BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00022607
         (1025 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138518.1| PREDICTED: tRNA pseudouridine synthase A 1-l...   362   1e-97
ref|XP_006419217.1| hypothetical protein CICLE_v10005313mg [Citr...   360   5e-97
ref|XP_004508081.1| PREDICTED: tRNA pseudouridine synthase A 1-l...   359   8e-97
ref|XP_006488724.1| PREDICTED: tRNA pseudouridine synthase-like ...   358   1e-96
gb|ESW26471.1| hypothetical protein PHAVU_003G122200g [Phaseolus...   358   2e-96
ref|XP_006601404.1| PREDICTED: tRNA pseudouridine synthase-like ...   357   3e-96
emb|CBI26017.3| unnamed protein product [Vitis vinifera]              354   3e-95
ref|XP_002275097.1| PREDICTED: tRNA pseudouridine synthase A 1-l...   354   3e-95
ref|XP_003541334.1| PREDICTED: tRNA pseudouridine synthase-like ...   354   4e-95
ref|XP_002312761.2| hypothetical protein POPTR_0008s21110g [Popu...   353   8e-95
ref|XP_004297071.1| PREDICTED: tRNA pseudouridine synthase A 1-l...   348   1e-93
ref|XP_002882501.1| tRNA pseudouridine synthase family protein [...   348   1e-93
ref|XP_006419216.1| hypothetical protein CICLE_v10005313mg [Citr...   348   3e-93
ref|XP_003609879.1| tRNA pseudouridine synthase family protein [...   347   3e-93
ref|XP_003609878.1| tRNA pseudouridine synthase family protein [...   347   3e-93
gb|EOY06929.1| Pseudouridine synthase family protein isoform 1 [...   347   4e-93
ref|XP_006488723.1| PREDICTED: tRNA pseudouridine synthase-like ...   346   7e-93
gb|EMJ23827.1| hypothetical protein PRUPE_ppa008515mg [Prunus pe...   345   1e-92
ref|NP_187351.2| pseudouridine synthase family protein [Arabidop...   345   2e-92
dbj|BAF00823.1| putative tRNA pseudouridine synthase [Arabidopsi...   345   2e-92

>ref|XP_004138518.1| PREDICTED: tRNA pseudouridine synthase A 1-like [Cucumis sativus]
            gi|449518841|ref|XP_004166444.1| PREDICTED: tRNA
            pseudouridine synthase A 1-like [Cucumis sativus]
          Length = 335

 Score =  362 bits (930), Expect = 1e-97
 Identities = 172/281 (61%), Positives = 219/281 (77%), Gaps = 1/281 (0%)
 Frame = +3

Query: 162  WKWKLVIAYEGTRYAGWQYQEKPKSVQCLVEEALRKTTKLGREDLALVGASRTDAGVHAW 341
            +KW+L+IAY+GTRYAGWQYQ  P ++QCL+EEAL   TKL R+DL LVGASRTD GVHAW
Sbjct: 54   FKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHLVGASRTDKGVHAW 113

Query: 342  GQVAHFMTPFLLEDLEKVHASLNGILPLDIRVREITTVPPIFHARFSALKKTYAYKIYNS 521
            GQVAHF+TPF  + LE VHA+LNG+LP+DIRVRE++   P FHARFS L K Y YKIY+ 
Sbjct: 114  GQVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAVPDFHARFSTLSKVYHYKIYSG 173

Query: 522  TIMDPFQRLYAQHCAYKLNADAMSEAAKFFVGQHDFSAF-RTSNNFLPKHPIREIFRFDL 698
            TIMDPFQR Y  HC YKLN  AM EAA +FVG+HDFSAF   ++N    +P++ IFRFD+
Sbjct: 174  TIMDPFQRCYTYHCVYKLNYAAMKEAANYFVGKHDFSAFTNAAHNDRVVNPVKVIFRFDV 233

Query: 699  VKMGSLLQLEIEGTGFFYRQIRNMVGLLIEIGKEALPVDIVCDVLKSCDRRKLAKLSRVA 878
            ++MG+L+QLE+EG+GF YRQ+RNMVGLL++IGKEALP ++V  +L S DRR+LAK +   
Sbjct: 234  IEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILASRDRRELAKYASGV 293

Query: 879  LPQGLCLMNVDYCSAHLESPIGSPLPSFGRHKQIQKCILPY 1001
             PQGLCL++++Y   HL+ P   P  SFGR + + KC +P+
Sbjct: 294  PPQGLCLVSINYKEDHLKLPSDCPGTSFGRTRSVSKCKVPF 334


>ref|XP_006419217.1| hypothetical protein CICLE_v10005313mg [Citrus clementina]
            gi|557521090|gb|ESR32457.1| hypothetical protein
            CICLE_v10005313mg [Citrus clementina]
          Length = 330

 Score =  360 bits (924), Expect = 5e-97
 Identities = 172/281 (61%), Positives = 213/281 (75%), Gaps = 1/281 (0%)
 Frame = +3

Query: 162  WKWKLVIAYEGTRYAGWQYQEKPKSVQCLVEEALRKTTKLGREDLALVGASRTDAGVHAW 341
            +KW+LVIAY+GTRYAGWQ+Q  P ++QC+VE+AL + TKL REDL LVGASRTD GVHAW
Sbjct: 49   FKWRLVIAYDGTRYAGWQFQTSPPTIQCIVEKALIRVTKLEREDLRLVGASRTDTGVHAW 108

Query: 342  GQVAHFMTPFLLEDLEKVHASLNGILPLDIRVREITTVPPIFHARFSALKKTYAYKIYNS 521
            GQVAHF+TPF  + LE +HA+LNG+LP DIRVREI+   P FHARFSA  K Y YKIYN 
Sbjct: 109  GQVAHFITPFSYDGLESIHAALNGLLPPDIRVREISAAVPEFHARFSAKSKIYHYKIYND 168

Query: 522  TIMDPFQRLYAQHCAYKLNADAMSEAAKFFVGQHDFSAF-RTSNNFLPKHPIREIFRFDL 698
             +MDPFQ  YA H  YKLN   M EAA++FVG+HDFSAF     N    +P++ IFRFD+
Sbjct: 169  AVMDPFQHHYAYHSVYKLNTTLMREAAEYFVGKHDFSAFVNIQRNDRALNPVKSIFRFDV 228

Query: 699  VKMGSLLQLEIEGTGFFYRQIRNMVGLLIEIGKEALPVDIVCDVLKSCDRRKLAKLSRVA 878
            ++MG+LLQLE+EG+GF YRQ+RNMV LL++IGKEA+P DIV  +L + DR++LAK +  A
Sbjct: 229  IEMGALLQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDIVPKILATQDRKELAKYALSA 288

