BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00022223
         (1470 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006839002.1| hypothetical protein AMTR_s00002p00271910 [A...   174   1e-40
ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containi...   166   2e-38
ref|XP_004162510.1| PREDICTED: pentatricopeptide repeat-containi...   160   1e-36
ref|XP_004138834.1| PREDICTED: pentatricopeptide repeat-containi...   160   1e-36
gb|EXB51131.1| hypothetical protein L484_009095 [Morus notabilis]     159   4e-36
gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indi...   154   7e-35
ref|NP_001051249.1| Os03g0746400 [Oryza sativa Japonica Group] g...   154   7e-35
gb|ABF98845.1| pentatricopeptide, putative, expressed [Oryza sat...   154   7e-35
gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza ...   154   7e-35
ref|XP_006650574.1| PREDICTED: pentatricopeptide repeat-containi...   154   1e-34
ref|XP_002517094.1| pentatricopeptide repeat-containing protein,...   154   1e-34
ref|XP_006849933.1| hypothetical protein AMTR_s00022p00121040 [A...   152   3e-34
ref|XP_002520317.1| pentatricopeptide repeat-containing protein,...   152   3e-34
gb|EOY05751.1| Pentatricopeptide repeat superfamily protein, put...   152   5e-34
gb|EMJ22798.1| hypothetical protein PRUPE_ppa026817mg, partial [...   151   6e-34
ref|XP_003548477.1| PREDICTED: pentatricopeptide repeat-containi...   147   9e-33
ref|XP_003610755.1| Pentatricopeptide repeat-containing protein ...   147   9e-33
ref|XP_006468828.1| PREDICTED: pentatricopeptide repeat-containi...   145   4e-32
ref|XP_006448295.1| hypothetical protein CICLE_v10014876mg [Citr...   145   4e-32
ref|XP_002307458.2| pentatricopeptide repeat-containing family p...   145   4e-32

>ref|XP_006839002.1| hypothetical protein AMTR_s00002p00271910 [Amborella trichopoda]
            gi|548841508|gb|ERN01571.1| hypothetical protein
            AMTR_s00002p00271910 [Amborella trichopoda]
          Length = 569

 Score =  174 bits (440), Expect = 1e-40
 Identities = 107/395 (27%), Positives = 185/395 (46%), Gaps = 11/395 (2%)
 Frame = +3

Query: 156  VMSVMELVLNEWELGLRTFLWAKQQLNYKHTTEAYELIVHILGNAKKFDIMWQLLEEFKR 335
            V  V+    ++W   L  F WA +Q+ + ++TE Y+++V ILG  K+FD MW ++EE ++
Sbjct: 139  VNKVLRRYNDDWISALNFFRWASKQVGFVNSTETYDMMVDILGKMKQFDKMWDIVEEMRK 198

Query: 336  EGFLFRLKTLEVIFQSYVRAGSIEDSMEAFKRLCRLDDSVGTAALNSLIRVLCMENRKND 515
             G L  L T+  + +    AG  +D+++ F  +  L     T+++N ++  LC E     
Sbjct: 199  IGGLISLSTVSKMMRRLSGAGKWKDTIDVFYGIESLGLRKDTSSMNVVLDTLCKERNVER 258

Query: 516  CRLVLRRLKEKCPPNEMTYSILIHAFCEGNKLSEALNIFVEMVQNNIQPSLATYSYIIKA 695
             R +   L  + PPN  T+++LIH +C+  +L EA     EM      P + +Y+ +++A
Sbjct: 259  ARDLFLVLGREIPPNAHTFNVLIHGWCKAKRLEEAEWTMREMKGYGFNPCVISYTSLVEA 318

Query: 696  LSANKQTEFAQKLFDHMKA-----------YALRKFGRTPEVGEFLTDTGLLDEGPSNFD 842
              +    +  + L + M+A             +  FG+  E  E L     + +     D
Sbjct: 319  YCSLHDFQNVEALLNEMEAKGCPPSVVTYTVVMHAFGKAKETQEALRIYERMKKSGCTPD 378

Query: 843  SKAYXXXXXXXXXXXXXXXXXXXXXXMVKKGFTPSSKTYSSIFSHLCRKRKSREAFELFN 1022
            +  Y                      M   G TPS  TY+++ S +C   +  EA E+  
Sbjct: 379  ALFYNSLIFILGKAGRLRDARTIFEEMPNNGITPSLTTYNTLISVICEHSQEEEALEVLR 438

Query: 1023 IVVATSHFPDLQTLNTLIETFCSTGHVGIAMELWYMMQEKGYGCNRESYSVFIHGLCYNS 1202
             +  +S  PD++T   L++ FC  G + +   L + M  K    +  ++S+ +HGLC  S
Sbjct: 439  EMKESSCKPDIRTYTPLLKMFCKKGRMKVLEYLLHDMIRKDISLDLGTFSLLVHGLCRAS 498

Query: 1203 LFEDAFFYFNEMVQNGIVPLFETYRKLLYGLLRGN 1307
              + A  +F EMV  G+VP + T+R L   L R N
Sbjct: 499  KLDGACLFFEEMVIRGLVPKYNTFRILREELDRMN 533


>ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
            mitochondrial [Vitis vinifera]
          Length = 535

 Score =  166 bits (420), Expect = 2e-38
 Identities = 105/394 (26%), Positives = 173/394 (43%), Gaps = 11/394 (2%)
 Frame = +3

Query: 138  SLRPEFVMSVMELVLNEWELGLRTFLWAKQQLNYKHTTEAYELIVHILGNAKKFDIMWQL 317
            S+    V  V++   N+W      F WAK Q  Y+H+  +Y  +V ILG  KKFD+MW+L
Sbjct: 116  SVSESLVEQVLKRFSNDWIPAFGFFKWAKAQTGYRHSMNSYNSMVDILGKLKKFDLMWEL 175

Query: 318  LEEFKREGFLFRLKTLEVIFQSYVRAGSIEDSMEAFKRLCRLDDSVGTAALNSLIRVLCM 497
            +EE  R G    L T+  + +   RA   +D++EAF+ + R      T A+N+L+  L  
Sbjct: 176  VEEMDRLGGYVSLATMTKVMRRLARASRWKDAIEAFRGMERFGVKKDTLAMNTLMDALVK 235

Query: 498  ENRKNDCRLVLRRLKEKCPPNEMTYSILIHAFCEGNKLSEALNIFVEMVQNNIQPSLATY 677
            EN       V    K+    N  T+++LIH +C+  K+  AL    EM ++   P + +Y
Sbjct: 236  ENSVEHANDVFVEFKDSILLNPHTFNVLIHGWCKARKMDNALKSMAEMKEHGFCPDVISY 295

Query: 678  SYIIKALSANKQTEFAQKLFDHMK-----------AYALRKFGRTPEVGEFLTDTGLLDE 824
            + I++A    K       + + M+              +   G+  E+ + L     +  
Sbjct: 296  TSIVEAYCREKDFRKVNSVLNEMEEKGCPPNVVTYTIVMHALGKGKEISKALEVYEKMKG 355

Query: 825  GPSNFDSKAYXXXXXXXXXXXXXXXXXXXXXXMVKKGFTPSSKTYSSIFSHLCRKRKSRE 1004
                 D+  Y                      M K+G  P   TY+++ S  C   +  +
Sbjct: 356  SSCVPDTSFYSSLIYILSKAGRLKDARDVFEDMTKQGAIPDVLTYNTMISAACMHSQEED 415

