BLASTX nr result
ID: Ephedra28_contig00022421
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00022421
(462 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006836595.1| hypothetical protein AMTR_s00131p00098210 [A... 105 2e-31
ref|XP_006364563.1| PREDICTED: pentatricopeptide repeat-containi... 106 1e-28
ref|XP_004240634.1| PREDICTED: pentatricopeptide repeat-containi... 105 1e-28
ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containi... 104 2e-28
ref|XP_002530052.1| pentatricopeptide repeat-containing protein,... 97 1e-27
ref|XP_006417164.1| hypothetical protein EUTSA_v10007381mg [Eutr... 98 3e-26
gb|EMJ28460.1| hypothetical protein PRUPE_ppa017811mg [Prunus pe... 94 2e-25
ref|XP_002312667.1| pentatricopeptide repeat-containing family p... 91 4e-25
gb|EOY00680.1| Pentatricopeptide repeat superfamily protein isof... 93 1e-24
gb|EXB82495.1| hypothetical protein L484_027670 [Morus notabilis] 90 3e-24
gb|EPS65318.1| hypothetical protein M569_09460 [Genlisea aurea] 94 1e-23
gb|ESW31683.1| hypothetical protein PHAVU_002G258900g [Phaseolus... 94 4e-23
ref|XP_006304861.1| hypothetical protein CARUB_v10012598mg [Caps... 87 7e-23
ref|XP_004504137.1| PREDICTED: pentatricopeptide repeat-containi... 91 7e-23
ref|XP_004310156.1| PREDICTED: pentatricopeptide repeat-containi... 86 2e-22
ref|XP_003531325.2| PREDICTED: pentatricopeptide repeat-containi... 92 3e-22
ref|XP_006483972.1| PREDICTED: pentatricopeptide repeat-containi... 98 4e-22
ref|NP_172763.1| pentatricopeptide repeat-containing protein [Ar... 87 4e-22
ref|XP_002889980.1| pentatricopeptide repeat-containing protein ... 85 4e-22
ref|XP_006438222.1| hypothetical protein CICLE_v10031251mg [Citr... 97 6e-22
>ref|XP_006836595.1| hypothetical protein AMTR_s00131p00098210 [Amborella trichopoda]
gi|548839134|gb|ERM99448.1| hypothetical protein
AMTR_s00131p00098210 [Amborella trichopoda]
Length = 704
Score = 105 bits (263), Expect(2) = 2e-31
Identities = 49/106 (46%), Positives = 71/106 (66%)
Frame = -3
Query: 457 QGIVFKTAVYNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDK 278
+GI T VYNALI FC G + KA+ + +FM +NG D+ TYNT++++ + +
Sbjct: 376 RGIALTTPVYNALINGFCSIGRIDKAQAIVAFMRRNGCTPDLVTYNTMLNYCCNENLVFE 435
Query: 277 AENLLEKMTYQNISPDGFTYNSLLEGYCKANRLEKAYSLLTGKMDA 140
AE L+EKM I+PD ++YN LL+GYC AN+L+KAY LL KM++
Sbjct: 436 AEKLIEKMKRYGINPDKYSYNILLKGYCNANQLDKAYLLLVDKMES 481
Score = 55.8 bits (133), Expect(2) = 2e-31
Identities = 24/41 (58%), Positives = 35/41 (85%)
Frame = -2
Query: 125 VISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSYTT 3
V+SYN I+ ALC + R+ TAYK+++EMS KGISP+VV+Y++
Sbjct: 487 VVSYNTIVGALCRVRRAGTAYKLMEEMSMKGISPDVVTYSS 527
Score = 62.4 bits (150), Expect(2) = 4e-12
Identities = 31/96 (32%), Positives = 49/96 (51%)
Frame = -3
Query: 448 VFKTAVYNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKAEN 269
+F YN ++ A CR A L M G D+ TY++LI+ + + G +D AE
Sbjct: 484 IFDVVSYNTIVGALCRVRRAGTAYKLMEEMSMKGISPDVVTYSSLINGFFREGHIDLAEE 543
Query: 268 LLEKMTYQNISPDGFTYNSLLEGYCKANRLEKAYSL 161
L ++ PD TY ++ + CK+ R+E+A SL
Sbjct: 544 LFNQILDVGFVPDVVTYTTMFDHLCKSGRVEQARSL 579
Score = 34.3 bits (77), Expect(2) = 4e-12
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = -2
Query: 125 VISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSY 9
+ISYN ++D LC S A +V +EM G P+ V+Y
Sbjct: 592 MISYNALIDGLCKAFMVSEAVEVYEEMVHGGCEPDEVTY 630
Score = 60.1 bits (144), Expect(2) = 5e-11
Identities = 29/96 (30%), Positives = 53/96 (55%)
Frame = -3
Query: 430 YNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKAENLLEKMT 251
YN L+ +C A ++ KA +L ++ + D+ +YNT++ + R A L+E+M+
Sbjct: 455 YNILLKGYCNANQLDKAYLLLVDKMESKEIFDVVSYNTIVGALCRVRRAGTAYKLMEEMS 514
Query: 250 YQNISPDGFTYNSLLEGYCKANRLEKAYSLLTGKMD 143
+ ISPD TY+SL+ G+ + ++ A L +D
Sbjct: 515 MKGISPDVVTYSSLINGFFREGHIDLAEELFNQILD 550
Score = 32.7 bits (73), Expect(2) = 5e-11
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -2
Query: 125 VISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSY 9
V++Y + D LC GR A + M + G+ P+++SY
Sbjct: 557 VVTYTTMFDHLCKSGRVEQARSLFFNMIKNGVRPDMISY 595
Score = 66.6 bits (161), Expect = 3e-09
Identities = 34/96 (35%), Positives = 54/96 (56%)
Frame = -3
Query: 457 QGIVFKTAVYNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDK 278
+GI Y++LI F R G + AE L + + G + D+ TY T+ DH K GR+++
Sbjct: 516 KGISPDVVTYSSLINGFFREGHIDLAEELFNQILDVGFVPDVVTYTTMFDHLCKSGRVEQ 575
Query: 277 AENLLEKMTYQNISPDGFTYNSLLEGYCKANRLEKA 170
A +L M + PD +YN+L++G CKA + +A
Sbjct: 576 ARSLFFNMIKNGVRPDMISYNALIDGLCKAFMVSEA 611
Score = 55.1 bits (131), Expect = 1e-05
Identities = 32/109 (29%), Positives = 51/109 (46%)
Frame = -3
Query: 454 GIVFKTAVYNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKA 275
G V Y + C++G V +A L M KNG D+ +YN LID K + +A
Sbjct: 552 GFVPDVVTYTTMFDHLCKSGRVEQARSLFFNMIKNGVRPDMISYNALIDGLCKAFMVSEA 611
Query: 274 ENLLEKMTYQNISPDGFTYNSLLEGYCKANRLEKAYSLLTGKMDASVLL 128
+ E+M + PD TY+ L+ G + +L A + M+ ++L
Sbjct: 612 VEVYEEMVHGGCEPDEVTYHLLIGGLLRDEKLGMACKIWDQMMEKGLVL 660
>ref|XP_006364563.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like isoform X1 [Solanum tuberosum]
Length = 511
Score = 106 bits (264), Expect(2) = 1e-28
Identities = 47/108 (43%), Positives = 70/108 (64%)
Frame = -3
Query: 451 IVFKTAVYNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKAE 272
+ F T +YN LI FCRAG + KA+ + +FM +NG D+ TYN +++ +++A
Sbjct: 215 VKFNTEIYNTLINGFCRAGRIDKAQAIKTFMRRNGCEPDLVTYNVFLNYCCNELMLEEAV 274
Query: 271 NLLEKMTYQNISPDGFTYNSLLEGYCKANRLEKAYSLLTGKMDASVLL 128
L+EKM + PDG++YN LL G+CKANRL+KAY L+ KM+ L+
Sbjct: 275 KLIEKMEGNGLEPDGYSYNQLLRGFCKANRLDKAYKLMVDKMETKGLV 322
Score = 45.8 bits (107), Expect(2) = 1e-28
Identities = 21/42 (50%), Positives = 28/42 (66%)
Frame = -2
Query: 131 VSVISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSYT 6
V V+SYN I+ ALC S AY + +EM QK I P+VV++T
Sbjct: 322 VDVVSYNTIIRALCKTDHSKKAYNLFEEMEQKKIVPDVVTFT 363
Score = 55.5 bits (132), Expect(2) = 4e-11
Identities = 38/116 (32%), Positives = 56/116 (48%), Gaps = 1/116 (0%)
Frame = -3
Query: 460 GQGIVFKTAVYNALIAAFCRAGEVAKA-EILASFMEKNGSLQDIFTYNTLIDHYSKFGRM 284
G G+ YN L+ FC+A + KA +++ ME G L D+ +YNT+I K
Sbjct: 282 GNGLEPDGYSYNQLLRGFCKANRLDKAYKLMVDKMETKG-LVDVVSYNTIIRALCKTDHS 340
Query: 283 DKAENLLEKMTYQNISPDGFTYNSLLEGYCKANRLEKAYSLLTGKMDASVLLALYP 116
KA NL E+M + I PD T+ L+E K A +L +D + L+P
Sbjct: 341 KKAYNLFEEMEQKKIVPDVVTFTILIEASLKEGNSSVAKAL----VDQMTSMGLFP 392
Score = 37.7 bits (86), Expect(2) = 4e-11
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = -2
Query: 134 FVSVISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSY 9
F + Y I+D LC G+ A + ++M ++G++P+V+SY
Sbjct: 391 FPDRVLYTSIIDNLCKTGKLGVAESIFRDMVEQGVAPDVISY 432
Score = 64.7 bits (156), Expect = 1e-08
Identities = 33/97 (34%), Positives = 53/97 (54%)
Frame = -3
Query: 451 IVFKTAVYNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKAE 272
IV + LI A + G + A+ L M G D Y ++ID+ K G++ AE
Sbjct: 355 IVPDVVTFTILIEASLKEGNSSVAKALVDQMTSMGLFPDRVLYTSIIDNLCKTGKLGVAE 414
Query: 271 NLLEKMTYQNISPDGFTYNSLLEGYCKANRLEKAYSL 161
++ M Q ++PD +YN+L+ G+CKA+R+ +A SL
Sbjct: 415 SIFRDMVEQGVAPDVISYNALISGFCKASRVTEALSL 451
Score = 47.8 bits (112), Expect(2) = 4e-07
Identities = 30/107 (28%), Positives = 45/107 (42%)
Frame = -3
Query: 454 GIVFKTAVYNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKA 275
GIV YN + C V A L M + G D+ +Y +I + GR D A
Sbjct: 109 GIVPNFWAYNMYLNLLCSENLVDIALELIRVMGEKGREPDVVSYTIVISGLCRIGRFDNA 168
Query: 274 ENLLEKMTYQNISPDGFTYNSLLEGYCKANRLEKAYSLLTGKMDASV 134
+ M + + PD +L+ G C + R++ AY L G + V
Sbjct: 169 VEMWHTMIRKGLRPDNKACKALVFGLCGSGRVDLAYELTLGILRGQV 215
Score = 31.6 bits (70), Expect(2) = 4e-07
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = -2
Query: 137 CFVSVISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSY 9
C +++YN+ L+ CN A K++++M G+ P+ SY
Sbjct: 250 CEPDLVTYNVFLNYCCNELMLEEAVKLIEKMEGNGLEPDGYSY 292
>ref|XP_004240634.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Solanum lycopersicum]
Length = 511
Score = 105 bits (262), Expect(2) = 1e-28
Identities = 47/108 (43%), Positives = 71/108 (65%)
Frame = -3
Query: 451 IVFKTAVYNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKAE 272