Query: 879  LPQGLCLMNVDYCSAHLESPIGSPLPSFGRHKQIQKCILPY 1001
             P GLCL+ V Y   HL  P   PL SFGRH  ++KC LP+
Sbjct: 289  PPHGLCLVEVKYNEEHLRLPAACPLSSFGRHHSVRKCKLPF 329


>ref|XP_004508081.1| PREDICTED: tRNA pseudouridine synthase A 1-like [Cicer arietinum]
          Length = 324

 Score =  359 bits (922), Expect = 8e-97
 Identities = 174/277 (62%), Positives = 217/277 (78%), Gaps = 1/277 (0%)
 Frame = +3

Query: 162 WKWKLVIAYEGTRYAGWQYQEKPKSVQCLVEEALRKTTKLGREDLALVGASRTDAGVHAW 341
           +KW+L++AY+GTRYAGWQYQE P +VQC VE+AL K TKL R+DL LVGASRTDAGVHAW
Sbjct: 43  YKWRLLLAYDGTRYAGWQYQESPPTVQCAVEKALIKATKLQRKDLQLVGASRTDAGVHAW 102

Query: 342 GQVAHFMTPFLLEDLEKVHASLNGILPLDIRVREITTVPPIFHARFSALKKTYAYKIYNS 521
           GQVAHF+TPF   +L+++HA+LNG+LP DIRVREI+     FHARFSA  K Y YKIY+ 
Sbjct: 103 GQVAHFITPFNYNNLDRIHAALNGLLPKDIRVREISPASSEFHARFSAKSKIYHYKIYSD 162

Query: 522 TIMDPFQRLYAQHCAYKLNADAMSEAAKFFVGQHDFSAF-RTSNNFLPKHPIREIFRFDL 698
           TIMDPFQR +A H  YKLN+DAM EAAK+F+G+HDFSAF   S+N     P++ IFRFD+
Sbjct: 163 TIMDPFQRHFAYHNMYKLNSDAMREAAKYFIGKHDFSAFENASHNDRVPDPVKHIFRFDV 222

Query: 699 VKMGSLLQLEIEGTGFFYRQIRNMVGLLIEIGKEALPVDIVCDVLKSCDRRKLAKLSRVA 878
            +MG+LLQLE+EG+GF YRQ+RNMV LL++IGKEA+P DIV  +L S DR++LAK S   
Sbjct: 223 KEMGALLQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDIVPHILSSRDRKELAKYSFYL 282

Query: 879 LPQGLCLMNVDYCSAHLESPIGSPLPSFGRHKQIQKC 989
            P GLCL++++Y  +HL  P G P  SFG H  I+KC
Sbjct: 283 PPHGLCLVSINYNESHLLPPPGCPAKSFGMHHTIRKC 319


>ref|XP_006488724.1| PREDICTED: tRNA pseudouridine synthase-like 1-like isoform X2 [Citrus
            sinensis]
          Length = 330

 Score =  358 bits (920), Expect = 1e-96
 Identities = 171/281 (60%), Positives = 212/281 (75%), Gaps = 1/281 (0%)
 Frame = +3

Query: 162  WKWKLVIAYEGTRYAGWQYQEKPKSVQCLVEEALRKTTKLGREDLALVGASRTDAGVHAW 341
            +KW+LVI Y+GTRYAGWQ+Q  P ++QC+VE+AL + TKL REDL LVGASRTD GVHAW
Sbjct: 49   FKWRLVIGYDGTRYAGWQFQTSPPTIQCIVEKALIRVTKLEREDLRLVGASRTDTGVHAW 108

Query: 342  GQVAHFMTPFLLEDLEKVHASLNGILPLDIRVREITTVPPIFHARFSALKKTYAYKIYNS 521
            GQVAHF+TPF  + LE +HA+LNG+LP DIRVREI+   P FHARFSA  K Y YKIYN 
Sbjct: 109  GQVAHFITPFSYDGLESIHAALNGLLPPDIRVREISAAVPEFHARFSAKSKIYHYKIYND 168

Query: 522  TIMDPFQRLYAQHCAYKLNADAMSEAAKFFVGQHDFSAF-RTSNNFLPKHPIREIFRFDL 698
             +MDPFQ  YA H  YKLN   M EAA++FVG+HDFSAF     N    +P++ IFRFD+
Sbjct: 169  AVMDPFQHHYAYHSVYKLNTTLMREAAEYFVGKHDFSAFVNIQRNDRALNPVKSIFRFDV 228

Query: 699  VKMGSLLQLEIEGTGFFYRQIRNMVGLLIEIGKEALPVDIVCDVLKSCDRRKLAKLSRVA 878
            ++MG+LLQLE+EG+GF YRQ+RNMV LL++IGKEA+P DIV  +L + DR++LAK +  A
Sbjct: 229  IEMGALLQLEVEGSGFLYRQVRNMVALLLQIGKEAIPPDIVPKILATQDRKELAKYALSA 288

Query: 879  LPQGLCLMNVDYCSAHLESPIGSPLPSFGRHKQIQKCILPY 1001
             P GLCL+ V Y   HL  P   PL SFGRH  ++KC LP+
Sbjct: 289  PPHGLCLVEVKYNEEHLRLPAACPLSSFGRHHSVRKCKLPF 329


>gb|ESW26471.1| hypothetical protein PHAVU_003G122200g [Phaseolus vulgaris]
          Length = 322

 Score =  358 bits (919), Expect = 2e-96
 Identities = 172/281 (61%), Positives = 219/281 (77%), Gaps = 1/281 (0%)
 Frame = +3

Query: 162  WKWKLVIAYEGTRYAGWQYQEKPKSVQCLVEEALRKTTKLGREDLALVGASRTDAGVHAW 341
            +KW+LV+AYEGTRY+GWQYQ+ P +VQC +E+AL + TKL R+DL+LVGASRTDAGVHAW
Sbjct: 40   YKWRLVLAYEGTRYSGWQYQQSPPTVQCALEKALTQATKLQRKDLSLVGASRTDAGVHAW 99

Query: 342  GQVAHFMTPFLLEDLEKVHASLNGILPLDIRVREITTVPPIFHARFSALKKTYAYKIYNS 521
            GQVAHF TPF  ++LE +HA+LNG+LP DIRVREI+     FHARFS   K Y YKIYN 
Sbjct: 100  GQVAHFFTPFNYDNLEDIHAALNGLLPSDIRVREISPASAEFHARFSVKSKIYHYKIYND 159

