BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00022524
         (1542 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001776817.1| predicted protein [Physcomitrella patens] gi...   252   3e-64
ref|XP_001766677.1| predicted protein [Physcomitrella patens] gi...   199   3e-48
ref|XP_005643667.1| hypothetical protein COCSUDRAFT_59606 [Cocco...   110   1e-21
ref|XP_005648615.1| hypothetical protein COCSUDRAFT_47126 [Cocco...    61   1e-06

>ref|XP_001776817.1| predicted protein [Physcomitrella patens] gi|162671821|gb|EDQ58367.1|
            predicted protein [Physcomitrella patens]
          Length = 623

 Score =  252 bits (643), Expect = 3e-64
 Identities = 133/362 (36%), Positives = 214/362 (59%), Gaps = 8/362 (2%)
 Frame = -2

Query: 1064 GVCLFIVTLVASAPYFLTWSP-GLNSALYLTNKVIPGKISVKSVSLGWTKNVIIEDAILQ 888
            GV L + T+ A+A   +  SP GL + + + +  IPG +SV   SLGW K + +E   L+
Sbjct: 137  GVLLVLATIFAAAAPSMFSSPRGLKTIMSMASHTIPGTVSVARASLGWRKPLYLEGVTLK 196

Query: 887  GTDGGTVLRIPSLETKSTLWSLVLGNAGFGDCIINSPMIDLQEEKETGLSRLSLAIMPXX 708
            G DG TVL IP +ET+++LWS+V G AGFGD  + +P++DLQ++  +G   L+LA+ P  
Sbjct: 197  GIDGETVLYIPKIETRASLWSIVSGKAGFGDSTVTAPVVDLQQDPASGQPYLALALTPLA 256

Query: 707  XXXXXXXXXXXXXVHFPAVH----VGMLLNIKAPNGDLKVLNGNILLPQDLAAVTGKKIH 540
                             A+     V +  ++KAPNG ++++ G ++LPQD A   G  I 
Sbjct: 257  KLQENKPNLNNSKKRSVAIEPPRDVALAASVKAPNGGMEIVKGKVILPQDAATAIGPSIF 316

Query: 539  IDILLGHSAKQFIQ--EEGLDNIPRSLPLHFGLWSECMEAKATGFFDSRHMNIKLTRPVK 366
            +D+  G  A +     E         LP+   ++S+  +A+  GF       I L RP+K
Sbjct: 317  LDVAAGRFATEADDALESAAHEYRGKLPIRGNIYSDRAQAEGLGFLSLPQGQIHLLRPLK 376

Query: 365  IEVDLTPDVGRIHLKRINPLLGEILGPAVADEDMPDMVINISPEKMTIPADSYTVRIDPI 186
             E+DLTP+ G+++L R+NPLLGEI+GPA++++D+PD+ I  +P+   +P+D Y+VRI+P+
Sbjct: 377  AELDLTPEFGKLYLVRVNPLLGEIIGPAISEDDLPDITIYAAPKDFLLPSDEYSVRIEPM 436

Query: 185  KAVVARGPLVSGIFSLLSNGKRNAYMERDELQIETSPINARIGI-GGEVTCSRIDLLISG 9
            +  +A+G LV G+ +LL   +++    R ++   TSPI A I +  G + C RIDLL++ 
Sbjct: 437  RTTLAKGQLVDGVLTLLR--RQDLLKGRSQITALTSPIEASINLKTGVIACDRIDLLLAD 494

Query: 8    KV 3
            +V
Sbjct: 495  RV 496


>ref|XP_001766677.1| predicted protein [Physcomitrella patens] gi|162682109|gb|EDQ68530.1|
            predicted protein [Physcomitrella patens]
          Length = 490

 Score =  199 bits (506), Expect = 3e-48
 Identities = 121/396 (30%), Positives = 187/396 (47%), Gaps = 39/396 (9%)
 Frame = -2