+ F T +YN LI FCRAG + KA+ + +FM++NG D+ TYN +++ +++A
Sbjct: 215 VKFNTEIYNTLINGFCRAGRIDKAQAIKTFMKRNGCEPDLVTYNVFLNYCCNELMLEEAM 274
Query: 271 NLLEKMTYQNISPDGFTYNSLLEGYCKANRLEKAYSLLTGKMDASVLL 128
L+EKM + PDG++YN LL G+CKANRL+KAY L+ KM+ L+
Sbjct: 275 KLIEKMEGIGLEPDGYSYNQLLRGFCKANRLDKAYKLMVDKMETKGLV 322
Score = 46.6 bits (109), Expect(2) = 1e-28
Identities = 22/42 (52%), Positives = 29/42 (69%)
Frame = -2
Query: 131 VSVISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSYT 6
V V+SYN I+ ALC +S AY + KEM QK I P+VV++T
Sbjct: 322 VDVVSYNTIIRALCKTDQSKKAYILFKEMEQKKILPDVVTFT 363
Score = 50.4 bits (119), Expect(2) = 1e-09
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Frame = -3
Query: 430 YNALIAAFCRAGEVAKA-EILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKAENLLEKM 254
YN L+ FC+A + KA +++ ME G L D+ +YNT+I K + KA L ++M
Sbjct: 292 YNQLLRGFCKANRLDKAYKLMVDKMETKG-LVDVVSYNTIIRALCKTDQSKKAYILFKEM 350
Query: 253 TYQNISPDGFTYNSLLEGYCKANRLEKAYSLLTGKMDASVLLALYP 116
+ I PD T+ L+E K A +L +D + L+P
Sbjct: 351 EQKKILPDVVTFTILIEASLKEGNSSVAKAL----VDQMTSMGLFP 392
Score = 37.7 bits (86), Expect(2) = 1e-09
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = -2
Query: 134 FVSVISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSY 9
F + Y I+D LC G+ A + ++M ++G++P+V+SY
Sbjct: 391 FPDRVLYTSIIDNLCKTGKLGVAESIFRDMVEQGVAPDVISY 432
Score = 63.5 bits (153), Expect = 3e-08
Identities = 31/90 (34%), Positives = 51/90 (56%)
Frame = -3
Query: 430 YNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKAENLLEKMT 251
+ LI A + G + A+ L M G D Y ++ID+ K G++ AE++ M
Sbjct: 362 FTILIEASLKEGNSSVAKALVDQMTSMGLFPDRVLYTSIIDNLCKTGKLGVAESIFRDMV 421
Query: 250 YQNISPDGFTYNSLLEGYCKANRLEKAYSL 161
Q ++PD +YN+L+ G+CKA+R+ +A SL
Sbjct: 422 EQGVAPDVISYNALISGFCKASRVTEALSL 451
Score = 46.6 bits (109), Expect(2) = 2e-06
Identities = 29/107 (27%), Positives = 45/107 (42%)
Frame = -3
Query: 454 GIVFKTAVYNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKA 275
GIV YN + C V A L M + G D+ +Y +I + GR D A
Sbjct: 109 GIVPNFWAYNMYLNLLCSENLVDIALELIRVMGEKGREPDVVSYTIVISGLCRIGRFDNA 168
Query: 274 ENLLEKMTYQNISPDGFTYNSLLEGYCKANRLEKAYSLLTGKMDASV 134
+ M + + PD +L+ G C + +++ AY L G + V
Sbjct: 169 VEMWHTMIRKGLRPDNKACKALVFGLCGSGKVDLAYELTLGILRGQV 215
Score = 30.4 bits (67), Expect(2) = 2e-06
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = -2
Query: 137 CFVSVISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSY 9
C +++YN+ L+ CN A K++++M G+ P+ SY
Sbjct: 250 CEPDLVTYNVFLNYCCNELMLEEAMKLIEKMEGIGLEPDGYSY 292
>ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial [Vitis vinifera]
gi|296081374|emb|CBI16807.3| unnamed protein product
[Vitis vinifera]
Length = 519
Score = 104 bits (259), Expect(2) = 2e-28
Identities = 48/107 (44%), Positives = 73/107 (68%)
Frame = -3
Query: 451 IVFKTAVYNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKAE 272
I F ++YN+LI FC+AG + KA+ + SFM +NG D+ TYN L+++ +++AE
Sbjct: 215 IKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNGCEPDLVTYNVLLNYCCDELLLEEAE 274
Query: 271 NLLEKMTYQNISPDGFTYNSLLEGYCKANRLEKAYSLLTGKMDASVL 131
NL++KM + PD ++YN LL+G CKANRL+KAY ++ KM+A L
Sbjct: 275 NLMKKMERSGVEPDVYSYNELLKGLCKANRLDKAYMMMVNKMEAKGL 321
Score = 47.4 bits (111), Expect(2) = 2e-28
Identities = 20/40 (50%), Positives = 29/40 (72%)
Frame = -2
Query: 125 VISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSYT 6
V+SYN I+ ALC + AYK+ +EM KGI+P+VV++T
Sbjct: 324 VVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTFT 363
Score = 65.5 bits (158), Expect = 7e-09
Identities = 36/100 (36%), Positives = 52/100 (52%)
Frame = -3
Query: 460 GQGIVFKTAVYNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMD 281
G+GI + LI AF R G A+ L M G L D Y T++DH K G+M
Sbjct: 352 GKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMG 411
Query: 280 KAENLLEKMTYQNISPDGFTYNSLLEGYCKANRLEKAYSL 161
A ++ M I+PD +YN+L+ G C+A+R+ +A L
Sbjct: 412 MAHSVFCDMVESGITPDVVSYNALINGLCRASRVSEAMHL 451
Score = 53.9 bits (128), Expect(2) = 1e-08
Identities = 27/99 (27%), Positives = 50/99 (50%)
Frame = -3
Query: 430 YNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKAENLLEKMT 251
YN +I A C A +A L M G D+ T+ LI + + G + A+ LL++MT
Sbjct: 327 YNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMT 386
Query: 250 YQNISPDGFTYNSLLEGYCKANRLEKAYSLLTGKMDASV 134
+ PD Y ++++ CK ++ A+S+ +++ +
Sbjct: 387 GLGLLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVESGI 425
Score = 30.8 bits (68), Expect(2) = 1e-08
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = -2
Query: 125 VISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSY 9
V+SYN +++ LC R S A + ++M G P+ V++
Sbjct: 429 VVSYNALINGLCRASRVSEAMHLYEDMHTGGPCPDEVTF 467
Score = 45.1 bits (105), Expect(2) = 4e-08
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Frame = -3
Query: 430 YNALIAAFCRAGEVAKAEIL-ASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKAENLLEKM 254
YN L+ C+A + KA ++ + ME G L D+ +YNT+I +A L E+M
Sbjct: 292 YNELLKGLCKANRLDKAYMMMVNKMEAKG-LCDVVSYNTIIKALCTASHTKRAYKLFEEM 350
Query: 253 TYQNISPDGFTYNSLLEGYCKANRLEKAYSLLTGKMDASVL--LALYPTI 110
+ I+PD T+ L++ + + A LL +L LY TI
Sbjct: 351 GGKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTI 400
Score = 37.7 bits (86), Expect(2) = 4e-08
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = -2
Query: 122 ISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSY 9
+ Y I+D LC G+ A+ V +M + GI+P+VVSY
Sbjct: 395 VLYTTIVDHLCKTGKMGMAHSVFCDMVESGITPDVVSY 432
Score = 47.4 bits (111), Expect(2) = 2e-07
Identities = 27/95 (28%), Positives = 42/95 (44%)
Frame = -3
Query: 430 YNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKAENLLEKMT 251
YN + C ++ A + M + G DI TY +I+ + GR D A + M
Sbjct: 117 YNIYLNLLCCENQLDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMV 176
Query: 250 YQNISPDGFTYNSLLEGYCKANRLEKAYSLLTGKM 146
+ SPD +L+ G C +++ AY L G M
Sbjct: 177 RKGFSPDEKACRALVLGLCHDGKVDLAYELTVGAM 211
Score = 33.5 bits (75), Expect(2) = 2e-07
Identities = 13/43 (30%), Positives = 26/43 (60%)
Frame = -2
Query: 137 CFVSVISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSY 9
C +++YN++L+ C+ A ++K+M + G+ P+V SY
Sbjct: 250 CEPDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSY 292
Score = 42.0 bits (97), Expect(2) = 8e-06
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Frame = -3
Query: 430 YNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFT--YNTLIDHYSKFGRMDKAENLLEK 257
Y A I+++ +AG + +A L +F E S +F+ YN I + R D AE ++
Sbjct: 12 YRAQISSYVKAGLIDQA--LKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDR 69
Query: 256 MTYQNISPDGFTYNSLLEGYCKANRLEKAYSLL 158
M Q S + FTY+ + G CK LL
Sbjct: 70 MIPQGFSLNSFTYSRFISGLCKVKNFVLIEKLL 102
Score = 33.1 bits (74), Expect(2) = 8e-06
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = -2
Query: 119 SYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSYT 6
+YNI L+ LC + A V++ M +KG P++V+YT
Sbjct: 116 AYNIYLNLLCCENQLDVALGVVQTMVEKGREPDIVTYT 153
>ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223530468|gb|EEF32352.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 554
Score = 97.4 bits (241), Expect(2) = 1e-27
Identities = 46/102 (45%), Positives = 65/102 (63%)
Frame = -3
Query: 451 IVFKTAVYNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKAE 272
+ T VYNALI+ FCRAG + KA+ + SFM +NG D+ TYN ++++ +D A+
Sbjct: 216 VKLSTLVYNALISGFCRAGRIDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAK 275
Query: 271 NLLEKMTYQNISPDGFTYNSLLEGYCKANRLEKAYSLLTGKM 146
LL+ M I PD ++YN LL+G CK N +KAY L+T KM
Sbjct: 276 KLLKLMERSGIEPDVYSYNQLLKGICKGNCPDKAYLLMTNKM 317
Score = 51.6 bits (122), Expect(2) = 1e-27
Identities = 21/40 (52%), Positives = 32/40 (80%)
Frame = -2
Query: 125 VISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSYT 6
V+SYN I+ A C +G +++AYK+ +EM QKGI P+VV++T
Sbjct: 325 VVSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFT 364
Score = 61.6 bits (148), Expect(2) = 1e-11
Identities = 29/99 (29%), Positives = 53/99 (53%)
Frame = -3
Query: 430 YNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKAENLLEKMT 251
YN +I AFC+ G+ A L M + G D+ T+ I + G + A+ LL++MT
Sbjct: 328 YNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMT 387