Query: 522  TIMDPFQRLYAQHCAYKLNADAMSEAAKFFVGQHDFSAF-RTSNNFLPKHPIREIFRFDL 698
            +IMDPFQR +A H  YKLN+  M EA K+FVG+HDFSAF  +S+N     P++ IFRFDL
Sbjct: 160  SIMDPFQRHFAYHSIYKLNSAVMKEATKYFVGKHDFSAFANSSHNDRVPDPVKHIFRFDL 219

Query: 699  VKMGSLLQLEIEGTGFFYRQIRNMVGLLIEIGKEALPVDIVCDVLKSCDRRKLAKLSRVA 878
             +MG+LLQLE+EGTGF YRQ+RNMV LL++IG+EA+P +IV  +L+S DR +LAK S  A
Sbjct: 220  KEMGALLQLEVEGTGFLYRQVRNMVALLLQIGREAIPPNIVAHILESRDREELAKYSLSA 279

Query: 879  LPQGLCLMNVDYCSAHLESPIGSPLPSFGRHKQIQKCILPY 1001
             P GLCL++++Y  +HL  P G P  SFGR+  I+KC +P+
Sbjct: 280  PPHGLCLVSINYNESHLLPPPGCPANSFGRYHTIRKCKVPF 320


>ref|XP_006601404.1| PREDICTED: tRNA pseudouridine synthase-like 1-like [Glycine max]
          Length = 374

 Score =  357 bits (917), Expect = 3e-96
 Identities = 174/285 (61%), Positives = 220/285 (77%), Gaps = 3/285 (1%)
 Frame = +3

Query: 156  QQW-KWKLVIAYEGTRYAGWQYQEKPKSVQCLVEEALRKTTKLGREDLALVGASRTDAGV 332
            Q W KW+LV+AY+GT+YAGWQYQ+ P +VQC +E+AL + TKL R+D  LVGASRTDAGV
Sbjct: 88   QDWYKWRLVLAYDGTKYAGWQYQQSPPTVQCTLEKALTRATKLQRKDFCLVGASRTDAGV 147

Query: 333  HAWGQVAHFMTPFLLEDLEKVHASLNGILPLDIRVREITTVPPIFHARFSALKKTYAYKI 512
            HAWGQVAHF TPF  ++LE++HA+LNG+LP DIRVREI+     FHARFSA+ K Y YKI
Sbjct: 148  HAWGQVAHFFTPFNYDNLEELHAALNGLLPTDIRVREISPASAEFHARFSAISKIYHYKI 207

Query: 513  YNSTIMDPFQRLYAQHCAYKLNADAMSEAAKFFVGQHDFSAF-RTSNNFLPKHPIREIFR 689
            YN  IMDPFQR +A H  YKLN+  M EAAK+FVG+HDFSAF   SNN     P++ +FR
Sbjct: 208  YNDAIMDPFQRHFAYHSVYKLNSAVMREAAKYFVGKHDFSAFANASNNDGVPDPVKHVFR 267

Query: 690  FDLVKMGSLLQLEIEGTGFFYRQIRNMVGLLIEIGKEALPVDIVCDVLKSCDRRKLAKLS 869
            FDL +MG+LLQ+E+EG+GF YRQ+RNMV LL++IG+EA+P DIV  +L S DR++LAK S
Sbjct: 268  FDLKEMGALLQIEVEGSGFLYRQVRNMVALLLQIGREAIPPDIVPHILASRDRKELAKYS 327

Query: 870  RVALPQGLCLMNVDYCSAHLESPIG-SPLPSFGRHKQIQKCILPY 1001
              A P GLCL++++Y  +HL  P G  P  SFGRH  I+KC +P+
Sbjct: 328  LSAPPHGLCLVSINYNESHLLPPPGCPPANSFGRHHTIRKCKVPF 372


>emb|CBI26017.3| unnamed protein product [Vitis vinifera]
          Length = 326

 Score =  354 bits (909), Expect = 3e-95
 Identities = 171/281 (60%), Positives = 213/281 (75%), Gaps = 1/281 (0%)
 Frame = +3

Query: 162  WKWKLVIAYEGTRYAGWQYQEKPKSVQCLVEEALRKTTKLGREDLALVGASRTDAGVHAW 341
            +KW+LVIAYEGTRY+GWQYQ+ P ++QC+VE+AL + TKL REDL LVGASRTD GVHAW
Sbjct: 45   YKWRLVIAYEGTRYSGWQYQQSPPTIQCIVEKALTRATKLEREDLYLVGASRTDTGVHAW 104

Query: 342  GQVAHFMTPFLLEDLEKVHASLNGILPLDIRVREITTVPPIFHARFSALKKTYAYKIYNS 521
            GQVAHF+TPF  + LE +HA+LNG+LP DIRVREI+   P FHARFS   K Y YKIYN 
Sbjct: 105  GQVAHFLTPFNYDGLESIHAALNGLLPPDIRVREISPAVPEFHARFSVKSKIYHYKIYND 164

Query: 522  TIMDPFQRLYAQHCAYKLNADAMSEAAKFFVGQHDFSAF-RTSNNFLPKHPIREIFRFDL 698
             +MDPF R Y  H  YKLN  AM EAAK F G+HDFSAF   S+N    +P++ IFRFD+
Sbjct: 165  AVMDPFLRHYVYHSVYKLNTLAMREAAKHFTGKHDFSAFVNASHNDRSPNPVKNIFRFDV 224

Query: 699  VKMGSLLQLEIEGTGFFYRQIRNMVGLLIEIGKEALPVDIVCDVLKSCDRRKLAKLSRVA 878
             +MG+LLQLE+EG+GF YRQ+RNMV LL++IG+EA+P +IV  +L + DR++LAK +  A
Sbjct: 225  NEMGALLQLEVEGSGFLYRQVRNMVALLLQIGREAIPPNIVPWILATRDRKELAKYALSA 284

Query: 879  LPQGLCLMNVDYCSAHLESPIGSPLPSFGRHKQIQKCILPY 1001
             P GLCLM+V Y   HL+ P G P  S GRH  ++KC LP+
Sbjct: 285  PPHGLCLMSVKYNEEHLQLPSGCPATSHGRHHTVRKCKLPF 325


>ref|XP_002275097.1| PREDICTED: tRNA pseudouridine synthase A 1-like [Vitis vinifera]
          Length = 336

 Score =  354 bits (909), Expect = 3e-95
 Identities = 171/281 (60%), Positives = 213/281 (75%), Gaps = 1/281 (0%)
 Frame = +3