Query: 1005 AFELFNIVVATSHFPDLQTLNTLIETFCSTGHVGIAMELWYMMQEKGYGCNRESYSVFIH 1184
            A +L   +  +S  PDL T + L++  C    + +   L   M +        +YS+ +H
Sbjct: 416  ALKLLLKMEESSCKPDLNTYSPLLKMCCRNNRMKVLSALLNHMFKNDISLEVGTYSLLVH 475

Query: 1185 GLCYNSLFEDAFFYFNEMVQNGIVPLFETYRKLL 1286
            GLC +   E A  +F EMV  G+VP   T++ LL
Sbjct: 476  GLCKSGKLEHACLFFEEMVSKGLVPKDCTHKLLL 509



 Score = 58.2 bits (139), Expect = 9e-06
 Identities = 39/195 (20%), Positives = 75/195 (38%), Gaps = 36/195 (18%)
 Frame = +3

Query: 258 YELIVHILGNAKKFDIMWQLLEEFKREGFLFRLKTLEVIFQSYVRAGSIEDSMEAFKRLC 437
           Y +++H LG  K+     ++ E+ K    +        +     +AG ++D+ + F+ + 
Sbjct: 330 YTIVMHALGKGKEISKALEVYEKMKGSSCVPDTSFYSSLIYILSKAGRLKDARDVFEDMT 389

Query: 438 RLDDSVGTAALNSLIRVLCMENRKNDCRLVLRRLKEK----------------CPPNEM- 566
           +          N++I   CM +++ D   +L +++E                 C  N M 
Sbjct: 390 KQGAIPDVLTYNTMISAACMHSQEEDALKLLLKMEESSCKPDLNTYSPLLKMCCRNNRMK 449

Query: 567 -------------------TYSILIHAFCEGNKLSEALNIFVEMVQNNIQPSLATYSYII 689
                              TYS+L+H  C+  KL  A   F EMV   + P   T+  ++
Sbjct: 450 VLSALLNHMFKNDISLEVGTYSLLVHGLCKSGKLEHACLFFEEMVSKGLVPKDCTHKLLL 509

Query: 690 KALSANKQTEFAQKL 734
           K L      E  +++
Sbjct: 510 KELEKKSMVEAKERV 524


>ref|XP_004162510.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
            mitochondrial-like [Cucumis sativus]
          Length = 614

 Score =  160 bits (405), Expect = 1e-36
 Identities = 105/406 (25%), Positives = 179/406 (44%), Gaps = 14/406 (3%)
 Frame = +3

Query: 108  PEFVPQIKSGS---LRPEFVMSVMELVLNEWELGLRTFLWAKQQLNYKHTTEAYELIVHI 278
            PE V +  +G    +    V  +++   N+W      F WAK Q+ Y+H+ E+Y  +V I
Sbjct: 180  PENVAEALNGKAYRVSNTLVAQLLKRFHNDWIQAYGIFKWAKDQIPYRHSPESYNSMVDI 239

Query: 279  LGNAKKFDIMWQLLEEFKREGFLFRLKTLEVIFQSYVRAGSIEDSMEAFKRLCRLDDSVG 458
            LG AK F +MW+L++E         L+T+  + +   RAG  ++++ AF+ + +   S  
Sbjct: 240  LGKAKNFRLMWELVDEMNHLAGSVSLETMSKVIRRLARAGRHQEAIHAFRNIEKYGISTD 299

Query: 459  TAALNSLIRVLCMENRKNDCRLVLRRLKEKCPPNEMTYSILIHAFCEGNKLSEALNIFVE 638
            T A+N L+  L  E    D   V R LK   P N  ++++LIH +C+  KL EA  I  E
Sbjct: 300  TTAMNVLMDALVKEASVEDAHNVFRELKCSIPFNLASFNVLIHGYCKAKKLDEAWKIMGE 359

Query: 639  MVQNNIQPSLATYSYIIKALSANKQTEFAQKLFDHMK-----------AYALRKFGRTPE 785
            + ++ ++P + +Y+  I+A    K      K+   M+              +   G+  +
Sbjct: 360  VEKSGLEPDVISYTAFIEAHCREKDFRNVDKVLVQMEHKGCKPNVITFTIIMHALGKAKQ 419

Query: 786  VGEFLTDTGLLDEGPSNFDSKAYXXXXXXXXXXXXXXXXXXXXXXMVKKGFTPSSKTYSS 965
            + E L     + +     DS  Y                      M K+G TP   TY++
Sbjct: 420  INEALKVYEKMKKEGCVPDSSFYSSLIFILGKAGRLTDVKEIVEDMEKQGVTPDVLTYNT 479

Query: 966  IFSHLCRKRKSREAFELFNIVVATSHFPDLQTLNTLIETFCSTGHVGIAMELWYMMQEKG 1145
            + S  C   +   A  L   +   S  PDL+T + L++ FC    + +   L   M +  
Sbjct: 480  LISCACAHSQEETALTLLLKMEEVSCKPDLKTYHPLLKMFCRKKRMKVLKFLLDHMFKND 539

Query: 1146 YGCNRESYSVFIHGLCYNSLFEDAFFYFNEMVQNGIVPLFETYRKL 1283
                  +Y++ + GLC N     A  +F EM+   +VP   T++ L
Sbjct: 540  VSIEAGTYAILVRGLCENGKLHLACSFFGEMLSKAMVPKDSTFKML 585


>ref|XP_004138834.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
            mitochondrial-like [Cucumis sativus]
          Length = 591

 Score =  160 bits (405), Expect = 1e-36
 Identities = 105/406 (25%), Positives = 179/406 (44%), Gaps = 14/406 (3%)
 Frame = +3

Query: 108  PEFVPQIKSGS---LRPEFVMSVMELVLNEWELGLRTFLWAKQQLNYKHTTEAYELIVHI 278
            PE V +  +G    +    V  +++   N+W      F WAK Q+ Y+H+ E+Y  +V I
Sbjct: 157  PENVAEALNGKAYRVSNTLVAQLLKRFHNDWIQAYGIFKWAKDQIPYRHSPESYNSMVDI 216

Query: 279  LGNAKKFDIMWQLLEEFKREGFLFRLKTLEVIFQSYVRAGSIEDSMEAFKRLCRLDDSVG 458
            LG AK F +MW+L++E         L+T+  + +   RAG  ++++ AF+ + +   S  
Sbjct: 217  LGKAKNFRLMWELVDEMNHLAGSVSLETMSKVIRRLARAGRHQEAIHAFRNIEKYGISTD 276

Query: 459  TAALNSLIRVLCMENRKNDCRLVLRRLKEKCPPNEMTYSILIHAFCEGNKLSEALNIFVE 638
            T A+N L+  L  E    D   V R LK   P N  ++++LIH +C+  KL EA  I  E
Sbjct: 277  TTAMNVLMDALVKEASVEDAHNVFRELKCSIPFNLASFNVLIHGYCKAKKLDEAWKIMGE 336

Query: 639  MVQNNIQPSLATYSYIIKALSANKQTEFAQKLFDHMK-----------AYALRKFGRTPE 785
            + ++ ++P + +Y+  I+A    K      K+   M+              +   G+  +
Sbjct: 337  VEKSGLEPDVISYTAFIEAHCREKDFRNVDKVLVQMEHKGCKPNVITFTIIMHALGKAKQ 396

Query: 786  VGEFLTDTGLLDEGPSNFDSKAYXXXXXXXXXXXXXXXXXXXXXXMVKKGFTPSSKTYSS 965
            + E L     + +     DS  Y                      M K+G TP   TY++
Sbjct: 397  INEALKVYEKMKKEGCVPDSSFYSSLIFILGKAGRLTDVKEIVEDMEKQGVTPDVLTYNT 456