Query: 250 YQNISPDGFTYNSLLEGYCKANRLEKAYSLLTGKMDASV 134
+SPD Y ++++ CK+ ++E A+S+ ++ +
Sbjct: 388 EMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGI 426
Score = 33.1 bits (74), Expect(2) = 1e-11
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = -2
Query: 125 VISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSY 9
VIS+N +++ C R S A + +EM +G P+ V+Y
Sbjct: 430 VISFNALINGFCKCSRVSEAMHLYEEMQNRGSYPDEVTY 468
Score = 62.0 bits (149), Expect = 8e-08
Identities = 33/99 (33%), Positives = 51/99 (51%)
Frame = -3
Query: 457 QGIVFKTAVYNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDK 278
+GI + I AF G A+ L M + G D Y T+IDH K G+++
Sbjct: 354 KGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEM 413
Query: 277 AENLLEKMTYQNISPDGFTYNSLLEGYCKANRLEKAYSL 161
A ++ M Q ISPD ++N+L+ G+CK +R+ +A L
Sbjct: 414 AHSIFCDMVEQGISPDVISFNALINGFCKCSRVSEAMHL 452
Score = 43.5 bits (101), Expect(2) = 2e-07
Identities = 26/91 (28%), Positives = 40/91 (43%)
Frame = -3
Query: 430 YNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKAENLLEKMT 251
YN L+ C+ KA +L + L D+ +YNT+I + K G A L E+M
Sbjct: 293 YNQLLKGICKGNCPDKAYLLMTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMG 352
Query: 250 YQNISPDGFTYNSLLEGYCKANRLEKAYSLL 158
+ I PD T+ ++ + A LL
Sbjct: 353 QKGIPPDVVTFTIFIKAFLGKGSFNIAKKLL 383
Score = 37.0 bits (84), Expect(2) = 2e-07
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = -2
Query: 122 ISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSY 9
I Y I+D LC G+ A+ + +M ++GISP+V+S+
Sbjct: 396 IFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISF 433
Score = 41.6 bits (96), Expect(2) = 3e-06
Identities = 20/70 (28%), Positives = 32/70 (45%)
Frame = -3
Query: 355 KNGSLQDIFTYNTLIDHYSKFGRMDKAENLLEKMTYQNISPDGFTYNSLLEGYCKANRLE 176
KNG D+ TY +I K + D A M ++ SPD +++ G C +++
Sbjct: 142 KNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGAIVVGLCDGRKVD 201
Query: 175 KAYSLLTGKM 146
AY L+ M
Sbjct: 202 LAYELIIDVM 211
Score = 35.0 bits (79), Expect(2) = 3e-06
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = -2
Query: 137 CFVSVISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSY 9
C +++YN+ L+ C+ A K+LK M + GI P+V SY
Sbjct: 251 CEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSY 293
>ref|XP_006417164.1| hypothetical protein EUTSA_v10007381mg [Eutrema salsugineum]
gi|557094935|gb|ESQ35517.1| hypothetical protein
EUTSA_v10007381mg [Eutrema salsugineum]
Length = 517
Score = 98.2 bits (243), Expect(2) = 3e-26
Identities = 44/103 (42%), Positives = 65/103 (63%)
Frame = -3
Query: 451 IVFKTAVYNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKAE 272
+ T VYNALI+ FCRAG + KAE L SFM K+G D+ TYN L+++Y + KAE
Sbjct: 216 VKLSTVVYNALISGFCRAGRIEKAEALKSFMSKSGCSPDLVTYNVLLNYYYDHNMLKKAE 275
Query: 271 NLLEKMTYQNISPDGFTYNSLLEGYCKANRLEKAYSLLTGKMD 143
++ +M I PD ++YN LL+ +C+ +K YSL+ +M+
Sbjct: 276 GVMSEMVRSGIQPDAYSYNQLLKRHCRVGVPDKCYSLMVKEME 318
Score = 46.2 bits (108), Expect(2) = 3e-26
Identities = 19/44 (43%), Positives = 29/44 (65%)
Frame = -2
Query: 134 FVSVISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSYTT 3
F V+SY+ +++ C + AYK+ +EM QKGI NVV+YT+
Sbjct: 322 FCDVVSYSTLIETFCRASNTRKAYKLFEEMRQKGIVTNVVTYTS 365
Score = 67.0 bits (162), Expect(2) = 2e-12
Identities = 32/99 (32%), Positives = 54/99 (54%)
Frame = -3
Query: 430 YNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKAENLLEKMT 251
Y+ LI FCRA KA L M + G + ++ TY +LI + + G A+ LL++MT
Sbjct: 328 YSTLIETFCRASNTRKAYKLFEEMRQKGIVTNVVTYTSLIKAFLREGNSSVAKKLLDQMT 387
Query: 250 YQNISPDGFTYNSLLEGYCKANRLEKAYSLLTGKMDASV 134
+SPD Y ++L+ CK+ ++KAY + ++ +
Sbjct: 388 ELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHGI 426
Score = 30.8 bits (68), Expect(2) = 2e-12
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -2
Query: 122 ISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSY 9
ISYN ++ LC R + A K+ K+M K P+ +++
Sbjct: 431 ISYNALISGLCRSCRVTEAMKLFKDMQSKECCPDELTF 468
Score = 69.7 bits (169), Expect = 4e-10
Identities = 36/99 (36%), Positives = 53/99 (53%)
Frame = -3
Query: 457 QGIVFKTAVYNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDK 278
+GIV Y +LI AF R G + A+ L M + G D Y T++DH K G +DK
Sbjct: 354 KGIVTNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDK 413
Query: 277 AENLLEKMTYQNISPDGFTYNSLLEGYCKANRLEKAYSL 161
A + M I+PD +YN+L+ G C++ R+ +A L
Sbjct: 414 AYGVFNDMIEHGITPDAISYNALISGLCRSCRVTEAMKL 452
Score = 44.3 bits (103), Expect(2) = 7e-08
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Frame = -3
Query: 430 YNALIAAFCRAGEVAKA-EILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKAENLLEKM 254
YN L+ CR G K ++ ME G D+ +Y+TLI+ + + KA L E+M
Sbjct: 293 YNQLLKRHCRVGVPDKCYSLMVKEMEPRGFC-DVVSYSTLIETFCRASNTRKAYKLFEEM 351
Query: 253 TYQNISPDGFTYNSLLEGYCKANRLEKAYSLL 158
+ I + TY SL++ + + A LL
Sbjct: 352 RQKGIVTNVVTYTSLIKAFLREGNSSVAKKLL 383
Score = 37.7 bits (86), Expect(2) = 7e-08
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = -2
Query: 122 ISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSY 9
I Y ILD LC G AY V +M + GI+P+ +SY
Sbjct: 396 IFYTTILDHLCKSGNVDKAYGVFNDMIEHGITPDAISY 433
Score = 44.3 bits (103), Expect(2) = 1e-06
Identities = 25/98 (25%), Positives = 46/98 (46%)
Frame = -3
Query: 430 YNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKAENLLEKMT 251
+N + CR EV A M + G D+ +Y LI+ + G++ A +M
Sbjct: 117 FNIYLDLLCREREVGFAVQTFFCMVRRGREPDVVSYTILINGLFRAGKVTDAVEFWNEMI 176
Query: 250 YQNISPDGFTYNSLLEGYCKANRLEKAYSLLTGKMDAS 137
I+PD SL+ G C A +++ AY ++ ++ ++
Sbjct: 177 RSGINPDNKACASLVVGLCDARKVDLAYEMVAEEIKSA 214
Score = 33.5 bits (75), Expect(2) = 1e-06
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -2
Query: 131 VSVISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSY 9
+S + YN ++ C GR A + MS+ G SP++V+Y
Sbjct: 218 LSTVVYNALISGFCRAGRIEKAEALKSFMSKSGCSPDLVTY 258
>gb|EMJ28460.1| hypothetical protein PRUPE_ppa017811mg [Prunus persica]
Length = 541
Score = 94.4 bits (233), Expect(2) = 2e-25
Identities = 42/103 (40%), Positives = 67/103 (65%)
Frame = -3
Query: 451 IVFKTAVYNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKAE 272
+ F +YN LI FCRAG + KA+ + SFM++NG D+ T+N L+ + +++AE
Sbjct: 215 VKFSNLMYNTLINGFCRAGRIDKAQAIKSFMKRNGCESDLVTHNVLLKYCCNEFMLEEAE 274
Query: 271 NLLEKMTYQNISPDGFTYNSLLEGYCKANRLEKAYSLLTGKMD 143
L++KM + PD ++YN LL+G C+ANR +KAY L+ +M+
Sbjct: 275 KLMKKMERSGMEPDVYSYNQLLKGLCQANRADKAYLLMRTRME 317
Score = 47.4 bits (111), Expect(2) = 2e-25
Identities = 20/41 (48%), Positives = 29/41 (70%)
Frame = -2
Query: 128 SVISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSYT 6
+V+SYN I+ A C R+ AYK+ +EM QKG P+VV++T
Sbjct: 323 NVVSYNTIITAFCRAHRTGRAYKLFEEMGQKGTMPDVVTFT 363
Score = 69.3 bits (168), Expect(2) = 2e-13
Identities = 31/99 (31%), Positives = 56/99 (56%)
Frame = -3
Query: 430 YNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKAENLLEKMT 251
YN +I AFCRA +A L M + G++ D+ T+ LI+ + + G D A LL++MT
Sbjct: 327 YNTIITAFCRAHRTGRAYKLFEEMGQKGTMPDVVTFTILIEAFLREGSSDIANKLLDQMT 386
Query: 250 YQNISPDGFTYNSLLEGYCKANRLEKAYSLLTGKMDASV 134
+ PD Y ++++ CK+ ++ AYS+ + ++ +
Sbjct: 387 VMGLLPDRIFYTTIVDHLCKSGKIAMAYSVFSDMLEKGI 425
Score = 32.0 bits (71), Expect(2) = 2e-13
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = -2
Query: 122 ISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSY 9
+S+N +++ LC R S A + +EM +G P+ V++
Sbjct: 430 VSFNALINGLCKASRVSEAMHLYEEMQNRGCCPDEVTF 467
Score = 47.4 bits (111), Expect(2) = 7e-08
Identities = 26/99 (26%), Positives = 44/99 (44%)
Frame = -3
Query: 430 YNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKAENLLEKMT 251
+N + C+ A + M G D+ +Y LID K + DKA ++ M
Sbjct: 117 FNIYLNLLCQENRAHFALEVFHRMVDKGREPDVVSYTILIDGLCKARQFDKAVDIWTSMI 176
Query: 250 YQNISPDGFTYNSLLEGYCKANRLEKAYSLLTGKMDASV 134
+ PD +L+ G C +++ AY+L+ G+M V
Sbjct: 177 RKGFKPDNIACTALVVGLCDGGKVDLAYNLVIGEMKGQV 215
Score = 34.7 bits (78), Expect(2) = 7e-08
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = -2
Query: 137 CFVSVISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSY 9
C ++++N++L CN A K++K+M + G+ P+V SY
Sbjct: 250 CESDLVTHNVLLKYCCNEFMLEEAEKLMKKMERSGMEPDVYSY 292
Score = 61.2 bits (147), Expect = 1e-07
Identities = 33/99 (33%), Positives = 51/99 (51%)
Frame = -3