Query: 162  WKWKLVIAYEGTRYAGWQYQEKPKSVQCLVEEALRKTTKLGREDLALVGASRTDAGVHAW 341
            +KW+LVIAYEGTRY+GWQYQ+ P ++QC+VE+AL + TKL REDL LVGASRTD GVHAW
Sbjct: 55   YKWRLVIAYEGTRYSGWQYQQSPPTIQCIVEKALTRATKLEREDLYLVGASRTDTGVHAW 114

Query: 342  GQVAHFMTPFLLEDLEKVHASLNGILPLDIRVREITTVPPIFHARFSALKKTYAYKIYNS 521
            GQVAHF+TPF  + LE +HA+LNG+LP DIRVREI+   P FHARFS   K Y YKIYN 
Sbjct: 115  GQVAHFLTPFNYDGLESIHAALNGLLPPDIRVREISPAVPEFHARFSVKSKIYHYKIYND 174

Query: 522  TIMDPFQRLYAQHCAYKLNADAMSEAAKFFVGQHDFSAF-RTSNNFLPKHPIREIFRFDL 698
             +MDPF R Y  H  YKLN  AM EAAK F G+HDFSAF   S+N    +P++ IFRFD+
Sbjct: 175  AVMDPFLRHYVYHSVYKLNTLAMREAAKHFTGKHDFSAFVNASHNDRSPNPVKNIFRFDV 234

Query: 699  VKMGSLLQLEIEGTGFFYRQIRNMVGLLIEIGKEALPVDIVCDVLKSCDRRKLAKLSRVA 878
             +MG+LLQLE+EG+GF YRQ+RNMV LL++IG+EA+P +IV  +L + DR++LAK +  A
Sbjct: 235  NEMGALLQLEVEGSGFLYRQVRNMVALLLQIGREAIPPNIVPWILATRDRKELAKYALSA 294

Query: 879  LPQGLCLMNVDYCSAHLESPIGSPLPSFGRHKQIQKCILPY 1001
             P GLCLM+V Y   HL+ P G P  S GRH  ++KC LP+
Sbjct: 295  PPHGLCLMSVKYNEEHLQLPSGCPATSHGRHHTVRKCKLPF 335


>ref|XP_003541334.1| PREDICTED: tRNA pseudouridine synthase-like 1-like [Glycine max]
          Length = 327

 Score =  354 bits (908), Expect = 4e-95
 Identities = 172/282 (60%), Positives = 219/282 (77%), Gaps = 2/282 (0%)
 Frame = +3

Query: 162  WKWKLVIAYEGTRYAGWQYQEKPKSVQCLVEEALRKTTKLGREDLALVGASRTDAGVHAW 341
            +KW++V+AY+GT+YAGWQYQE P +VQC VE+AL + TKL R+DL LVGASRTDAGVHAW
Sbjct: 44   YKWRIVLAYDGTQYAGWQYQESPPTVQCTVEKALTQATKLQRKDLCLVGASRTDAGVHAW 103

Query: 342  GQVAHFMTPFLLEDLEKVHASLNGILPLDIRVREITTVPPIFHARFSALKKTYAYKIYNS 521
            GQVAHF TPF  ++LE++HA+LNG+LP DIR+REI+     FHARFSA  K Y YKIYN 
Sbjct: 104  GQVAHFFTPFNYDNLEQLHAALNGLLPTDIRIREISPASAEFHARFSAKSKIYHYKIYND 163

Query: 522  TIMDPFQRLYAQHCAYKLNADAMSEAAKFFVGQHDFSAF-RTSNNFLPKHPIREIFRFDL 698
             IMDPFQR +A H  YKLN+  M EAA +FVG+HDFSAF   S+N     P++ +FRFDL
Sbjct: 164  AIMDPFQRHFAYHSVYKLNSAVMREAATYFVGKHDFSAFANASHNDRVPDPVKHVFRFDL 223

Query: 699  VKMGSLLQLEIEGTGFFYRQIRNMVGLLIEIGKEALPVDIVCDVLKSCDRRKLAKLSRVA 878
             +MG+LLQLE+EG+GF YRQ+RNMV LL++IG+EA+P DIV  +L S DR++LAK S  A
Sbjct: 224  KEMGALLQLEVEGSGFLYRQVRNMVALLLQIGREAIPPDIVPHILASRDRKELAKYSLPA 283

Query: 879  LPQGLCLMNVDYCSAHLESPIGS-PLPSFGRHKQIQKCILPY 1001
             P GLCL++++Y  +HL  P  S P  SFGRH+ I+KC +P+
Sbjct: 284  PPHGLCLVSINYNESHLLPPPESPPANSFGRHQTIRKCKVPF 325


>ref|XP_002312761.2| hypothetical protein POPTR_0008s21110g [Populus trichocarpa]
            gi|550333587|gb|EEE90128.2| hypothetical protein
            POPTR_0008s21110g [Populus trichocarpa]
          Length = 338

 Score =  353 bits (905), Expect = 8e-95
 Identities = 175/322 (54%), Positives = 228/322 (70%), Gaps = 11/322 (3%)
 Frame = +3

Query: 69   IPTPKLTTKWHARPXXXXXXXDIAN--SEHPQQ--------WKWKLVIAYEGTRYAGWQY 218
            +P   LTT   +         D+ +  +EHP          +KW+L+I+Y+GT Y GWQ+
Sbjct: 16   LPPTTLTTLPSSSSNTSVRVRDVGSGGAEHPNTVLKPTVDGFKWRLLISYDGTHYKGWQF 75

Query: 219  QEKPKSVQCLVEEALRKTTKLGREDLALVGASRTDAGVHAWGQVAHFMTPFLLEDLEKVH 398
            Q+ P ++QC++E+AL + TKL R+DL LVGASRTD GVHAWGQVAHF+TPF  + L+ +H
Sbjct: 76   QQTPPTIQCILEKALTRATKLERKDLHLVGASRTDGGVHAWGQVAHFVTPFNYDSLDSIH 135

Query: 399  ASLNGILPLDIRVREITTVPPIFHARFSALKKTYAYKIYNSTIMDPFQRLYAQHCAYKLN 578
            A+LNG+LP DIRVREI+ V P FHARFSA  KTY YKI+N T+MDPFQRLYA H  +KLN
Sbjct: 136  AALNGLLPPDIRVREISAVVPEFHARFSAKGKTYHYKIFNDTVMDPFQRLYAYHVTHKLN 195

Query: 579  ADAMSEAAKFFVGQHDFSAF-RTSNNFLPKHPIREIFRFDLVKMGSLLQLEIEGTGFFYR 755
            A  M EAA  F+G  DFSAF  +S N    +P++ IFRFD++KMG+LLQLE+EG+GF YR
Sbjct: 196  AAVMREAANHFIGTRDFSAFVNSSRNDGVPNPVKTIFRFDIIKMGALLQLEVEGSGFMYR 255

