbjct: 652 PTLSSDILMLQSYLKSDKILDAVNFFNSLRGRRNFGRKLCNAMVTGLCRANRLDIALEFF 711
Query: 319 QEMLGKRLQPSRACYVNLIRVLCVEGQFNLALELVGELKNKKYELRTYDYNVLLYYSFKI 140
++ + PS CY LI++LC + ++++A+ LV E + L + N LL +S +
Sbjct: 712 KDAKNNGVIPSIECYELLIKLLCSKRRYSMAITLVNEFEKTGRVLTPFIGNTLLCHSLQG 771
Query: 139 SEVNHAWFFFTDMRN 95
E+ W ++ N
Sbjct: 772 QELYDVWIHRMEVEN 786
Score = 87.0 bits (214), Expect = 1e-14
Identities = 78/365 (21%), Positives = 153/365 (41%), Gaps = 4/365 (1%)
Frame = -3
Query: 1114 TYKKLATALCGVGKLEEAYEVLNDGISAGHRIIKPALFILARALLNVGKVDLSVNLFDIA 935
T + + C +EA L + + G + AL L L + D + L +
Sbjct: 270 TCSVMMKSFCKQKLFDEAEAHLREMVCEGRDLNGYALHALVGGLCANNEFDHAKKLIEEF 329
Query: 934 AATDCPPNTPLANAIVRSLCEAGKVDDAYGFLKKLKK-NRAVPSRRIYSLVIEGFCDTRR 758
P + V+ L AG++D A FLKK K VP Y+++I R
Sbjct: 330 QELGTIPMMQAYDVWVKELVHAGRLDAALEFLKKQKSIGGYVPDMFRYNMLICRLLWENR 389
Query: 757 VEMAYNLLMEMQHHGHAPGDFILKYVFCILCEVGHTELALNLINAHM-YGHPVDVKLYNR 581
+E + LL+EM+ +P D + C C+ G AL+L N+ +G ++ YN
Sbjct: 390 LEESCELLIEMKESKISPDDDTMNAALCFFCKAGMLSSALDLYNSRSEFGLSLNSMAYNY 449
Query: 580 FIKIINGSGRPDIAIQVMERMMEENHTPNLKSYVSLLYGFLISKSVVNAMNLFRELLVEK 401
I + G G D A +++ +++ + P K + S+L L + + M +++
Sbjct: 450 LINTLCGDGNIDQAYSMLQDSIDQGYFPGRKVF-SILADVLCREGKLEKMKELLLFALDR 508
Query: 400 RI--LRSLYNVMVCGLCKIPNSDLALMYYQEMLGKRLQPSRACYVNLIRVLCVEGQFNLA 227
I R++Y+ + LCK + + YQE+ +R+ Y +LI + ++A
Sbjct: 509 NIKPSRAIYDKFISALCKASRLEDGYLIYQEINELNEVAARSTYFSLIESFSRSNRGDIA 568
Query: 226 LELVGELKNKKYELRTYDYNVLLYYSFKISEVNHAWFFFTDMRNQKCPPNVSTFNILILG 47
L+ E++ + Y+ ++ ++ ++ ++ + + +N+ I G
Sbjct: 569 ARLLFEMQERGYKPHRILFSNVISSLCRMENPKKLVLELLELHLSRVETSSRIYNLFIYG 628
Query: 46 SSRAR 32
+ A+
Sbjct: 629 AGHAK 633
Score = 69.7 bits (169), Expect = 2e-09
Identities = 87/412 (21%), Positives = 162/412 (39%), Gaps = 16/412 (3%)
Frame = -3
Query: 1216 MNAAVQFFCTGKFLDVAMSFYHERKEIGIAVDAFTYKKLATALCGVGKLEEAYEVLNDGI 1037
++A V C D A E +E+G Y L G+L+ A E L
Sbjct: 306 LHALVGGLCANNEFDHAKKLIEEFQELGTIPMMQAYDVWVKELVHAGRLDAALEFLKKQK 365
Query: 1036 SAGHRIIKPALF---ILARALLNVGKVDLSVNLFDIAAATDCPPNTPLANAIVRSLCEAG 866
S G + P +F +L LL +++ S L + P+ NA + C+AG
Sbjct: 366 SIGGYV--PDMFRYNMLICRLLWENRLEESCELLIEMKESKISPDDDTMNAALCFFCKAG 423
Query: 865 KVDDAYGFLKKLKKNRAVPSRRIYSLVIEGFCDTRRVEMAYNLLMEMQHHGHAPGDFILK 686
+ A + + Y+ +I C ++ AY++L + G+ PG +
Sbjct: 424 MLSSALDLYNSRSEFGLSLNSMAYNYLINTLCGDGNIDQAYSMLQDSIDQGYFPGRKVFS 483
Query: 685 YVFCILCEVGHTELALNLINAHMYGHPVDVK----LYNRFIKIINGSGRPDIAIQVMERM 518
+ +LC G E L+ ++ ++K +Y++FI + + R + + + +
Sbjct: 484 ILADVLCREGKLEKMKELL---LFALDRNIKPSRAIYDKFISALCKASRLEDGYLIYQEI 540
Query: 517 MEENHTPNLKSYVSLLYGFLIS-KSVVNAMNLFRELLVEKRILRSLYNVMVCGLCKIPNS 341
E N +Y SL+ F S + + A LF + R L++ ++ LC++ N
Sbjct: 541 NELNEVAARSTYFSLIESFSRSNRGDIAARLLFEMQERGYKPHRILFSNVISSLCRMENP 600
Query: 340 DLALMYYQEMLGKRLQPSRACYVNLIRVLCVEGQFNLALELVGELKNKKYEL-------R 182
++ E+ R++ S Y I + + EL + YE+
Sbjct: 601 KKLVLELLELHLSRVETSSRIYNLFI--------YGAGHAKIPELAREVYEMILRSGREP 652
Query: 181 TYDYNVLLYYSF-KISEVNHAWFFFTDMRNQKCPPNVSTFNILILGSSRARR 29
T ++L+ S+ K ++ A FF +R ++ N ++ G RA R
Sbjct: 653 TLSSDILMLQSYLKSDKILDAVNFFNSLRGRR-NFGRKLCNAMVTGLCRANR 703
Score = 68.2 bits (165), Expect = 7e-09
Identities = 76/359 (21%), Positives = 141/359 (39%), Gaps = 4/359 (1%)
Frame = -3
Query: 1111 YKKLATALCGVGKLEEAYEVLNDGISAGHRIIKPALFILARALLNVGKVDLSVNLFDIAA 932
Y K +ALC +LE+ Y + + + F L + + D++ L
Sbjct: 517 YDKFISALCKASRLEDGYLIYQEINELNEVAARSTYFSLIESFSRSNRGDIAARLLFEMQ 576
Query: 931 ATDCPPNTPLANAIVRSLCEAGKVDDAYGFLKKLKKNRAVPSRRIYSLVIEGFCDTRRVE 752
P+ L + ++ SLC L +L +R S RIY+L I G + E
Sbjct: 577 ERGYKPHRILFSNVISSLCRMENPKKLVLELLELHLSRVETSSRIYNLFIYGAGHAKIPE 636
Query: 751 MAYNLLMEMQHHGHAP---GDFILKYVFCILCEVGHTELALNLINAHMYGHPVDVKLYNR 581
+A + + G P D ++ + ++ A+N N+ KL N
Sbjct: 637 LAREVYEMILRSGREPTLSSDILMLQSYLKSDKILD---AVNFFNSLRGRRNFGRKLCNA 693
Query: 580 FIKIINGSGRPDIAIQVMERMMEENHTPNLKSYVSLLYGFLISKSVVNAMNLFRELLVEK 401
+ + + R DIA++ + P+++ Y L+ + A+ L E
Sbjct: 694 MVTGLCRANRLDIALEFFKDAKNNGVIPSIECYELLIKLLCSKRRYSMAITLVNEFEKTG 753