Query: 457 QGIVFKTAVYNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDK 278
+G + + LI AF R G A L M G L D Y T++DH K G++
Sbjct: 353 KGTMPDVVTFTILIEAFLREGSSDIANKLLDQMTVMGLLPDRIFYTTIVDHLCKSGKIAM 412
Query: 277 AENLLEKMTYQNISPDGFTYNSLLEGYCKANRLEKAYSL 161
A ++ M + I+PD ++N+L+ G CKA+R+ +A L
Sbjct: 413 AYSVFSDMLEKGIAPDAVSFNALINGLCKASRVSEAMHL 451
>ref|XP_002312667.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222852487|gb|EEE90034.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 512
Score = 90.5 bits (223), Expect(2) = 4e-25
Identities = 44/98 (44%), Positives = 61/98 (62%)
Frame = -3
Query: 439 TAVYNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKAENLLE 260
T VYNALI+ FCRAG + KA + SFM + G D+ TYN L+++ ++A LL+
Sbjct: 220 TLVYNALISGFCRAGRIDKALAMVSFMSRTGCKPDLVTYNVLLNYCCNEFMFEEAVKLLK 279
Query: 259 KMTYQNISPDGFTYNSLLEGYCKANRLEKAYSLLTGKM 146
KM I PD ++YN LL+ +CKAN +KAY + KM
Sbjct: 280 KMECSAIEPDVYSYNQLLKAHCKANHPDKAYLFMVTKM 317
Score = 50.1 bits (118), Expect(2) = 4e-25
Identities = 20/43 (46%), Positives = 32/43 (74%)
Frame = -2
Query: 134 FVSVISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSYT 6
F V+SYN I+ A C++ + AYK+ +EM +KGI+P+VV++T
Sbjct: 322 FCDVVSYNTIIKAFCSISNNRRAYKLFEEMGRKGIAPDVVTFT 364
Score = 59.3 bits (142), Expect(2) = 9e-10
Identities = 28/99 (28%), Positives = 51/99 (51%)
Frame = -3
Query: 430 YNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKAENLLEKMT 251
YN +I AFC +A L M + G D+ T+ LI + + G D A+ LL+ M
Sbjct: 328 YNTIIKAFCSISNNRRAYKLFEEMGRKGIAPDVVTFTILIKAFLREGNSDMAKKLLDLMA 387
Query: 250 YQNISPDGFTYNSLLEGYCKANRLEKAYSLLTGKMDASV 134
+ PD Y ++++ +CK+ ++E A+S+ ++ +
Sbjct: 388 GMGLLPDRIFYTTIIDHHCKSGKVEMAHSIFCDMVEKGI 426
Score = 29.3 bits (64), Expect(2) = 9e-10
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -2
Query: 125 VISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSY 9
V+SYN +++ C R + ++M Q+G P+ V+Y
Sbjct: 430 VVSYNALINGFCKSLRVGEVMHLYEQMLQRGSFPDEVTY 468
Score = 65.1 bits (157), Expect = 9e-09
Identities = 34/99 (34%), Positives = 53/99 (53%)
Frame = -3
Query: 457 QGIVFKTAVYNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDK 278
+GI + LI AF R G A+ L M G L D Y T+IDH+ K G+++
Sbjct: 354 KGIAPDVVTFTILIKAFLREGNSDMAKKLLDLMAGMGLLPDRIFYTTIIDHHCKSGKVEM 413
Query: 277 AENLLEKMTYQNISPDGFTYNSLLEGYCKANRLEKAYSL 161
A ++ M + I+PD +YN+L+ G+CK+ R+ + L
Sbjct: 414 AHSIFCDMVEKGITPDVVSYNALINGFCKSLRVGEVMHL 452
Score = 45.4 bits (106), Expect(2) = 7e-08
Identities = 25/91 (27%), Positives = 42/91 (46%)
Frame = -3
Query: 430 YNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKAENLLEKMT 251
YN L+ A C+A KA + D+ +YNT+I + +A L E+M
Sbjct: 293 YNQLLKAHCKANHPDKAYLFMVTKMVPKGFCDVVSYNTIIKAFCSISNNRRAYKLFEEMG 352
Query: 250 YQNISPDGFTYNSLLEGYCKANRLEKAYSLL 158
+ I+PD T+ L++ + + + A LL
Sbjct: 353 RKGIAPDVVTFTILIKAFLREGNSDMAKKLL 383
Score = 36.6 bits (83), Expect(2) = 7e-08
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = -2
Query: 122 ISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSY 9
I Y I+D C G+ A+ + +M +KGI+P+VVSY
Sbjct: 396 IFYTTIIDHHCKSGKVEMAHSIFCDMVEKGITPDVVSY 433
Score = 44.7 bits (104), Expect(2) = 7e-07
Identities = 23/107 (21%), Positives = 46/107 (42%)
Frame = -3
Query: 454 GIVFKTAVYNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKA 275
G + Y+ I+ C+ E + L MEK + DI+ +N ++ + R + A
Sbjct: 74 GFSLSSFTYSRFISGLCQTKEFTFIDNLLKDMEKLHCVPDIWAFNIYLNLLFRENREESA 133
Query: 274 ENLLEKMTYQNISPDGFTYNSLLEGYCKANRLEKAYSLLTGKMDASV 134
+ +M + PD T+ +++G CK + + A +D +
Sbjct: 134 LEVFGRMVERGREPDVVTFTIIIDGLCKMKKFDAAVQFWLNMLDKGI 180
Score = 33.9 bits (76), Expect(2) = 7e-07
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -2
Query: 131 VSVISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSY 9
VS + YN ++ C GR A ++ MS+ G P++V+Y
Sbjct: 218 VSTLVYNALISGFCRAGRIDKALAMVSFMSRTGCKPDLVTY 258
>gb|EOY00680.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
cacao] gi|508708784|gb|EOY00681.1| Pentatricopeptide
repeat superfamily protein isoform 1 [Theobroma cacao]
gi|508708785|gb|EOY00682.1| Pentatricopeptide repeat
superfamily protein isoform 1 [Theobroma cacao]
gi|508708786|gb|EOY00683.1| Pentatricopeptide repeat
superfamily protein isoform 1 [Theobroma cacao]
Length = 516
Score = 93.2 bits (230), Expect(2) = 1e-24
Identities = 45/110 (40%), Positives = 68/110 (61%)
Frame = -3
Query: 460 GQGIVFKTAVYNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMD 281
G I F T +YNALI+ FCR + KA+ + FM KNG D+ TYN L+++ ++
Sbjct: 213 GGDIEFSTLLYNALISGFCRIRRIDKAQAIKLFMTKNGCEPDLVTYNVLLNYCCNELMLE 272
Query: 280 KAENLLEKMTYQNISPDGFTYNSLLEGYCKANRLEKAYSLLTGKMDASVL 131
+A L++KM I PD + YN +++G+C ANR +KA L+ KM+A+ L
Sbjct: 273 EAAKLVKKMERSGIGPDVYGYNQMIKGFCNANRPDKALLLMVNKMEANGL 322
Score = 45.4 bits (106), Expect(2) = 1e-24
Identities = 19/40 (47%), Positives = 29/40 (72%)
Frame = -2
Query: 122 ISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSYTT 3
+S+N I+ A C G AYK+ +EM +KGI+P+VV++TT
Sbjct: 326 VSHNTIIKAFCKGGHIGKAYKLFEEMGRKGIAPDVVTFTT 365
Score = 52.4 bits (124), Expect(2) = 3e-10
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Frame = -3
Query: 430 YNALIAAFCRAGEVAKAEIL-ASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKAENLLEKM 254
YN +I FC A KA +L + ME NG L D ++NT+I + K G + KA L E+M
Sbjct: 293 YNQMIKGFCNANRPDKALLLMVNKMEANG-LADAVSHNTIIKAFCKGGHIGKAYKLFEEM 351
Query: 253 TYQNISPDGFTYNSLLEGYCKANRLEKAYSLL 158
+ I+PD T+ +L++ + A +LL
Sbjct: 352 GRKGIAPDVVTFTTLIKACLTEGSSDIAKALL 383
Score = 37.7 bits (86), Expect(2) = 3e-10
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = -2
Query: 122 ISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSY 9
I Y I+D LC G+ A+ V +M ++G++P+VVSY
Sbjct: 396 IFYTAIIDHLCKNGKVEMAHSVFDDMIKQGVNPDVVSY 433
Score = 64.3 bits (155), Expect = 2e-08
Identities = 33/99 (33%), Positives = 51/99 (51%)
Frame = -3
Query: 457 QGIVFKTAVYNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDK 278
+GI + LI A G A+ L M G L D Y +IDH K G+++
Sbjct: 354 KGIAPDVVTFTTLIKACLTEGSSDIAKALLDRMSGMGLLPDCIFYTAIIDHLCKNGKVEM 413
Query: 277 AENLLEKMTYQNISPDGFTYNSLLEGYCKANRLEKAYSL 161
A ++ + M Q ++PD +YN+L+ G+CK+NR +A L
Sbjct: 414 AHSVFDDMIKQGVNPDVVSYNALINGFCKSNRASEAIHL 452
Score = 45.8 bits (107), Expect(2) = 7e-08
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 5/106 (4%)
Frame = -3
Query: 430 YNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKAENLLEKMT 251
+N + CR ++ A + + K G D+ TY +ID K G+ D A +M
Sbjct: 117 FNIYLNLLCREKKIELALEVFHSLVKKGRDPDVVTYTIMIDGLCKAGKFDNAVGFWREMV 176
Query: 250 YQNISPDGFTYNSLLEGYCKANRLEKAYSLLT-----GKMDASVLL 128
+ PD +L+ G C +++ AY L+ G ++ S LL
Sbjct: 177 GKGFRPDNKACCALVVGLCDGGKVDLAYELVVEVIKGGDIEFSTLL 222
Score = 36.2 bits (82), Expect(2) = 7e-08
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = -2
Query: 137 CFVSVISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSY 9
C +++YN++L+ CN A K++K+M + GI P+V Y
Sbjct: 251 CEPDLVTYNVLLNYCCNELMLEEAAKLVKKMERSGIGPDVYGY 293
Score = 58.2 bits (139), Expect = 1e-06
Identities = 33/111 (29%), Positives = 54/111 (48%)
Frame = -3
Query: 460 GQGIVFKTAVYNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMD 281
G G++ Y A+I C+ G+V A + M K G D+ +YN LI+ + K R
Sbjct: 388 GMGLLPDCIFYTAIIDHLCKNGKVEMAHSVFDDMIKQGVNPDVVSYNALINGFCKSNRAS 447
Query: 280 KAENLLEKMTYQNISPDGFTYNSLLEGYCKANRLEKAYSLLTGKMDASVLL 128
+A +L E+M + SPD T+ ++ G + +L KA + M+ L
Sbjct: 448 EAIHLYEEMQTRGFSPDEVTFKLIIGGLIREKKLSKACKVWDQMMEKGFTL 498
>gb|EXB82495.1| hypothetical protein L484_027670 [Morus notabilis]
Length = 513
Score = 90.1 bits (222), Expect(2) = 3e-24
Identities = 40/107 (37%), Positives = 67/107 (62%)
Frame = -3
Query: 451 IVFKTAVYNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKAE 272
+ F +YN+LI+ FCRAG + KA+++ FM+++G D+ TYN L+ + +D+A
Sbjct: 215 VKFNNLIYNSLISGFCRAGRIDKAQVIKDFMKRDGCEPDLVTYNVLLIYCCDKLMLDEAN 274
Query: 271 NLLEKMTYQNISPDGFTYNSLLEGYCKANRLEKAYSLLTGKMDASVL 131
L+ M + PD ++YN LL+G C+A+R +KAY L+ M++ L
Sbjct: 275 KLINTMERIGMKPDSYSYNKLLKGLCRAHRPDKAYLLMVDSMESKGL 321
Score = 47.4 bits (111), Expect(2) = 3e-24
Identities = 21/41 (51%), Positives = 30/41 (73%)
Frame = -2
Query: 128 SVISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSYT 6