Query: 966  IFSHLCRKRKSREAFELFNIVVATSHFPDLQTLNTLIETFCSTGHVGIAMELWYMMQEKG 1145
            + S  C   +   A  L   +   S  PDL+T + L++ FC    + +   L   M +  
Sbjct: 457  LISCACAHSQEETALTLLLKMEEVSCKPDLKTYHPLLKMFCRKKRMKVLKFLLDHMFKND 516

Query: 1146 YGCNRESYSVFIHGLCYNSLFEDAFFYFNEMVQNGIVPLFETYRKL 1283
                  +Y++ + GLC N     A  +F EM+   +VP   T++ L
Sbjct: 517  VSIEAGTYAILVRGLCENGKLHLACSFFGEMLSKAMVPKDSTFKML 562


>gb|EXB51131.1| hypothetical protein L484_009095 [Morus notabilis]
          Length = 542

 Score =  159 bits (401), Expect = 4e-36
 Identities = 108/408 (26%), Positives = 179/408 (43%), Gaps = 15/408 (3%)
 Frame = +3

Query: 108  PEFVPQIKSG---SLRPEFVMSVMELVLNEWELGLRTFLWAKQQLNYKHTTEAYELIVHI 278
            PE   Q   G   S+    V  +++   ++W      F WAK Q  YKH+ E Y+L++ I
Sbjct: 109  PEEAAQALDGCGLSVSENTVEQLLKRFSHDWVPAFGVFKWAKLQAGYKHSPELYDLMIDI 168

Query: 279  LGNAKKFDIMWQLLEEFKR-EGFLFRLKTLEVIFQSYVRAGSIEDSMEAFKRLCRLDDSV 455
            LG AKKF +MW+L+EE    EG++  L T+    +   R    +++++ F+ + R   S 
Sbjct: 169  LGKAKKFQLMWELIEEMNNLEGYI-SLSTMTKAMRRLARVCMYKEAIDVFRGIERFGLSK 227

Query: 456  GTAALNSLIRVLCMENRKNDCRLVLRRLKEKCPPNEMTYSILIHAFCEGNKLSEALNIFV 635
               ALN+L+  L  E        V   +K+  P N+ +++ILI+ +C   +L +A  I  
Sbjct: 228  DVVALNNLMDALMKEKSVEHAYEVFSEVKKSIPVNDQSFNILINGWCRARQLDKARKIME 287

Query: 636  EMVQNNIQPSLATYSYIIKALSANKQTEFAQKLFDHMK-----------AYALRKFGRTP 782
            +M ++  +P   +Y+ ++ A   +K       L D M               +   G+  
Sbjct: 288  DMEKHGFKPDTFSYTCLVDAYCGDKDFRKVYALLDEMNDKGCTPNIVTYTILMHALGKAK 347

Query: 783  EVGEFLTDTGLLDEGPSNFDSKAYXXXXXXXXXXXXXXXXXXXXXXMVKKGFTPSSKTYS 962
            +V E L     + E     D+  Y                      M K+G  P+  TY+
Sbjct: 348  QVNEALKVYEKMKENGCVPDASFYNSLIFILGKAGRLKDAREVFDDMSKQGVAPNGLTYT 407

Query: 963  SIFSHLCRKRKSREAFELFNIVVATSHFPDLQTLNTLIETFCSTGHVGIAMELWYMMQEK 1142
            ++ S +C      EA +L   +   S  PDL T   L++  C    + +   L   M   
Sbjct: 408  TMISCVCDHSLEEEALKLLKKMEEESCKPDLGTYAPLLKMCCKKKRMKVLYFLLNHMFNN 467

Query: 1143 GYGCNRESYSVFIHGLCYNSLFEDAFFYFNEMVQNGIVPLFETYRKLL 1286
                +  +YS+ I GLC +   E A  +F EMV  G+VP +  Y++LL
Sbjct: 468  DVSIDVGTYSLLITGLCKSGKVEHACSFFEEMVSKGLVPQYSPYKRLL 515


>gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
          Length = 1874

 Score =  154 bits (390), Expect = 7e-35
 Identities = 103/389 (26%), Positives = 173/389 (44%), Gaps = 14/389 (3%)
 Frame = +3

Query: 183  NEWELGLRTFLWAKQQLNYKHTTEAYELIVHILGNAKKFDIMWQLLEEFKREGFLFRLKT 362
            N+W      F+W   Q  Y H  ++Y+L+V ILG  K+FD+MW L+ +    G L  L T
Sbjct: 1464 NDWVAAFGFFMWVGTQGGYCHCADSYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMT 1523

Query: 363  LEVIFQSYVRAGSIEDSMEAFKRLCRLDDSVGTAALNSLIRVLCMENRKNDCRLVLRRLK 542
            +  + +    A    ++++AF ++ R      T A+N L+  LC E      R V + L+
Sbjct: 1524 MTKVMRRLAGASRWTEAIDAFHKMDRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELR 1583

Query: 543  EKCPPNEMTYSILIHAFCEGNKLSEALNIFVEMVQNNIQPSLATYSYIIKALSANKQTEF 722
               PP+E +++ L+H +C+   L EAL+   EM Q+   PS+ TY+ +++A    K  + 
Sbjct: 1584 GTIPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQT 1643

Query: 723  AQKLFDHMK--------------AYALRKFGRTPEVGEFLTDTGLLDEGPSNFDSKAYXX 860
               L D M+               +AL K GRT E  +  T   L ++G +  D+  Y  
Sbjct: 1644 VYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALD--TFDKLKEDGVAP-DASFYNS 1700

Query: 861  XXXXXXXXXXXXXXXXXXXXMVKKGFTPSSKTYSSIFSHLCRKRKSREAFELFNIVVATS 1040
                                M   G  P+  T++++ S  C   ++  A +L   +   S
Sbjct: 1701 LIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQS 1760

Query: 1041 HFPDLQTLNTLIETFCSTGHVGIAMELWYMMQEKGYGCNRESYSVFIHGLCYNSLFEDAF 1220
              PD++T   L++  C    V I + L   M  K    +  +Y++ +  LC N     + 
Sbjct: 1761 CNPDIKTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSC 1820

Query: 1221 FYFNEMVQNGIVPLFETYRKLLYGLLRGN 1307
             +  EMV  G  P  ET+  ++  L + N
Sbjct: 1821 LFLEEMVSKGFAPKQETFDLVMEKLEKRN 1849


>ref|NP_001051249.1| Os03g0746400 [Oryza sativa Japonica Group]
            gi|113549720|dbj|BAF13163.1| Os03g0746400, partial [Oryza
            sativa Japonica Group]
          Length = 613

 Score =  154 bits (390), Expect = 7e-35
 Identities = 103/389 (26%), Positives = 173/389 (44%), Gaps = 14/389 (3%)
 Frame = +3

Query: 183  NEWELGLRTFLWAKQQLNYKHTTEAYELIVHILGNAKKFDIMWQLLEEFKREGFLFRLKT 362
            N+W      F+W   Q  Y H  ++Y+L+V ILG  K+FD+MW L+ +    G L  L T
Sbjct: 203  NDWVAAFGFFMWVGTQGGYCHCADSYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMT 262

