BLASTX nr result

ID: Ephedra28_contig00022464 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00022464
         (783 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY25254.1| Dimerizations, putative [Theobroma cacao]               60   8e-07

>gb|EOY25254.1| Dimerizations, putative [Theobroma cacao]
          Length = 739

 Score = 60.1 bits (144), Expect = 8e-07
 Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 13/151 (8%)
 Frame = +2

Query: 299 KLQCIWGL-ADNGTQRNLIPELFATCEKDLLIL-----LQGTCQDKTKLDIRSTSDSILS 460
           KLQ IWGL +D    RNLI +LFA C KD+ +L     +    +    L ++S+ D  L 
Sbjct: 221 KLQDIWGLPSDQQFGRNLISKLFAVCSKDINVLFGFISISSPSKTMEPLAVKSSVDMALQ 280

Query: 461 TGCLSGANHQEVVKLSPLFGTLHFLLGRAVHSMSSFEALVETLFEFCTHKDENIICSALR 640
              +   +  E  K+S  +  L     +  + MS  EAL E+LF+ C+ ++  I+ S+L 
Sbjct: 281 HS-MQPFHSSEAAKVSRFYSALT----KIGNGMSQLEALFESLFDLCSVENVVIVYSSLC 335

Query: 641 ILNFILK-------LHYSSYIQHAASSLVLH 712
           IL  +LK           S+ Q+A S + L+
Sbjct: 336 ILYVLLKHLLTFERKSEGSFCQYALSDIALY 366


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