+V+SYN I+ A C L R AY++ +EM QKGI P+VV++T
Sbjct: 323 NVVSYNTIIGAFCKLLRVRRAYQLFEEMRQKGIEPDVVTFT 363
Score = 60.1 bits (144), Expect(2) = 6e-12
Identities = 30/99 (30%), Positives = 52/99 (52%)
Frame = -3
Query: 430 YNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKAENLLEKMT 251
YN +I AFC+ V +A L M + G D+ T+ LI + G D A+ LL++MT
Sbjct: 327 YNTIIGAFCKLLRVRRAYQLFEEMRQKGIEPDVVTFTILIKAFLSVGSSDVAKRLLDQMT 386
Query: 250 YQNISPDGFTYNSLLEGYCKANRLEKAYSLLTGKMDASV 134
+ PD Y +++ CKA ++ A+S+ + ++ +
Sbjct: 387 GMGLLPDCLFYTIIVDHLCKAGKIGMAHSVFSDMVERGI 425
Score = 35.8 bits (81), Expect(2) = 6e-12
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = -2
Query: 125 VISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSY 9
VISYN I++ LC R S A + +EM +G+ P+ V++
Sbjct: 429 VISYNAIINGLCKAFRVSEAVHLYEEMQARGLCPDEVTF 467
Score = 50.8 bits (120), Expect(2) = 1e-10
Identities = 28/91 (30%), Positives = 46/91 (50%)
Frame = -3
Query: 430 YNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKAENLLEKMT 251
YN L+ CRA KA +L ++ L ++ +YNT+I + K R+ +A L E+M
Sbjct: 292 YNKLLKGLCRAHRPDKAYLLMVDSMESKGLANVVSYNTIIGAFCKLLRVRRAYQLFEEMR 351
Query: 250 YQNISPDGFTYNSLLEGYCKANRLEKAYSLL 158
+ I PD T+ L++ + + A LL
Sbjct: 352 QKGIEPDVVTFTILIKAFLSVGSSDVAKRLL 382
Score = 40.4 bits (93), Expect(2) = 1e-10
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = -2
Query: 116 YNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSY 9
Y II+D LC G+ A+ V +M ++GI+P+V+SY
Sbjct: 397 YTIIVDHLCKAGKIGMAHSVFSDMVERGITPDVISY 432
Score = 59.3 bits (142), Expect = 5e-07
Identities = 32/99 (32%), Positives = 49/99 (49%)
Frame = -3
Query: 457 QGIVFKTAVYNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDK 278
+GI + LI AF G A+ L M G L D Y ++DH K G++
Sbjct: 353 KGIEPDVVTFTILIKAFLSVGSSDVAKRLLDQMTGMGLLPDCLFYTIIVDHLCKAGKIGM 412
Query: 277 AENLLEKMTYQNISPDGFTYNSLLEGYCKANRLEKAYSL 161
A ++ M + I+PD +YN+++ G CKA R+ +A L
Sbjct: 413 AHSVFSDMVERGITPDVISYNAIINGLCKAFRVSEAVHL 451
Score = 57.0 bits (136), Expect = 3e-06
Identities = 33/126 (26%), Positives = 62/126 (49%)
Frame = -3
Query: 460 GQGIVFKTAVYNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMD 281
G G++ Y ++ C+AG++ A + S M + G D+ +YN +I+ K R+
Sbjct: 387 GMGLLPDCLFYTIIVDHLCKAGKIGMAHSVFSDMVERGITPDVISYNAIINGLCKAFRVS 446
Query: 280 KAENLLEKMTYQNISPDGFTYNSLLEGYCKANRLEKAYSLLTGKMDASVLLALYPTI*SL 101
+A +L E+M + + PD T+ ++ G K N+L A + M+ L P +
Sbjct: 447 EAVHLYEEMQARGLCPDEVTFKLIIGGLIKENKLPLACRVWDQMMEKG--FTLEPALSET 504
Query: 100 TLSAIS 83
++AI+
Sbjct: 505 LINAIN 510
>gb|EPS65318.1| hypothetical protein M569_09460 [Genlisea aurea]
Length = 519
Score = 94.4 bits (233), Expect(2) = 1e-23
Identities = 42/102 (41%), Positives = 65/102 (63%)
Frame = -3
Query: 445 FKTAVYNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKAENL 266
F +VYN L+ FCR+G + KA + FM++NG D+ T+N L+ H +D+A L
Sbjct: 220 FDASVYNVLVDGFCRSGRIDKALAIKDFMKRNGRQPDLITHNVLLRHCCDSRMVDEARKL 279
Query: 265 LEKMTYQNISPDGFTYNSLLEGYCKANRLEKAYSLLTGKMDA 140
+ KM + PD F+YN+LL+G C++ R+++AY LL +MDA
Sbjct: 280 MAKMEKGGMKPDAFSYNALLKGLCRSRRVDRAYKLLITEMDA 321
Score = 41.2 bits (95), Expect(2) = 1e-23
Identities = 15/40 (37%), Positives = 28/40 (70%)
Frame = -2
Query: 128 SVISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSY 9
+V+SYN ++D+ C G + AY++ M+ KGI+P+ V++
Sbjct: 326 NVVSYNTVIDSFCKAGDNERAYRLFGYMATKGIAPDAVTF 365
Score = 58.5 bits (140), Expect = 9e-07
Identities = 39/110 (35%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
Frame = -3
Query: 430 YNALIAAFCRAGEVAKA-EILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKAENLLEKM 254
YNAL+ CR+ V +A ++L + M+ G + ++ +YNT+ID + K G ++A L M
Sbjct: 295 YNALLKGLCRSRRVDRAYKLLITEMDAKG-VANVVSYNTVIDSFCKAGDNERAYRLFGYM 353
Query: 253 TYQNISPDGFTYNSLLEGYCKANRLEKAYSLL--TGKMDASVLLALYPTI 110
+ I+PD T+ L+ G+ KA A SLL G M+ S L L+ I
Sbjct: 354 ATKGIAPDAVTFAVLITGFLKAGDSAAAESLLDEMGGMNLSPGLELHTAI 403
Score = 56.6 bits (135), Expect = 3e-06
Identities = 30/93 (32%), Positives = 49/93 (52%)
Frame = -3
Query: 430 YNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKAENLLEKMT 251
YN +I +FC+AG+ +A L +M G D T+ LI + K G AE+LL++M
Sbjct: 330 YNTVIDSFCKAGDNERAYRLFGYMATKGIAPDAVTFAVLITGFLKAGDSAAAESLLDEMG 389
Query: 250 YQNISPDGFTYNSLLEGYCKANRLEKAYSLLTG 152
N+SP + ++++ CK+ R+ A G
Sbjct: 390 GMNLSPGLELHTAIVDSLCKSGRMGAAREAFDG 422
>gb|ESW31683.1| hypothetical protein PHAVU_002G258900g [Phaseolus vulgaris]
Length = 518
Score = 94.4 bits (233), Expect(2) = 4e-23
Identities = 44/103 (42%), Positives = 66/103 (64%)
Frame = -3
Query: 454 GIVFKTAVYNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKA 275
G+ VYNALI FCR G V KA + +FM +NG + D+ TYNTL+++ G +D+A
Sbjct: 217 GVKVNILVYNALIDGFCRMGRVDKAMKIKAFMSRNGCVPDLVTYNTLLNYCCDEGMLDEA 276
Query: 274 ENLLEKMTYQNISPDGFTYNSLLEGYCKANRLEKAYSLLTGKM 146
L+E M + PD ++YN LL+ +CKAN +++AY +L +M
Sbjct: 277 LRLVETMERSGVEPDFYSYNELLKCFCKANMVDRAYLMLVERM 319
Score = 39.3 bits (90), Expect(2) = 4e-23
Identities = 15/39 (38%), Positives = 27/39 (69%)
Frame = -2
Query: 125 VISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSY 9
V+SYN ++ A C + R+ Y++ +EM KGI P++V++
Sbjct: 327 VVSYNTLITAFCKVRRTRRGYELFEEMCGKGIRPDMVTF 365
Score = 53.5 bits (127), Expect(2) = 6e-11
Identities = 27/91 (29%), Positives = 47/91 (51%)
Frame = -3
Query: 430 YNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKAENLLEKMT 251
YN L+ FC+A V +A ++ + + D+ +YNTLI + K R + L E+M
Sbjct: 295 YNELLKCFCKANMVDRAYLMLVERMQTKGMCDVVSYNTLITAFCKVRRTRRGYELFEEMC 354
Query: 250 YQNISPDGFTYNSLLEGYCKANRLEKAYSLL 158
+ I PD T+N L++ + + ++ LL
Sbjct: 355 GKGIRPDMVTFNILIDAFLREGSIQVVKKLL 385
Score = 38.9 bits (89), Expect(2) = 6e-11
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = -2
Query: 122 ISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSY 9
I Y ++D LC G+ TA V ++M + G++P+V+SY
Sbjct: 398 IFYTAVVDHLCKTGKVDTADSVFRDMVENGVNPDVISY 435
Score = 70.5 bits (171), Expect = 2e-10
Identities = 35/100 (35%), Positives = 55/100 (55%)
Frame = -3
Query: 460 GQGIVFKTAVYNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMD 281
G+GI +N LI AF R G + + L M + G L D Y ++DH K G++D
Sbjct: 355 GKGIRPDMVTFNILIDAFLREGSIQVVKKLLDEMTRLGILPDRIFYTAVVDHLCKTGKVD 414
Query: 280 KAENLLEKMTYQNISPDGFTYNSLLEGYCKANRLEKAYSL 161
A+++ M ++PD +YN+L+ G+CKA+R+ A L
Sbjct: 415 TADSVFRDMVENGVNPDVISYNALVNGFCKASRVMDAMRL 454
Score = 49.3 bits (116), Expect(2) = 4e-10
Identities = 29/107 (27%), Positives = 48/107 (44%)
Frame = -3
Query: 454 GIVFKTAVYNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKA 275
G V +N ++ CR + A L M G D+ +Y ++D K R D+A
Sbjct: 112 GFVPDIWAFNTYLSFLCRHNRLETALELFHSMPSEGREPDVVSYTIIVDALCKAQRYDEA 171
Query: 274 ENLLEKMTYQNISPDGFTYNSLLEGYCKANRLEKAYSLLTGKMDASV 134
+ +T + +SPD +L+ G C R++ AY L+ G + V
Sbjct: 172 ARVWRGLTGKGLSPDFKACVALVVGLCGGGRVDLAYELVVGVIKGGV 218
Score = 40.4 bits (93), Expect(2) = 4e-10
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = -2
Query: 131 VSVISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSYTT 3
V+++ YN ++D C +GR A K+ MS+ G P++V+Y T
Sbjct: 220 VNILVYNALIDGFCRMGRVDKAMKIKAFMSRNGCVPDLVTYNT 262
Score = 55.8 bits (133), Expect(2) = 6e-08
Identities = 35/96 (36%), Positives = 47/96 (48%)
Frame = -3
Query: 445 FKTAVYNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKAENL 266
FK V AL+ C G V A L + K G +I YN LID + + GR+DKA +
Sbjct: 187 FKACV--ALVVGLCGGGRVDLAYELVVGVIKGGVKVNILVYNALIDGFCRMGRVDKAMKI 244
Query: 265 LEKMTYQNISPDGFTYNSLLEGYCKANRLEKAYSLL 158
M+ PD TYN+LL C L++A L+
Sbjct: 245 KAFMSRNGCVPDLVTYNTLLNYCCDEGMLDEALRLV 280
Score = 26.6 bits (57), Expect(2) = 6e-08
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -2
Query: 119 SYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSYTT 3
SYN +L C AY +L E Q +VVSY T
Sbjct: 294 SYNELLKCFCKANMVDRAYLMLVERMQTKGMCDVVSYNT 332
>ref|XP_006304861.1| hypothetical protein CARUB_v10012598mg [Capsella rubella]
gi|482573572|gb|EOA37759.1| hypothetical protein
CARUB_v10012598mg [Capsella rubella]
Length = 517
Score = 87.0 bits (214), Expect(2) = 7e-23
Identities = 39/103 (37%), Positives = 63/103 (61%)
Frame = -3
Query: 451 IVFKTAVYNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKAE 272
+ T VYNALI+ FC+AG + KAE L SFM K D+ TYN L+++Y + + KAE