Query: 756  QIRNMVGLLIEIGKEALPVDIVCDVLKSCDRRKLAKLSRVALPQGLCLMNVDYCSAHLES 935
            Q+RNMV LL++IGKEA+  DIV  +L + DR++LAK +  A P GLCL+ V Y   HL+ 
Sbjct: 256  QVRNMVALLLQIGKEAISPDIVPKILATRDRKELAKYTLAAPPHGLCLVAVKYNEEHLQL 315

Query: 936  PIGSPLPSFGRHKQIQKCILPY 1001
            P+G P  S GRH  I KC +P+
Sbjct: 316  PLGCPTTSLGRHHSISKCKVPF 337


>ref|XP_004297071.1| PREDICTED: tRNA pseudouridine synthase A 1-like [Fragaria vesca
            subsp. vesca]
          Length = 326

 Score =  348 bits (894), Expect = 1e-93
 Identities = 172/281 (61%), Positives = 211/281 (75%), Gaps = 1/281 (0%)
 Frame = +3

Query: 162  WKWKLVIAYEGTRYAGWQYQEKPKSVQCLVEEALRKTTKLGREDLALVGASRTDAGVHAW 341
            +KW+LVIAY+GTRYAGWQYQ  P ++Q  VE+AL   T+L R DL LVGASRTD GVHAW
Sbjct: 45   FKWRLVIAYDGTRYAGWQYQSSPPTIQRYVEKALMVATQLERNDLHLVGASRTDKGVHAW 104

Query: 342  GQVAHFMTPFLLEDLEKVHASLNGILPLDIRVREITTVPPIFHARFSALKKTYAYKIYNS 521
            GQVAHF+TPF  + +E++HA+LNG LP DIRVREI+   P FHARFSA +K Y Y+IYN 
Sbjct: 105  GQVAHFITPFNYDRIERIHAALNGTLPEDIRVREISPAVPEFHARFSAQRKVYHYRIYND 164

Query: 522  TIMDPFQRLYAQHCAYKLNADAMSEAAKFFVGQHDFSAF-RTSNNFLPKHPIREIFRFDL 698
            T MDPFQR  A H A+KLN   M EAAK+F+G HDFSAF   S     + P+++IFR DL
Sbjct: 165  TFMDPFQRHNAYHSAHKLNPAVMREAAKYFIGNHDFSAFVNASQKERVRDPVKDIFRCDL 224

Query: 699  VKMGSLLQLEIEGTGFFYRQIRNMVGLLIEIGKEALPVDIVCDVLKSCDRRKLAKLSRVA 878
            V+ G+LLQLE+EG+GF YRQ+RNMV LL++IG+EA+P DIV  +L + DRR+LAK + +A
Sbjct: 225  VQKGALLQLEVEGSGFLYRQVRNMVALLLQIGREAVPPDIVPKILATRDRRELAKYTLLA 284

Query: 879  LPQGLCLMNVDYCSAHLESPIGSPLPSFGRHKQIQKCILPY 1001
             PQGLCLM V Y   HL+ P GSP  SFGRH  I  C LP+
Sbjct: 285  PPQGLCLMTVKYNEDHLQLPTGSPNTSFGRHYTINSCKLPF 325


>ref|XP_002882501.1| tRNA pseudouridine synthase family protein [Arabidopsis lyrata subsp.
            lyrata] gi|297328341|gb|EFH58760.1| tRNA pseudouridine
            synthase family protein [Arabidopsis lyrata subsp.
            lyrata]
          Length = 323

 Score =  348 bits (894), Expect = 1e-93
 Identities = 173/283 (61%), Positives = 217/283 (76%), Gaps = 3/283 (1%)
 Frame = +3

Query: 162  WKWKLVIAYEGTRYAGWQYQEKPKSVQCLVEEALRKTTKLGREDLALVGASRTDAGVHAW 341
            +KW+LVIAY+GTR+AGWQYQE P ++Q ++E+AL + T+LGR++L L+GA RTDAGVHAW
Sbjct: 41   YKWRLVIAYDGTRFAGWQYQESPPTIQSMLEKALIQITELGRKELHLIGAGRTDAGVHAW 100

Query: 342  GQVAHFMTPFLLEDLEKVHASLNGILPLDIRVREITTVPPIFHARFSALKKTYAYKIYNS 521
            GQVAHF+TPF    L+  HA+LNG+LP DIRVRE++   P FHARFSA  K Y Y+IYN 
Sbjct: 101  GQVAHFVTPFNYTSLDSFHAALNGLLPKDIRVRELSAAVPEFHARFSAHSKVYRYQIYND 160

Query: 522  TIMDPFQRLYAQHCAYKLNADAMSEAAKFFVGQHDFSAF--RTSNNFLPKHPIREIFRFD 695
            T MDPFQR +A HCAYKLNA  M EAA  FVG HDFSAF   T  + LP  P++ I RFD
Sbjct: 161  TFMDPFQRHWAYHCAYKLNASKMREAANLFVGMHDFSAFANATREDGLP-DPLKTISRFD 219

Query: 696  LVKMGSLLQLEIEGTGFFYRQIRNMVGLLIEIGKEALPVDIVCDVLKSCDRRKLAKLSRV 875
            +++MGSLLQLE+EG+GF YRQ+RNMV LLI+IGKEAL  DIV  +L++ DRR LAK + +
Sbjct: 220  VIQMGSLLQLEVEGSGFLYRQVRNMVALLIQIGKEALDSDIVPMILETKDRRVLAKYTTL 279

Query: 876  -ALPQGLCLMNVDYCSAHLESPIGSPLPSFGRHKQIQKCILPY 1001
             A P GLCL++V Y  +HL+ P+  P+ SFGRH  I KC LP+
Sbjct: 280  PAPPHGLCLVSVKYRESHLKLPLDCPVTSFGRHHTITKCKLPF 322


>ref|XP_006419216.1| hypothetical protein CICLE_v10005313mg [Citrus clementina]
            gi|557521089|gb|ESR32456.1| hypothetical protein
            CICLE_v10005313mg [Citrus clementina]
          Length = 351

 Score =  348 bits (892), Expect = 3e-93
 Identities = 172/302 (56%), Positives = 213/302 (70%), Gaps = 22/302 (7%)
 Frame = +3

