BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00022324
         (2082 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004298821.1| PREDICTED: DNA repair helicase XPB1-like [Fr...   528   e-147
ref|XP_006363964.1| PREDICTED: DNA repair helicase XPB1-like [So...   522   e-145
ref|XP_002970284.1| hypothetical protein SELMODRAFT_147068 [Sela...   522   e-145
ref|XP_002273444.1| PREDICTED: DNA repair helicase XPB1-like [Vi...   522   e-145
ref|XP_001774482.1| predicted protein [Physcomitrella patens] gi...   521   e-145
ref|XP_002456182.1| hypothetical protein SORBIDRAFT_03g031750 [S...   521   e-145
ref|XP_004975516.1| PREDICTED: DNA repair helicase XPB1-like [Se...   520   e-144
ref|XP_002509835.1| rad25/xp-B DNA repair helicase, putative [Ri...   520   e-144
ref|XP_006584727.1| PREDICTED: DNA repair helicase XPB1-like iso...   519   e-144
ref|XP_006580561.1| PREDICTED: DNA repair helicase XPB1-like iso...   519   e-144
ref|XP_004245582.1| PREDICTED: DNA repair helicase XPB1-like [So...   519   e-144
ref|XP_003532875.1| PREDICTED: DNA repair helicase XPB1-like iso...   519   e-144
ref|XP_003525384.1| PREDICTED: DNA repair helicase XPB1-like iso...   519   e-144
ref|XP_006343950.1| PREDICTED: DNA repair helicase XPB1-like [So...   519   e-144
ref|XP_006405358.1| hypothetical protein EUTSA_v10027651mg [Eutr...   519   e-144
gb|EOY24804.1| Xeroderma pigmentosum complementation group B 2 i...   519   e-144
gb|EOY24802.1| Xeroderma pigmentosum complementation group B 1 i...   519   e-144
ref|XP_002870639.1| predicted protein [Arabidopsis lyrata subsp....   519   e-144
tpg|DAA58033.1| TPA: hypothetical protein ZEAMMB73_851798 [Zea m...   516   e-143
ref|XP_006663357.1| PREDICTED: DNA repair helicase XPB1-like [Or...   515   e-143

>ref|XP_004298821.1| PREDICTED: DNA repair helicase XPB1-like [Fragaria vesca subsp.
            vesca]
          Length = 768

 Score =  528 bits (1361), Expect = e-147
 Identities = 299/624 (47%), Positives = 380/624 (60%), Gaps = 57/624 (9%)
 Frame = +1

Query: 1    KQAYDFCIAIAEPESRLENFHEYKITAASLYGAVSAGMPPQDIVKYLDFLSKTHVPDSIR 180
            KQAYDF IAIAEP  R E+ HEY +T  SLY AVS G+  Q I+  LD LSKT +P  + 
Sbjct: 83   KQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETQTIISVLDKLSKTKLPKEMI 142

Query: 181  RFIKECTENVXXXXXXXXXXXFIIEG-IPSAI-----DRVYSR---ISHAVLER------ 315
             FI   T N            + +E   P  +     D V S+   +S A  E+      
Sbjct: 143  DFIHGSTANYGKVKLVLKKNRYYVESPFPEVLKKLLRDDVISKARIVSEAANEKGGFTIS 202

Query: 316  ----------------------KQISNTHAVLEMNPSKVVEARATC--RTINYPLVEEYD 423
                                   +   THA  E++PS+V + +  C    +NYP++EEYD
Sbjct: 203  KTLGEIAADSSGLLNEAELAAAAEEKETHA-FEIDPSQVEKVKERCLPNALNYPMLEEYD 261

Query: 424  YKNDTGCPTLDIKLDKKAQLRPYQMKSVDKMFVNGKARSGVIVLPCGAGKSLTGVYAAVR 603
            ++NDT  P LD++L  +AQ RPYQ KS+ KMF NG+ARSG+IVLPCGAGKSL GV AA R
Sbjct: 262  FRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAASR 321

Query: 604  LGKPVLCFANTSVSVEQWAFQFETWTNLHASKVQSVTSDTKSKDFNAKADIIVTTYSMYG 783
            + K  LC A  +VSV+QWAFQF+ W+ +    +   TSD+K + F   A ++VTTY+M  
Sbjct: 322  IKKSCLCLATNAVSVDQWAFQFKLWSTIRDEHICRFTSDSKER-FRGNAGVVVTTYNMVA 380

Query: 784  YTGQRSKDSEAIMNAIEGREWGLILMDEVHVVPAKNFREAVAKTKSHCKLGLTATLLRED 963
            + G+RS++SE I+  I  REWGL+LMDEVHVVPA+ FR+ +A TKSHCKLGLTATL+RED
Sbjct: 381  FGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAQMFRKVIAITKSHCKLGLTATLVRED 440

Query: 964  DAIDDLEFIIGPKLYEANWQDLVQAGYLAKVTCFEVLCPMTKDFLREYLDLFLHGSNNWH 1143
            + I DL F+IGPKLYEANW DLV+ G++A V C EV CPMTK+F  EYL           
Sbjct: 441  ERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL----------- 489

Query: 1144 GREEKRSVQHTLYGVNPMKLMACEYLIKYHE---------------AXXXXXXXLNKPMI 1278
             ++E    +  LY +NP K  ACE+LI++HE               A       L KPMI
Sbjct: 490  -KKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMI 548

Query: 1279 KGETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDLPEATVVIQISSQGASRRQEAQRL 1458
             G TSH ER  +L+ F+T     TVFLSKVGD SID+PEA V+IQISS   SRRQEAQRL
Sbjct: 549  YGATSHVERTKILEAFKTSKDVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRL 608

Query: 1459 GRILRPKIRNEQGMLSGG---TAIFYSLVSQDTAEMLYATKRQKFLVNQGYTFNTLTNFP 1629
            GRILR K +    M  G     A FYSLVS DT EM Y+TKRQ+FL++QGY+F  +T+ P
Sbjct: 609  GRILRAKGKLRDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLP 668

Query: 1630 PPEGRGDLIFARPEVQAQLLKEAL 1701
            PP+   DL + R + Q QLL + L
Sbjct: 669  PPDSGADLSYHRLDEQLQLLSKVL 692


>ref|XP_006363964.1| PREDICTED: DNA repair helicase XPB1-like [Solanum tuberosum]
          Length = 728

 Score =  522 bits (1345), Expect = e-145
 Identities = 287/611 (46%), Positives = 380/611 (62%), Gaps = 33/611 (5%)
 Frame = +1

Query: 4    QAYDFCIAIAEPESRLENFHEYKITAASLYGAVSAGMPPQDIVKYLDFLSKTHVPDSIRR 183
            QA DF IAIAEP SR  + HEY +T  SLY AVS  +    I+  L+ LSKT++P  +  
Sbjct: 71   QASDFLIAIAEPVSRPNSIHEYNLTPHSLYAAVSVSLQTHTIISVLNKLSKTNLPKEVVD 130

Query: 184  FIKECTENVXXXXXXXXXXXFIIEGIPSAIDRVYSRISHAVLERKQISNT------HAVL 345
            FI+  T N            + IE     +  + + +   V+ R +I+NT          
Sbjct: 131  FIQSSTSNYGKVKLVLKKNRYFIESPCPLV--LKTLLKDDVISRARIANTIEEEEAEYSF 188

Query: 346  EMNPSKVVEARATC--RTINYPLVEEYDYKNDTGCPTLDIKLDKKAQLRPYQMKSVDKMF 519
            E++P++V   +  C    +NYP++EEYD++NDT  P LDI+L   AQ RPYQ+KS+ KMF
Sbjct: 189  EIDPAQVESVKQRCLPNALNYPMLEEYDFRNDTVNPDLDIELKINAQPRPYQVKSLSKMF 248

Query: 520  VNGKARSGVIVLPCGAGKSLTGVYAAVRLGKPVLCFANTSVSVEQWAFQFETWTNLHASK 699
             NG+ARSG+IVLPCGAGKSL GV AA R+ K  LC A  +VSV+QWA+QF  W+ +   +
Sbjct: 249  GNGRARSGIIVLPCGAGKSLVGVSAATRINKSCLCLATNAVSVDQWAYQFRLWSTIRDDQ 308

Query: 700  VQSVTSDTKSKDFNAKADIIVTTYSMYGYTGQRSKDSEAIMNAIEGREWGLILMDEVHVV 879
            +   T+D+K + F   A ++VTTY+M  + G+RS++SE ++  I  REWGL+L+DEVHVV
Sbjct: 309  ICRFTTDSKEQ-FRGDAGVVVTTYNMVAFGGKRSEESEKLIEQIRNREWGLLLLDEVHVV 367

Query: 880  PAKNFREAVAKTKSHCKLGLTATLLREDDAIDDLEFIIGPKLYEANWQDLVQAGYLAKVT 1059
            PA+ FR+ ++ TKSHCKLGLTATL+RED+ I DL F+IGPKLYEANW DL + G++A V 
Sbjct: 368  PAQMFRKVISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWSDLAKGGFIANVQ 427

Query: 1060 CFEVLCPMTKDFLREYLDLFLHGSNNWHGREEKRSVQHTLYGVNPMKLMACEYLIKYHE- 1236
            C EV CPMTK+F  EYL            ++E    +  LY +NP K  ACE+LI++HE 
Sbjct: 428  CAEVWCPMTKEFFAEYL------------KQENHRKRKALYVMNPNKFRACEFLIRFHEQ 475

Query: 1237 --------------AXXXXXXXLNKPMIKGETSHEERLLVLKRFRTEDKGYTVFLSKVGD 1374
                          A       L KPMI G TSH ER+ +L+ FRT  +  T+FLSKVGD
Sbjct: 476  QRDDKIIVFSDNLFALTEYSMRLRKPMIYGCTSHAERMKILEAFRTNPEVNTIFLSKVGD 535

Query: 1375 TSIDLPEATVVIQISSQGASRRQEAQRLGRILRPKIRNEQGMLSGGT------AIFYSLV 1536
             SID+PEA V+IQISS   SRRQEAQRLGRILR K    +  L GG+      A FYSLV
Sbjct: 536  NSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAK----RARLQGGSKTEEYDAFFYSLV 591

Query: 1537 SQDTAEMLYATKRQKFLVNQGYTFNTLTNFPPPEGRGDLIFARPEVQAQLLKEALQD--- 1707
            S DT EM Y+TKRQ+FL++QGY+F  +TN PPP+   +L +     Q +LL   L     
Sbjct: 592  STDTQEMYYSTKRQQFLIDQGYSFKVITNLPPPDSGPELSYYHVGEQLELLGRVLSAGDD 651