Query: 1079 LKFTFGVCLFIVTLVASAPYFLTWSPGLNSALYLTNKVIPGKISVKSVSLGWTKNVIIED 900
            +KF  GV       VA APY ++   GL++ L++ N  IPG +SV+SVSLGW K + IE 
Sbjct: 1    MKFVGGVVAITGAAVAGAPYLISRPFGLHTLLFVINSSIPGTLSVESVSLGWNKPIHIEG 60

Query: 899  AILQGTDGGTVLRIPSLETKSTLWSLVLGNAGFGDCIINSPMIDLQEEKETGLSRLSLAI 720
             IL+G +   VL IP  +T + LW+LV+G AG GD ++  P +D++ + E+G     LA+
Sbjct: 61   VILKGPNSSAVLLIPEYKTNAHLWTLVVGRAGLGDAVVLQPTLDMRNDPESGHPYYDLAV 120

Query: 719  MPXXXXXXXXXXXXXXXVHFPAVHVGMLLNIKAPNGDLKVLNGNILLPQDLAAVTGKKIH 540
                                P+  V     ++AP G L+VLNG ++LP DLAAV G  ++
Sbjct: 121  TSVDKLNVSNPYVKKKFKVLPSEVVSWTAKMRAPEGGLEVLNGKVILPGDLAAVLGAHLY 180

Query: 539  IDILLGHSAKQFIQEEGLDN--IPRSLPLHFGLWSECMEAKATGFFDSRHMNIKLTRPVK 366
             DI  G  A +        N  +    P+   L S C   +A  + + R   ++L +P+ 
Sbjct: 181  FDIAFGSYATEMNPSLWKANGELSGRTPIRCSLCSNCAHLEALAYLNLRRKRMELLQPIL 240

Query: 365  IE-------------------------------------VDLTPDVGRIHLKRINPLLGE 297
             E                                     +DL+P + + +L +INP+LG+
Sbjct: 241  AEASRIVQLTYSVDFDEDEIKSVGPRPCIKTGFAKTSLNMDLSPALAKFYLAQINPILGQ 300

Query: 296  ILGPAVADEDMPDMVINISPEKMTIPADSYTVRIDPIKAVVARGPLVSGIFSLLSNGKRN 117
            I+GP+   ED+PD+ +++ P  M  P   Y +RI+P+K                      
Sbjct: 301  IVGPSFGREDLPDVSMSLKPTDMMWPTTEYLIRIEPMKV--------------------- 339

Query: 116  AYMERDELQIETSPINARIGIGGEVTCSRIDLLISG 9
                       TS I A + +GG++TCSR+DLLI+G
Sbjct: 340  -----------TSAIEANVHVGGKLTCSRVDLLIAG 364


>ref|XP_005643667.1| hypothetical protein COCSUDRAFT_59606 [Coccomyxa subellipsoidea
            C-169] gi|384245630|gb|EIE19123.1| hypothetical protein
            COCSUDRAFT_59606 [Coccomyxa subellipsoidea C-169]
          Length = 548

 Score =  110 bits (276), Expect = 1e-21
 Identities = 102/383 (26%), Positives = 166/383 (43%), Gaps = 25/383 (6%)
 Frame = -2

Query: 1082 LLKFTFGVCLFIVTLVASAPYFLTWSPGLNSALYLTNKVIPGKISVKSVSLGWTKNVIIE 903
            + K   G+ L +   V + P  L+   GL SAL + N+ +PG ++VK  SLGW K V IE
Sbjct: 1    MAKVAGGLALVLAAFVVALPSILSTKAGLRSALAVANRFVPGTVAVKQASLGWRKPVNIE 60

Query: 902  DAI---LQGTDGGTVLRIPSLETKSTLWSLVLGNAGFGDCIINSPMID--LQEEKETGLS 738
                  L    G  V+ +PS+ + ++LW +  G     + +++SP +D  L EE E    
Sbjct: 61   HVEWGDLSEAGGSAVVEVPSIRSSASLWEIARGREY--EVVVSSPRVDGSLTEEGEL--- 115