Sbjct: 216 VKLSTVVYNALISGFCKAGRIEKAEALKSFMNKIECEPDLVTYNVLLNYYYENNLLKKAE 275
Query: 271 NLLEKMTYQNISPDGFTYNSLLEGYCKANRLEKAYSLLTGKMD 143
++ +M + D ++YN LL+ +C+ + +K YS + +M+
Sbjct: 276 GVMTEMVRSGVELDAYSYNQLLKRHCRVSHPDKCYSFMVKEME 318
Score = 45.8 bits (107), Expect(2) = 7e-23
Identities = 19/44 (43%), Positives = 29/44 (65%)
Frame = -2
Query: 134 FVSVISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSYTT 3
F V+SY+ +++ C + AYK+ +EM QKGI NVV+YT+
Sbjct: 322 FCDVVSYSTLIETYCRASNTRKAYKLFEEMRQKGIVTNVVTYTS 365
Score = 66.2 bits (160), Expect(2) = 2e-11
Identities = 31/96 (32%), Positives = 54/96 (56%)
Frame = -3
Query: 430 YNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKAENLLEKMT 251
Y+ LI +CRA KA L M + G + ++ TY +LI + + G+ A+ LL++MT
Sbjct: 328 YSTLIETYCRASNTRKAYKLFEEMRQKGIVTNVVTYTSLIKAFLREGKSSVAKKLLDQMT 387
Query: 250 YQNISPDGFTYNSLLEGYCKANRLEKAYSLLTGKMD 143
+SPD Y ++L CK+ ++KAY + + ++
Sbjct: 388 ELGLSPDRIFYTTILNHLCKSGNIDKAYGVFSDMIE 423
Score = 28.1 bits (61), Expect(2) = 2e-11
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = -2
Query: 122 ISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSY 9
ISYN ++ LC R + A K+ ++M K P+ +++
Sbjct: 431 ISYNSLICGLCRACRVTEAIKLFEDMQSKECCPDELTF 468
Score = 68.9 bits (167), Expect = 6e-10
Identities = 37/99 (37%), Positives = 54/99 (54%)
Frame = -3
Query: 457 QGIVFKTAVYNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDK 278
+GIV Y +LI AF R G+ + A+ L M + G D Y T+++H K G +DK
Sbjct: 354 KGIVTNVVTYTSLIKAFLREGKSSVAKKLLDQMTELGLSPDRIFYTTILNHLCKSGNIDK 413
Query: 277 AENLLEKMTYQNISPDGFTYNSLLEGYCKANRLEKAYSL 161
A + M I+PD +YNSL+ G C+A R+ +A L
Sbjct: 414 AYGVFSDMIEHRITPDAISYNSLICGLCRACRVTEAIKL 452
Score = 52.4 bits (124), Expect(2) = 1e-06
Identities = 36/103 (34%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Frame = -3
Query: 424 ALIAAFCRAGEVAKA-EILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKAENLLEKMTY 248
AL+ C A +V A E++A ++ YN LI + K GR++KAE L M
Sbjct: 189 ALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSFMNK 248
Query: 247 QNISPDGFTYNSLLEGYCKANRLEKAYSLLTGKMDASVLLALY 119
PD TYN LL Y + N L+KA ++T + + V L Y
Sbjct: 249 IECEPDLVTYNVLLNYYYENNLLKKAEGVMTEMVRSGVELDAY 291
Score = 45.1 bits (105), Expect(2) = 1e-06
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = -3
Query: 454 GIVFKTAVYNALIAAFCRAGEVAKA-EILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDK 278
G+ YN L+ CR K + ME G D+ +Y+TLI+ Y + K
Sbjct: 285 GVELDAYSYNQLLKRHCRVSHPDKCYSFMVKEMEPRGFC-DVVSYSTLIETYCRASNTRK 343
Query: 277 AENLLEKMTYQNISPDGFTYNSLLEGYCKANRLEKAYSLL 158
A L E+M + I + TY SL++ + + + A LL
Sbjct: 344 AYKLFEEMRQKGIVTNVVTYTSLIKAFLREGKSSVAKKLL 383
Score = 33.1 bits (74), Expect(2) = 1e-06
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -2
Query: 122 ISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSYTT 3
I Y IL+ LC G AY V +M + I+P+ +SY +
Sbjct: 396 IFYTTILNHLCKSGNIDKAYGVFSDMIEHRITPDAISYNS 435
Score = 25.8 bits (55), Expect(2) = 1e-06
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -2
Query: 119 SYNIILDALCNLGRSSTAYK-VLKEMSQKGISPNVVSYTT 3
SYN +L C + Y ++KEM +G +VVSY+T
Sbjct: 292 SYNQLLKRHCRVSHPDKCYSFMVKEMEPRGFC-DVVSYST 330
>ref|XP_004504137.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Cicer arietinum]
Length = 516
Score = 90.5 bits (223), Expect(2) = 7e-23
Identities = 40/103 (38%), Positives = 64/103 (62%)
Frame = -3
Query: 454 GIVFKTAVYNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKA 275
G+ VYNALI+ FCR G + KA + FM +NG + D+ TYN L+++ +D+
Sbjct: 215 GVKVNCLVYNALISGFCRMGRIDKALAIKGFMSRNGCVPDLVTYNILLNYCCDEVMLDEV 274
Query: 274 ENLLEKMTYQNISPDGFTYNSLLEGYCKANRLEKAYSLLTGKM 146
L+E M + PD ++YN LL+G+CKAN++++AY + +M
Sbjct: 275 VKLVESMERSGVEPDLYSYNELLKGFCKANQVDRAYLTMVKRM 317
Score = 42.4 bits (98), Expect(2) = 7e-23
Identities = 17/40 (42%), Positives = 27/40 (67%)
Frame = -2
Query: 125 VISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSYT 6
V+SYN I+ A C R Y++ +EM +KGI P+V+++T
Sbjct: 325 VVSYNTIIAAFCKARRIERGYELFEEMRRKGIQPDVITFT 364
Score = 64.3 bits (155), Expect(2) = 6e-12
Identities = 32/99 (32%), Positives = 55/99 (55%)
Frame = -3
Query: 430 YNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKAENLLEKMT 251
YN +IAAFC+A + + L M + G D+ T+ LI+ + K G D A+ LL++MT
Sbjct: 328 YNTIIAAFCKARRIERGYELFEEMRRKGIQPDVITFTVLIEAFFKEGGSDVAKKLLDQMT 387
Query: 250 YQNISPDGFTYNSLLEGYCKANRLEKAYSLLTGKMDASV 134
I PD Y ++++ CKA +++ A+ + ++ V
Sbjct: 388 TMGIVPDLIFYTTIVDRLCKAWKVDIAHGVFCDMVENGV 426
Score = 31.6 bits (70), Expect(2) = 6e-12
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -2
Query: 125 VISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSY 9
V+SYN +++ C R A + EM KG+ P+ V++
Sbjct: 430 VVSYNALINGFCKASRVMDAMCLYDEMQDKGLYPDGVTF 468
Score = 47.4 bits (111), Expect(2) = 4e-07
Identities = 26/107 (24%), Positives = 48/107 (44%)
Frame = -3
Query: 454 GIVFKTAVYNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKA 275
G V +N + CR ++ A L M G D+ +YN +++ K R+D+
Sbjct: 110 GFVPDIWAFNIYLNLLCRENQLETALQLFRTMPLKGREPDVVSYNIIVNALCKAKRVDEV 169
Query: 274 ENLLEKMTYQNISPDGFTYNSLLEGYCKANRLEKAYSLLTGKMDASV 134
+ + + + PD +L+ G C A ++ AY L+ G ++ V
Sbjct: 170 ARVWRSLIEKGLKPDFKVCAALVVGLCSAGNVDLAYELIVGVINGGV 216
Score = 32.0 bits (71), Expect(2) = 4e-07
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -2
Query: 131 VSVISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSY 9
V+ + YN ++ C +GR A + MS+ G P++V+Y
Sbjct: 218 VNCLVYNALISGFCRMGRIDKALAIKGFMSRNGCVPDLVTY 258
Score = 56.6 bits (135), Expect = 3e-06
Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 2/121 (1%)
Frame = -3
Query: 430 YNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKAENLLEKMT 251
YN L+ FC+A +V +A + + + D+ +YNT+I + K R+++ L E+M
Sbjct: 293 YNELLKGFCKANQVDRAYLTMVKRMQTKGMCDVVSYNTIIAAFCKARRIERGYELFEEMR 352
Query: 250 YQNISPDGFTYNSLLEGYCKANRLEKAYSLLTGKMDASVL--LALYPTI*SLTLSAISVE 77
+ I PD T+ L+E + K + A LL ++ L Y TI A V+
Sbjct: 353 RKGIQPDVITFTVLIEAFFKEGGSDVAKKLLDQMTTMGIVPDLIFYTTIVDRLCKAWKVD 412
Query: 76 V 74
+
Sbjct: 413 I 413
>ref|XP_004310156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 516
Score = 85.9 bits (211), Expect(2) = 2e-22
Identities = 39/104 (37%), Positives = 63/104 (60%)
Frame = -3
Query: 454 GIVFKTAVYNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKA 275
G+ F +YNALI+ FCRA + KA+ + FM++NG D+ T+N L+++ +++A
Sbjct: 215 GVEFNNLIYNALISGFCRARRIDKAQAIKLFMKRNGCKPDLVTHNVLLNYCCNEFMLEEA 274
Query: 274 ENLLEKMTYQNISPDGFTYNSLLEGYCKANRLEKAYSLLTGKMD 143
E L+ +M + D ++YN L+G CK NR EKAY + M+
Sbjct: 275 EKLMRQMEKIGMKLDAYSYNGFLKGLCKDNRPEKAYLFMKNMME 318
Score = 45.4 bits (106), Expect(2) = 2e-22
Identities = 20/41 (48%), Positives = 31/41 (75%)
Frame = -2
Query: 128 SVISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSYT 6
+V+S+N I+ A C G++ AYK+ +EM QKGI P+VV++T
Sbjct: 324 NVVSFNTIIMACCKGGQTRRAYKLFQEMFQKGILPDVVTFT 364
Score = 56.6 bits (135), Expect = 3e-06
Identities = 33/99 (33%), Positives = 50/99 (50%)
Frame = -3
Query: 457 QGIVFKTAVYNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDK 278
+GI+ + LI AF R G A+ L M L D Y T+IDH K G++
Sbjct: 354 KGILPDVVTFTILIGAFLREGSSDVAKKLLDQMTGMDLLPDRIFYTTIIDHLCKSGKIAM 413
Query: 277 AENLLEKMTYQNISPDGFTYNSLLEGYCKANRLEKAYSL 161
A ++ M + I+ D YN+L+ G C+A+R+ +A L
Sbjct: 414 ACDMFNDMLEKGITADVVLYNALISGLCRASRVTEAMHL 452
>ref|XP_003531325.2| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like isoform X1 [Glycine max]
gi|571471241|ref|XP_006585252.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like isoform X2 [Glycine max]
Length = 521
Score = 91.7 bits (226), Expect(2) = 3e-22
Identities = 41/103 (39%), Positives = 67/103 (65%)
Frame = -3
Query: 454 GIVFKTAVYNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKA 275
G+ + VYNALI FCR G V KA + +FM + G + D+ TYN L+++ + G +D+A
Sbjct: 219 GVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEA 278
Query: 274 ENLLEKMTYQNISPDGFTYNSLLEGYCKANRLEKAYSLLTGKM 146
L+E M + PD ++YN LL+G+CKAN +++A+ ++ +M
Sbjct: 279 VRLVETMERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERM 321
Score = 38.9 bits (89), Expect(2) = 3e-22
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = -2
Query: 125 VISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSY 9