Query: 363  LEVIFQSYVRAGSIEDSMEAFKRLCRLDDSVGTAALNSLIRVLCMENRKNDCRLVLRRLK 542
            +  + +    A    ++++AF ++ R      T A+N L+  LC E      R V + L+
Sbjct: 263  MTKVMRRLAGASRWTEAIDAFHKMDRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELR 322

Query: 543  EKCPPNEMTYSILIHAFCEGNKLSEALNIFVEMVQNNIQPSLATYSYIIKALSANKQTEF 722
               PP+E +++ L+H +C+   L EAL+   EM Q+   PS+ TY+ +++A    K  + 
Sbjct: 323  GTIPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQT 382

Query: 723  AQKLFDHMK--------------AYALRKFGRTPEVGEFLTDTGLLDEGPSNFDSKAYXX 860
               L D M+               +AL K GRT E  +  T   L ++G +  D+  Y  
Sbjct: 383  VYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALD--TFDKLKEDGVAP-DASFYNS 439

Query: 861  XXXXXXXXXXXXXXXXXXXXMVKKGFTPSSKTYSSIFSHLCRKRKSREAFELFNIVVATS 1040
                                M   G  P+  T++++ S  C   ++  A +L   +   S
Sbjct: 440  LIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQS 499

Query: 1041 HFPDLQTLNTLIETFCSTGHVGIAMELWYMMQEKGYGCNRESYSVFIHGLCYNSLFEDAF 1220
              PD++T   L++  C    V I + L   M  K    +  +Y++ +  LC N     + 
Sbjct: 500  CNPDIKTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSC 559

Query: 1221 FYFNEMVQNGIVPLFETYRKLLYGLLRGN 1307
             +  EMV  G  P  ET+  ++  L + N
Sbjct: 560  LFLEEMVSKGFAPKQETFDLVMEKLEKRN 588


>gb|ABF98845.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica Group]
            gi|215693326|dbj|BAG88708.1| unnamed protein product
            [Oryza sativa Japonica Group] gi|222625789|gb|EEE59921.1|
            hypothetical protein OsJ_12549 [Oryza sativa Japonica
            Group]
          Length = 554

 Score =  154 bits (390), Expect = 7e-35
 Identities = 103/389 (26%), Positives = 173/389 (44%), Gaps = 14/389 (3%)
 Frame = +3

Query: 183  NEWELGLRTFLWAKQQLNYKHTTEAYELIVHILGNAKKFDIMWQLLEEFKREGFLFRLKT 362
            N+W      F+W   Q  Y H  ++Y+L+V ILG  K+FD+MW L+ +    G L  L T
Sbjct: 144  NDWVAAFGFFMWVGTQGGYCHCADSYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMT 203

Query: 363  LEVIFQSYVRAGSIEDSMEAFKRLCRLDDSVGTAALNSLIRVLCMENRKNDCRLVLRRLK 542
            +  + +    A    ++++AF ++ R      T A+N L+  LC E      R V + L+
Sbjct: 204  MTKVMRRLAGASRWTEAIDAFHKMDRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELR 263

Query: 543  EKCPPNEMTYSILIHAFCEGNKLSEALNIFVEMVQNNIQPSLATYSYIIKALSANKQTEF 722
               PP+E +++ L+H +C+   L EAL+   EM Q+   PS+ TY+ +++A    K  + 
Sbjct: 264  GTIPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQT 323

Query: 723  AQKLFDHMK--------------AYALRKFGRTPEVGEFLTDTGLLDEGPSNFDSKAYXX 860
               L D M+               +AL K GRT E  +  T   L ++G +  D+  Y  
Sbjct: 324  VYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALD--TFDKLKEDGVAP-DASFYNS 380

Query: 861  XXXXXXXXXXXXXXXXXXXXMVKKGFTPSSKTYSSIFSHLCRKRKSREAFELFNIVVATS 1040
                                M   G  P+  T++++ S  C   ++  A +L   +   S
Sbjct: 381  LIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQS 440

Query: 1041 HFPDLQTLNTLIETFCSTGHVGIAMELWYMMQEKGYGCNRESYSVFIHGLCYNSLFEDAF 1220
              PD++T   L++  C    V I + L   M  K    +  +Y++ +  LC N     + 
Sbjct: 441  CNPDIKTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSC 500

Query: 1221 FYFNEMVQNGIVPLFETYRKLLYGLLRGN 1307
             +  EMV  G  P  ET+  ++  L + N
Sbjct: 501  LFLEEMVSKGFAPKQETFDLVMEKLEKRN 529


>gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1833

 Score =  154 bits (390), Expect = 7e-35
 Identities = 103/389 (26%), Positives = 173/389 (44%), Gaps = 14/389 (3%)
 Frame = +3

Query: 183  NEWELGLRTFLWAKQQLNYKHTTEAYELIVHILGNAKKFDIMWQLLEEFKREGFLFRLKT 362
            N+W      F+W   Q  Y H  ++Y+L+V ILG  K+FD+MW L+ +    G L  L T
Sbjct: 1423 NDWVAAFGFFMWVGTQGGYCHCADSYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMT 1482

Query: 363  LEVIFQSYVRAGSIEDSMEAFKRLCRLDDSVGTAALNSLIRVLCMENRKNDCRLVLRRLK 542
            +  + +    A    ++++AF ++ R      T A+N L+  LC E      R V + L+
Sbjct: 1483 MTKVMRRLAGASRWTEAIDAFHKMDRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELR 1542

Query: 543  EKCPPNEMTYSILIHAFCEGNKLSEALNIFVEMVQNNIQPSLATYSYIIKALSANKQTEF 722
               PP+E +++ L+H +C+   L EAL+   EM Q+   PS+ TY+ +++A    K  + 
Sbjct: 1543 GTIPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQT 1602

Query: 723  AQKLFDHMK--------------AYALRKFGRTPEVGEFLTDTGLLDEGPSNFDSKAYXX 860
               L D M+               +AL K GRT E  +  T   L ++G +  D+  Y  
Sbjct: 1603 VYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALD--TFDKLKEDGVAP-DASFYNS 1659

Query: 861  XXXXXXXXXXXXXXXXXXXXMVKKGFTPSSKTYSSIFSHLCRKRKSREAFELFNIVVATS 1040
                                M   G  P+  T++++ S  C   ++  A +L   +   S
Sbjct: 1660 LIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQS 1719

Query: 1041 HFPDLQTLNTLIETFCSTGHVGIAMELWYMMQEKGYGCNRESYSVFIHGLCYNSLFEDAF 1220
              PD++T   L++  C    V I + L   M  K    +  +Y++ +  LC N     + 
Sbjct: 1720 CNPDIKTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSC 1779

Query: 1221 FYFNEMVQNGIVPLFETYRKLLYGLLRGN 1307
             +  EMV  G  P  ET+  ++  L + N
Sbjct: 1780 LFLEEMVSKGFAPKQETFDLVMEKLEKRN 1808


>ref|XP_006650574.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
            mitochondrial-like [Oryza brachyantha]
          Length = 549

 Score =  154 bits (388), Expect = 1e-34
 Identities = 102/389 (26%), Positives = 170/389 (43%), Gaps = 14/389 (3%)
 Frame = +3

Query: 183  NEWELGLRTFLWAKQQLNYKHTTEAYELIVHILGNAKKFDIMWQLLEEFKREGFLFRLKT 362
            N+W      F+WA  Q  Y H  ++Y+L+V ILG +K+FD+MW L+ +    G L  L T
Sbjct: 139  NDWVAAFGFFMWAGTQGGYCHCADSYDLMVDILGKSKQFDLMWGLINQMVEVGGLVSLMT 198