Query: 737  RLSLAIMPXXXXXXXXXXXXXXXVHFPAVHVGMLLNIKAPNGDLKVLNGNIL-LPQDLAA 561
            RL                         +  V      K  +G L V  G I  LP     
Sbjct: 116  RLQQVAQGKAAPLARADTPGGVKAKVGSEDVRFAAEGKFLSGHLYVSGGIIHGLPCAAKE 175

Query: 560  VTGKKIHIDILLGHSAKQF--------IQEEGLDNIPRSL----------PLHFGLWSEC 435
            V G  +H+  ++G  AKQ         I+   +DN P+            P    + S+ 
Sbjct: 176  VVGNDLHLTAIVG--AKQLKADGPDYDIEAGWVDNTPKPPRSRNIGKPLEPTVIKVASQH 233

Query: 434  MEAKATGFFDSRHMNIKLTRPVKIEVDLTPDVGRIHLKRINPLLGEILGPAVADEDMPDM 255
            + A+ +G+  +    I L  P+      TP + +    ++ PLL ++     A E+   +
Sbjct: 234  INAQLSGWRTAD--GIILREPITASFAYTPALAKYGFAKVAPLLADV----AAVEEGGLV 287

Query: 254  VINISPEKMTIPADSYTVRIDPIKAVVARGPLV-SGIFSLLSNGKRNAYMERDELQIETS 78
             ++ +P+KM +PA+   VR++P++  V RGPL+   I  L S G          LQ +TS
Sbjct: 288  SVSATPDKMELPAERVAVRVEPLRLKVGRGPLLGKAIEFLASQGSGGVRARGSLLQAQTS 347

Query: 77   PINARIGIGGEVTCSRIDLLISG 9
             I   +   G +   R+D+L+ G
Sbjct: 348  AICVDLLGSGALQTQRLDVLVGG 370


>ref|XP_005648615.1| hypothetical protein COCSUDRAFT_47126 [Coccomyxa subellipsoidea
           C-169] gi|384250592|gb|EIE24071.1| hypothetical protein
           COCSUDRAFT_47126 [Coccomyxa subellipsoidea C-169]
          Length = 575

 Score = 61.2 bits (147), Expect = 1e-06
 Identities = 54/220 (24%), Positives = 104/220 (47%), Gaps = 14/220 (6%)
 Frame = -2

Query: 629 IKAPNGDLKVLNGNILLPQDLAAVTGKKIHIDILLGHSA-KQFIQEEGLD-----NIPRS 468
           +K P   +++ +G +++ +++  V G  +  +  +G S  +Q  +  G+D     + P  
Sbjct: 132 VKIPFVVIQLADGTLVVHEEIGQVFGGYVRFEAAVGVSVVRQAAEANGVDCSWINSRPED 191

Query: 467 LPLH------FGLW--SECMEAKATGFFDSRHMNIKLTRPVKIEVDLTPDVGRIHLKRIN 312
             L       FGL   +E ++ KA+G+  +      L +P    V  TP + +  L R++
Sbjct: 192 TKLTGRPIQPFGLKLDTEHLDMKASGWRTTT--GFLLRQPASATVTFTPALAKYGLARLH 249

Query: 311 PLLGEILGPAVADEDMPDMVINISPEKMTIPADSYTVRIDPIKAVVARGPLVSGIFSLLS 132
           P L  ++    A ++   +   ++P  M IP ++ T+R+ P+K  +    L  G   LL 
Sbjct: 250 PFLSHVM----ALKEANSVTAAVTPLAMHIPFEAMTIRVSPLKLQIKGSRLTRGAIRLLE 305

Query: 131 NGKRNAYMERDELQIETSPINARIGIGGEVTCSRIDLLIS 12
             K++   +   L+  TS I A +   GE+   R+D+LIS
Sbjct: 306 FRKKSG--KGGGLECWTSAIEADVYRSGELVSKRMDVLIS 343