Query: 1708 -KSMEEVPKEQ 1737
               MEE  +E+
Sbjct: 652  IVGMEETEEEE 662


>ref|XP_002970284.1| hypothetical protein SELMODRAFT_147068 [Selaginella moellendorffii]
            gi|300161800|gb|EFJ28414.1| hypothetical protein
            SELMODRAFT_147068 [Selaginella moellendorffii]
          Length = 713

 Score =  522 bits (1345), Expect = e-145
 Identities = 295/621 (47%), Positives = 376/621 (60%), Gaps = 54/621 (8%)
 Frame = +1

Query: 1    KQAYDFCIAIAEPESRLENFHEYKITAASLYGAVSAGMPPQDIVKYLDFLSKTHVPDSIR 180
            KQAYDF IAIAEP  R E+ HEY +T  SLY AVS G+  Q ++  L+ LSK  +P  I 
Sbjct: 35   KQAYDFLIAIAEPVCRPEHMHEYNLTPHSLYAAVSVGLETQTVITVLERLSKARLPQEIV 94

Query: 181  RFIKECTENVXXXXXXXXXXXFIIEG-IPSAIDRV-----------YSRIS--HAVLERK 318
             FIKE T N            + +E   P  ++RV           +S  S  H     K
Sbjct: 95   NFIKESTLNYGKVKLVLQKNRYFVESSYPEILERVLKDDVISRARIFSEASAEHGFTVNK 154

Query: 319  QISNTHAV-------------------LEMNPSKVVEARATC--RTINYPLVEEYDYKND 435
             +SN                        E++P++V   +  C    +NYP++EEYD++ND
Sbjct: 155  SLSNATTEQDLLAGDEVAAGEEKDVMSFEIDPAQVEHVKQRCLPSALNYPMLEEYDFRND 214

Query: 436  TGCPTLDIKLDKKAQLRPYQMKSVDKMFVNGKARSGVIVLPCGAGKSLTGVYAAVRLGKP 615
            +  P L I+L  +AQ RPYQ KS+ KMF NG+ARSG+IVLPCGAGKSL GV AA R+ K 
Sbjct: 215  SVNPDLSIELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIRKS 274

Query: 616  VLCFANTSVSVEQWAFQFETWTNLHASKVQSVTSDTKSKDFNAKADIIVTTYSMYGYTGQ 795
             LC A  +VSV+QWAFQF+ W+ +   ++   TSD+K K F +   ++VTTY+M  + G+
Sbjct: 275  CLCLATNAVSVDQWAFQFKLWSTIRDDQISRFTSDSKDK-FKSNVGVVVTTYNMVAFKGK 333

Query: 796  RSKDSEAIMNAIEGREWGLILMDEVHVVPAKNFREAVAKTKSHCKLGLTATLLREDDAID 975
            RS++SE ++  I+ REWGL+LMDEVHVVPA  FR+ ++ TKSHCKLGLTATL+RED+ I 
Sbjct: 334  RSEESEKVIELIKSREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVREDERIT 393

Query: 976  DLEFIIGPKLYEANWQDLVQAGYLAKVTCFEVLCPMTKDFLREYLDLFLHGSNNWHGREE 1155
            DL F+IGPKLYEANW DLV+ GY+A V C EV CPMTK+F  EYL            ++E
Sbjct: 394  DLNFLIGPKLYEANWLDLVKGGYIANVQCAEVWCPMTKEFYAEYL------------KKE 441

Query: 1156 KRSVQHTLYGVNPMKLMACEYLIKYHE---------------AXXXXXXXLNKPMIKGET 1290
             R  Q  LY +NP K  ACE+LI++HE               A       L +P I G T
Sbjct: 442  NRK-QQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFSDNLFALREYATKLKRPFIYGPT 500

Query: 1291 SHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDLPEATVVIQISSQGASRRQEAQRLGRIL 1470
            SH ER  +L  F+      TVFLSKVGD SID+PEA V+IQISS   SRRQEAQRLGRIL
Sbjct: 501  SHHERTKILYAFKHSPDVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRIL 560

Query: 1471 RPKIRNEQGMLSGGT----AIFYSLVSQDTAEMLYATKRQKFLVNQGYTFNTLTNFPPPE 1638
            R K    +  + GGT    A FYSLVS DT EM Y++KRQ+FL++QGY+F  LT+ PP +
Sbjct: 561  RAK-GKPKDRVKGGTEEFNAFFYSLVSTDTQEMYYSSKRQQFLIDQGYSFKVLTSLPPAD 619

Query: 1639 GRGDLIFARPEVQAQLLKEAL 1701
               DL F R E Q  LL + L
Sbjct: 620  SGADLSFHRLEDQLDLLSKVL 640


>ref|XP_002273444.1| PREDICTED: DNA repair helicase XPB1-like [Vitis vinifera]
          Length = 771

 Score =  522 bits (1344), Expect = e-145
 Identities = 297/628 (47%), Positives = 380/628 (60%), Gaps = 61/628 (9%)
 Frame = +1

Query: 1    KQAYDFCIAIAEPESRLENFHEYKITAASLYGAVSAGMPPQDIVKYLDFLSKTHVPDSIR 180
            KQAYDF IAIAEP  R E+ HEY +T  SLY AVS G+  + I+  L  LSKT +P  + 
Sbjct: 85   KQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIIAVLSKLSKTKLPKEMI 144

Query: 181  RFIKECTENVXXXXXXXXXXXFIIEG-IPSAIDRVY-------SRISH------------ 300
             FI   T N            + +E   P  +  +        SRISH            
Sbjct: 145  DFIHASTANYGKVKLVLKKNRYFVESPFPEVLKTLLRDEVISRSRISHEGSTGNDGFTIS 204

Query: 301  --------------------AVLERKQISNTHAVLEMNPSKVVEARATC--RTINYPLVE 414
                                A  E K+   TH+  E++P++V   +  C    +NYP++E
Sbjct: 205  KTVGEIEGRHDELINEAELAAAAEEKE---THS-FEVDPAQVENVKQRCLPNALNYPMLE 260

Query: 415  EYDYKNDTGCPTLDIKLDKKAQLRPYQMKSVDKMFVNGKARSGVIVLPCGAGKSLTGVYA 594
            EYD++NDT  P LD++L  +AQ RPYQ KS+ KMF NG+ARSG+IVLPCGAGKSL GV A
Sbjct: 261  EYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSA 320

Query: 595  AVRLGKPVLCFANTSVSVEQWAFQFETWTNLHASKVQSVTSDTKSKDFNAKADIIVTTYS 774
            A R+ K  LC A  +VSV+QWAFQF+ W+ +   ++   TSD+K + F   A ++VTTY+
Sbjct: 321  ACRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDEQICRFTSDSKER-FRGNAGVVVTTYN 379

Query: 775  MYGYTGQRSKDSEAIMNAIEGREWGLILMDEVHVVPAKNFREAVAKTKSHCKLGLTATLL 954
            M  + G+RS++SE I+  I  REWGL+LMDEVHVVPA  FR+ ++ TKSHCKLGLTATL+
Sbjct: 380  MVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLV 439

Query: 955  REDDAIDDLEFIIGPKLYEANWQDLVQAGYLAKVTCFEVLCPMTKDFLREYLDLFLHGSN 1134
            RED+ I DL F+IGPKLYEANW DLV+ G++A V C EV CPMTK+F  EYL        
Sbjct: 440  REDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL-------- 491

Query: 1135 NWHGREEKRSVQHTLYGVNPMKLMACEYLIKYHE---------------AXXXXXXXLNK 1269
                ++E    +  LY +NP K  ACE+LI++HE               A       L K
Sbjct: 492  ----KKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRK 547

Query: 1270 PMIKGETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDLPEATVVIQISSQGASRRQEA 1449
            PMI G TSH ER  +L+ F+T     T+FLSKVGD SID+PEA V+IQISS   SRRQEA
Sbjct: 548  PMIYGATSHVERTKILEAFKTHKDVNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEA 607

Query: 1450 QRLGRILRPKIRNEQGMLSGG----TAIFYSLVSQDTAEMLYATKRQKFLVNQGYTFNTL 1617
            QRLGRILR K R  Q  L+GG     A FYSLVS DT EM Y+TKRQ+FL++QGY+F  +
Sbjct: 608  QRLGRILRAKGR-LQDRLAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKII 666

Query: 1618 TNFPPPEGRGDLIFARPEVQAQLLKEAL 1701
            T+ PPP+   DL + R + Q  LL + L
Sbjct: 667  TSLPPPDSGADLSYHRLDEQLALLGKVL 694


>ref|XP_001774482.1| predicted protein [Physcomitrella patens] gi|162674194|gb|EDQ60706.1|
            predicted protein [Physcomitrella patens]
          Length = 734

 Score =  521 bits (1342), Expect = e-145
 Identities = 300/656 (45%), Positives = 391/656 (59%), Gaps = 59/656 (8%)
 Frame = +1

Query: 1    KQAYDFCIAIAEPESRLENFHEYKITAASLYGAVSAGMPPQDIVKYLDFLSKTHVPDSIR 180
            KQAYDF IAIAEP  R E+ HEY +T  SLY AVS G+  + I+  LD LSKT +P  I 
Sbjct: 49   KQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIITVLDRLSKTKLPKEIL 108

Query: 181  RFIKECTENVXXXXXXXXXXXFIIEG-IPSAI-----DRVYSRISHAVLERKQISNTHAV 342
             FI+  T+N            + +E   P  +     D   SR   A  E   + ++   
Sbjct: 109  DFIRGSTQNYGKVKLVLQKNRYFVESPFPEVLQALLRDDTISRARLASSEEPGVGSSSFT 168

Query: 343  L--------------------------------EMNPSKVVEARATC--RTINYPLVEEY 420
            +                                E++PS+V   +  C    +NYP++EEY
Sbjct: 169  VSRAPHETGAADPELLGGDDAVADAEEKDIHSFEIDPSQVEHVKQRCLPNALNYPMLEEY 228

Query: 421  DYKNDTGCPTLDIKLDKKAQLRPYQMKSVDKMFVNGKARSGVIVLPCGAGKSLTGVYAAV 600
            D++ND   PTLDIKL  +AQ RPYQ KS+ KMF NG+ARSG+IVLPCGAGKSL GV AA 
Sbjct: 229  DFRNDNVNPTLDIKLKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAC 288

Query: 601  RLGKPVLCFANTSVSVEQWAFQFETWTNLHASKVQSVTSDTKSKDFNAKADIIVTTYSMY 780
            R+ K VLC A  +VSV+QWAFQF+ W+ +   ++   TSD+K + F     ++VTTY+M 
Sbjct: 289  RISKSVLCLATNAVSVDQWAFQFKLWSTVGDHQISRFTSDSKER-FRGSVGVVVTTYNMV 347