Query: 363  LEVIFQSYVRAGSIEDSMEAFKRLCRLDDSVGTAALNSLIRVLCMENRKNDCRLVLRRLK 542
            +  + +    A    D+++AF R+ R      T A+N L+  LC E      R   + L+
Sbjct: 199  MTKVMRRLAGASRWTDAIDAFHRMDRFGVVKDTKAMNVLLDTLCKERSVKRARGAFQELR 258

Query: 543  EKCPPNEMTYSILIHAFCEGNKLSEALNIFVEMVQNNIQPSLATYSYIIKALSANKQTEF 722
               PP+E +++ L+H +C+   L EAL    EM Q+   PS+ TY+ +++A    K  + 
Sbjct: 259  GTIPPDESSFNTLVHGWCKARMLKEALETMEEMNQHGFSPSVVTYTSLLEAYCMEKDFQT 318

Query: 723  AQKLFDHMK--------------AYALRKFGRTPEVGEFLTDTGLLDEGPSNFDSKAYXX 860
               L D M                +AL K GRT E  +      L ++G +  D+  Y  
Sbjct: 319  VYSLLDEMHKRRCPPNVITYTIVMHALGKAGRTREALDMFDK--LKEDGVAP-DASFYNS 375

Query: 861  XXXXXXXXXXXXXXXXXXXXMVKKGFTPSSKTYSSIFSHLCRKRKSREAFELFNIVVATS 1040
                                M K G   +  T++++ S  C   ++  A +L   +   S
Sbjct: 376  LIYILGRAGRLEDAYSVVEEMHKTGIPSNVTTFNTLISAACDHSQAENALKLLVKMEEQS 435

Query: 1041 HFPDLQTLNTLIETFCSTGHVGIAMELWYMMQEKGYGCNRESYSVFIHGLCYNSLFEDAF 1220
              PD++T   L++  C    V   + L   M  K    +  +Y++ +  LC N     + 
Sbjct: 436  CKPDIKTYTPLLKLCCKKQWVKTLLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSC 495

Query: 1221 FYFNEMVQNGIVPLFETYRKLLYGLLRGN 1307
             +  EM+  G  P  ET+  ++  L + N
Sbjct: 496  LFLEEMISKGFTPKLETFDLVMKKLEKRN 524


>ref|XP_002517094.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223543729|gb|EEF45257.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 549

 Score =  154 bits (388), Expect = 1e-34
 Identities = 100/412 (24%), Positives = 182/412 (44%), Gaps = 12/412 (2%)
 Frame = +3

Query: 156  VMSVMELVLNEWELGLRTFLWAKQQLNYKHTTEAYELIVHILGNAKKFDIMWQLLEEFKR 335
            +  ++    N+W   L  F WAK Q  Y H  + Y+L+V ILG  KKF  MW+L++E + 
Sbjct: 134  ISQLLNRFCNDWVPALGLFTWAKHQTGYVHPPDLYDLMVDILGRRKKFSFMWELVKEMEN 193

Query: 336  -EGFLFRLKTLEVIFQSYVRAGSIEDSMEAFKRLCRLDDSVGTAALNSLIRVLCMENRKN 512
             EG++  L T++ + +   RAG+ +D++EAF+ + +L       ALN L+  L  E    
Sbjct: 194  LEGYV-SLVTMKKVMRRLARAGNFQDAVEAFRGIEKLGVRKDIEALNVLMDALVKEGSVE 252

Query: 513  DCRLVLRRLKEKCPPNEMTYSILIHAFCEGNKLSEALNIFVEMVQNNIQPSLATYSYIIK 692
                     K+    +  +++IL+H +C+  KL +A  I  EM +   QP++ +Y+  I+
Sbjct: 253  HAYSAFMEFKDSIHVDFQSFNILLHGYCKARKLDDARKIMDEMDKQGFQPNVVSYTCFIE 312

Query: 693  ALSANKQTEFAQKLFDHMKAYA-----------LRKFGRTPEVGEFLTDTGLLDEGPSNF 839
                 K     + +F  M+  +           +   G+  +V + L    ++       
Sbjct: 313  LYCKLKDFRNVEAIFSEMQEKSCKPNVITYTIFMHALGKAKQVNKALEVYEMMKSNCCVP 372

Query: 840  DSKAYXXXXXXXXXXXXXXXXXXXXXXMVKKGFTPSSKTYSSIFSHLCRKRKSREAFELF 1019
            D+  Y                      M K+G +P   TY+++ +  C   +   A +L 
Sbjct: 373  DASFYSSLIFVLTQSGRLKDAWDVFEDMKKQGVSPDLLTYNTMITSACTHLEEENALKLL 432

Query: 1020 NIVVATSHFPDLQTLNTLIETFCSTGHVGIAMELWYMMQEKGYGCNRESYSVFIHGLCYN 1199
              +   S  PD+QT   L++  C    + +   L   M +     +  +Y + + GLC +
Sbjct: 433  RRMEEDSCKPDIQTYAPLLKMCCRKKRIKVLKFLLNHMFKNNISIDLGTYVLLVGGLCKS 492

Query: 1200 SLFEDAFFYFNEMVQNGIVPLFETYRKLLYGLLRGNNPDMLADLSSIVGELE 1355
               E A  +F EMV  G++P   TY+ L+  L + N  +    +  ++ + E
Sbjct: 493  GKLELACSFFEEMVMKGLIPRDRTYKMLVEELEQNNLTEAKEKIQKLMFQTE 544


>ref|XP_006849933.1| hypothetical protein AMTR_s00022p00121040 [Amborella trichopoda]
            gi|548853531|gb|ERN11514.1| hypothetical protein
            AMTR_s00022p00121040 [Amborella trichopoda]
          Length = 438

 Score =  152 bits (385), Expect = 3e-34
 Identities = 95/403 (23%), Positives = 182/403 (45%), Gaps = 11/403 (2%)
 Frame = +3

Query: 147  PEFVMSVMELVLNEWELGLRTFLWAKQQLNYKHTTEAYELIVHILGNAKKFDIMWQLLEE 326
            P+ V  +++   N      R F W  +Q+NY H+ ++Y +++  L   +++ +MW L+ +
Sbjct: 21   PDLVEDILKRFENAGMQAYRFFQWVDKQINYSHSVKSYHIMIGSLAKIRQYQLMWDLVND 80

Query: 327  FKREGFLFRLKTLEVIFQSYVRAGSIEDSMEAFKRLCRLDDSVGTAALNSLIRVLCMENR 506
             +R+  L   +T  ++ + Y RA  +++++  F  + +   +    A NSL+   C    
Sbjct: 81   MRRKDILNN-ETFCIMIRKYARAHKVDEAVYTFNVMDKFGLTPNLTAFNSLLSAFCKAKN 139

Query: 507  KNDCRLVLRRLKEKCPPNEMTYSILIHAFCEGNKLSEALNIFVEMVQNNIQPSLATYSYI 686
                + +   +K++  PN +TYSIL+  + +   L +A  IF+EM+  N +P + TY  +
Sbjct: 140  VRKAQEIFDDMKDRFEPNSITYSILLEGWGKEPNLPKAREIFLEMIDKNCEPDIVTYGIM 199

Query: 687  IKALSANKQTEFAQKLFDHMK-----------AYALRKFGRTPEVGEFLTDTGLLDEGPS 833
            I +L    + E A      M+           +  +  +G    +G+ +     +++   
Sbjct: 200  IDSLCKAGRVEEATGYMKEMRSRGCIPTSYIYSILIHTYGVERSIGDAVDSFLEMEKDGI 259