Query: 400 RILRSLY-NVMVCGLCKIPNSDLALMYYQEMLGKRLQPSRACYVNLIRVLCVEGQFNLAL 224
R+L N ++C + +L ++ M + LI V C +F+ +
Sbjct: 754 RVLTPFIGNTLLCH--SLQGQELYDVWIHRMEVENGNYENPMLGLLIGVFCSRVKFSQHI 811
Query: 223 ELVGELKNKKYELRTYDYNVLLYYSFKISEVNHAWFFFTDMRNQKCPPNVSTFNILILG 47
+ + E+ K + + + YN+LL + ++HA F MR + PN T++IL+ G
Sbjct: 812 DKLVEVIEKCFPVDLFTYNLLLR-KLSLINIDHACEMFHRMRRRGYEPNQWTYDILVRG 869
>ref|XP_004291546.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71210-like
[Fragaria vesca subsp. vesca]
Length = 630
Score = 192 bits (488), Expect = 2e-46
Identities = 112/377 (29%), Positives = 187/377 (49%), Gaps = 4/377 (1%)
Frame = -3
Query: 1216 MNAAVQFFCTGKFLDVAMSFYHERKEIGIAVDAFTYKKLATALCGVGKLEEAYEVLNDGI 1037
MN + FFC LD+A+ Y+ R E G+ ++ Y L CG G +EAY++L +
Sbjct: 138 MNVVLCFFCKVGLLDIAVELYNSRSEFGLTPNSMAYNYLINTFCGNGSADEAYKMLECSL 197
Query: 1036 SAGHRIIKPALFILARALLNVGKVDLSVNLFDIAAATDCPPNTPLANAIVRSLCEAGKVD 857
G+ + ILA AL GK+D L A + P+ + + +LC +VD
Sbjct: 198 DQGYFPGRKTFSILADALCREGKLDKMKQLVLFALERNLMPSGSTYDKFIATLCRTNRVD 257
Query: 856 DAYGFLKKL---KKNRAVPSRRIYSLVIEGFCDTRRVEMAYNLLMEMQHHGHAPGDFILK 686
DAY ++L + V Y +I FC + E+A LL+EMQ HGH + +
Sbjct: 258 DAYLIYEQLIRISEASLVCRESTYISLINSFCQVNKGEIAARLLIEMQQHGHLANHKVFR 317
Query: 685 YVFCILCEVGHTELA-LNLINAHMYGHPVDVKLYNRFIKIINGSGRPDIAIQVMERMMEE 509
V C LC + + + L+ + ++YN FI + RPD+A +V++ M +
Sbjct: 318 DVICSLCNTENPDNQFMTLLEMQLSCQKGTTRIYNYFIYGAGHARRPDLARKVLQMMQQS 377
Query: 508 NHTPNLKSYVSLLYGFLISKSVVNAMNLFRELLVEKRILRSLYNVMVCGLCKIPNSDLAL 329
NL++ V +L+ +L + +A+N F +L + + R LY++M+ G+ K D AL
Sbjct: 378 GIVANLRTDVLMLHSYLKKEKYSDALNYFNDLRQRRNLGRRLYSLMIMGMSKARKPDFAL 437
Query: 328 MYYQEMLGKRLQPSRACYVNLIRVLCVEGQFNLALELVGELKNKKYELRTYDYNVLLYYS 149
+EM K + PS CY LI+ LC +++ A+ L+ +L+ ++ ++ N+LL S
Sbjct: 438 ALLEEMREKGIVPSNNCYEFLIQSLCWNNEYDTAVSLINDLEKVGRQITSFIGNILLLNS 497
Query: 148 FKISEVNHAWFFFTDMR 98
K E+ AW D++
Sbjct: 498 LKSQELYKAWVRLRDLQ 514
Score = 67.0 bits (162), Expect = 1e-08
Identities = 90/414 (21%), Positives = 168/414 (40%), Gaps = 13/414 (3%)
Frame = -3
Query: 1204 VQFFCTGKFLDVAMSFYHERKEIGIAVDAFTYKKLATALCGVGKLEEAYEVLNDGISAGH 1025
V+ C K A +E ++ + + Y L G+L++A E L S
Sbjct: 36 VRALCQHKNFKHAAKLMNEFHDLEVVLMGRAYAVWIGDLAKAGRLDQALEFLLSKQSLEG 95
Query: 1024 RIIKPALF-ILARALLNVGKVDLSVNLFDIAAATDCPPNTPLANAIVRSLCEAGKVDDAY 848
+ + IL LL +++ +L + P+T N ++ C+ G +D A
Sbjct: 96 YVPDVCRYNILISELLREARLEEVCDLILEMKEREVSPDTVTMNVVLCFFCKVGLLDIAV 155
Query: 847 GFLKKLKKNRAVPSRRIYSLVIEGFCDTRRVEMAYNLLMEMQHHGHAPGDFILKYVFCIL 668
+ P+ Y+ +I FC + AY +L G+ PG + L
Sbjct: 156 ELYNSRSEFGLTPNSMAYNYLINTFCGNGSADEAYKMLECSLDQGYFPGRKTFSILADAL 215
Query: 667 CEVGHTELALNLINAHMYGHPV-DVKLYNRFIKIINGSGRPDIAIQVME---RMMEENHT 500
C G + L+ + + + Y++FI + + R D A + E R+ E +
Sbjct: 216 CREGKLDKMKQLVLFALERNLMPSGSTYDKFIATLCRTNRVDDAYLIYEQLIRISEASLV 275
Query: 499 PNLKSYVSLLYGFLISKSVVNAMNLFRELLVEKR-----ILRSLYNVMVCGLCKIPNSDL 335
+Y+SL+ F VN + LL+E + ++ ++C LC N D
Sbjct: 276 CRESTYISLINSF----CQVNKGEIAARLLIEMQQHGHLANHKVFRDVICSLCNTENPDN 331
Query: 334 ALMYYQEMLGKRLQPSRACYVNLIRVLCVEGQFNLALELVGELKNKKY--ELRTYDYNVL 161
M EM + + Y I + +LA +++ ++ LRT +VL
Sbjct: 332 QFMTLLEMQLSCQKGTTRIYNYFIYGAGHARRPDLARKVLQMMQQSGIVANLRT---DVL 388
Query: 160 LYYSF-KISEVNHAWFFFTDMRNQKCPPNVSTFNILILGSSRARRFVKCLSMLE 2
+ +S+ K + + A +F D+R Q+ ++++I+G S+AR+ L++LE
Sbjct: 389 MLHSYLKKEKYSDALNYFNDLR-QRRNLGRRLYSLMIMGMSKARKPDFALALLE 441
>ref|NP_177277.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75151609|sp|Q8GZA6.1|PP113_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g71210 gi|26449321|dbj|BAC41788.1| unknown protein
[Arabidopsis thaliana] gi|29029058|gb|AAO64908.1|
At1g71210 [Arabidopsis thaliana]
gi|332197052|gb|AEE35173.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 879
Score = 191 bits (486), Expect = 4e-46
Identities = 127/397 (31%), Positives = 197/397 (49%), Gaps = 4/397 (1%)
Frame = -3
Query: 1216 MNAAVQFFCTGKFLDVAMSFYHERKEIGIAVDAFTYKKLATALCGVGKLEEAYEVLNDGI 1037
MNAA+ FFC F+D A+ Y R EIG A A +Y L LC +E+AY+VL I