Query: 781  GYTGQRSKDSEAIMNAIEGREWGLILMDEVHVVPAKNFREAVAKTKSHCKLGLTATLLRE 960
             + G+RS++S+ I+  I+ REWGL+LMDEVHVVPA  FR+ ++ TKSHCKLGLTATL+RE
Sbjct: 348  AFGGKRSEESQKIIEEIQNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVRE 407

Query: 961  DDAIDDLEFIIGPKLYEANWQDLVQAGYLAKVTCFEVLCPMTKDFLREYLDLFLHGSNNW 1140
            D+ I DL F+IGPKLYEANW DLV+ GY+A V C EV CPMTK+F REYL          
Sbjct: 408  DERISDLNFLIGPKLYEANWLDLVKGGYIANVQCAEVWCPMTKEFYREYL---------- 457

Query: 1141 HGREEKRSVQHTLYGVNPMKLMACEYLIKYHE---------------AXXXXXXXLNKPM 1275
              ++E    +  LY +NP K  ACE+LI++HE               A       L KP 
Sbjct: 458  --KKENSRKKQGLYVMNPNKFRACEFLIRFHEEQRGDKIIVFSDNLFALREYATKLRKPF 515

Query: 1276 IKGETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDLPEATVVIQISSQGASRRQEAQR 1455
            I G TSH ER  +L  F+   +  TVFLSKVGD SID+PEA V+IQISS   SRRQEAQR
Sbjct: 516  IYGPTSHHERTRILYAFKHSPQVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQR 575

Query: 1456 LGRILRPKIRNEQGMLSGGT----AIFYSLVSQDTAEMLYATKRQKFLVNQGYTFNTLTN 1623
            LGRILR K +++  M +GGT    A FYSLVS DT EM Y+TKRQ+FL++QGY+F  +T+
Sbjct: 576  LGRILRAKGKHKDRM-AGGTEEFNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITS 634

Query: 1624 FPPPEGRGDLIFARPEVQAQLLKEALQDKSMEEVPKEQPKKRKPDAGRHDLFRKRY 1791
             PP +   +L +   + Q  LL + L     + +  EQ  +   D  R + F +RY
Sbjct: 635  LPPADSGPELSYHSLDDQMNLLTKVLH-AGEDSIGIEQLDEDVDDITR-NRFTRRY 688


>ref|XP_002456182.1| hypothetical protein SORBIDRAFT_03g031750 [Sorghum bicolor]
            gi|241928157|gb|EES01302.1| hypothetical protein
            SORBIDRAFT_03g031750 [Sorghum bicolor]
          Length = 767

 Score =  521 bits (1341), Expect = e-145
 Identities = 309/694 (44%), Positives = 394/694 (56%), Gaps = 97/694 (13%)
 Frame = +1

Query: 1    KQAYDFCIAIAEPESRLENFHEYKITAASLYGAVSAGMPPQDIVKYLDFLSKTHVPDSIR 180
            KQAYDF IAIAEP  R E+ HEY +T  SLY AVS G+    I+  L  LSKT +P  I 
Sbjct: 86   KQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETSTIISVLSKLSKTKLPREII 145

Query: 181  RFIKECTENVXXXXXXXXXXXFIIEG-IPSAI-----DRVYSRI-----------SHAVL 309
             FI   T N            + +E   P  +     D V SR            S  V 
Sbjct: 146  DFIHASTANYGKVKLVLKKNRYFVESPFPEVLSNLLRDEVISRARISPEDSLGAPSFTVS 205

Query: 310  ERK-QISNTHAVL------------------EMNPSKVVEARATC--RTINYPLVEEYDY 426
            +   QI++ H  L                  E++PS+V   +  C    +NYP++EEYD+
Sbjct: 206  KTSGQIASGHEDLLNGMEIAAATEDKETHSFEIDPSQVENVKQRCLPNALNYPMLEEYDF 265

Query: 427  KNDTGCPTLDIKLDKKAQLRPYQMKSVDKMFVNGKARSGVIVLPCGAGKSLTGVYAAVRL 606
            +NDT  P L+++L  +A+ RPYQ KS+ KMF NG+ARSG+IVLPCGAGKSL GV AA R+
Sbjct: 266  RNDTVNPDLEMELKPQARPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRI 325

Query: 607  GKPVLCFANTSVSVEQWAFQFETWTNLHASKVQSVTSDTKSKDFNAKADIIVTTYSMYGY 786
             K  LC A  +VSV+QWAFQF+ W+ +    +   TSD K K F   A ++VTTY+M  +
Sbjct: 326  KKSCLCLATNAVSVDQWAFQFKLWSTIKDEHISRFTSDNKEK-FTGMASVVVTTYNMVAF 384

Query: 787  TGQRSKDSEAIMNAIEGREWGLILMDEVHVVPAKNFREAVAKTKSHCKLGLTATLLREDD 966
             G+RS+DSE I+  I  REWGL+LMDEVHVVPA  FR+ ++ TKSHCKLGLTATL+RED+
Sbjct: 385  GGKRSEDSEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVREDE 444

Query: 967  AIDDLEFIIGPKLYEANWQDLVQAGYLAKVTCFEVLCPMTKDFLREYLDLFLHGSNNWHG 1146
             I DL F+IGPKLYEANW DLV+ G++A V C EV CPMTK+F  EYL            
Sbjct: 445  RITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL------------ 492

Query: 1147 REEKRSVQHTLYGVNPMKLMACEYLIKYHE---------------AXXXXXXXLNKPMIK 1281
            ++E    +  LY +NP K  ACE+LI++HE               A       L KPMI 
Sbjct: 493  KKENSKKKQVLYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTAYAMKLRKPMIF 552

Query: 1282 GETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDLPEATVVIQISSQGASRRQEAQRLG 1461
            G TSH ER  +L +F+   +  T+FLSKVGD SID+PEA V+IQISS   SRRQEAQRLG
Sbjct: 553  GATSHAERTRILYQFKNSPEVNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLG 612

Query: 1462 RILRPKIRNEQGMLSGG---TAIFYSLVSQDTAEMLYATKRQKFLVNQGYTFNTLTNFPP 1632
            RILR K +++  M  G     A FYSLVS DT EM Y+TKRQ+FL++QGY+F  +T+ PP
Sbjct: 613  RILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPP 672

Query: 1633 PEGRGDLIFARPEVQAQLLKEALQD-------KSMEE----------------------- 1722
            PE   +L F   + Q +LL + L         + +EE                       
Sbjct: 673  PEEGPNLSFYTLDEQLELLSKVLNAGDDMIGVERLEEDSDGKALLRARRSAGSMSAFSGA 732

Query: 1723 -----------VPKEQPKKRKPDAGRHDLFRKRY 1791
                         K  PKK K  + RH LF+KRY
Sbjct: 733  GGMVYMEYSTGKGKGAPKKHKDPSKRHHLFKKRY 766


>ref|XP_004975516.1| PREDICTED: DNA repair helicase XPB1-like [Setaria italica]
          Length = 765

 Score =  520 bits (1339), Expect = e-144
 Identities = 305/694 (43%), Positives = 393/694 (56%), Gaps = 96/694 (13%)
 Frame = +1

Query: 1    KQAYDFCIAIAEPESRLENFHEYKITAASLYGAVSAGMPPQDIVKYLDFLSKTHVPDSIR 180
            KQAYDF IAIAEP  R E+ HEY +T  SLY AVS G+    I+  L  LSKT +P  I 
Sbjct: 86   KQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETSTIISVLSKLSKTKLPREII 145

Query: 181  RFIKECTENVXXXXXXXXXXXFIIEG-IPSAIDRVY-----------------------S 288
             FI   T N            + +E   P  +  +                        S
Sbjct: 146  DFIHGSTANYGKVKLVLKKNRYFVESPFPEVLSNLLNDDVISKARISPEDSLGASSFTIS 205

Query: 289  RISHAVLERKQISN------------THAVLEMNPSKVVEARATC--RTINYPLVEEYDY 426
            + S      +++ N            TH+  E++PS+V   +  C    +NYP++EEYD+
Sbjct: 206  KTSGQASGHEELLNGMDLAAATEDKETHS-FEIDPSQVENVKQRCLPNALNYPMLEEYDF 264

Query: 427  KNDTGCPTLDIKLDKKAQLRPYQMKSVDKMFVNGKARSGVIVLPCGAGKSLTGVYAAVRL 606
            +NDT  P LD++L  +A+ RPYQ KS+ KMF NG+ARSG+IVLPCGAGKSL GV AA R+
Sbjct: 265  RNDTVNPDLDMELKPQARPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRI 324

Query: 607  GKPVLCFANTSVSVEQWAFQFETWTNLHASKVQSVTSDTKSKDFNAKADIIVTTYSMYGY 786
             K  LC A  +VSV+QWAFQF+ W+ +    +   TSD K K F   A ++VTTY+M  +
Sbjct: 325  KKSCLCLATNAVSVDQWAFQFKLWSTIKDDHISRFTSDNKEK-FRGMAGVVVTTYNMVAF 383

Query: 787  TGQRSKDSEAIMNAIEGREWGLILMDEVHVVPAKNFREAVAKTKSHCKLGLTATLLREDD 966
             G+RS+DSE I+  I  REWGL+LMDEVHVVPA  FR+ ++ TKSHCKLGLTATL+RED+
Sbjct: 384  GGKRSEDSEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVREDE 443

Query: 967  AIDDLEFIIGPKLYEANWQDLVQAGYLAKVTCFEVLCPMTKDFLREYLDLFLHGSNNWHG 1146
             I DL F+IGPKLYEANW DLV+ G++A V C EV CPMTK+F  EYL            
Sbjct: 444  RITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL------------ 491

Query: 1147 REEKRSVQHTLYGVNPMKLMACEYLIKYHE---------------AXXXXXXXLNKPMIK 1281
            ++E    +  LY +NP K  ACE+LI++HE               A       L KPMI 
Sbjct: 492  KKENSKKKQVLYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTAYAMKLRKPMIY 551

Query: 1282 GETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDLPEATVVIQISSQGASRRQEAQRLG 1461
            G TSH ER  +L +F+   +  T+FLSKVGD SID+PEA V+IQISS   SRRQEAQRLG
Sbjct: 552  GATSHAERTRILYQFKNSPEVNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLG 611

Query: 1462 RILRPKIRNEQGMLSGG---TAIFYSLVSQDTAEMLYATKRQKFLVNQGYTFNTLTNFPP 1632
            RILR K +++  M  G     A FYSLVS DT EM Y+TKRQ+FL++QGY+F  +T+ PP
Sbjct: 612  RILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPP 671