Query: 834  NFDSKAYXXXXXXXXXXXXXXXXXXXXXXMVKKGFTPSSKTYSSIFSHLCRKRKSREAFE 1013
              D  AY                      M KK   P+S+T + I + L    ++ EAF 
Sbjct: 260  KADVAAYNALISAFCRAKKFKNVYRVLEEMDKKSVAPNSRTCNIILNGLIGSGETDEAFR 319

Query: 1014 LFNIVVATSHFPDLQTLNTLIETFCSTGHVGIAMELWYMMQEKGYGCNRESYSVFIHGLC 1193
            +F  ++     PD  T   +I+ FC    +  AM++W  M  K +  +  ++SV I+GLC
Sbjct: 320  IFKSMIKHCE-PDSDTYTMMIKMFCEIDKLEKAMKVWKYMGLKQFVPSMHTFSVLINGLC 378

Query: 1194 YNSLFEDAFFYFNEMVQNGIVPLFETYRKLLYGLLRGNNPDML 1322
                   A     +M++ GI P   T+R++   LL+    D+L
Sbjct: 379  RKGELNKACILLEDMIEKGIRPPDLTFRRVRQLLLKEGRKDVL 421


>ref|XP_002520317.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223540536|gb|EEF42103.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 439

 Score =  152 bits (384), Expect = 3e-34
 Identities = 104/414 (25%), Positives = 185/414 (44%), Gaps = 12/414 (2%)
 Frame = +3

Query: 147  PEFVMSVMELVLNEWELGLRTFLWAKQQLNYKHTTEAYELIVHILGNAKKFDIMWQLLEE 326
            PE V  V+    N   +  R F WA++QL+Y H+  AY  ++  L   +++ IMW L+  
Sbjct: 22   PEIVEDVLRRFENAGMVAYRFFEWAEKQLHYTHSVRAYHTMIESLAKIRQYQIMWDLINA 81

Query: 327  FKREGFLFRLKTLEVIFQSYVRAGSIEDSMEAFKRLCRLDDSVGTAALNSLIRVLCMENR 506
             KR+  L  ++T  +I + Y RA  +E+++  F  + + D     AA N L   LC    
Sbjct: 82   MKRKRML-NVETFCIIMRKYARAQKLEEAVYTFNVMEKYDVPPNLAAFNGLFSALCKSKN 140

Query: 507  KNDCRLVLRRLKEKCPPNEMTYSILIHAFCEGNKLSEALNIFVEMVQNNIQPSLATYSYI 686
                + +    K++  P+  TY+IL+  + +   L +A  IF EMV     P + TY  +
Sbjct: 141  VRKAQEIFDSSKDRFVPDSKTYTILLEGWGKTPNLPKAREIFREMVDVGCSPDIVTYGIM 200

Query: 687  IKALSANKQTEFAQKLFDHMK-----------AYALRKFGRTPEVGEFLTDTGL-LDEGP 830
            +  L    + + A  +   M            +  +  +G    + E   DT L +++  
Sbjct: 201  VDILCKAGRVDEALDIVKEMDLTICKPTSFIYSVLIHTYGIENRI-EDAVDTFLGMEKNG 259

Query: 831  SNFDSKAYXXXXXXXXXXXXXXXXXXXXXXMVKKGFTPSSKTYSSIFSHLCRKRKSREAF 1010
               D  AY                      M  KG  P+S+T + I ++L  + ++ EAF
Sbjct: 260  VKADVAAYNALIGAFCKVNKFKNVYRVLNEMDYKGMQPNSRTLNIILNNLIARGETDEAF 319

Query: 1011 ELFNIVVATSHFPDLQTLNTLIETFCSTGHVGIAMELWYMMQEKGYGCNRESYSVFIHGL 1190
             +F  ++     PD  T   +I+ FC    + +A+++W  M++K +  +  ++SV I+GL
Sbjct: 320  RVFRRMIKVCE-PDADTYTMMIKMFCERNELEMALKVWKYMKKKHFVPSMHTFSVLINGL 378

Query: 1191 CYNSLFEDAFFYFNEMVQNGIVPLFETYRKLLYGLLRGNNPDMLADLSSIVGEL 1352
            C       A     +M++ GI P   T+ +L + L++    D+L  L   +  L
Sbjct: 379  CEEGDVSHACVMLEDMIEKGIRPSGVTFGRLRHLLIKEGREDVLEFLQQKINVL 432


>gb|EOY05751.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
            cacao]
          Length = 554

 Score =  152 bits (383), Expect = 5e-34
 Identities = 112/413 (27%), Positives = 174/413 (42%), Gaps = 21/413 (5%)
 Frame = +3

Query: 189  WELGLRTFLWAKQQLNYKHTTEAYELIVHILGNAKKFDIMWQLLEEFKREGFLFRLKTLE 368
            W      F+WAK+Q  Y+HT E Y+ +V ILG AKKFD++  L+ E  +     RL T+ 
Sbjct: 145  WISAYGVFIWAKKQSGYRHTPELYDSMVDILGKAKKFDLVLDLVNEMNQLKGYIRLNTMV 204

Query: 369  VIFQSYVRAGSIEDSMEAFKRLCRLDDSVGTAALNSLIRVLCMENRKNDCRLVLRRLKEK 548
             + +   +AG   +++EAF+RL          ALN L+  L   +       V   LKE 
Sbjct: 205  KVIRRLAKAGRFSEAIEAFRRLEEYGIGKDVVALNGLLDALVKGDGVEHAYEVFVELKEC 264

Query: 549  CPPNEMTYSILIHAFCEGNKLSEALNIFVEMVQNNIQPSLATYSYIIKALSANKQTEFAQ 728
             P N  +++ILIH FC+  +L +A  I  EM +   QP + +Y+  I+A    K      
Sbjct: 265  MPLNSSSFNILIHGFCKARRLDDARKILNEMEEYGCQPCVVSYTSFIEAYCHEKDFHNVD 324

Query: 729  KLFDHMKAYALRK-----------------FGRTPEVGEFLTDTGLLDEGPSNFDSKAYX 857
             + D MK    R                   G+  EV E + + G L       DS  Y 
Sbjct: 325  AVLDEMKEKGCRPNVVTYTIIMHARGKAGIIGKALEVYEKMKNDGCLP------DSSFYS 378

Query: 858  XXXXXXXXXXXXXXXXXXXXXMVKKGFTPSSKTYSSIFSHLCRKRKSREAFELFNIVVAT 1037
                                 M K+G  P+  TY+++ +  C      +A +L   +   
Sbjct: 379  SLIFILSKSGRLKDADEIFEDMKKQGVRPNVLTYNTMITSACGHSLEEKALKLLQRMEED 438

Query: 1038 SHFPDLQTLNTLIETFCSTGHVGIAMELWYMMQEKGYGCNRESYSVFIHGLCYNSLFEDA 1217
            S  PD+ T   L++  C    + +   L   M       +  +YS+ +  LC +   E A
Sbjct: 439  SCKPDISTYGPLLKMCCRKKRMKVLNFLLSHMLNNDVSIDLATYSLLVQRLCNSGKLEQA 498

Query: 1218 FFYFNEMVQNGIVPLFETYRKLLYGLLRGNN----PDMLADLSSIVGELELKG 1364
              +F EMV  G++P  ++ RK L   L   N     + + +L S + EL   G
Sbjct: 499  CAFFEEMVLKGMIPK-DSIRKTLVEKLEKENMAKAKEQIQELMSNLKELVKTG 550