Sbjct: 395 MNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAI 454
Query: 1036 SAGHRIIKPALFILARALLNVGKVDLSVNLFDIAAATDCPPNTPLANAIVRSLCEAGKVD 857
GH + L AL GK D++ L AA D P I+ +LC+ GKV+
Sbjct: 455 DRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVE 514
Query: 856 DAYGFLKKLKKNRAVPSRRIYSLVIEGFCDTRRVEMAYNLLMEMQHHGHAPGDFILKYVF 677
DA + K+ S ++++ +I G R ++A L++ MQ G+ P + + V
Sbjct: 515 DALMINELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVI 574
Query: 676 CILCEV--GHTELALNLINAHMYGHPVDVKLYNRFIKIINGSGRPDIAIQVMERMMEENH 503
+CE+ G L+ + V+ YN FI+ +G+P +A V + M +
Sbjct: 575 QCVCEMESGEKNFFTTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGI 634
Query: 502 TPNLKSYVSLLYGFLISKSVVNAMNLFRELLVEKRILRSLYNVMVCGLCKIPNSDLALMY 323
TP + S + +L +L ++ + +A++ F +L + + + LY VM+ GLCK D A+ +
Sbjct: 635 TPTVASNILMLQSYLKNEKIADALHFFHDLREQGKTKKRLYQVMIVGLCKANKLDDAMHF 694
Query: 322 YQEMLGKRLQPSRACYVNLIRVLCVEGQFNLALELVGELKNKKYELRTYDYNVLLYYSFK 143
+EM G+ LQPS CY I+ LC E +++ A+ LV E + + + NVLL+ + K
Sbjct: 695 LEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGLVNEFRKSGRRITAFIGNVLLHNAMK 754
Query: 142 ISEVNHAWFFFTDMRN--QKCPPNVSTFNILILGSSR 38
V AW T MRN K P S ++ L S R
Sbjct: 755 SKGVYEAW---TRMRNIEDKIPEMKSLGELIGLFSGR 788
Score = 69.7 bits (169), Expect = 2e-09
Identities = 85/407 (20%), Positives = 158/407 (38%), Gaps = 40/407 (9%)
Frame = -3
Query: 1102 LATALCGVGKLEEAYEVLNDGISAGHRIIKPALFILARALLNVGKVDLSVNLFD-IAAAT 926
L ALC K +EA ++L++ G + A I RAL+ G ++ + I+
Sbjct: 292 LVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLE 351
Query: 925 DCPPNTPLANAIVRSLCEAGKVDDAYGFLKKLKKNRAVPSRRIYSLVIEGFCDTRRVEMA 746
C N++V L + +D Y L ++ P+++ + + FC V+ A
Sbjct: 352 GCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEA 411
Query: 745 YNLLMEMQHHGHAPGDFILKYVFCILCEVGHTELALNLINAHM-YGHPVDVKLYNRFIKI 569
L G AP Y+ LC E A +++ + GH + K ++
Sbjct: 412 LELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNA 471
Query: 568 INGSGRPDIAIQVMERMMEENHTPNLKSYVSLLYGFLISKSVVNAMNLFRELLVEKRILR 389
+ G+PD+A +++ E + P + ++ V +A+ + EL + +
Sbjct: 472 LCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDAL-MINELFNKSGVDT 530
Query: 388 S--LYNVMVCGLCKIPNSDLALMYYQEMLGKRLQPSRACYVNLIRVLC--VEGQ------ 239
S ++ ++ G + D+A M K P+R+ Y N+I+ +C G+
Sbjct: 531 SFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFFTT 590
Query: 238 ---------------FNLALELVGELKNKKYELRTYDY------------NVLLYYSF-K 143
+NL +E G K YD N+L+ S+ K
Sbjct: 591 LLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLK 650
Query: 142 ISEVNHAWFFFTDMRNQKCPPNVSTFNILILGSSRARRFVKCLSMLE 2
++ A FF D+R Q + ++I+G +A + + LE
Sbjct: 651 NEKIADALHFFHDLREQG-KTKKRLYQVMIVGLCKANKLDDAMHFLE 696
>gb|AAG51690.1|AC016972_9 hypothetical protein; 66200-63606 [Arabidopsis thaliana]
Length = 864
Score = 191 bits (486), Expect = 4e-46
Identities = 127/397 (31%), Positives = 197/397 (49%), Gaps = 4/397 (1%)
Frame = -3
Query: 1216 MNAAVQFFCTGKFLDVAMSFYHERKEIGIAVDAFTYKKLATALCGVGKLEEAYEVLNDGI 1037
MNAA+ FFC F+D A+ Y R EIG A A +Y L LC +E+AY+VL I
Sbjct: 380 MNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAI 439
Query: 1036 SAGHRIIKPALFILARALLNVGKVDLSVNLFDIAAATDCPPNTPLANAIVRSLCEAGKVD 857
GH + L AL GK D++ L AA D P I+ +LC+ GKV+
Sbjct: 440 DRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVE 499
Query: 856 DAYGFLKKLKKNRAVPSRRIYSLVIEGFCDTRRVEMAYNLLMEMQHHGHAPGDFILKYVF 677
DA + K+ S ++++ +I G R ++A L++ MQ G+ P + + V
Sbjct: 500 DALMINELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVI 559
Query: 676 CILCEV--GHTELALNLINAHMYGHPVDVKLYNRFIKIINGSGRPDIAIQVMERMMEENH 503
+CE+ G L+ + V+ YN FI+ +G+P +A V + M +
Sbjct: 560 QCVCEMESGEKNFFTTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGI 619
Query: 502 TPNLKSYVSLLYGFLISKSVVNAMNLFRELLVEKRILRSLYNVMVCGLCKIPNSDLALMY 323
TP + S + +L +L ++ + +A++ F +L + + + LY VM+ GLCK D A+ +
Sbjct: 620 TPTVASNILMLQSYLKNEKIADALHFFHDLREQGKTKKRLYQVMIVGLCKANKLDDAMHF 679
Query: 322 YQEMLGKRLQPSRACYVNLIRVLCVEGQFNLALELVGELKNKKYELRTYDYNVLLYYSFK 143
+EM G+ LQPS CY I+ LC E +++ A+ LV E + + + NVLL+ + K