Query: 1633 PEGRGDLIFARPEVQAQLLKEALQD-------KSMEE----------------------- 1722
            PE   +L +   + Q +LL + L         + +EE                       
Sbjct: 672  PEEGPNLSYYTLDEQLELLGKVLNAGDDMIGVEHLEEDSDGKALLKARRSAGSMSAFSGA 731

Query: 1723 ----------VPKEQPKKRKPDAGRHDLFRKRYQ 1794
                        K  PKK K  + RH LF+KRYQ
Sbjct: 732  GGRVYLEYSTKGKGAPKKPKDPSKRHHLFKKRYQ 765


>ref|XP_002509835.1| rad25/xp-B DNA repair helicase, putative [Ricinus communis]
            gi|223549734|gb|EEF51222.1| rad25/xp-B DNA repair
            helicase, putative [Ricinus communis]
          Length = 768

 Score =  520 bits (1338), Expect = e-144
 Identities = 300/649 (46%), Positives = 387/649 (59%), Gaps = 59/649 (9%)
 Frame = +1

Query: 1    KQAYDFCIAIAEPESRLENFHEYKITAASLYGAVSAGMPPQDIVKYLDFLSKTHVPDSIR 180
            KQAYDF IAIAEP  R E+ HEY +T  SLY AVS G+  + I+  L+ LSKT +P  + 
Sbjct: 83   KQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKTKLPKEMI 142

Query: 181  RFIKECTENVXXXXXXXXXXXFIIEG-IPSAI-----DRVYSRI---------------- 294
             FI   T N            +++E   P  +     D V SR                 
Sbjct: 143  DFIHGSTANYGKVKLVLKKNRYLVESPFPEVLKRLLKDEVISRARLVSEAHVNGSFTISK 202

Query: 295  -------SH----------AVLERKQISNTHAVLEMNPSKVVEARATC--RTINYPLVEE 417
                   SH          A  E K+   TH+  E++PS+V   +  C    +NYP++EE
Sbjct: 203  TAGEIGTSHDGLLNEAELAAAAEEKE---THS-FEVDPSQVENVKQRCLPNALNYPMLEE 258

Query: 418  YDYKNDTGCPTLDIKLDKKAQLRPYQMKSVDKMFVNGKARSGVIVLPCGAGKSLTGVYAA 597
            YD++NDT  P LD++L   AQ RPYQ KS+ KMF NG+ARSG+IVLPCGAGKSL GV AA
Sbjct: 259  YDFRNDTVNPDLDMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAA 318

Query: 598  VRLGKPVLCFANTSVSVEQWAFQFETWTNLHASKVQSVTSDTKSKDFNAKADIIVTTYSM 777
             R+ K  LC A  +VSV+QWAFQF+ W+ +   ++   TSD+K + F   A ++VTTY+M
Sbjct: 319  CRIKKSCLCLATNAVSVDQWAFQFQLWSTIREEQICRFTSDSKER-FQGNAGVVVTTYNM 377

Query: 778  YGYTGQRSKDSEAIMNAIEGREWGLILMDEVHVVPAKNFREAVAKTKSHCKLGLTATLLR 957
              + G+RS++SE I+  I  REWGL+LMDEVHVVPA  FR+ ++ TKSHCKLGLTATL+R
Sbjct: 378  VAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISLTKSHCKLGLTATLVR 437

Query: 958  EDDAIDDLEFIIGPKLYEANWQDLVQAGYLAKVTCFEVLCPMTKDFLREYLDLFLHGSNN 1137
            ED+ I DL F+IGPKLYEANW DLV+ G++A V C EV CPMTK+F  EYL         
Sbjct: 438  EDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL--------- 488

Query: 1138 WHGREEKRSVQHTLYGVNPMKLMACEYLIKYHE---------------AXXXXXXXLNKP 1272
               ++E    +  LY +NP K  ACE+LI++HE               A       L KP
Sbjct: 489  ---KKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKP 545

Query: 1273 MIKGETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDLPEATVVIQISSQGASRRQEAQ 1452
            MI G TSH ER  +L+ F+T     TVFLSKVGD SID+PEA V+IQISS   SRRQEAQ
Sbjct: 546  MIYGATSHAERTKILQAFKTSKDVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQ 605

Query: 1453 RLGRILRPKIRNEQGMLSGG---TAIFYSLVSQDTAEMLYATKRQKFLVNQGYTFNTLTN 1623
            RLGRILR K +++  M  G     A FYSLVS DT EM Y+TKRQ+FL++QGY+F  +T+
Sbjct: 606  RLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITS 665

Query: 1624 FPPPEGRGDLIFARPEVQAQLLKEALQDKSMEEVPKEQPKKRKPDAGRH 1770
             PP +   DL +   + Q  LL + L +   + V  EQ ++   D   H
Sbjct: 666  LPPLDSGPDLSYYHLDEQLALLAKVL-NAGDDAVGLEQLEEDADDIALH 713


>ref|XP_006584727.1| PREDICTED: DNA repair helicase XPB1-like isoform X2 [Glycine max]
          Length = 769

 Score =  519 bits (1337), Expect = e-144
 Identities = 294/623 (47%), Positives = 377/623 (60%), Gaps = 56/623 (8%)
 Frame = +1

Query: 1    KQAYDFCIAIAEPESRLENFHEYKITAASLYGAVSAGMPPQDIVKYLDFLSKTHVPDSIR 180
            K AYDF IAIAEP  R E+ HEY +T  SLY AVS G+  + ++  L+ LSKT +P  + 
Sbjct: 84   KHAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETVINVLNKLSKTKLPKEMI 143

Query: 181  RFIKECTENVXXXXXXXXXXXFIIEG-IPSAI-----DRVYSRISHAVLERK-------- 318
            +FI + T N            + IE   P  +     D   SR S  + E          
Sbjct: 144  KFIHDSTANYGKVKLVLKKNRYFIESPFPEVLKTLLRDETISR-SRLISENVNGDGFTIS 202

Query: 319  ----QISNTHAVL------------------EMNPSKVVEARATC--RTINYPLVEEYDY 426
                +I  TH  L                  E++PS+V   +  C    +NYP++EEYD+
Sbjct: 203  KAAGEIEGTHDELLNEAEVAAVAEEKEAHSFEIDPSQVENVKQRCLPNALNYPMLEEYDF 262

Query: 427  KNDTGCPTLDIKLDKKAQLRPYQMKSVDKMFVNGKARSGVIVLPCGAGKSLTGVYAAVRL 606
            +NDT  P LD++L  +AQ RPYQ KS+ KMF NG+ARSG+IVLPCGAGKSL GV AA R+
Sbjct: 263  RNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRI 322

Query: 607  GKPVLCFANTSVSVEQWAFQFETWTNLHASKVQSVTSDTKSKDFNAKADIIVTTYSMYGY 786
             K  LC A  +VSV+QWAFQF+ W+ +   ++   TSD+K + F   A ++VTTY+M  +
Sbjct: 323  KKSCLCLATNAVSVDQWAFQFKLWSTIREEQICRFTSDSKER-FRGNAGVVVTTYNMVAF 381

Query: 787  TGQRSKDSEAIMNAIEGREWGLILMDEVHVVPAKNFREAVAKTKSHCKLGLTATLLREDD 966
             G+RS++SE I+  I  REWGL+LMDEVHVVPA  FR+ ++ TKSHCKLGLTATL+RED+
Sbjct: 382  GGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVREDE 441

Query: 967  AIDDLEFIIGPKLYEANWQDLVQAGYLAKVTCFEVLCPMTKDFLREYLDLFLHGSNNWHG 1146
             I DL F+IGPKLYEANW DLV+ G++A V C EV CPMTK+F  EYL            
Sbjct: 442  RITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL------------ 489

Query: 1147 REEKRSVQHTLYGVNPMKLMACEYLIKYHE---------------AXXXXXXXLNKPMIK 1281
            ++E    +  LY +NP K  ACE+LI +HE               A       L KPMI 
Sbjct: 490  KKENSKKRQALYVMNPNKFRACEFLINFHEGTRGDKIIVFADNLFALTEYAMKLRKPMIY 549

Query: 1282 GETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDLPEATVVIQISSQGASRRQEAQRLG 1461
            G TSH ER  +L+ F+T     T+FLSKVGD SID+PEA V+IQISS   SRRQEAQRLG
Sbjct: 550  GATSHVERTKILQAFKTSKDINTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLG 609

Query: 1462 RILRPKIRNEQGMLSGG---TAIFYSLVSQDTAEMLYATKRQKFLVNQGYTFNTLTNFPP 1632
            RILR K + E  M  G     A FYSLVS DT EM Y+TKRQ+FL++QGY+F  +T+ PP
Sbjct: 610  RILRAKGKLEDRMAGGKEEYNAFFYSLVSIDTQEMYYSTKRQQFLIDQGYSFKVITSLPP 669

Query: 1633 PEGRGDLIFARPEVQAQLLKEAL 1701
            P+   +L + R E Q  LL + L
Sbjct: 670  PDEGPNLSYHRLEDQLALLGKVL 692


>ref|XP_006580561.1| PREDICTED: DNA repair helicase XPB1-like isoform X2 [Glycine max]
          Length = 769

 Score =  519 bits (1337), Expect = e-144
 Identities = 294/623 (47%), Positives = 377/623 (60%), Gaps = 56/623 (8%)
 Frame = +1

Query: 1    KQAYDFCIAIAEPESRLENFHEYKITAASLYGAVSAGMPPQDIVKYLDFLSKTHVPDSIR 180
            K AYDF IAIAEP  R E+ HEY +T  SLY AVS G+  + ++  L+ LSKT +P  + 
Sbjct: 84   KHAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETVISVLNKLSKTKLPKEMV 143

Query: 181  RFIKECTENVXXXXXXXXXXXFIIEG-IPSAI-----DRVYSRISHAVLERK-------- 318
            +FI + T N            + IE   P  +     D   SR S  + E          
Sbjct: 144  KFIHDSTANYGKVKLVLKKNRYFIESPFPEVLKTLLRDETISR-SRIISENVNGDGFTIS 202

Query: 319  ----QISNTHAVL------------------EMNPSKVVEARATC--RTINYPLVEEYDY 426
                +I  TH  L                  E++PS+V   +  C    +NYP++EEYD+
Sbjct: 203  KAAGEIEGTHDELLNEAEVAAVAEEKEAHSFEIDPSQVENVKQRCLPNALNYPMLEEYDF 262

Query: 427  KNDTGCPTLDIKLDKKAQLRPYQMKSVDKMFVNGKARSGVIVLPCGAGKSLTGVYAAVRL 606
            +NDT  P LD++L  +AQ RPYQ KS+ KMF NG+ARSG+IVLPCGAGKSL GV AA R+
Sbjct: 263  RNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRI 322