Query: 162  WKWKLVIAYEGTRYAGWQYQEKPKSVQCLVEEALRKTTKLGREDLALVGASRTDAGVHAW 341
            +KW+LVIAY+GTRYAGWQ+Q  P ++QC+VE+AL + TKL REDL LVGASRTD GVHAW
Sbjct: 49   FKWRLVIAYDGTRYAGWQFQTSPPTIQCIVEKALIRVTKLEREDLRLVGASRTDTGVHAW 108

Query: 342  GQVAHFMTPFLLEDLEKVHASLNGILPLDIRVREITTVPPIFHARFSALKKTYAYKIYNS 521
            GQVAHF+TPF  + LE +HA+LNG+LP DIRVREI+   P FHARFSA  K Y YKIYN 
Sbjct: 109  GQVAHFITPFSYDGLESIHAALNGLLPPDIRVREISAAVPEFHARFSAKSKIYHYKIYND 168

Query: 522  TIMDPFQRLYAQHCAYKLNADAMSEAAKFFVGQHDFSAF-RTSNNFLPKHPIREIFRFDL 698
             +MDPFQ  YA H  YKLN   M EAA++FVG+HDFSAF     N    +P++ IFRFD+
Sbjct: 169  AVMDPFQHHYAYHSVYKLNTTLMREAAEYFVGKHDFSAFVNIQRNDRALNPVKSIFRFDV 228

Query: 699  VKMGSLLQLEIEGTGFFYRQIRNM---------------------VGLLIEIGKEALPVD 815
            ++MG+LLQLE+EG+GF YRQ+RNM                     V LL++IGKEA+P D
Sbjct: 229  IEMGALLQLEVEGSGFLYRQVRNMGSSRVSSQNWFMKHSCCSNLQVALLLQIGKEAIPPD 288

Query: 816  IVCDVLKSCDRRKLAKLSRVALPQGLCLMNVDYCSAHLESPIGSPLPSFGRHKQIQKCIL 995
            IV  +L + DR++LAK +  A P GLCL+ V Y   HL  P   PL SFGRH  ++KC L
Sbjct: 289  IVPKILATQDRKELAKYALSAPPHGLCLVEVKYNEEHLRLPAACPLSSFGRHHSVRKCKL 348

Query: 996  PY 1001
            P+
Sbjct: 349  PF 350


>ref|XP_003609879.1| tRNA pseudouridine synthase family protein [Medicago truncatula]
           gi|355510934|gb|AES92076.1| tRNA pseudouridine synthase
           family protein [Medicago truncatula]
          Length = 322

 Score =  347 bits (891), Expect = 3e-93
 Identities = 168/277 (60%), Positives = 213/277 (76%), Gaps = 1/277 (0%)
 Frame = +3

Query: 162 WKWKLVIAYEGTRYAGWQYQEKPKSVQCLVEEALRKTTKLGREDLALVGASRTDAGVHAW 341
           +KW+L+++Y+GTRYAGWQYQE P +VQC VE+AL + TKL R+DL LVGASRTDAGVHAW
Sbjct: 42  YKWRLLLSYDGTRYAGWQYQESPPTVQCAVEKALIRATKLQRKDLQLVGASRTDAGVHAW 101

Query: 342 GQVAHFMTPFLLEDLEKVHASLNGILPLDIRVREITTVPPIFHARFSALKKTYAYKIYNS 521
           GQVAHF+TPF  ++L+ VHA+LNG+LP DIRVREI+     FHARFS   K Y YKIY+ 
Sbjct: 102 GQVAHFLTPFNYDNLDSVHAALNGLLPSDIRVREISPASAEFHARFSVKSKIYHYKIYSD 161

Query: 522 TIMDPFQRLYAQHCAYKLNADAMSEAAKFFVGQHDFSAF-RTSNNFLPKHPIREIFRFDL 698
           TIMDPFQR +A H  YKLN+ AM EAA++F+G+HDF+AF   S+N     P++ IFRFD+
Sbjct: 162 TIMDPFQRHFAYHNMYKLNSAAMREAARYFIGKHDFTAFENASHNDRIPDPVKHIFRFDV 221

Query: 699 VKMGSLLQLEIEGTGFFYRQIRNMVGLLIEIGKEALPVDIVCDVLKSCDRRKLAKLSRVA 878
            +MG+LLQLE+EG+GF YRQ+RNMV LL++IGKEA P DIV  +L S DR++LAK     
Sbjct: 222 KEMGALLQLEVEGSGFLYRQVRNMVALLLQIGKEATPPDIVPHILASRDRKELAKYCYYL 281

Query: 879 LPQGLCLMNVDYCSAHLESPIGSPLPSFGRHKQIQKC 989
            P GLCL++++Y  +HL  P G P  SFG H  I+KC
Sbjct: 282 PPHGLCLVSINYNESHLLPPPGCPAKSFGMHHTIRKC 318


>ref|XP_003609878.1| tRNA pseudouridine synthase family protein [Medicago truncatula]
           gi|355510933|gb|AES92075.1| tRNA pseudouridine synthase
           family protein [Medicago truncatula]
          Length = 350

 Score =  347 bits (891), Expect = 3e-93
 Identities = 168/277 (60%), Positives = 213/277 (76%), Gaps = 1/277 (0%)
 Frame = +3

Query: 162 WKWKLVIAYEGTRYAGWQYQEKPKSVQCLVEEALRKTTKLGREDLALVGASRTDAGVHAW 341
           +KW+L+++Y+GTRYAGWQYQE P +VQC VE+AL + TKL R+DL LVGASRTDAGVHAW
Sbjct: 70  YKWRLLLSYDGTRYAGWQYQESPPTVQCAVEKALIRATKLQRKDLQLVGASRTDAGVHAW 129

Query: 342 GQVAHFMTPFLLEDLEKVHASLNGILPLDIRVREITTVPPIFHARFSALKKTYAYKIYNS 521
           GQVAHF+TPF  ++L+ VHA+LNG+LP DIRVREI+     FHARFS   K Y YKIY+ 
Sbjct: 130 GQVAHFLTPFNYDNLDSVHAALNGLLPSDIRVREISPASAEFHARFSVKSKIYHYKIYSD 189

Query: 522 TIMDPFQRLYAQHCAYKLNADAMSEAAKFFVGQHDFSAF-RTSNNFLPKHPIREIFRFDL 698
           TIMDPFQR +A H  YKLN+ AM EAA++F+G+HDF+AF   S+N     P++ IFRFD+
Sbjct: 190 TIMDPFQRHFAYHNMYKLNSAAMREAARYFIGKHDFTAFENASHNDRIPDPVKHIFRFDV 249