Sbjct: 680 LEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGLVNEFRKSGRRITAFIGNVLLHNAMK 739
Query: 142 ISEVNHAWFFFTDMRN--QKCPPNVSTFNILILGSSR 38
V AW T MRN K P S ++ L S R
Sbjct: 740 SKGVYEAW---TRMRNIEDKIPEMKSLGELIGLFSGR 773
Score = 69.7 bits (169), Expect = 2e-09
Identities = 85/407 (20%), Positives = 158/407 (38%), Gaps = 40/407 (9%)
Frame = -3
Query: 1102 LATALCGVGKLEEAYEVLNDGISAGHRIIKPALFILARALLNVGKVDLSVNLFD-IAAAT 926
L ALC K +EA ++L++ G + A I RAL+ G ++ + I+
Sbjct: 277 LVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLE 336
Query: 925 DCPPNTPLANAIVRSLCEAGKVDDAYGFLKKLKKNRAVPSRRIYSLVIEGFCDTRRVEMA 746
C N++V L + +D Y L ++ P+++ + + FC V+ A
Sbjct: 337 GCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEA 396
Query: 745 YNLLMEMQHHGHAPGDFILKYVFCILCEVGHTELALNLINAHM-YGHPVDVKLYNRFIKI 569
L G AP Y+ LC E A +++ + GH + K ++
Sbjct: 397 LELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNA 456
Query: 568 INGSGRPDIAIQVMERMMEENHTPNLKSYVSLLYGFLISKSVVNAMNLFRELLVEKRILR 389
+ G+PD+A +++ E + P + ++ V +A+ + EL + +
Sbjct: 457 LCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDAL-MINELFNKSGVDT 515
Query: 388 S--LYNVMVCGLCKIPNSDLALMYYQEMLGKRLQPSRACYVNLIRVLC--VEGQ------ 239
S ++ ++ G + D+A M K P+R+ Y N+I+ +C G+
Sbjct: 516 SFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFFTT 575
Query: 238 ---------------FNLALELVGELKNKKYELRTYDY------------NVLLYYSF-K 143
+NL +E G K YD N+L+ S+ K
Sbjct: 576 LLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLK 635
Query: 142 ISEVNHAWFFFTDMRNQKCPPNVSTFNILILGSSRARRFVKCLSMLE 2
++ A FF D+R Q + ++I+G +A + + LE
Sbjct: 636 NEKIADALHFFHDLREQG-KTKKRLYQVMIVGLCKANKLDDAMHFLE 681
>ref|XP_002888826.1| hypothetical protein ARALYDRAFT_894959 [Arabidopsis lyrata subsp.
lyrata] gi|297334667|gb|EFH65085.1| hypothetical protein
ARALYDRAFT_894959 [Arabidopsis lyrata subsp. lyrata]
Length = 868
Score = 187 bits (474), Expect = 1e-44
Identities = 117/377 (31%), Positives = 189/377 (50%), Gaps = 2/377 (0%)
Frame = -3
Query: 1216 MNAAVQFFCTGKFLDVAMSFYHERKEIGIAVDAFTYKKLATALCGVGKLEEAYEVLNDGI 1037
MNAA+ FFC F+D A+ Y R EIG A A +Y L LC +E+AY+VL +
Sbjct: 384 MNAALCFFCKAGFVDEALELYRSRSEIGFAPTATSYNYLIHTLCANESVEQAYDVLKGAM 443
Query: 1036 SAGHRIIKPALFILARALLNVGKVDLSVNLFDIAAATDCPPNTPLANAIVRSLCEAGKVD 857
GH + L AL GK D++ L AA D P I+ +LC+ GKV+
Sbjct: 444 DRGHFLGGKTFSTLTNALCWKGKPDMAKELVIAAAERDLLPKRIAGCKIISALCDIGKVE 503
Query: 856 DAYGFLKKLKKNRAVPSRRIYSLVIEGFCDTRRVEMAYNLLMEMQHHGHAPGDFILKYVF 677
DA + K+ S ++++ +I G R ++A L++ MQ G+ P + + V
Sbjct: 504 DALMINELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVI 563
Query: 676 CILCEV--GHTELALNLINAHMYGHPVDVKLYNRFIKIINGSGRPDIAIQVMERMMEENH 503
+CE+ G L+ + V+ YN FI+ +G+P +A V + M +
Sbjct: 564 QCVCEMESGEKNFFTTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGI 623
Query: 502 TPNLKSYVSLLYGFLISKSVVNAMNLFRELLVEKRILRSLYNVMVCGLCKIPNSDLALMY 323
TP L S + +L +L ++ + +A++ F +L + + + LY VM+ GLCK D A+ +
Sbjct: 624 TPTLDSNILMLQSYLKNEKIADALHFFHDLREKGKTKKRLYQVMIVGLCKANRLDDAMHF 683
Query: 322 YQEMLGKRLQPSRACYVNLIRVLCVEGQFNLALELVGELKNKKYELRTYDYNVLLYYSFK 143
+EM G+ L+PS CY I+ LC E +++ A+ LV E + + + NVLL+ + K
Sbjct: 684 LEEMKGEGLRPSIECYEVNIQKLCNEEKYDEAVGLVNEFRKSGRRITAFIGNVLLHNAMK 743
Query: 142 ISEVNHAWFFFTDMRNQ 92
V AW D+ ++
Sbjct: 744 SKGVYEAWTRMRDVEDK 760
Score = 69.3 bits (168), Expect = 3e-09
Identities = 90/410 (21%), Positives = 163/410 (39%), Gaps = 43/410 (10%)
Frame = -3
Query: 1102 LATALCGVGKLEEAYEVLNDGISAGHRIIKPALFILARALLNVGKVDLSVN--------- 950
L ALC K +EA ++L++ G + A I RAL+ G ++ +V+
Sbjct: 281 LVDALCSKRKFQEATKLLDEIKVLGTVNMDRAYNIWIRALIGAGFLNNTVDFLQKISPLE 340
Query: 949 ------------LFDIAAATDC---------------PPNTPLANAIVRSLCEAGKVDDA 851
+F + D PN NA + C+AG VD+A
Sbjct: 341 GCELEVFRYNSMVFQLLKENDLNGVYDILTEMLVRGVSPNKKTMNAALCFFCKAGFVDEA 400
Query: 850 YGFLKKLKKNRAVPSRRIYSLVIEGFCDTRRVEMAYNLLMEMQHHGHAPGDFILKYVFCI 671
+ + P+ Y+ +I C VE AY++L GH G +
Sbjct: 401 LELYRSRSEIGFAPTATSYNYLIHTLCANESVEQAYDVLKGAMDRGHFLGGKTFSTLTNA 460