Query: 607  GKPVLCFANTSVSVEQWAFQFETWTNLHASKVQSVTSDTKSKDFNAKADIIVTTYSMYGY 786
             K  LC A  +VSV+QWAFQF+ W+ +   ++   TSD+K + F   A ++VTTY+M  +
Sbjct: 323  KKSCLCLATNAVSVDQWAFQFKLWSTIREEQICRFTSDSKER-FRGNAGVVVTTYNMVAF 381

Query: 787  TGQRSKDSEAIMNAIEGREWGLILMDEVHVVPAKNFREAVAKTKSHCKLGLTATLLREDD 966
             G+RS++SE I+  I  REWGL+LMDEVHVVPA  FR+ ++ TKSHCKLGLTATL+RED+
Sbjct: 382  GGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVREDE 441

Query: 967  AIDDLEFIIGPKLYEANWQDLVQAGYLAKVTCFEVLCPMTKDFLREYLDLFLHGSNNWHG 1146
             I DL F+IGPKLYEANW DLV+ G++A V C EV CPMTK+F  EYL            
Sbjct: 442  RITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL------------ 489

Query: 1147 REEKRSVQHTLYGVNPMKLMACEYLIKYHE---------------AXXXXXXXLNKPMIK 1281
            ++E    +  LY +NP K  ACE+LI +HE               A       L KPMI 
Sbjct: 490  KKENSKKRQALYVMNPNKFRACEFLINFHERTRGDKIIVFADNLFALTEYAMKLRKPMIY 549

Query: 1282 GETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDLPEATVVIQISSQGASRRQEAQRLG 1461
            G TSH ER  +L+ F+T     T+FLSKVGD SID+PEA V+IQISS   SRRQEAQRLG
Sbjct: 550  GATSHVERTKILQAFKTSKDINTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLG 609

Query: 1462 RILRPKIRNEQGMLSGG---TAIFYSLVSQDTAEMLYATKRQKFLVNQGYTFNTLTNFPP 1632
            RILR K + E  M  G     A FYSLVS DT EM Y+TKRQ+FL++QGY+F  +T+ PP
Sbjct: 610  RILRAKGKLEDRMAGGKEEYNAFFYSLVSIDTQEMYYSTKRQQFLIDQGYSFKVITSLPP 669

Query: 1633 PEGRGDLIFARPEVQAQLLKEAL 1701
            P+   +L + R E Q  LL + L
Sbjct: 670  PDEGPNLSYHRLEDQLALLGKVL 692


>ref|XP_004245582.1| PREDICTED: DNA repair helicase XPB1-like [Solanum lycopersicum]
          Length = 768

 Score =  519 bits (1337), Expect = e-144
 Identities = 291/623 (46%), Positives = 378/623 (60%), Gaps = 56/623 (8%)
 Frame = +1

Query: 1    KQAYDFCIAIAEPESRLENFHEYKITAASLYGAVSAGMPPQDIVKYLDFLSKTHVPDSIR 180
            KQAYDF IAIAEP  R E+ HEY +T  SLY AVS G+  + I+  L  LSKT +P  + 
Sbjct: 87   KQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIIAVLSKLSKTKLPKEMI 146

Query: 181  RFIKECTENVXXXXXXXXXXXFIIEG-IPSAIDRVYS-------RISHAVLERK------ 318
             FI   T N            + IE   P  + R+ +       RIS   +  K      
Sbjct: 147  DFIHASTANYGKVKLVLKKNRYFIESPFPEVLKRLLADDAIGKARISSEGMHGKDGFTVS 206

Query: 319  ----QISNTHAVL------------------EMNPSKVVEARATC--RTINYPLVEEYDY 426
                +I   H  L                  E++P++V   +  C    +NYP++EEYD+
Sbjct: 207  KPVNEIEGGHDELINEVDVAAAAEEKETHSFEIDPAQVENVKQRCLPNALNYPMMEEYDF 266

Query: 427  KNDTGCPTLDIKLDKKAQLRPYQMKSVDKMFVNGKARSGVIVLPCGAGKSLTGVYAAVRL 606
            +NDT  P LD++L  +AQ RPYQ KS+ KMF NG+ARSG+IVLPCGAGKSL GV AA R+
Sbjct: 267  RNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAASRI 326

Query: 607  GKPVLCFANTSVSVEQWAFQFETWTNLHASKVQSVTSDTKSKDFNAKADIIVTTYSMYGY 786
             K  LC A  +VSV+QWAFQF+ W+ +   ++   TSD+K + F     ++VTTY+M  +
Sbjct: 327  KKSCLCLATNAVSVDQWAFQFKLWSTIREEQICRFTSDSKER-FRGNVGVVVTTYNMVAF 385

Query: 787  TGQRSKDSEAIMNAIEGREWGLILMDEVHVVPAKNFREAVAKTKSHCKLGLTATLLREDD 966
             G+RS++SE I+  I  REWGL+LMDEVHVVPA  FR+ ++ TKSHCKLGLTATL+RED+
Sbjct: 386  GGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVREDE 445

Query: 967  AIDDLEFIIGPKLYEANWQDLVQAGYLAKVTCFEVLCPMTKDFLREYLDLFLHGSNNWHG 1146
             I DL F+IGPKLYEANW DLV+ G++A V C EV CPMTK+F  EYL            
Sbjct: 446  RITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL------------ 493

Query: 1147 REEKRSVQHTLYGVNPMKLMACEYLIKYHE---------------AXXXXXXXLNKPMIK 1281
            ++E    +  LY +NP K  ACE+LI++HE               A       L KPMI 
Sbjct: 494  KKENSKKRQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIY 553

Query: 1282 GETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDLPEATVVIQISSQGASRRQEAQRLG 1461
            G TSH ER  +L+ F+T  +  T+FLSKVGD SID+PEA V+IQISS   SRRQEAQRLG
Sbjct: 554  GATSHVERTKILEAFKTSKEVNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLG 613

Query: 1462 RILRPKIRNEQGMLSGG---TAIFYSLVSQDTAEMLYATKRQKFLVNQGYTFNTLTNFPP 1632
            RILR K +++  M  G     A FYSLVS DT EM Y+TKRQ+FL++QGY+F  +T+ PP
Sbjct: 614  RILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPP 673

Query: 1633 PEGRGDLIFARPEVQAQLLKEAL 1701
             +   +L + R + Q QLL + L
Sbjct: 674  SDSGSELSYHRLDEQLQLLGKVL 696


>ref|XP_003532875.1| PREDICTED: DNA repair helicase XPB1-like isoform X1 [Glycine max]
          Length = 768

 Score =  519 bits (1337), Expect = e-144
 Identities = 294/623 (47%), Positives = 377/623 (60%), Gaps = 56/623 (8%)
 Frame = +1

Query: 1    KQAYDFCIAIAEPESRLENFHEYKITAASLYGAVSAGMPPQDIVKYLDFLSKTHVPDSIR 180
            K AYDF IAIAEP  R E+ HEY +T  SLY AVS G+  + ++  L+ LSKT +P  + 
Sbjct: 83   KHAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETVINVLNKLSKTKLPKEMI 142

Query: 181  RFIKECTENVXXXXXXXXXXXFIIEG-IPSAI-----DRVYSRISHAVLERK-------- 318
            +FI + T N            + IE   P  +     D   SR S  + E          
Sbjct: 143  KFIHDSTANYGKVKLVLKKNRYFIESPFPEVLKTLLRDETISR-SRLISENVNGDGFTIS 201

Query: 319  ----QISNTHAVL------------------EMNPSKVVEARATC--RTINYPLVEEYDY 426
                +I  TH  L                  E++PS+V   +  C    +NYP++EEYD+
Sbjct: 202  KAAGEIEGTHDELLNEAEVAAVAEEKEAHSFEIDPSQVENVKQRCLPNALNYPMLEEYDF 261

Query: 427  KNDTGCPTLDIKLDKKAQLRPYQMKSVDKMFVNGKARSGVIVLPCGAGKSLTGVYAAVRL 606
            +NDT  P LD++L  +AQ RPYQ KS+ KMF NG+ARSG+IVLPCGAGKSL GV AA R+
Sbjct: 262  RNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRI 321

Query: 607  GKPVLCFANTSVSVEQWAFQFETWTNLHASKVQSVTSDTKSKDFNAKADIIVTTYSMYGY 786
             K  LC A  +VSV+QWAFQF+ W+ +   ++   TSD+K + F   A ++VTTY+M  +
Sbjct: 322  KKSCLCLATNAVSVDQWAFQFKLWSTIREEQICRFTSDSKER-FRGNAGVVVTTYNMVAF 380

Query: 787  TGQRSKDSEAIMNAIEGREWGLILMDEVHVVPAKNFREAVAKTKSHCKLGLTATLLREDD 966
             G+RS++SE I+  I  REWGL+LMDEVHVVPA  FR+ ++ TKSHCKLGLTATL+RED+
Sbjct: 381  GGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVREDE 440

Query: 967  AIDDLEFIIGPKLYEANWQDLVQAGYLAKVTCFEVLCPMTKDFLREYLDLFLHGSNNWHG 1146
             I DL F+IGPKLYEANW DLV+ G++A V C EV CPMTK+F  EYL            
Sbjct: 441  RITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL------------ 488

Query: 1147 REEKRSVQHTLYGVNPMKLMACEYLIKYHE---------------AXXXXXXXLNKPMIK 1281
            ++E    +  LY +NP K  ACE+LI +HE               A       L KPMI 
Sbjct: 489  KKENSKKRQALYVMNPNKFRACEFLINFHEGTRGDKIIVFADNLFALTEYAMKLRKPMIY 548

Query: 1282 GETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDLPEATVVIQISSQGASRRQEAQRLG 1461
            G TSH ER  +L+ F+T     T+FLSKVGD SID+PEA V+IQISS   SRRQEAQRLG
Sbjct: 549  GATSHVERTKILQAFKTSKDINTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLG 608

Query: 1462 RILRPKIRNEQGMLSGG---TAIFYSLVSQDTAEMLYATKRQKFLVNQGYTFNTLTNFPP 1632
            RILR K + E  M  G     A FYSLVS DT EM Y+TKRQ+FL++QGY+F  +T+ PP
Sbjct: 609  RILRAKGKLEDRMAGGKEEYNAFFYSLVSIDTQEMYYSTKRQQFLIDQGYSFKVITSLPP 668

Query: 1633 PEGRGDLIFARPEVQAQLLKEAL 1701
            P+   +L + R E Q  LL + L
Sbjct: 669  PDEGPNLSYHRLEDQLALLGKVL 691


>ref|XP_003525384.1| PREDICTED: DNA repair helicase XPB1-like isoform X1 [Glycine max]
          Length = 768