>gb|EMJ22798.1| hypothetical protein PRUPE_ppa026817mg, partial [Prunus persica]
          Length = 543

 Score =  151 bits (382), Expect = 6e-34
 Identities = 100/393 (25%), Positives = 167/393 (42%), Gaps = 11/393 (2%)
 Frame = +3

Query: 141  LRPEFVMSVMELVLNEWELGLRTFLWAKQQLNYKHTTEAYELIVHILGNAKKFDIMWQLL 320
            L    V  V++   NEW      F+WAK Q  Y+H  EAY  +V ILG ++ F++MW+++
Sbjct: 138  LSNSLVERVLKRFSNEWVPAFGFFIWAKAQTGYRHPPEAYNSMVDILGKSENFELMWEMV 197

Query: 321  EEFKREGFLFRLKTLEVIFQSYVRAGSIEDSMEAFKRLCRLDDSVGTAALNSLIRVLCME 500
            EE              ++ +   RAG  +++++AF+ + R        +LN+L+  L  E
Sbjct: 198  EE--------------MVMRRLARAGRYKEAIDAFRGIERFGVRRDVLSLNTLMGALVKE 243

Query: 501  NRKNDCRLVLRRLKEKCPPNEMTYSILIHAFCEGNKLSEALNIFVEMVQNNIQPSLATYS 680
                    V    KE  P N  T+++LIH +C+  KL  A N   EM ++   P + +Y+
Sbjct: 244  RSVEHAHEVFLEFKESIPLNPQTFNVLIHGWCKPRKLDIARNTMEEMEKHGFHPDVLSYT 303

Query: 681  YIIKALSANKQTEFAQKLFDHMKAYA-----------LRKFGRTPEVGEFLTDTGLLDEG 827
              I+A   +K      ++   MK  A           +   G+  E+ + L     +   
Sbjct: 304  CFIEAYCHDKDFRKVDEVLGEMKDKACEPNTVTYTIIMHALGKAREITKALEVYEKMKRS 363

Query: 828  PSNFDSKAYXXXXXXXXXXXXXXXXXXXXXXMVKKGFTPSSKTYSSIFSHLCRKRKSREA 1007
                D+  Y                      M  +G  P + T++++ S  C   +   A
Sbjct: 364  GCVPDTSFYNSLIFLLGKAGRLKDVQEVVEDMTNQGVKPDTLTHNTLISSACAHSQEEAA 423

Query: 1008 FELFNIVVATSHFPDLQTLNTLIETFCSTGHVGIAMELWYMMQEKGYGCNRESYSVFIHG 1187
             +L   +   S  PDL+T   L++ FC    + +   L   M +        +Y++ + G
Sbjct: 424  LKLLKNMEEESCKPDLKTYAPLLKLFCRKKRMRVLCFLLDHMFKNDVSIEGGTYALLVRG 483

Query: 1188 LCYNSLFEDAFFYFNEMVQNGIVPLFETYRKLL 1286
            LC N   E+A  +F EMV  G VP   TY  L+
Sbjct: 484  LCSNGKLENACSFFEEMVSKGFVPKDSTYNMLI 516


>ref|XP_003548477.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
            mitochondrial-like [Glycine max]
          Length = 612

 Score =  147 bits (372), Expect = 9e-33
 Identities = 108/391 (27%), Positives = 171/391 (43%), Gaps = 18/391 (4%)
 Frame = +3

Query: 141  LRPEFVMSVMELVLNEWELGLRTFLWAKQQLNYKHTTEAYELIVHILGNAKKFDIMWQLL 320
            L PE V+ V+    N+WE     FLWA +Q  Y H+   Y  ++ ILG  +KFD  W L+
Sbjct: 156  LSPELVVEVLSRTRNDWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAWNLI 215

Query: 321  EEFK--REGF-LFRLKTLEVIFQSYVRAGSIEDSMEAFKRLCRLDDSVGTAALNSLIRVL 491
            EE +  R G  L   +TL ++ + Y     +  ++  F    R +  VG    +SL+  L
Sbjct: 216  EEMRGGRNGLSLVTPQTLLIMIRKYCAVHDVARAINTFYAYKRFNFRVGLEEFHSLLSAL 275

Query: 492  CMENRKNDCRLVLRRLKEKCPPNEMTYSILIHAFCE-GNKLSEALNIFVEMVQNNIQPSL 668
            C      D   +L   K+  P +  +++I+++ +C      S A  I+ EM++  IQ  +
Sbjct: 276  CRYKNVQDAEYLLFCNKDVFPLDTKSFNIILNGWCNLIVSTSHAERIWHEMIKRRIQHDV 335

Query: 669  ATYSYIIKALSANKQTEFAQKLFDHMK--------------AYALRKFGRTPEVGEFLTD 806
             +Y  II   S + +     ++FD MK               YAL K GR   V E +  
Sbjct: 336  VSYGSIISCYSKSSKLYKVLRMFDEMKKRKITPDRKVYNAVIYALAK-GRL--VKEAVNL 392

Query: 807  TGLLDEGPSNFDSKAYXXXXXXXXXXXXXXXXXXXXXXMVKKGFTPSSKTYSSIFSHLCR 986
             G ++      D   Y                      M+K+  +P+ +T+ + F  L  
Sbjct: 393  IGTMEGNDVTPDVVTYNSLIKPLCKAHKVDEAKQLFDEMLKRHLSPTIQTFHAFFRIL-- 450

Query: 987  KRKSREAFELFNIVVATSHFPDLQTLNTLIETFCSTGHVGIAMELWYMMQEKGYGCNRES 1166
             R   E FEL + +     +P ++T   LI  FC    +    ++W  M+E     +R S
Sbjct: 451  -RTKEEVFELLDKMKELRCYPTIETYIMLIRKFCRWCQLDDVFKIWDAMREDEISHDRSS 509

Query: 1167 YSVFIHGLCYNSLFEDAFFYFNEMVQNGIVP 1259
            Y V IHGL  N   E+A  Y+ EM + G +P
Sbjct: 510  YIVLIHGLFLNGKLEEAQRYYAEMQEKGFLP 540


>ref|XP_003610755.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355512090|gb|AES93713.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 596

 Score =  147 bits (372), Expect = 9e-33
 Identities = 103/389 (26%), Positives = 178/389 (45%), Gaps = 12/389 (3%)
 Frame = +3

Query: 156  VMSVMELVLNEWELGLRTFLWAKQQLNYKHTTEAYELIVHILGNAKKFDIMWQLLEEFKR 335
            VM V++   N+W      F+WAK+Q  Y H+ E Y L+V ILG AK+FD+MW+L++E KR
Sbjct: 180  VMQVLKRFGNDWVAAYGFFIWAKKQTPYVHSPEVYNLMVDILGKAKEFDLMWKLVKEMKR 239

Query: 336  -EGFLFRLKTLEVIFQSYVRAGSIEDSMEAFKRLCRLDDSVGTAALNSLIRVLCMENRKN 512
             EG++  L T+  + + + +A   ED++EAF+ + +      TAALN L+  L       
Sbjct: 240  IEGYVC-LDTMSKVMRRFAKAQRHEDAVEAFRGMGKYGVEKDTAALNKLLDALVKGQSIE 298

Query: 513  DCRLVLRRLKEKCPPNEMTYSILIHAFCEGNKLSEALNIFVEMVQNNIQPSLATYSYIIK 692
                VL   K   P +  +++ILI+ +C+     +A  +  E  ++  +P + TY+  I+
Sbjct: 299  IAHNVLDEFKSSVPLSSPSFNILINGWCKVRNFEKARKVMEERKEHGFEPDVFTYNNFIE 358