V+SYN ++ A C R+ Y++ +EM KGI P++V++
Sbjct: 329 VVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTF 367
Score = 57.4 bits (137), Expect(2) = 4e-11
Identities = 30/99 (30%), Positives = 51/99 (51%)
Frame = -3
Query: 430 YNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKAENLLEKMT 251
YN +I AFC+A K L M G D+ T+N LID + + G + LL++MT
Sbjct: 332 YNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMT 391
Query: 250 YQNISPDGFTYNSLLEGYCKANRLEKAYSLLTGKMDASV 134
+ PD Y ++++ CK +++ A+S+ ++ V
Sbjct: 392 KMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGV 430
Score = 35.8 bits (81), Expect(2) = 4e-11
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = -2
Query: 125 VISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSY 9
VISYN +L+ C R A + EM KG+ P+ V+Y
Sbjct: 434 VISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTY 472
Score = 52.0 bits (123), Expect(2) = 3e-10
Identities = 27/91 (29%), Positives = 45/91 (49%)
Frame = -3
Query: 430 YNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKAENLLEKMT 251
YN L+ FC+A V +A ++ + + D+ +YNT+I + K R K L E+M
Sbjct: 297 YNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMC 356
Query: 250 YQNISPDGFTYNSLLEGYCKANRLEKAYSLL 158
+ I PD T+N L++ + + LL
Sbjct: 357 GKGIRPDMVTFNILIDAFLREGSTHVVKKLL 387
Score = 38.1 bits (87), Expect(2) = 3e-10
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = -2
Query: 122 ISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSY 9
I Y ++D LC G+ A+ V ++M + G++P+V+SY
Sbjct: 400 IFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISY 437
Score = 66.6 bits (161), Expect = 3e-09
Identities = 39/115 (33%), Positives = 55/115 (47%)
Frame = -3
Query: 460 GQGIVFKTAVYNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMD 281
G+GI +N LI AF R G + L M K L D Y ++DH K G++D
Sbjct: 357 GKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVD 416
Query: 280 KAENLLEKMTYQNISPDGFTYNSLLEGYCKANRLEKAYSLLTGKMDASVLLALYP 116
A ++ M ++PD +YN+LL G+CK +R+ A L D LYP
Sbjct: 417 VAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHL----FDEMQSKGLYP 467
Score = 47.4 bits (111), Expect(2) = 3e-08
Identities = 28/107 (26%), Positives = 46/107 (42%)
Frame = -3
Query: 454 GIVFKTAVYNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKA 275
G V +N + CR + A L M G D+ +Y +ID R D+A
Sbjct: 114 GFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEA 173
Query: 274 ENLLEKMTYQNISPDGFTYNSLLEGYCKANRLEKAYSLLTGKMDASV 134
+ ++ + +SPD +L+ G C R++ AY L+ G + V
Sbjct: 174 AKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGV 220
Score = 36.2 bits (82), Expect(2) = 3e-08
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = -2
Query: 131 VSVISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSY 9
V+ + YN ++D C +GR A K+ MS+ G P++V+Y
Sbjct: 222 VNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTY 262
Score = 51.2 bits (121), Expect(2) = 8e-06
Identities = 30/89 (33%), Positives = 43/89 (48%)
Frame = -3
Query: 424 ALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKAENLLEKMTYQ 245
AL+ C G V A L + K G + YN LID + + GR+DKA + M+
Sbjct: 194 ALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRT 253
Query: 244 NISPDGFTYNSLLEGYCKANRLEKAYSLL 158
PD TYN LL C+ +++A L+
Sbjct: 254 GCVPDLVTYNILLNYCCEEGMVDEAVRLV 282
Score = 23.9 bits (50), Expect(2) = 8e-06
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -2
Query: 119 SYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSYTT 3
SYN +L C A+ ++ E Q +VVSY T
Sbjct: 296 SYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNT 334
>ref|XP_006483972.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like isoform X1 [Citrus sinensis]
gi|568860947|ref|XP_006483973.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like isoform X2 [Citrus sinensis]
Length = 517
Score = 97.8 bits (242), Expect(2) = 4e-22
Identities = 44/107 (41%), Positives = 69/107 (64%)
Frame = -3
Query: 451 IVFKTAVYNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKAE 272
+ F +YNALI+ FCR G + +A + SFM++NG D+ TYN ++++Y +D+AE
Sbjct: 215 VEFGVLIYNALISGFCRTGRICRAMAIKSFMKRNGCEPDLVTYNAILNYYCDEVMLDEAE 274
Query: 271 NLLEKMTYQNISPDGFTYNSLLEGYCKANRLEKAYSLLTGKMDASVL 131
L+ +M I PD ++YN LL+G C +N+L+KAY + KM+A L
Sbjct: 275 KLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGL 321
Score = 32.3 bits (72), Expect(2) = 4e-22
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = -2
Query: 131 VSVISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSYTT 3
+ V+++ I++ A G S+ A K+L +M +SP+ + YTT
Sbjct: 357 LDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTT 399
Score = 62.8 bits (151), Expect(2) = 4e-12
Identities = 30/99 (30%), Positives = 51/99 (51%)
Frame = -3
Query: 430 YNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKAENLLEKMT 251
YN +I AFC+ G+ +A L M + G D+ T+ LI + + G AE LL +M
Sbjct: 327 YNTVIEAFCKGGQTRRAYKLFEEMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMR 386
Query: 250 YQNISPDGFTYNSLLEGYCKANRLEKAYSLLTGKMDASV 134
N+SPD Y ++++ CK+ + AY + ++ +
Sbjct: 387 GMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGI 425
Score = 33.9 bits (76), Expect(2) = 4e-12
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = -2
Query: 125 VISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSY 9
VISYN +++ LC R S A + +EM +G P+ V++
Sbjct: 429 VISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTF 467
Score = 43.1 bits (100), Expect(2) = 7e-09
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 10/70 (14%)
Frame = -2
Query: 185 QVREGLQSSHWKDGCFCFV----------SVISYNIILDALCNLGRSSTAYKVLKEMSQK 36
Q+ +GL +S+ D + F+ +SYN +++A C G++ AYK+ +EM ++
Sbjct: 294 QLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEEMRRR 353
Query: 35 GISPNVVSYT 6
GI +VV++T
Sbjct: 354 GIELDVVTFT 363
Score = 42.4 bits (98), Expect(2) = 7e-09
Identities = 27/89 (30%), Positives = 40/89 (44%)
Frame = -3
Query: 424 ALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKAENLLEKMTYQ 245
AL+ C G+V A L K + YN LI + + GR+ +A + M
Sbjct: 189 ALVVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRICRAMAIKSFMKRN 248
Query: 244 NISPDGFTYNSLLEGYCKANRLEKAYSLL 158
PD TYN++L YC L++A L+
Sbjct: 249 GCEPDLVTYNAILNYYCDEVMLDEAEKLV 277
Score = 46.6 bits (109), Expect(2) = 9e-09
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Frame = -3
Query: 430 YNALIAAFCRAGEVAKAEI-LASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKAENLLEKM 254
YN L+ C + ++ KA + + ME G L+D +YNT+I+ + K G+ +A L E+M
Sbjct: 292 YNQLLKGLCNSNQLDKAYMFMVKKMEAKG-LRDKVSYNTVIEAFCKGGQTRRAYKLFEEM 350
Query: 253 TYQNISPDGFTYNSLLEGYCKANRLEKAYSLLTGK--MDASVLLALYPTI 110
+ I D T+ L++ + + A LL M+ S LY TI
Sbjct: 351 RRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTI 400
Score = 38.5 bits (88), Expect(2) = 9e-09
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = -2
Query: 122 ISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSY 9
I Y I+D LC TAY V +M ++GI+P+V+SY
Sbjct: 395 ILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISY 432
Score = 57.8 bits (138), Expect = 1e-06
Identities = 34/99 (34%), Positives = 48/99 (48%)
Frame = -3
Query: 457 QGIVFKTAVYNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDK 278
+GI + LI AF R G A AE L + M D Y T+ID K +
Sbjct: 353 RGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGT 412
Query: 277 AENLLEKMTYQNISPDGFTYNSLLEGYCKANRLEKAYSL 161
A + M Q I+PD +YN+L+ G CK++R+ +A L
Sbjct: 413 AYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHL 451
Score = 43.1 bits (100), Expect(2) = 4e-06
Identities = 25/76 (32%), Positives = 32/76 (42%)
Frame = -3
Query: 361 MEKNGSLQDIFTYNTLIDHYSKFGRMDKAENLLEKMTYQNISPDGFTYNSLLEGYCKANR 182
M G D TY +ID K + DKA E M I PD +L+ G C +
Sbjct: 140 MVSKGREPDFVTYTIVIDGLCKAKKFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGK 199
Query: 181 LEKAYSLLTGKMDASV 134
++ AY L G M V
Sbjct: 200 VDLAYELTVGAMKGKV 215
Score = 33.1 bits (74), Expect(2) = 4e-06
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = -2
Query: 137 CFVSVISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSY 9
C +++YN IL+ C+ A K++ EM GI P+V SY
Sbjct: 250 CEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSY 292