 Score =  519 bits (1337), Expect = e-144
 Identities = 294/623 (47%), Positives = 377/623 (60%), Gaps = 56/623 (8%)
 Frame = +1

Query: 1    KQAYDFCIAIAEPESRLENFHEYKITAASLYGAVSAGMPPQDIVKYLDFLSKTHVPDSIR 180
            K AYDF IAIAEP  R E+ HEY +T  SLY AVS G+  + ++  L+ LSKT +P  + 
Sbjct: 83   KHAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETVISVLNKLSKTKLPKEMV 142

Query: 181  RFIKECTENVXXXXXXXXXXXFIIEG-IPSAI-----DRVYSRISHAVLERK-------- 318
            +FI + T N            + IE   P  +     D   SR S  + E          
Sbjct: 143  KFIHDSTANYGKVKLVLKKNRYFIESPFPEVLKTLLRDETISR-SRIISENVNGDGFTIS 201

Query: 319  ----QISNTHAVL------------------EMNPSKVVEARATC--RTINYPLVEEYDY 426
                +I  TH  L                  E++PS+V   +  C    +NYP++EEYD+
Sbjct: 202  KAAGEIEGTHDELLNEAEVAAVAEEKEAHSFEIDPSQVENVKQRCLPNALNYPMLEEYDF 261

Query: 427  KNDTGCPTLDIKLDKKAQLRPYQMKSVDKMFVNGKARSGVIVLPCGAGKSLTGVYAAVRL 606
            +NDT  P LD++L  +AQ RPYQ KS+ KMF NG+ARSG+IVLPCGAGKSL GV AA R+
Sbjct: 262  RNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRI 321

Query: 607  GKPVLCFANTSVSVEQWAFQFETWTNLHASKVQSVTSDTKSKDFNAKADIIVTTYSMYGY 786
             K  LC A  +VSV+QWAFQF+ W+ +   ++   TSD+K + F   A ++VTTY+M  +
Sbjct: 322  KKSCLCLATNAVSVDQWAFQFKLWSTIREEQICRFTSDSKER-FRGNAGVVVTTYNMVAF 380

Query: 787  TGQRSKDSEAIMNAIEGREWGLILMDEVHVVPAKNFREAVAKTKSHCKLGLTATLLREDD 966
             G+RS++SE I+  I  REWGL+LMDEVHVVPA  FR+ ++ TKSHCKLGLTATL+RED+
Sbjct: 381  GGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVREDE 440

Query: 967  AIDDLEFIIGPKLYEANWQDLVQAGYLAKVTCFEVLCPMTKDFLREYLDLFLHGSNNWHG 1146
             I DL F+IGPKLYEANW DLV+ G++A V C EV CPMTK+F  EYL            
Sbjct: 441  RITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL------------ 488

Query: 1147 REEKRSVQHTLYGVNPMKLMACEYLIKYHE---------------AXXXXXXXLNKPMIK 1281
            ++E    +  LY +NP K  ACE+LI +HE               A       L KPMI 
Sbjct: 489  KKENSKKRQALYVMNPNKFRACEFLINFHERTRGDKIIVFADNLFALTEYAMKLRKPMIY 548

Query: 1282 GETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDLPEATVVIQISSQGASRRQEAQRLG 1461
            G TSH ER  +L+ F+T     T+FLSKVGD SID+PEA V+IQISS   SRRQEAQRLG
Sbjct: 549  GATSHVERTKILQAFKTSKDINTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLG 608

Query: 1462 RILRPKIRNEQGMLSGG---TAIFYSLVSQDTAEMLYATKRQKFLVNQGYTFNTLTNFPP 1632
            RILR K + E  M  G     A FYSLVS DT EM Y+TKRQ+FL++QGY+F  +T+ PP
Sbjct: 609  RILRAKGKLEDRMAGGKEEYNAFFYSLVSIDTQEMYYSTKRQQFLIDQGYSFKVITSLPP 668

Query: 1633 PEGRGDLIFARPEVQAQLLKEAL 1701
            P+   +L + R E Q  LL + L
Sbjct: 669  PDEGPNLSYHRLEDQLALLGKVL 691


>ref|XP_006343950.1| PREDICTED: DNA repair helicase XPB1-like [Solanum tuberosum]
          Length = 768

 Score =  519 bits (1336), Expect = e-144
 Identities = 291/623 (46%), Positives = 378/623 (60%), Gaps = 56/623 (8%)
 Frame = +1

Query: 1    KQAYDFCIAIAEPESRLENFHEYKITAASLYGAVSAGMPPQDIVKYLDFLSKTHVPDSIR 180
            KQAYDF IAIAEP  R E+ HEY +T  SLY AVS G+  + I+  L  LSKT +P  + 
Sbjct: 87   KQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIIAVLSKLSKTKLPKEMI 146

Query: 181  RFIKECTENVXXXXXXXXXXXFIIEG-IPSAIDRVYS-------RISHAVLERK------ 318
             FI   T N            + IE   P  + R+ +       RIS   +  K      
Sbjct: 147  DFIHASTANYGKVKLVLKKNRYFIESPFPEVLKRLLADDAIGKARISSEGMHGKDGFTVS 206

Query: 319  ----QISNTHAVL------------------EMNPSKVVEARATC--RTINYPLVEEYDY 426
                +I   H  L                  E++P++V   +  C    +NYP++EEYD+
Sbjct: 207  KPVNEIEGGHDELINEVDVAAAAEEKETHSFEIDPAQVENVKQRCLPNALNYPMMEEYDF 266

Query: 427  KNDTGCPTLDIKLDKKAQLRPYQMKSVDKMFVNGKARSGVIVLPCGAGKSLTGVYAAVRL 606
            +NDT  P LD++L  +AQ RPYQ KS+ KMF NG+ARSG+IVLPCGAGKSL GV AA R+
Sbjct: 267  RNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAASRI 326

Query: 607  GKPVLCFANTSVSVEQWAFQFETWTNLHASKVQSVTSDTKSKDFNAKADIIVTTYSMYGY 786
             K  LC A  +VSV+QWAFQF+ W+ +   ++   TSD+K + F     ++VTTY+M  +
Sbjct: 327  KKSCLCLATNAVSVDQWAFQFKLWSTIREEQICRFTSDSKER-FRGNVGVVVTTYNMVAF 385

Query: 787  TGQRSKDSEAIMNAIEGREWGLILMDEVHVVPAKNFREAVAKTKSHCKLGLTATLLREDD 966
             G+RS++SE I+  I  REWGL+LMDEVHVVPA  FR+ ++ TKSHCKLGLTATL+RED+
Sbjct: 386  GGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVREDE 445

Query: 967  AIDDLEFIIGPKLYEANWQDLVQAGYLAKVTCFEVLCPMTKDFLREYLDLFLHGSNNWHG 1146
             I DL F+IGPKLYEANW DLV+ G++A V C EV CPMTK+F  EYL            
Sbjct: 446  RITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL------------ 493

Query: 1147 REEKRSVQHTLYGVNPMKLMACEYLIKYHE---------------AXXXXXXXLNKPMIK 1281
            ++E    +  LY +NP K  ACE+LI++HE               A       L KPMI 
Sbjct: 494  KKENSKKRQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALVEYAMKLRKPMIY 553

Query: 1282 GETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDLPEATVVIQISSQGASRRQEAQRLG 1461
            G TSH ER  +L+ F+T  +  T+FLSKVGD SID+PEA V+IQISS   SRRQEAQRLG
Sbjct: 554  GATSHVERTKILEAFKTSKEVNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLG 613

Query: 1462 RILRPKIRNEQGMLSGG---TAIFYSLVSQDTAEMLYATKRQKFLVNQGYTFNTLTNFPP 1632
            RILR K +++  M  G     A FYSLVS DT EM Y+TKRQ+FL++QGY+F  +T+ PP
Sbjct: 614  RILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPP 673

Query: 1633 PEGRGDLIFARPEVQAQLLKEAL 1701
             +   +L + R + Q QLL + L
Sbjct: 674  SDSGSELSYHRLDDQLQLLGKVL 696


>ref|XP_006405358.1| hypothetical protein EUTSA_v10027651mg [Eutrema salsugineum]
            gi|557106496|gb|ESQ46811.1| hypothetical protein
            EUTSA_v10027651mg [Eutrema salsugineum]
          Length = 769

 Score =  519 bits (1336), Expect = e-144
 Identities = 293/627 (46%), Positives = 375/627 (59%), Gaps = 60/627 (9%)
 Frame = +1

Query: 1    KQAYDFCIAIAEPESRLENFHEYKITAASLYGAVSAGMPPQDIVKYLDFLSKTHVPDSIR 180
            KQAYDF IAIAEP  R E+ HEY +T  SLY AVS G+  + I+  L+ LSKT +P  + 
Sbjct: 85   KQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKTKLPKEMI 144

Query: 181  RFIKECTENVXXXXXXXXXXXFIIEG-IPSAIDRVYSRISHAVLERKQISN--------- 330
             FI   T N            + IE   P  +  +   +S  V+ R + S+         
Sbjct: 145  DFIYASTANYGKVKLVLKKNRYFIESPFPEVLKTL---LSDGVISRARFSSEPYYGGDGF 201

Query: 331  ------------------------------THAVLEMNPSKVVEARATC--RTINYPLVE 414
                                          TH+  E++P++V   +  C    +NYP++E
Sbjct: 202  TVGKTSGELEAGPGELLNEAELAAAAEEKETHS-FEIDPAQVENVKQRCLPSELNYPMLE 260

Query: 415  EYDYKNDTGCPTLDIKLDKKAQLRPYQMKSVDKMFVNGKARSGVIVLPCGAGKSLTGVYA 594
            EYD++ND   P LDI+L   AQ RPYQ KS+ KMF NG+ARSG+IVLPCGAGKSL GV A
Sbjct: 261  EYDFRNDNVNPDLDIELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSA 320

Query: 595  AVRLGKPVLCFANTSVSVEQWAFQFETWTNLHASKVQSVTSDTKSKDFNAKADIIVTTYS 774
            A R+ K VLC A  +VSV+QWAFQF+ W+ +   ++   TSD+K K F   A ++VTTY+
Sbjct: 321  AARIKKSVLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKEK-FRGNAGVVVTTYN 379

Query: 775  MYGYTGQRSKDSEAIMNAIEGREWGLILMDEVHVVPAKNFREAVAKTKSHCKLGLTATLL 954
            M  + G+RS+DS+ I+  +  REWGL+LMDEVHVVPA  FR+ ++ TKSHCKLGLTATL+
Sbjct: 380  MVAFGGKRSEDSQMIIEDMRNREWGLLLMDEVHVVPANMFRKVISITKSHCKLGLTATLV 439

