BLASTX nr result

ID: Ephedra28_contig00022391 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00022391
         (1573 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002980975.1| hypothetical protein SELMODRAFT_420539 [Sela...    73   3e-10
ref|XP_002982455.1| hypothetical protein SELMODRAFT_421846 [Sela...    73   3e-10
ref|XP_001759172.1| predicted protein [Physcomitrella patens] gi...    68   9e-09

>ref|XP_002980975.1| hypothetical protein SELMODRAFT_420539 [Selaginella moellendorffii]
            gi|300151029|gb|EFJ17676.1| hypothetical protein
            SELMODRAFT_420539 [Selaginella moellendorffii]
          Length = 726

 Score = 73.2 bits (178), Expect = 3e-10
 Identities = 46/125 (36%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
 Frame = -2

Query: 1398 LCCHMCTGREKAVGEYLKXXXXXXXXXXXXXRTRHGEDLDIEKADDGGRKWVCPXXXXXX 1219
            + CH C  R+K V + +                RHGE LD E+ ++G R WVCP      
Sbjct: 68   ITCHWC--RQKTVEDKVCCSRCPISFCGSCLANRHGEILD-EQMEEGVR-WVCPKCRGGC 123

Query: 1218 XXXXXXXXXXCSKCRSL--IRGTGRLPDTARSLGFSNVHDYLVHLETGESPLQVSSRKLG 1045
                      C  CR    +  TG L   A   GF+N HDYL+HLETGES  +++ RKLG
Sbjct: 124  GPGCVDSCCNCGPCRKAQGLAPTGVLKHGAAKSGFNNAHDYLIHLETGESVREIAQRKLG 183

Query: 1044 KGWCK 1030
            + W K
Sbjct: 184  RDWIK 188


>ref|XP_002982455.1| hypothetical protein SELMODRAFT_421846 [Selaginella moellendorffii]
            gi|300149554|gb|EFJ16208.1| hypothetical protein
            SELMODRAFT_421846 [Selaginella moellendorffii]
          Length = 728

 Score = 73.2 bits (178), Expect = 3e-10
 Identities = 46/125 (36%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
 Frame = -2

Query: 1398 LCCHMCTGREKAVGEYLKXXXXXXXXXXXXXRTRHGEDLDIEKADDGGRKWVCPXXXXXX 1219
            + CH C  R+K V + +                RHGE LD E+ ++G R WVCP      
Sbjct: 71   ITCHWC--RQKTVEDKVCCSRCPISFCGSCLANRHGEILD-EQMEEGVR-WVCPKCRGGC 126

Query: 1218 XXXXXXXXXXCSKCRSL--IRGTGRLPDTARSLGFSNVHDYLVHLETGESPLQVSSRKLG 1045
                      C  CR    +  TG L   A   GF+N HDYL+HLETGES  +++ RKLG
Sbjct: 127  GPGCVDSCCNCGPCRKAQGLAPTGVLKHGAAKSGFNNAHDYLIHLETGESVREIAQRKLG 186

Query: 1044 KGWCK 1030
            + W K
Sbjct: 187  RDWIK 191


>ref|XP_001759172.1| predicted protein [Physcomitrella patens] gi|162689485|gb|EDQ75856.1|
            predicted protein [Physcomitrella patens]
          Length = 1294

 Score = 68.2 bits (165), Expect = 9e-09
 Identities = 41/121 (33%), Positives = 60/121 (49%), Gaps = 2/121 (1%)
 Frame = -2

Query: 1392 CHMCTGREKAVGEYLKXXXXXXXXXXXXXRTRHGEDLDIEKADDGGRKWVCPXXXXXXXX 1213
            CH C  R+K V  ++K               R+GE++  E A+  G +W+CP        
Sbjct: 635  CHWC--RQKTVEHHVKCRECTIHFCGPCLMNRNGENIREELAE--GVRWLCPKCRNGCGS 690

Query: 1212 XXXXXXXXCSKCRSLI--RGTGRLPDTARSLGFSNVHDYLVHLETGESPLQVSSRKLGKG 1039
                       CR       TG++   AR+ GF NVHDYLVHLETGE+ ++++ RK+G+ 
Sbjct: 691  GCNNCCNC-GPCRKADGKAPTGQVVFQARNAGFENVHDYLVHLETGETSVEIAQRKVGRD 749

Query: 1038 W 1036
            W
Sbjct: 750  W 750


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