Query: 670 LCEVGHTELALNLINAHMYGHPVDVKLYN-RFIKIINGSGRPDIAIQVMERMMEENHTPN 494
LC G ++A L+ A + ++ + I + G+ + A+ + E + +
Sbjct: 461 LCWKGKPDMAKELVIAAAERDLLPKRIAGCKIISALCDIGKVEDALMINELFNKSGVDTS 520
Query: 493 LKSYVSLLYGFL-ISKSVVNAMNLFRELLVEKRILRSLYNVMVCGLCKIPNSD----LAL 329
K + SL+YG + + + + A + R RSLY ++ +C++ + + L
Sbjct: 521 FKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFFTTL 580
Query: 328 MYYQEMLGKRLQPSRACYVNLIRVLCVEGQFNLALELVGELKNKKYELRTYDYNVLLYYS 149
+ +Q L + Y I G+ LA LV ++ ++ T D N+L+ S
Sbjct: 581 LKFQLSLWEH---KVQAYNLFIEGAGFAGKPKLA-RLVYDMMDRDGITPTLDSNILMLQS 636
Query: 148 F-KISEVNHAWFFFTDMRNQKCPPNVSTFNILILGSSRARRFVKCLSMLE 2
+ K ++ A FF D+R +K + ++I+G +A R + LE
Sbjct: 637 YLKNEKIADALHFFHDLR-EKGKTKKRLYQVMIVGLCKANRLDDAMHFLE 685
>ref|XP_004144802.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71210-like
[Cucumis sativus]
Length = 913
Score = 186 bits (472), Expect = 2e-44
Identities = 115/367 (31%), Positives = 183/367 (49%), Gaps = 1/367 (0%)
Frame = -3
Query: 1216 MNAAVQFFCTGKFLDVAMSFYHERKEIGIAVDAFTYKKLATALCGVGKLEEAYEVLNDGI 1037
M+AA+ F C ++VA+ Y+ E GI+ + Y L ALC G +EAY +L I
Sbjct: 415 MDAAMCFLCKAGMVEVALELYNSNFEFGISPNTMAYNYLINALCRDGSTDEAYRILKCSI 474
Query: 1036 SAGHRIIKPALFILARALLNVGKVDLSVNLFDIAAATDCPPNTPLANAIVRSLCEAGKVD 857
G+ K ILA AL GK+D L A +C PN + + +LC A +V+
Sbjct: 475 YEGYFPGKKTFSILASALCREGKLDKMKELVIFALERNCMPNDSTYDKFIYALCRARRVE 534
Query: 856 DAYGFLKKLKKNRAVPSRRIYSLVIEGFCDTRRVEMAYNLLMEMQHHGHAPGDFILKYVF 677
D Y +L + V +R Y ++IEGF + R ++A LL+EM GH P + + V
Sbjct: 535 DGYLIHCELNRINVVATRSTYFVLIEGFIKSGRGDIAARLLIEMLEKGHNPPRGLFRSVI 594
Query: 676 CILCEVGHTELA-LNLINAHMYGHPVDVKLYNRFIKIINGSGRPDIAIQVMERMMEENHT 500
L E+ + E NL+ + + ++YN FI + +P++A +V M+
Sbjct: 595 LCLIEMENMEKQFFNLLELQLSCQEPNSEVYNNFIYAAGRAKKPELANEVYHMMLRNGIQ 654
Query: 499 PNLKSYVSLLYGFLISKSVVNAMNLFRELLVEKRILRSLYNVMVCGLCKIPNSDLALMYY 320
PNL S + LL G+L S+ + +A+ L + I R + NV+V GLCK ++LA ++
Sbjct: 655 PNLSSDILLLRGYLYSERISDALIFLSNLSQTRTIGRKISNVVVVGLCKANKTNLAFDFW 714
Query: 319 QEMLGKRLQPSRACYVNLIRVLCVEGQFNLALELVGELKNKKYELRTYDYNVLLYYSFKI 140
+ + K PS CY L + C +++ + L+ +L L ++ NVLLY S K
Sbjct: 715 KHLRDKGTVPSIECYEELAKHFCQNERYDAVVNLLNDLDKVGRPLTSFLGNVLLYSSLKT 774
Query: 139 SEVNHAW 119
++ AW
Sbjct: 775 QKLYKAW 781
Score = 78.6 bits (192), Expect = 5e-12
Identities = 79/393 (20%), Positives = 156/393 (39%), Gaps = 4/393 (1%)
Frame = -3
Query: 1195 FCTGKFLDVAMSFYHERKEIGIAVDAFTYKKLATALCGVGKLEEAYEVLNDGISAGHRII 1016
FC LD A +F H+ + G ++ L A C G E A++++
Sbjct: 281 FCKQNQLDEAETFLHDLVDSGKKLNGRMLDLLVGAFCQSGNFERAWKLVE---------- 330
Query: 1015 KPALFILARALLNVGKVDLSVNLFDIAAATDCPPNTPLANAIVRSLCEAGKVDDAYGFLK 836
DL + + + + L AGK++ A FL
Sbjct: 331 --------------WFRDLQIVSME-----------HVYGVWITELIRAGKLESALQFLN 365
Query: 835 KLK-KNRAVPSRRIYSLVIEGFCDTRRVEMAYNLLMEMQHHGHAPGDFILKYVFCILCEV 659
K R +P Y+++I R++ ++LL EM +P + C LC+
Sbjct: 366 SSKLDGRYIPDVFRYNMLIHRLLRENRLQEVFDLLTEMMDQHISPDKVTMDAAMCFLCKA 425
Query: 658 GHTELALNLINAHM-YGHPVDVKLYNRFIKIINGSGRPDIAIQVMERMMEENHTPNLKSY 482
G E+AL L N++ +G + YN I + G D A ++++ + E + P K++
Sbjct: 426 GMVEVALELYNSNFEFGISPNTMAYNYLINALCRDGSTDEAYRILKCSIYEGYFPGKKTF 485
Query: 481 VSLLYGFLISKSVVNAMNLFRELLVEKRIL--RSLYNVMVCGLCKIPNSDLALMYYQEML 308
S+L L + ++ M +E+ + S Y+ + LC+ + + + E+
Sbjct: 486 -SILASALCREGKLDKMKELVIFALERNCMPNDSTYDKFIYALCRARRVEDGYLIHCELN 544
Query: 307 GKRLQPSRACYVNLIRVLCVEGQFNLALELVGELKNKKYELRTYDYNVLLYYSFKISEVN 128
+ +R+ Y LI G+ ++A L+ E+ K + + ++ ++ +
Sbjct: 545 RINVVATRSTYFVLIEGFIKSGRGDIAARLLIEMLEKGHNPPRGLFRSVILCLIEMENME 604
Query: 127 HAWFFFTDMRNQKCPPNVSTFNILILGSSRARR 29
+F +++ PN +N I + RA++
Sbjct: 605 KQFFNLLELQLSCQEPNSEVYNNFIYAAGRAKK 637
>ref|XP_004172369.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g71210-like, partial [Cucumis sativus]
Length = 889
Score = 186 bits (471), Expect = 2e-44
Identities = 115/367 (31%), Positives = 183/367 (49%), Gaps = 1/367 (0%)
Frame = -3
Query: 1216 MNAAVQFFCTGKFLDVAMSFYHERKEIGIAVDAFTYKKLATALCGVGKLEEAYEVLNDGI 1037
M+AA+ F C ++VA+ Y+ E GI+ + Y L ALC G +EAY +L I