Query: 955  REDDAIDDLEFIIGPKLYEANWQDLVQAGYLAKVTCFEVLCPMTKDFLREYLDLFLHGSN 1134
            RED+ I DL F+IGPKLYEANW DLV+ G++A V C EV CPMTK+F  EYL        
Sbjct: 440  REDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL-------- 491

Query: 1135 NWHGREEKRSVQHTLYGVNPMKLMACEYLIKYHE---------------AXXXXXXXLNK 1269
                ++E    +  LY +NP K  ACE+LI++HE               A       L K
Sbjct: 492  ----KKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRK 547

Query: 1270 PMIKGETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDLPEATVVIQISSQGASRRQEA 1449
            PMI G TSH ER  +L+ F+T     TVFLSKVGD SID+PEA V+IQISS   SRRQEA
Sbjct: 548  PMIYGATSHIERTKILEAFKTSKDLNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEA 607

Query: 1450 QRLGRILRPKIRNEQGMLSGG---TAIFYSLVSQDTAEMLYATKRQKFLVNQGYTFNTLT 1620
            QRLGRILR K + E  M  G     A FYSLVS DT EM Y+TKRQ+FL++QGY+F  +T
Sbjct: 608  QRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVIT 667

Query: 1621 NFPPPEGRGDLIFARPEVQAQLLKEAL 1701
            + PPP+    L +   E Q  LL + L
Sbjct: 668  SLPPPDAGASLSYHSQEEQLSLLAKVL 694


>gb|EOY24804.1| Xeroderma pigmentosum complementation group B 2 isoform 3, partial
            [Theobroma cacao]
          Length = 742

 Score =  519 bits (1336), Expect = e-144
 Identities = 292/624 (46%), Positives = 377/624 (60%), Gaps = 57/624 (9%)
 Frame = +1

Query: 1    KQAYDFCIAIAEPESRLENFHEYKITAASLYGAVSAGMPPQDIVKYLDFLSKTHVPDSIR 180
            KQAYDF IAIAEP  R E+ HEY +T  SLY AVS G+  + I+  L+ LSKT +P  + 
Sbjct: 106  KQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKTKLPKEMI 165

Query: 181  RFIKECTENVXXXXXXXXXXXFIIEG-IPSAID-----------RVYSRISHA------- 303
             FI   T N            + IE   P  +            R+ S  +H        
Sbjct: 166  DFIHASTANYGKVKLVLKKNRYFIESPFPEVLKKLLQDDVIARARIASESAHGSDGFTIS 225

Query: 304  ------------VLERKQIS------NTHAVLEMNPSKVVEARATC--RTINYPLVEEYD 423
                        +L   +++       THA  E++P++V   +  C    +NYP++EEYD
Sbjct: 226  KAAGEIGTGHDGLLNEAELAAATEEKETHA-FEIDPAQVENVKQRCLPNALNYPMLEEYD 284

Query: 424  YKNDTGCPTLDIKLDKKAQLRPYQMKSVDKMFVNGKARSGVIVLPCGAGKSLTGVYAAVR 603
            ++NDT  P LD++L   AQ RPYQ KS+ KMF NG+ARSG+IVLPCGAGKSL GV AA R
Sbjct: 285  FRNDTVNPDLDMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAASR 344

Query: 604  LGKPVLCFANTSVSVEQWAFQFETWTNLHASKVQSVTSDTKSKDFNAKADIIVTTYSMYG 783
            + K  LC A  +VSV+QWAFQF+ W+ +   ++   TSD+K + F   A ++VTTY+M  
Sbjct: 345  IKKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKER-FRGNAGVVVTTYNMVA 403

Query: 784  YTGQRSKDSEAIMNAIEGREWGLILMDEVHVVPAKNFREAVAKTKSHCKLGLTATLLRED 963
            + G+RS++SE I+  I  REWGL+LMDEVHVVPA  FR+ ++ TKSHCKLGLTATL+RED
Sbjct: 404  FGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISLTKSHCKLGLTATLVRED 463

Query: 964  DAIDDLEFIIGPKLYEANWQDLVQAGYLAKVTCFEVLCPMTKDFLREYLDLFLHGSNNWH 1143
            + I DL F+IGPKLYEANW DLV+ G++A V C EV CPMTK+F  EYL           
Sbjct: 464  ERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL----------- 512

Query: 1144 GREEKRSVQHTLYGVNPMKLMACEYLIKYHE---------------AXXXXXXXLNKPMI 1278
             ++E    +  LY +NP K  ACE+LI++HE               A       L KPMI
Sbjct: 513  -KKENSKKKQALYVMNPNKFRACEFLIRFHERERGDKIIVFADNLFALTEYAMKLRKPMI 571

Query: 1279 KGETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDLPEATVVIQISSQGASRRQEAQRL 1458
             G TSH ER  +L+ F+T     T+FLSKVGD SID+PEA V+IQISS   SRRQEAQRL
Sbjct: 572  YGATSHLERTKILQAFKTSRDVNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRL 631

Query: 1459 GRILRPKIRNEQGMLSGG---TAIFYSLVSQDTAEMLYATKRQKFLVNQGYTFNTLTNFP 1629
            GRILR K + E  M  G     A FYSLVS DT EM Y+TKRQ+FL++QGY+F  +T+ P
Sbjct: 632  GRILRAKGKLEDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLP 691

Query: 1630 PPEGRGDLIFARPEVQAQLLKEAL 1701
            PP+   DL +   + Q  LL + L
Sbjct: 692  PPDAGADLSYYHLDEQLALLGKVL 715


>gb|EOY24802.1| Xeroderma pigmentosum complementation group B 1 isoform 1 [Theobroma
            cacao]
          Length = 771

 Score =  519 bits (1336), Expect = e-144
 Identities = 292/624 (46%), Positives = 377/624 (60%), Gaps = 57/624 (9%)
 Frame = +1

Query: 1    KQAYDFCIAIAEPESRLENFHEYKITAASLYGAVSAGMPPQDIVKYLDFLSKTHVPDSIR 180
            KQAYDF IAIAEP  R E+ HEY +T  SLY AVS G+  + I+  L+ LSKT +P  + 
Sbjct: 85   KQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKTKLPKEMI 144

Query: 181  RFIKECTENVXXXXXXXXXXXFIIEG-IPSAID-----------RVYSRISHA------- 303
             FI   T N            + IE   P  +            R+ S  +H        
Sbjct: 145  DFIHASTANYGKVKLVLKKNRYFIESPFPEVLKKLLQDDVIARARIASESAHGSDGFTIS 204

Query: 304  ------------VLERKQIS------NTHAVLEMNPSKVVEARATC--RTINYPLVEEYD 423
                        +L   +++       THA  E++P++V   +  C    +NYP++EEYD
Sbjct: 205  KAAGEIGTGHDGLLNEAELAAATEEKETHA-FEIDPAQVENVKQRCLPNALNYPMLEEYD 263

Query: 424  YKNDTGCPTLDIKLDKKAQLRPYQMKSVDKMFVNGKARSGVIVLPCGAGKSLTGVYAAVR 603
            ++NDT  P LD++L   AQ RPYQ KS+ KMF NG+ARSG+IVLPCGAGKSL GV AA R
Sbjct: 264  FRNDTVNPDLDMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAASR 323

Query: 604  LGKPVLCFANTSVSVEQWAFQFETWTNLHASKVQSVTSDTKSKDFNAKADIIVTTYSMYG 783
            + K  LC A  +VSV+QWAFQF+ W+ +   ++   TSD+K + F   A ++VTTY+M  
Sbjct: 324  IKKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKER-FRGNAGVVVTTYNMVA 382

Query: 784  YTGQRSKDSEAIMNAIEGREWGLILMDEVHVVPAKNFREAVAKTKSHCKLGLTATLLRED 963
            + G+RS++SE I+  I  REWGL+LMDEVHVVPA  FR+ ++ TKSHCKLGLTATL+RED
Sbjct: 383  FGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISLTKSHCKLGLTATLVRED 442

Query: 964  DAIDDLEFIIGPKLYEANWQDLVQAGYLAKVTCFEVLCPMTKDFLREYLDLFLHGSNNWH 1143
            + I DL F+IGPKLYEANW DLV+ G++A V C EV CPMTK+F  EYL           
Sbjct: 443  ERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL----------- 491

Query: 1144 GREEKRSVQHTLYGVNPMKLMACEYLIKYHE---------------AXXXXXXXLNKPMI 1278
             ++E    +  LY +NP K  ACE+LI++HE               A       L KPMI
Sbjct: 492  -KKENSKKKQALYVMNPNKFRACEFLIRFHERERGDKIIVFADNLFALTEYAMKLRKPMI 550

Query: 1279 KGETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDLPEATVVIQISSQGASRRQEAQRL 1458
             G TSH ER  +L+ F+T     T+FLSKVGD SID+PEA V+IQISS   SRRQEAQRL
Sbjct: 551  YGATSHLERTKILQAFKTSRDVNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRL 610

Query: 1459 GRILRPKIRNEQGMLSGG---TAIFYSLVSQDTAEMLYATKRQKFLVNQGYTFNTLTNFP 1629
            GRILR K + E  M  G     A FYSLVS DT EM Y+TKRQ+FL++QGY+F  +T+ P
Sbjct: 611  GRILRAKGKLEDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLP 670

Query: 1630 PPEGRGDLIFARPEVQAQLLKEAL 1701
            PP+   DL +   + Q  LL + L
Sbjct: 671  PPDAGADLSYYHLDEQLALLGKVL 694


>ref|XP_002870639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297316475|gb|EFH46898.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 779

 Score =  519 bits (1336), Expect = e-144
 Identities = 291/627 (46%), Positives = 376/627 (59%), Gaps = 60/627 (9%)
 Frame = +1

Query: 1    KQAYDFCIAIAEPESRLENFHEYKITAASLYGAVSAGMPPQDIVKYLDFLSKTHVPDSIR 180
            KQAYDF IAIAEP  R E+ HEY +T  SLY AVS G+  + I+  L+ LSKT +P  + 
Sbjct: 96   KQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKTKLPKEMI 155

Query: 181  RFIKECTENVXXXXXXXXXXXFIIEG-IPSAIDRVYSRISHAVLERKQISN--------- 330
             FI   T N            + IE   P  + R+   +S  V+ R + S+         
Sbjct: 156  EFIHASTANYGKVKLVLKKNRYFIESPFPEVLKRL---LSDDVINRARFSSEPYYGGDGF 212

Query: 331  ------------------------------THAVLEMNPSKVVEARATC--RTINYPLVE 414
                                          TH+  E++P++V   +  C    +NYP++E
Sbjct: 213  TIGKTSGELEAGPGELLNEAELAAAAEEKETHS-FEIDPAQVENVKQRCLPNALNYPMLE 271