>ref|NP_172763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200670|sp|Q9SAD9.1|PPR40_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g13040, mitochondrial; Flags: Precursor
gi|4850387|gb|AAD31057.1|AC007357_6 F3F19.6 [Arabidopsis
thaliana] gi|332190841|gb|AEE28962.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 517
Score = 86.7 bits (213), Expect(2) = 4e-22
Identities = 38/103 (36%), Positives = 63/103 (61%)
Frame = -3
Query: 451 IVFKTAVYNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKAE 272
+ T VYNALI+ FC+AG + KAE L S+M K G D+ TYN L+++Y + +AE
Sbjct: 216 VKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAE 275
Query: 271 NLLEKMTYQNISPDGFTYNSLLEGYCKANRLEKAYSLLTGKMD 143
++ +M I D ++YN LL+ +C+ + +K Y+ + +M+
Sbjct: 276 GVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEME 318
Score = 43.5 bits (101), Expect(2) = 4e-22
Identities = 17/44 (38%), Positives = 29/44 (65%)
Frame = -2
Query: 134 FVSVISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSYTT 3
F V+SY+ +++ C + AY++ +EM QKG+ NVV+YT+
Sbjct: 322 FCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTS 365
Score = 67.8 bits (164), Expect(2) = 6e-13
Identities = 32/99 (32%), Positives = 54/99 (54%)
Frame = -3
Query: 430 YNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKAENLLEKMT 251
Y+ LI FCRA KA L M + G + ++ TY +LI + + G A+ LL++MT
Sbjct: 328 YSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMT 387
Query: 250 YQNISPDGFTYNSLLEGYCKANRLEKAYSLLTGKMDASV 134
+SPD Y ++L+ CK+ ++KAY + ++ +
Sbjct: 388 ELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEI 426
Score = 31.6 bits (70), Expect(2) = 6e-13
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = -2
Query: 122 ISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSY 9
ISYN ++ LC GR + A K+ ++M K P+ +++
Sbjct: 431 ISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTF 468
Score = 71.6 bits (174), Expect = 1e-10
Identities = 36/99 (36%), Positives = 53/99 (53%)
Frame = -3
Query: 457 QGIVFKTAVYNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDK 278
+G+V Y +LI AF R G + A+ L M + G D Y T++DH K G +DK
Sbjct: 354 KGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDK 413
Query: 277 AENLLEKMTYQNISPDGFTYNSLLEGYCKANRLEKAYSL 161
A + M I+PD +YNSL+ G C++ R+ +A L
Sbjct: 414 AYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKL 452
Score = 41.6 bits (96), Expect(2) = 3e-06
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Frame = -3
Query: 454 GIVFKTAVYNALIAAFCRAGEVAKA-EILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDK 278
GI YN L+ CR K + ME G D+ +Y+TLI+ + + K
Sbjct: 285 GIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC-DVVSYSTLIETFCRASNTRK 343
Query: 277 AENLLEKMTYQNISPDGFTYNSLLEGYCKANRLEKAYSLL 158
A L E+M + + + TY SL++ + + A LL
Sbjct: 344 AYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLL 383
Score = 35.0 bits (79), Expect(2) = 3e-06
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -2
Query: 122 ISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSYTT 3
I Y ILD LC G AY V +M + I+P+ +SY +
Sbjct: 396 IFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNS 435
>ref|XP_002889980.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297335822|gb|EFH66239.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 517
Score = 85.1 bits (209), Expect(2) = 4e-22
Identities = 38/97 (39%), Positives = 61/97 (62%)
Frame = -3
Query: 433 VYNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKAENLLEKM 254
VYNALI+ FC+AG + KAE L SFM K G D+ TYN L+++Y + +AE ++ +M
Sbjct: 222 VYNALISGFCKAGRIEKAEALKSFMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMTEM 281
Query: 253 TYQNISPDGFTYNSLLEGYCKANRLEKAYSLLTGKMD 143
I D ++YN LL+ +C+ + ++ YS + +M+
Sbjct: 282 VRSGIQLDAYSYNQLLKRHCRVSHPDRCYSFMLKEME 318
Score = 45.1 bits (105), Expect(2) = 4e-22
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = -2
Query: 134 FVSVISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSYTT 3
F V+SY+ +++ C + AYK+ +EM QKGI NVV++T+
Sbjct: 322 FCDVVSYSTLIETFCRASNTKKAYKLFEEMRQKGIVTNVVTFTS 365
Score = 65.9 bits (159), Expect(2) = 2e-12
Identities = 31/99 (31%), Positives = 54/99 (54%)
Frame = -3
Query: 430 YNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKAENLLEKMT 251
Y+ LI FCRA KA L M + G + ++ T+ +LI + + G A+ LL++MT
Sbjct: 328 YSTLIETFCRASNTKKAYKLFEEMRQKGIVTNVVTFTSLIKAFLREGNSSVAKKLLDQMT 387
Query: 250 YQNISPDGFTYNSLLEGYCKANRLEKAYSLLTGKMDASV 134
+SPD Y ++L+ CK+ ++KAY + ++ +
Sbjct: 388 ELGLSPDRIFYTTILDHLCKSGNVDKAYGIFNDMIEHEI 426
Score = 31.6 bits (70), Expect(2) = 2e-12
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = -2
Query: 122 ISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSY 9
ISYN ++ LC GR + A K+ ++M K P+ +++
Sbjct: 431 ISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTF 468
Score = 70.9 bits (172), Expect = 2e-10
Identities = 36/99 (36%), Positives = 53/99 (53%)
Frame = -3
Query: 457 QGIVFKTAVYNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDK 278
+GIV + +LI AF R G + A+ L M + G D Y T++DH K G +DK
Sbjct: 354 KGIVTNVVTFTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDK 413
Query: 277 AENLLEKMTYQNISPDGFTYNSLLEGYCKANRLEKAYSL 161
A + M I+PD +YNSL+ G C++ R+ +A L
Sbjct: 414 AYGIFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKL 452
>ref|XP_006438222.1| hypothetical protein CICLE_v10031251mg [Citrus clementina]
gi|557540418|gb|ESR51462.1| hypothetical protein
CICLE_v10031251mg [Citrus clementina]
Length = 517
Score = 97.4 bits (241), Expect(2) = 6e-22
Identities = 44/107 (41%), Positives = 69/107 (64%)
Frame = -3
Query: 451 IVFKTAVYNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKAE 272
+ F +YNALI+ FCR G + +A + SFM++NG D+ TYN ++++Y +D+AE
Sbjct: 215 VEFGVLIYNALISGFCRTGRIRRAMAIKSFMKRNGCEPDLVTYNAILNYYCDEVMLDEAE 274
Query: 271 NLLEKMTYQNISPDGFTYNSLLEGYCKANRLEKAYSLLTGKMDASVL 131
L+ +M I PD ++YN LL+G C +N+L+KAY + KM+A L
Sbjct: 275 KLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGL 321
Score = 32.3 bits (72), Expect(2) = 6e-22
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = -2
Query: 131 VSVISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSYTT 3
+ V+++ I++ A G S+ A K+L +M +SP+ + YTT
Sbjct: 357 LDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTT 399
Score = 62.8 bits (151), Expect(2) = 4e-12
Identities = 30/99 (30%), Positives = 51/99 (51%)
Frame = -3
Query: 430 YNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKAENLLEKMT 251
YN +I AFC+ G+ +A L M + G D+ T+ LI + + G AE LL +M
Sbjct: 327 YNTVIEAFCKGGQTRRAYKLFEEMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMR 386
Query: 250 YQNISPDGFTYNSLLEGYCKANRLEKAYSLLTGKMDASV 134
N+SPD Y ++++ CK+ + AY + ++ +
Sbjct: 387 GMNLSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGI 425
Score = 33.9 bits (76), Expect(2) = 4e-12
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = -2
Query: 125 VISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSY 9
VISYN +++ LC R S A + +EM +G P+ V++
Sbjct: 429 VISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTF 467
Score = 46.6 bits (109), Expect(2) = 9e-09
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Frame = -3
Query: 430 YNALIAAFCRAGEVAKAEI-LASFMEKNGSLQDIFTYNTLIDHYSKFGRMDKAENLLEKM 254
YN L+ C + ++ KA + + ME G L+D +YNT+I+ + K G+ +A L E+M
Sbjct: 292 YNQLLKGLCNSNQLDKAYMFMVKKMEAKG-LRDKVSYNTVIEAFCKGGQTRRAYKLFEEM 350
Query: 253 TYQNISPDGFTYNSLLEGYCKANRLEKAYSLLTGK--MDASVLLALYPTI 110
+ I D T+ L++ + + A LL M+ S LY TI
Sbjct: 351 RRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTI 400
Score = 38.5 bits (88), Expect(2) = 9e-09
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = -2
Query: 122 ISYNIILDALCNLGRSSTAYKVLKEMSQKGISPNVVSY 9
I Y I+D LC TAY V +M ++GI+P+V+SY
Sbjct: 395 ILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISY 432
Score = 57.8 bits (138), Expect = 1e-06
Identities = 34/99 (34%), Positives = 48/99 (48%)
Frame = -3
Query: 457 QGIVFKTAVYNALIAAFCRAGEVAKAEILASFMEKNGSLQDIFTYNTLIDHYSKFGRMDK 278
+GI + LI AF R G A AE L + M D Y T+ID K +
Sbjct: 353 RGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGT 412
Query: 277 AENLLEKMTYQNISPDGFTYNSLLEGYCKANRLEKAYSL 161
A + M Q I+PD +YN+L+ G CK++R+ +A L
Sbjct: 413 AYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHL 451