Sbjct: 391 MDAAMCFLCKAGMVEVALELYNSNFEFGISPNTMAYNYLINALCRDGSTDEAYRILKCSI 450
Query: 1036 SAGHRIIKPALFILARALLNVGKVDLSVNLFDIAAATDCPPNTPLANAIVRSLCEAGKVD 857
G+ K ILA AL GK+D L A +C PN + + +LC A +V+
Sbjct: 451 YEGYFPGKKXFSILASALCREGKLDKMKELVIFALERNCMPNDSTYDKFIYALCRARRVE 510
Query: 856 DAYGFLKKLKKNRAVPSRRIYSLVIEGFCDTRRVEMAYNLLMEMQHHGHAPGDFILKYVF 677
D Y +L + V +R Y ++IEGF + R ++A LL+EM GH P + + V
Sbjct: 511 DGYLIHCELNRINVVATRSTYFVLIEGFIKSGRGDIAARLLIEMLEKGHNPPRGLFRSVI 570
Query: 676 CILCEVGHTELA-LNLINAHMYGHPVDVKLYNRFIKIINGSGRPDIAIQVMERMMEENHT 500
L E+ + E NL+ + + ++YN FI + +P++A +V M+
Sbjct: 571 LCLIEMENMEKQFFNLLELQLSCQEPNSEVYNNFIYAAGRAKKPELANEVYHMMLRNGIQ 630
Query: 499 PNLKSYVSLLYGFLISKSVVNAMNLFRELLVEKRILRSLYNVMVCGLCKIPNSDLALMYY 320
PNL S + LL G+L S+ + +A+ L + I R + NV+V GLCK ++LA ++
Sbjct: 631 PNLSSDILLLRGYLYSERISDALIFLSNLSQTRTIGRKISNVVVVGLCKANKTNLAFDFW 690
Query: 319 QEMLGKRLQPSRACYVNLIRVLCVEGQFNLALELVGELKNKKYELRTYDYNVLLYYSFKI 140
+ + K PS CY L + C +++ + L+ +L L ++ NVLLY S K
Sbjct: 691 KHLRDKGTVPSIECYEELAKHFCQNERYDAVVNLLNDLDKVGRPLTSFLGNVLLYSSLKT 750
Query: 139 SEVNHAW 119
++ AW
Sbjct: 751 QKLYKAW 757
Score = 77.8 bits (190), Expect = 8e-12
Identities = 79/393 (20%), Positives = 155/393 (39%), Gaps = 4/393 (1%)
Frame = -3
Query: 1195 FCTGKFLDVAMSFYHERKEIGIAVDAFTYKKLATALCGVGKLEEAYEVLNDGISAGHRII 1016
FC LD A +F H+ + G ++ L A C G E A++++
Sbjct: 257 FCKQNQLDEAETFLHDLVDSGKKLNGRMLDLLVGAFCQSGNFERAWKLVE---------- 306
Query: 1015 KPALFILARALLNVGKVDLSVNLFDIAAATDCPPNTPLANAIVRSLCEAGKVDDAYGFLK 836
DL + + + + L AGK++ A FL
Sbjct: 307 --------------WFRDLQIVSME-----------HVYGVWITELIRAGKLESALQFLN 341
Query: 835 KLK-KNRAVPSRRIYSLVIEGFCDTRRVEMAYNLLMEMQHHGHAPGDFILKYVFCILCEV 659
K R +P Y+++I R++ ++LL EM +P + C LC+
Sbjct: 342 SSKLDGRYIPDVFRYNMLIHRLLRENRLQEVFDLLTEMMDQHISPDKVTMDAAMCFLCKA 401
Query: 658 GHTELALNLINAHM-YGHPVDVKLYNRFIKIINGSGRPDIAIQVMERMMEENHTPNLKSY 482
G E+AL L N++ +G + YN I + G D A ++++ + E + P K +
Sbjct: 402 GMVEVALELYNSNFEFGISPNTMAYNYLINALCRDGSTDEAYRILKCSIYEGYFPGKKXF 461
Query: 481 VSLLYGFLISKSVVNAMNLFRELLVEKRIL--RSLYNVMVCGLCKIPNSDLALMYYQEML 308
S+L L + ++ M +E+ + S Y+ + LC+ + + + E+
Sbjct: 462 -SILASALCREGKLDKMKELVIFALERNCMPNDSTYDKFIYALCRARRVEDGYLIHCELN 520
Query: 307 GKRLQPSRACYVNLIRVLCVEGQFNLALELVGELKNKKYELRTYDYNVLLYYSFKISEVN 128
+ +R+ Y LI G+ ++A L+ E+ K + + ++ ++ +
Sbjct: 521 RINVVATRSTYFVLIEGFIKSGRGDIAARLLIEMLEKGHNPPRGLFRSVILCLIEMENME 580
Query: 127 HAWFFFTDMRNQKCPPNVSTFNILILGSSRARR 29
+F +++ PN +N I + RA++
Sbjct: 581 KQFFNLLELQLSCQEPNSEVYNNFIYAAGRAKK 613
>ref|XP_006441414.1| hypothetical protein CICLE_v10024609mg [Citrus clementina]
gi|557543676|gb|ESR54654.1| hypothetical protein
CICLE_v10024609mg [Citrus clementina]
Length = 862
Score = 185 bits (469), Expect = 4e-44
Identities = 114/369 (30%), Positives = 183/369 (49%), Gaps = 3/369 (0%)
Frame = -3
Query: 1216 MNAAVQFFCTGKFLDVAMSFYHERKEIGIAVDAFTYKKLATALCGVGKLEEAYEVLNDGI 1037
MN + FFC +DVA+ Y R E G++ + Y L +LCG G +EAYEVL + I
Sbjct: 384 MNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTDEAYEVLKNSI 443
Query: 1036 SAGHRIIKPALFILARALLNVGKVDLSVNLFDIAAATDCPPNTPLANAIVRSLCEAGKVD 857
G K L ILA AL GK + +L A + + + +LC+A KV+
Sbjct: 444 DQGLFPGKKTLSILADALCRDGKFEQMKDLVIFALERNIKLRDVTYDKFISALCKANKVE 503
Query: 856 DAYGFLKKLKKNRAVPSRRIYSLVIEGFCDTRRVEMAYNLLMEMQHHGHAPGDFILKYVF 677
Y +L + V S Y +I GF + R ++A LL+EM+ +GH P + + V
Sbjct: 504 VGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEENGHKPTRALHRAVI 563
Query: 676 CILCEV-GHTELALNLINAHMYGHPVDVKLYNRFIKIINGSGRPDIAIQVMERMMEENHT 500
LC + + L L+N + + ++YN FI RPD+A V E M
Sbjct: 564 RCLCNMETPAKQFLQLLNMQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLV 623
Query: 499 PNLKSYVSLLYGFLISKSVVNAMNLFRELLVEKR--ILRSLYNVMVCGLCKIPNSDLALM 326
P L S + +L +L S + +A+N F L +++ I R LYN ++ GLCK ++LA
Sbjct: 624 PQLGSNILMLQSYLKSGRISDALNFFNHLRLKEMNGIPRKLYNTLIVGLCKAMKANLAWG 683
Query: 325 YYQEMLGKRLQPSRACYVNLIRVLCVEGQFNLALELVGELKNKKYELRTYDYNVLLYYSF 146
+ +EM + PS CY LI++LC +++ + ++ L+ ++ ++ N LL ++