Query: 415  EYDYKNDTGCPTLDIKLDKKAQLRPYQMKSVDKMFVNGKARSGVIVLPCGAGKSLTGVYA 594
            EYD++ND   P LD++L   AQ RPYQ KS+ KMF NG+ARSG+IVLPCGAGKSL GV A
Sbjct: 272  EYDFRNDNVNPDLDMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSA 331

Query: 595  AVRLGKPVLCFANTSVSVEQWAFQFETWTNLHASKVQSVTSDTKSKDFNAKADIIVTTYS 774
            A R+ K  LC A  +VSV+QWAFQF+ W+ +   ++   TSD+K + F   A ++VTTY+
Sbjct: 332  AARIKKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKER-FRGNAGVVVTTYN 390

Query: 775  MYGYTGQRSKDSEAIMNAIEGREWGLILMDEVHVVPAKNFREAVAKTKSHCKLGLTATLL 954
            M  ++G+RS++SE I+  +  REWGL+LMDEVHVVPA  FR+ ++ TKSHCKLGLTATL+
Sbjct: 391  MVAFSGKRSEESEKIIEEMRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLV 450

Query: 955  REDDAIDDLEFIIGPKLYEANWQDLVQAGYLAKVTCFEVLCPMTKDFLREYLDLFLHGSN 1134
            RED+ I DL F+IGPKLYEANW DLV+ G++A V C EV CPMTK+F  EYL        
Sbjct: 451  REDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL-------- 502

Query: 1135 NWHGREEKRSVQHTLYGVNPMKLMACEYLIKYHE---------------AXXXXXXXLNK 1269
                ++E    +  LY +NP K  ACE+LI++HE               A       L K
Sbjct: 503  ----KKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRK 558

Query: 1270 PMIKGETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDLPEATVVIQISSQGASRRQEA 1449
            PMI G TSH ER  +L+ F+T     TVFLSKVGD SID+PEA V+IQISS   SRRQEA
Sbjct: 559  PMIYGATSHIERTKILEAFKTSKDVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEA 618

Query: 1450 QRLGRILRPKIRNEQGMLSGG---TAIFYSLVSQDTAEMLYATKRQKFLVNQGYTFNTLT 1620
            QRLGRILR K + E  M  G     A FYSLVS DT EM Y+TKRQ+FL++QGY+F  +T
Sbjct: 619  QRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVIT 678

Query: 1621 NFPPPEGRGDLIFARPEVQAQLLKEAL 1701
            + PPP+    L +   E Q  LL + L
Sbjct: 679  SLPPPDAGSSLSYHSQEEQLSLLGKVL 705


>tpg|DAA58033.1| TPA: hypothetical protein ZEAMMB73_851798 [Zea mays]
          Length = 767

 Score =  516 bits (1329), Expect = e-143
 Identities = 295/623 (47%), Positives = 375/623 (60%), Gaps = 56/623 (8%)
 Frame = +1

Query: 1    KQAYDFCIAIAEPESRLENFHEYKITAASLYGAVSAGMPPQDIVKYLDFLSKTHVPDSIR 180
            KQAYDF IAIAEP  R E+ HEY +T  SLY AVS G+    I+  L  LSKT +P  I 
Sbjct: 86   KQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETSTIISVLSKLSKTKLPREII 145

Query: 181  RFIKECTENVXXXXXXXXXXXFIIEG-IPSAI-----DRVYSRI-----------SHAVL 309
             FI   T N            + +E   P  +     D V SR            S  V 
Sbjct: 146  DFIHGSTANYGKVKLVLKKNRYFVESPFPEVLSTLLRDEVISRARISPEDSLGAPSFTVS 205

Query: 310  ERK-QISNTHAVL------------------EMNPSKVVEARATC--RTINYPLVEEYDY 426
            +   QI++ H  L                  E++PS+V   +  C    +NYP++EEYD+
Sbjct: 206  KTSGQIASGHEDLLNGMEIAAATEDKETHSFEIDPSQVENVKQRCLPNALNYPMLEEYDF 265

Query: 427  KNDTGCPTLDIKLDKKAQLRPYQMKSVDKMFVNGKARSGVIVLPCGAGKSLTGVYAAVRL 606
            +NDT  P LD++L  +A+ RPYQ KS+ KMF NG+ARSG+IVLPCGAGKSL GV AA R+
Sbjct: 266  RNDTVNPDLDMELKPQARPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRI 325

Query: 607  GKPVLCFANTSVSVEQWAFQFETWTNLHASKVQSVTSDTKSKDFNAKADIIVTTYSMYGY 786
             K  LC A  +VSV+QWAFQF+ W+ +    +   TSD K K F   A ++VTTY+M  +
Sbjct: 326  KKSCLCLATNAVSVDQWAFQFKLWSTIKDENISRFTSDNKEK-FTGMAGVVVTTYNMVAF 384

Query: 787  TGQRSKDSEAIMNAIEGREWGLILMDEVHVVPAKNFREAVAKTKSHCKLGLTATLLREDD 966
             G+RS+DSE I+  I  REWGL+LMDEVHVVPA  FR+ ++ TKSHCKLGLTATL+RED+
Sbjct: 385  GGKRSEDSEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVREDE 444

Query: 967  AIDDLEFIIGPKLYEANWQDLVQAGYLAKVTCFEVLCPMTKDFLREYLDLFLHGSNNWHG 1146
             I DL F+IGPKLYEANW DLV+ G++A V C EV CPMTK+F  EYL            
Sbjct: 445  RITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL------------ 492

Query: 1147 REEKRSVQHTLYGVNPMKLMACEYLIKYHE---------------AXXXXXXXLNKPMIK 1281
            ++E    +  LY +NP K  ACE+LI++HE               A       L KPMI 
Sbjct: 493  KKENSKKKQVLYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTTYAMKLRKPMIF 552

Query: 1282 GETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDLPEATVVIQISSQGASRRQEAQRLG 1461
            G TSH ER  +L +F+   +  T+FLSKVGD SID+PEA V+IQISS   SRRQEAQRLG
Sbjct: 553  GATSHAERTRILYQFKNSPEVNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLG 612

Query: 1462 RILRPKIRNEQGMLSGG---TAIFYSLVSQDTAEMLYATKRQKFLVNQGYTFNTLTNFPP 1632
            RILR K +++  M  G     A FYSLVS DT EM Y+TKRQ+FL++QGY+F  +T+ PP
Sbjct: 613  RILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPP 672

Query: 1633 PEGRGDLIFARPEVQAQLLKEAL 1701
             E   +L +   + Q +LL  AL
Sbjct: 673  AEEGPNLSYYTLDEQLELLSMAL 695


>ref|XP_006663357.1| PREDICTED: DNA repair helicase XPB1-like [Oryza brachyantha]
          Length = 918

 Score =  515 bits (1326), Expect = e-143
 Identities = 289/624 (46%), Positives = 376/624 (60%), Gaps = 57/624 (9%)
 Frame = +1

Query: 1    KQAYDFCIAIAEPESRLENFHEYKITAASLYGAVSAGMPPQDIVKYLDFLSKTHVPDSIR 180
            KQAYDF IAIAEP  R E+ HEY +T  SLY AVS G+    I+  +  LSKT +P  I 
Sbjct: 237  KQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETSTIISVMSKLSKTKLPREII 296

Query: 181  RFIKECTENVXXXXXXXXXXXFIIEG-IPSAI-----DRVYSRI---------------- 294
             FI   T N            + +E   P  +     D + SR                 
Sbjct: 297  DFIHASTANYGKVKLVLKKNRYFVESPFPEVLKTLLRDDIISRAWISPEDSVGAPSFTVS 356

Query: 295  ---------SHAVLERKQIS------NTHAVLEMNPSKVVEARATC--RTINYPLVEEYD 423
                        +L+  +++       TH+  E++PS+V   +  C    +N+P++EEYD
Sbjct: 357  KTAGEMASGHEDLLDGMELAAATEDKETHS-FEIDPSQVENVKQRCLPNALNFPMLEEYD 415

Query: 424  YKNDTGCPTLDIKLDKKAQLRPYQMKSVDKMFVNGKARSGVIVLPCGAGKSLTGVYAAVR 603
            ++NDT  P L+++L  +A+ RPYQ KS+ KMF NG+ARSG+IVLPCGAGKSL GV AA R
Sbjct: 416  FRNDTVNPDLEMELKPQARPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACR 475

Query: 604  LGKPVLCFANTSVSVEQWAFQFETWTNLHASKVQSVTSDTKSKDFNAKADIIVTTYSMYG 783
            + K  LC A  +VSV+QWAFQF+ W+ +    +   TSD K K F   A ++VTTY+M  
Sbjct: 476  IKKSCLCLATNAVSVDQWAFQFKLWSTIKDEHISRFTSDNKEK-FRGMAGVVVTTYNMVA 534

Query: 784  YTGQRSKDSEAIMNAIEGREWGLILMDEVHVVPAKNFREAVAKTKSHCKLGLTATLLRED 963
            + G+RS+DSE I+  I  REWGL+LMDEVHVVPA  FR+ ++ TKSHCKLGLTATL+RED
Sbjct: 535  FGGKRSEDSEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVRED 594

Query: 964  DAIDDLEFIIGPKLYEANWQDLVQAGYLAKVTCFEVLCPMTKDFLREYLDLFLHGSNNWH 1143
            + I DL F+IGPKLYEANW DLV+ G++A V C EV CPMTK+F  EYL           
Sbjct: 595  ERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL----------- 643

Query: 1144 GREEKRSVQHTLYGVNPMKLMACEYLIKYHE---------------AXXXXXXXLNKPMI 1278
             ++E    +  LY +NP K  ACE+LI++HE               A       L KPMI
Sbjct: 644  -KKENSKKKQVLYAMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTSYAMKLRKPMI 702

Query: 1279 KGETSHEERLLVLKRFRTEDKGYTVFLSKVGDTSIDLPEATVVIQISSQGASRRQEAQRL 1458
             G TSH ER  +L +F+      T+FLSKVGD SID+PEA V+IQISS   SRRQEAQRL
Sbjct: 703  YGSTSHVERTRILHQFKNSSDVNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRL 762

Query: 1459 GRILRPKIRNEQGMLSGG---TAIFYSLVSQDTAEMLYATKRQKFLVNQGYTFNTLTNFP 1629
            GRILR K +++  M  G     A FYSLVS DT EM Y+TKRQ+FL++QGY+F  +T+ P
Sbjct: 763  GRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLP 822

Query: 1630 PPEGRGDLIFARPEVQAQLLKEAL 1701
            PPE   +L +   E Q +LL ++L
Sbjct: 823  PPEELPNLKYYTLEEQLELLAQSL 846