Query: 699 VKMGSLLQLEIEGTGFFYRQIRNMVGLLIEIGKEALPVDIVCDVLKSCDRRKLAKLSRVA 878
            +MG+LLQLE+EG+GF YRQ+RNMV LL++IGKEA P DIV  +L S DR++LAK     
Sbjct: 250 KEMGALLQLEVEGSGFLYRQVRNMVALLLQIGKEATPPDIVPHILASRDRKELAKYCYYL 309

Query: 879 LPQGLCLMNVDYCSAHLESPIGSPLPSFGRHKQIQKC 989
            P GLCL++++Y  +HL  P G P  SFG H  I+KC
Sbjct: 310 PPHGLCLVSINYNESHLLPPPGCPAKSFGMHHTIRKC 346


>gb|EOY06929.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao]
          Length = 322

 Score =  347 bits (890), Expect = 4e-93
 Identities = 169/279 (60%), Positives = 211/279 (75%), Gaps = 1/279 (0%)
 Frame = +3

Query: 162 WKWKLVIAYEGTRYAGWQYQEKPKSVQCLVEEALRKTTKLGREDLALVGASRTDAGVHAW 341
           +KW+L+IAY+GT YAGWQ+Q  P +VQC+VE+AL + TKL REDL  VGASRTD GVHAW
Sbjct: 41  YKWRLLIAYDGTHYAGWQFQVSPPTVQCMVEKALVQITKLEREDLHFVGASRTDTGVHAW 100

Query: 342 GQVAHFMTPFLLEDLEKVHASLNGILPLDIRVREITTVPPIFHARFSALKKTYAYKIYNS 521
           GQVAHF+TPF  + LE +HA+LNG+LP DIRVRE++   P FHARFSA +K Y YKIYN 
Sbjct: 101 GQVAHFVTPFNYDSLENIHAALNGLLPSDIRVREMSAAIPEFHARFSAKRKVYHYKIYND 160

Query: 522 TIMDPFQRLYAQHCAYKLNADAMSEAAKFFVGQHDFSAF-RTSNNFLPKHPIREIFRFDL 698
           +IMDPFQR YA H  YKLN  AM EAAK F+G+HDFSAF   S N     P++ IFRFD+
Sbjct: 161 SIMDPFQRHYAYHSVYKLNTAAMREAAKKFIGKHDFSAFVNASRNDRVPDPVKTIFRFDV 220

Query: 699 VKMGSLLQLEIEGTGFFYRQIRNMVGLLIEIGKEALPVDIVCDVLKSCDRRKLAKLSRVA 878
           ++MG+LLQLE+EG+GF YRQ+RNMV LL++IG+E +P DIV  +L + DR++LAK +  A
Sbjct: 221 IEMGALLQLEVEGSGFLYRQVRNMVALLLQIGREVVPGDIVPKILATGDRKELAKYALSA 280

Query: 879 LPQGLCLMNVDYCSAHLESPIGSPLPSFGRHKQIQKCIL 995
            P GLCL+ V Y   HL  P+G P  S GRH  ++KC L
Sbjct: 281 PPHGLCLVAVKYKEEHLLLPLGCPSTSSGRHHTVRKCKL 319


>ref|XP_006488723.1| PREDICTED: tRNA pseudouridine synthase-like 1-like isoform X1 [Citrus
            sinensis]
          Length = 351

 Score =  346 bits (888), Expect = 7e-93
 Identities = 171/302 (56%), Positives = 212/302 (70%), Gaps = 22/302 (7%)
 Frame = +3

Query: 162  WKWKLVIAYEGTRYAGWQYQEKPKSVQCLVEEALRKTTKLGREDLALVGASRTDAGVHAW 341
            +KW+LVI Y+GTRYAGWQ+Q  P ++QC+VE+AL + TKL REDL LVGASRTD GVHAW
Sbjct: 49   FKWRLVIGYDGTRYAGWQFQTSPPTIQCIVEKALIRVTKLEREDLRLVGASRTDTGVHAW 108

Query: 342  GQVAHFMTPFLLEDLEKVHASLNGILPLDIRVREITTVPPIFHARFSALKKTYAYKIYNS 521
            GQVAHF+TPF  + LE +HA+LNG+LP DIRVREI+   P FHARFSA  K Y YKIYN 
Sbjct: 109  GQVAHFITPFSYDGLESIHAALNGLLPPDIRVREISAAVPEFHARFSAKSKIYHYKIYND 168

Query: 522  TIMDPFQRLYAQHCAYKLNADAMSEAAKFFVGQHDFSAF-RTSNNFLPKHPIREIFRFDL 698
             +MDPFQ  YA H  YKLN   M EAA++FVG+HDFSAF     N    +P++ IFRFD+
Sbjct: 169  AVMDPFQHHYAYHSVYKLNTTLMREAAEYFVGKHDFSAFVNIQRNDRALNPVKSIFRFDV 228

Query: 699  VKMGSLLQLEIEGTGFFYRQIRNM---------------------VGLLIEIGKEALPVD 815
            ++MG+LLQLE+EG+GF YRQ+RNM                     V LL++IGKEA+P D
Sbjct: 229  IEMGALLQLEVEGSGFLYRQVRNMGSSRVSSQNWFMKHSCCSNLQVALLLQIGKEAIPPD 288

Query: 816  IVCDVLKSCDRRKLAKLSRVALPQGLCLMNVDYCSAHLESPIGSPLPSFGRHKQIQKCIL 995
            IV  +L + DR++LAK +  A P GLCL+ V Y   HL  P   PL SFGRH  ++KC L
Sbjct: 289  IVPKILATQDRKELAKYALSAPPHGLCLVEVKYNEEHLRLPAACPLSSFGRHHSVRKCKL 348

Query: 996  PY 1001
            P+
Sbjct: 349  PF 350


>gb|EMJ23827.1| hypothetical protein PRUPE_ppa008515mg [Prunus persica]
          Length = 328

 Score =  345 bits (886), Expect = 1e-92
 Identities = 167/281 (59%), Positives = 208/281 (74%), Gaps = 1/281 (0%)
 Frame = +3

Query: 162  WKWKLVIAYEGTRYAGWQYQEKPKSVQCLVEEALRKTTKLGREDLALVGASRTDAGVHAW 341
            +KW+LVIAY+GTRYAGWQYQ  P ++QC VE+ L + TKL R+DL+LVGASRTD GVHAW
Sbjct: 47   YKWRLVIAYDGTRYAGWQYQSSPPTIQCFVEKVLMQATKLERKDLSLVGASRTDKGVHAW 106

Query: 342  GQVAHFMTPFLLEDLEKVHASLNGILPLDIRVREITTVPPIFHARFSALKKTYAYKIYNS 521
            GQVAHF+TPF  + ++ +HA+LNG+LP DIRVREI+   P FHARFSA  K Y YK+YN 
Sbjct: 107  GQVAHFVTPFNYDSIDSIHAALNGLLPSDIRVREISPAVPEFHARFSAKSKIYHYKVYND 166