Sbjct: 684 FMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLEGHGRQVTSFIGNTLLLHAL 743
Query: 145 KISEVNHAW 119
K ++ AW
Sbjct: 744 KTRDLYEAW 752
Score = 75.5 bits (184), Expect = 4e-11
Identities = 90/458 (19%), Positives = 167/458 (36%), Gaps = 78/458 (17%)
Frame = -3
Query: 1192 CTGKFLDVAMSFYHERKEIGIAVDAFTYKKLATALCGVGKLEEAYEVLNDGISAGHRI-I 1016
C K +D A+ ++ + V F + ALC + E+A ++L D + + +
Sbjct: 250 CKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQAGKLLEDFKDRDNVVKL 309
Query: 1015 KPALFILARALLNVGKVDLSV------------------------------------NLF 944
+ A + R L+ G++DL++ +LF
Sbjct: 310 EKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLVSRLLKENRLMEVFDLF 369
Query: 943 DIAAATDCPPNTPLANAIVRSLCEAGKVDDAYGFLKKLKKNRAVPSRRIYSLVIEGFCDT 764
P+ N ++ C+AG VD A K + P+ +Y+ +I C
Sbjct: 370 MDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGD 429
Query: 763 RRVEMAYNLLMEMQHHGHAPGDFILKYVFCILCEVGHTELALNLINAHMYGHPVDVKL-- 590
+ AY +L G PG L + LC G E +L+ ++ ++KL
Sbjct: 430 GSTDEAYEVLKNSIDQGLFPGKKTLSILADALCRDGKFEQMKDLV---IFALERNIKLRD 486
Query: 589 --YNRFIKIINGSGRPDIAIQVMERMMEENHTPNLKSYVSLLYGFLISKSVVNAMNLFRE 416
Y++FI + + + ++ + + N + +Y+ L++GF S A L E
Sbjct: 487 VTYDKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVE 546
Query: 415 L---------LVEKRILRSL---------------------------YNVMVCGLCKIPN 344
+ + + ++R L YN + G +
Sbjct: 547 MEENGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQLSHQETNFQIYNFFIDGAGHVKR 606
Query: 343 SDLALMYYQEMLGKRLQPSRACYVNLIRVLCVEGQFNLALELVGELKNKKYE-LRTYDYN 167
DLA Y+ M L P + +++ G+ + AL L+ K+ + YN
Sbjct: 607 PDLARAVYELMQRSGLVPQLGSNILMLQSYLKSGRISDALNFFNHLRLKEMNGIPRKLYN 666
Query: 166 VLLYYSFKISEVNHAWFFFTDMRNQKCPPNVSTFNILI 53
L+ K + N AW F +MR+ P++ + LI
Sbjct: 667 TLIVGLCKAMKANLAWGFMREMRHNGMYPSMECYEELI 704
>ref|XP_006301839.1| hypothetical protein CARUB_v10022308mg [Capsella rubella]
gi|482570549|gb|EOA34737.1| hypothetical protein
CARUB_v10022308mg [Capsella rubella]
Length = 868
Score = 184 bits (468), Expect = 5e-44
Identities = 123/395 (31%), Positives = 193/395 (48%), Gaps = 2/395 (0%)
Frame = -3
Query: 1216 MNAAVQFFCTGKFLDVAMSFYHERKEIGIAVDAFTYKKLATALCGVGKLEEAYEVLNDGI 1037
MNAA+ FFC F+D A+ Y R EIG A A +Y L +LC +E+AY+VL +
Sbjct: 384 MNAALCFFCKAGFVDEALDLYRSRSEIGFAPTATSYNYLIHSLCANESVEQAYDVLKGAM 443
Query: 1036 SAGHRIIKPALFILARALLNVGKVDLSVNLFDIAAATDCPPNTPLANAIVRSLCEAGKVD 857
GH + L AL GK D++ L A D P I+ +LC+AGKV+
Sbjct: 444 DRGHFLGAKTFSTLTNALCWKGKPDMAKELIIAATEQDLLPKRIAGCNIISALCDAGKVE 503
Query: 856 DAYGFLKKLKKNRAVPSRRIYSLVIEGFCDTRRVEMAYNLLMEMQHHGHAPGDFILKYVF 677
DA + K S +++ +I G R ++A L++ MQ G+ P + + V
Sbjct: 504 DALMINELFNKGGVDTSFKMFISLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLFRNVI 563
Query: 676 CILCEV--GHTELALNLINAHMYGHPVDVKLYNRFIKIINGSGRPDIAIQVMERMMEENH 503
+CE+ G L+ + V+ YN FI+ +G+P +A V + M +
Sbjct: 564 RCVCEMESGEKNFFTTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGI 623
Query: 502 TPNLKSYVSLLYGFLISKSVVNAMNLFRELLVEKRILRSLYNVMVCGLCKIPNSDLALMY 323
P L S + +L +L ++ + +A++ F +L + + + LYNVMV GL K D A+ +
Sbjct: 624 IPTLDSNILMLQSYLKNEKMADALHFFHDLREKGEVTKRLYNVMVVGLSKANRLDDAMHF 683
Query: 322 YQEMLGKRLQPSRACYVNLIRVLCVEGQFNLALELVGELKNKKYELRTYDYNVLLYYSFK 143
+EM G+ L+PS CY I+ LC E ++ A+ LV E + + + NVLL+ + K
Sbjct: 684 LEEMKGEGLRPSIECYEVNIQNLCNEEKYEEAVGLVNEFRKSGRRITAFIGNVLLHNAMK 743
Query: 142 ISEVNHAWFFFTDMRNQKCPPNVSTFNILILGSSR 38
V AW D+ +K P S ++ L S R
Sbjct: 744 SKGVYEAWTRMRDV-EEKIPEMKSLGELIGLFSGR 777
Score = 74.3 bits (181), Expect = 9e-11
Identities = 91/410 (22%), Positives = 166/410 (40%), Gaps = 43/410 (10%)
Frame = -3
Query: 1102 LATALCGVGKLEEAYEVLNDGISAGHRIIKPALFILARALLNVGKVDLSVN--------- 950
L ALC K +EA ++L+D G + A I RAL+ G ++ + +
Sbjct: 281 LVDALCSKRKFQEATKLLDDIKVVGTVNLDRAYDIWIRALIKAGFLNNTADFLQKISPLE 340
Query: 949 ------------LFDIAAATDC---------------PPNTPLANAIVRSLCEAGKVDDA 851
+F + D PN NA + C+AG VD+A
Sbjct: 341 GCELEVFRYNSLVFQLLKENDLNGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEA 400
Query: 850 YGFLKKLKKNRAVPSRRIYSLVIEGFCDTRRVEMAYNLLMEMQHHGHAPGDFILKYVFCI 671