Query: 522  TIMDPFQRLYAQHCAYKLNADAMSEAAKFFVGQHDFSAF-RTSNNFLPKHPIREIFRFDL 698
            T MDPFQR YA H A+KLN   M EAAK+F+G+HDFSAF   S     + P++ IFRFD+
Sbjct: 167  TFMDPFQRDYAYHSAHKLNPAVMREAAKYFIGKHDFSAFANASQKERVRDPVKNIFRFDV 226

Query: 699  VKMGSLLQLEIEGTGFFYRQIRNMVGLLIEIGKEALPVDIVCDVLKSCDRRKLAKLSRVA 878
            ++MG+LLQLE+EG+GF YRQ+RNMV LL++IG+EALP  +V  +L + DRR+LAK +  A
Sbjct: 227  IEMGALLQLEVEGSGFLYRQVRNMVSLLLQIGREALPPYVVPMILATRDRRELAKYAMFA 286

Query: 879  LPQGLCLMNVDYCSAHLESPIGSPLPSFGRHKQIQKCILPY 1001
             P GL L  V Y   HL  P G    SFGRH  I  C LP+
Sbjct: 287  PPHGLSLATVKYNEEHLRLPSGCSTTSFGRHYTIGSCKLPF 327


>ref|NP_187351.2| pseudouridine synthase family protein [Arabidopsis thaliana]
            gi|119360081|gb|ABL66769.1| At3g06950 [Arabidopsis
            thaliana] gi|332640958|gb|AEE74479.1| pseudouridine
            synthase family protein [Arabidopsis thaliana]
          Length = 323

 Score =  345 bits (884), Expect = 2e-92
 Identities = 171/283 (60%), Positives = 216/283 (76%), Gaps = 3/283 (1%)
 Frame = +3

Query: 162  WKWKLVIAYEGTRYAGWQYQEKPKSVQCLVEEALRKTTKLGREDLALVGASRTDAGVHAW 341
            +KW+LVIAY+GTR+AGWQYQE P ++Q ++E+AL + T+LGR++L L+GA RTDAGVHAW
Sbjct: 41   YKWRLVIAYDGTRFAGWQYQESPPTIQSMLEKALIQITELGRKELQLIGAGRTDAGVHAW 100

Query: 342  GQVAHFMTPFLLEDLEKVHASLNGILPLDIRVREITTVPPIFHARFSALKKTYAYKIYNS 521
            GQVAHF+TPF    L+  HA+LNG+LP DIRVRE++   P FHARFSA  K Y Y+IYN 
Sbjct: 101  GQVAHFVTPFNYTSLDSFHAALNGLLPKDIRVRELSAAVPEFHARFSASSKVYRYQIYND 160

Query: 522  TIMDPFQRLYAQHCAYKLNADAMSEAAKFFVGQHDFSAF--RTSNNFLPKHPIREIFRFD 695
            T MDPFQR +A HCAYKLNA  M EAA  FVG+HDFSAF   T  + +P  P++ I RFD
Sbjct: 161  TFMDPFQRHWAYHCAYKLNASKMREAANLFVGKHDFSAFANATREDGVP-DPLKTISRFD 219

Query: 696  LVKMGSLLQLEIEGTGFFYRQIRNMVGLLIEIGKEALPVDIVCDVLKSCDRRKLAKLSRV 875
            +++MGSLLQLE+EG+GF YRQ+RNMV LLI+IGKEAL  DIV  +L++ DRR LAK + +
Sbjct: 220  VIQMGSLLQLEVEGSGFLYRQVRNMVALLIQIGKEALDSDIVPMILETKDRRVLAKYTSL 279

Query: 876  -ALPQGLCLMNVDYCSAHLESPIGSPLPSFGRHKQIQKCILPY 1001
             A P GLCL++V Y   HL+ P+  P+ S GRH  I KC LP+
Sbjct: 280  PASPHGLCLVSVKYKEDHLKLPLDCPVTSSGRHHTITKCKLPF 322


>dbj|BAF00823.1| putative tRNA pseudouridine synthase [Arabidopsis thaliana]
          Length = 323

 Score =  345 bits (884), Expect = 2e-92
 Identities = 171/283 (60%), Positives = 216/283 (76%), Gaps = 3/283 (1%)
 Frame = +3

Query: 162  WKWKLVIAYEGTRYAGWQYQEKPKSVQCLVEEALRKTTKLGREDLALVGASRTDAGVHAW 341
            +KW+LVIAY+GTR+AGWQYQE P ++Q ++E+AL + T+LGR++L L+GA RTDAGVHAW
Sbjct: 41   YKWRLVIAYDGTRFAGWQYQESPPTIQSMLEKALIQITELGRKELQLIGAGRTDAGVHAW 100

Query: 342  GQVAHFMTPFLLEDLEKVHASLNGILPLDIRVREITTVPPIFHARFSALKKTYAYKIYNS 521
            GQVAHF+TPF    L+  HA+LNG+LP DIRVRE++   P FHARFSA  K Y Y+IYN 
Sbjct: 101  GQVAHFVTPFNYTSLDSFHAALNGLLPKDIRVRELSAAVPEFHARFSASSKVYRYQIYND 160

Query: 522  TIMDPFQRLYAQHCAYKLNADAMSEAAKFFVGQHDFSAF--RTSNNFLPKHPIREIFRFD 695
            T MDPFQR +A HCAYKLNA  M EAA  FVG+HDFSAF   T  + +P  P++ I RFD
Sbjct: 161  TFMDPFQRHWAYHCAYKLNASKMREAANLFVGKHDFSAFANATREDGVP-DPLKTISRFD 219

Query: 696  LVKMGSLLQLEIEGTGFFYRQIRNMVGLLIEIGKEALPVDIVCDVLKSCDRRKLAKLSRV 875
            +++MGSLLQLE+EG+GF YRQ+RNMV LLI+IGKEAL  DIV  +L++ DRR LAK + +
Sbjct: 220  VIQMGSLLQLEVEGSGFLYRQVRNMVALLIQIGKEALDSDIVPMILETKDRRVLAKYTSL 279

Query: 876  -ALPQGLCLMNVDYCSAHLESPIGSPLPSFGRHKQIQKCILPY 1001
             A P GLCL++V Y   HL+ P+  P+ S GRH  I KC LP+
Sbjct: 280  PASPHGLCLVSVKYKEDHLKLPLDCPVTSSGRHHTITKCKLPF 322