+ + P+ Y+ +I C VE AY++L GH G +
Sbjct: 401 LDLYRSRSEIGFAPTATSYNYLIHSLCANESVEQAYDVLKGAMDRGHFLGAKTFSTLTNA 460
Query: 670 LCEVGHTELALNLINAHMYGHPVDVKLYN-RFIKIINGSGRPDIAIQVMERMMEENHTPN 494
LC G ++A LI A + ++ I + +G+ + A+ + E + +
Sbjct: 461 LCWKGKPDMAKELIIAATEQDLLPKRIAGCNIISALCDAGKVEDALMINELFNKGGVDTS 520
Query: 493 LKSYVSLLYGFL-ISKSVVNAMNLFRELLVEKRILRSLYNVMVCGLCKIPNSD----LAL 329
K ++SL+YG + + + + A + R RSL+ ++ +C++ + + L
Sbjct: 521 FKMFISLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLFRNVIRCVCEMESGEKNFFTTL 580
Query: 328 MYYQEMLGKRLQPSRACYVNLIRVLCVEGQFNLALELVGELKNKKYELRTYDYNVLLYYS 149
+ +Q L + Y I G+ LA LV ++ ++ + T D N+L+ S
Sbjct: 581 LKFQLSLWEH---KVQAYNLFIEGAGFAGKPKLA-RLVYDMMDRDGIIPTLDSNILMLQS 636
Query: 148 F-KISEVNHAWFFFTDMRNQKCPPNVSTFNILILGSSRARRFVKCLSMLE 2
+ K ++ A FF D+R +K +N++++G S+A R + LE
Sbjct: 637 YLKNEKMADALHFFHDLR-EKGEVTKRLYNVMVVGLSKANRLDDAMHFLE 685
>ref|XP_006493417.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71210-like
[Citrus sinensis]
Length = 862
Score = 183 bits (464), Expect = 1e-43
Identities = 114/369 (30%), Positives = 182/369 (49%), Gaps = 3/369 (0%)
Frame = -3
Query: 1216 MNAAVQFFCTGKFLDVAMSFYHERKEIGIAVDAFTYKKLATALCGVGKLEEAYEVLNDGI 1037
MN + FFC +DVA+ Y R E G++ + Y L +LCG G EAYEVL + I
Sbjct: 384 MNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGDGSTHEAYEVLKNSI 443
Query: 1036 SAGHRIIKPALFILARALLNVGKVDLSVNLFDIAAATDCPPNTPLANAIVRSLCEAGKVD 857
G K L ILA AL GK + +L A + + + +LC+A KV+
Sbjct: 444 DHGLFPGKKTLSILADALCRDGKFEQMKDLVIFALERNIMLRDVTYDKFISALCKANKVE 503
Query: 856 DAYGFLKKLKKNRAVPSRRIYSLVIEGFCDTRRVEMAYNLLMEMQHHGHAPGDFILKYVF 677
Y +L + V S Y +I GF + R ++A LL+EM+ GH P + + V
Sbjct: 504 VGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEEKGHKPTRALHRAVI 563
Query: 676 CILCEV-GHTELALNLINAHMYGHPVDVKLYNRFIKIINGSGRPDIAIQVMERMMEENHT 500
LC + + L L+N + + ++YN FI RPD+A V E M
Sbjct: 564 RCLCNMETPAKQFLQLLNMQLSHQETNFQIYNFFIDGAGHVKRPDLARAVYELMQRSGLV 623
Query: 499 PNLKSYVSLLYGFLISKSVVNAMNLFRELLVEKR--ILRSLYNVMVCGLCKIPNSDLALM 326
P L S + +L +L S + +A+N F L ++++ I R LYN ++ GLCK ++LA
Sbjct: 624 PQLGSNILMLQSYLKSGRISDALNFFNHLRLKEKNGIPRKLYNTLIGGLCKAMKANLAWG 683
Query: 325 YYQEMLGKRLQPSRACYVNLIRVLCVEGQFNLALELVGELKNKKYELRTYDYNVLLYYSF 146
+ +EM + PS CY LI++LC +++ + ++ L+ ++ ++ N LL ++
Sbjct: 684 FMREMRHNGMYPSMECYEELIKLLCSTKNYDMVVGVMNHLEGHGRQVTSFIGNTLLLHAL 743
Query: 145 KISEVNHAW 119
K ++ AW
Sbjct: 744 KTRDLYEAW 752
Score = 74.3 bits (181), Expect = 9e-11
Identities = 94/455 (20%), Positives = 164/455 (36%), Gaps = 75/455 (16%)
Frame = -3
Query: 1192 CTGKFLDVAMSFYHERKEIGIAVDAFTYKKLATALCGVGKLEEAYEVLNDGISAGHRI-I 1016
C K +D A+ ++ + V F + ALC + E+A ++L D + +
Sbjct: 250 CKQKKIDEAVEYFQQLVSGRECVSGFMIGIVVDALCKNSRFEQAGKLLEDFKDRDDVVKL 309
Query: 1015 KPALFILARALLNVGKVDLSV------------------------------------NLF 944
+ A + R L+ G++DL++ +LF
Sbjct: 310 EKAYDVWLRNLVRAGRLDLALEFLKSKNSLEGYVPEVFRFNFLVSRLLKENRLMEVFDLF 369
Query: 943 DIAAATDCPPNTPLANAIVRSLCEAGKVDDAYGFLKKLKKNRAVPSRRIYSLVIEGFCDT 764
P+ N ++ C+AG VD A K + P+ +Y+ +I C
Sbjct: 370 MDMKEGQISPDGVTMNTVLCFFCKAGMVDVAIELYKSRSEFGLSPNGIVYNYLINSLCGD 429
Query: 763 RRVEMAYNLLMEMQHHGHAPGDFILKYVFCILCEVGHTELALNLI--------------- 629
AY +L HG PG L + LC G E +L+
Sbjct: 430 GSTHEAYEVLKNSIDHGLFPGKKTLSILADALCRDGKFEQMKDLVIFALERNIMLRDVTY 489
Query: 628 ----------NAHMYGHPVDVKL--------YNRFIKIING---SGRPDIAIQVMERMME 512
N G+ + +L N +I++I+G S R DIA +++ M E
Sbjct: 490 DKFISALCKANKVEVGYLIHSELSRMNKVASENTYIQLIHGFNKSNRADIAARLLVEMEE 549
Query: 511 ENHTPNLKSYVSLLYGFL-ISKSVVNAMNLFRELLVEKRILRSLYNVMVCGLCKIPNSDL 335
+ H P + +++ + + L L + +YN + G + DL
Sbjct: 550 KGHKPTRALHRAVIRCLCNMETPAKQFLQLLNMQLSHQETNFQIYNFFIDGAGHVKRPDL 609
Query: 334 ALMYYQEMLGKRLQPSRACYVNLIRVLCVEGQFNLALELVGELKNK-KYELRTYDYNVLL 158
A Y+ M L P + +++ G+ + AL L+ K K + YN L+
Sbjct: 610 ARAVYELMQRSGLVPQLGSNILMLQSYLKSGRISDALNFFNHLRLKEKNGIPRKLYNTLI 669
Query: 157 YYSFKISEVNHAWFFFTDMRNQKCPPNVSTFNILI 53
K + N AW F +MR+ P++ + LI
Sbjct: 670 GGLCKAMKANLAWGFMREMRHNGMYPSMECYEELI 704