Query: 693  ALSANKQTEFAQKLFDHMK-----------AYALRKFGRTPEVGEFLTDTGLLDEGPSNF 839
            +   +K      ++ + M+              L  +G+  ++ + L +   + +     
Sbjct: 359  SYCHDKDFRKVDEVLEEMRGNGCPPNAVTYTILLLGYGKAGQLSKALEEYERMKKDGIVP 418

Query: 840  DSKAYXXXXXXXXXXXXXXXXXXXXXXMVKKGFTPSSKTYSSIFSHLCRKRKSREAFELF 1019
            D+  Y                      M K+G      TY+++ S  C   K   A  L 
Sbjct: 419  DTPFYSSLMYILGKAGRLKDACEVFDDMPKQGVVRDVVTYNTMISTACAHSKEETALRLL 478

Query: 1020 NIVVATSHFPDLQTLNTLIETFCSTGHVGIAMELWYMMQEKGYGCNRESYSVFIHGLCYN 1199
              +  TS  PDLQT + L++  C    + +   L   M +     +R +Y++ +  L  +
Sbjct: 479  KEMEETSCKPDLQTYHPLLKMCCKKKRMKVLKFLLDHMFKHDLCPDRGTYTLLVQSLSNS 538

Query: 1200 SLFEDAFFYFNEMVQNGIVPLFETYRKLL 1286
                +A  +F EMV  G  P+ ET  KLL
Sbjct: 539  GKLVEACTFFEEMVSKGFTPM-ETTVKLL 566


>ref|XP_006468828.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
            mitochondrial-like [Citrus sinensis]
          Length = 537

 Score =  145 bits (366), Expect = 4e-32
 Identities = 99/403 (24%), Positives = 179/403 (44%), Gaps = 13/403 (3%)
 Frame = +3

Query: 126  IKSGSLRPEFVMSVMELVLNEWELGLRTFLWAKQQLNYKHTTEAYELIVHILGNAKKFDI 305
            + S  + P  V+ V++ + N   L L  F WA++Q  +K++TE+Y  ++  LG  K+F +
Sbjct: 107  VASIEVSPTLVLEVLKRLSNAGVLALSFFRWAEKQKGFKYSTESYNALIESLGKVKQFKL 166

Query: 306  MWQLLEEFKREGFLFRLKTLEVIFQSYVRAGSIEDSMEAFKRLCRLDDSVGTAALNSLIR 485
            +W L+ E KR+  L    T  +I + Y RA  + ++++AF+++ +          N LI 
Sbjct: 167  IWDLVSEMKRKRLLTN-DTFALISRRYARARRVNEAIDAFEKMDKFGLKQELPDFNRLID 225

Query: 486  VLCMENRKNDCRLVLRRLKEK-CPPNEMTYSILIHAFCEGNKLSEALNIFVEMVQNNIQP 662
             LC        + V  ++K++   P+  +Y+IL+  + +   L     ++ EM  +  +P
Sbjct: 226  TLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEP 285

Query: 663  SLATYSYIIKALSANKQTEFAQKLFDHMKAY-----------ALRKFGRTPEVGEFLTDT 809
             + +Y  +I A  + K+ + A +LF  M+A             +   G    + E L   
Sbjct: 286  DVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFF 345

Query: 810  GLLDEGPSNFDSKAYXXXXXXXXXXXXXXXXXXXXXXMVKKGFTPSSKTYSSIFSHLCRK 989
            G   +     ++  Y                      M K G  P+S+TY  +  HL + 
Sbjct: 346  GQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNSRTYDIVLHHLIKA 405

Query: 990  RKSREAFELFNIVVATSHF-PDLQTLNTLIETFCSTGHVGIAMELWYMMQEKGYGCNRES 1166
             ++ EA+ +F  +       P + T   ++  FC    V +AM +W  M+ +G       
Sbjct: 406  GRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHM 465

Query: 1167 YSVFIHGLCYNSLFEDAFFYFNEMVQNGIVPLFETYRKLLYGL 1295
            YS  I+ LC+    +DA  YF EM+  GI P  + +  L   L
Sbjct: 466  YSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 508


>ref|XP_006448295.1| hypothetical protein CICLE_v10014876mg [Citrus clementina]
            gi|557550906|gb|ESR61535.1| hypothetical protein
            CICLE_v10014876mg [Citrus clementina]
          Length = 531

 Score =  145 bits (366), Expect = 4e-32
 Identities = 99/403 (24%), Positives = 179/403 (44%), Gaps = 13/403 (3%)
 Frame = +3

Query: 126  IKSGSLRPEFVMSVMELVLNEWELGLRTFLWAKQQLNYKHTTEAYELIVHILGNAKKFDI 305
            + S  + P  V+ V++ + N   L L  F WA++Q  +K++TE+Y  ++  LG  K+F +
Sbjct: 107  VASIEVSPTLVLEVLKRLSNAGVLALSFFRWAEKQKGFKYSTESYNALIESLGKVKQFKL 166

Query: 306  MWQLLEEFKREGFLFRLKTLEVIFQSYVRAGSIEDSMEAFKRLCRLDDSVGTAALNSLIR 485
            +W L+ E KR+  L    T  +I + Y RA  + ++++AF+++ +          N LI 
Sbjct: 167  IWDLVSEMKRKRLLTN-DTFALISRRYARARRVNEAIDAFEKMDKFGLKQELPDFNRLID 225

Query: 486  VLCMENRKNDCRLVLRRLKEK-CPPNEMTYSILIHAFCEGNKLSEALNIFVEMVQNNIQP 662
             LC        + V  ++K++   P+  +Y+IL+  + +   L     ++ EM  +  +P
Sbjct: 226  TLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEP 285

Query: 663  SLATYSYIIKALSANKQTEFAQKLFDHMKAY-----------ALRKFGRTPEVGEFLTDT 809
             + +Y  +I A  + K+ + A +LF  M+A             +   G    + E L   
Sbjct: 286  DVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFF 345

Query: 810  GLLDEGPSNFDSKAYXXXXXXXXXXXXXXXXXXXXXXMVKKGFTPSSKTYSSIFSHLCRK 989
            G   +     ++  Y                      M K G  P+S+TY  +  HL + 
Sbjct: 346  GQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNSRTYDIVLHHLIKA 405

Query: 990  RKSREAFELFNIVVATSHF-PDLQTLNTLIETFCSTGHVGIAMELWYMMQEKGYGCNRES 1166
             ++ EA+ +F  +       P + T   ++  FC    V +AM +W  M+ +G       
Sbjct: 406  GRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHM 465

Query: 1167 YSVFIHGLCYNSLFEDAFFYFNEMVQNGIVPLFETYRKLLYGL 1295
            YS  I+ LC+    +DA  YF EM+  GI P  + +  L   L
Sbjct: 466  YSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 508


>ref|XP_002307458.2| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|550339385|gb|EEE94454.2|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 478

 Score =  145 bits (366), Expect = 4e-32
 Identities = 99/415 (23%), Positives = 186/415 (44%), Gaps = 14/415 (3%)
 Frame = +3

Query: 150  EFVMSVMELVLNEWELGLRTFLWAKQQLNYKHTTEAYELIVHILGNAKKFDIMWQLLEEF 329
            + V  V++   N   +  R F WA++Q +Y H+ +A+  ++  L   +++ +MW +++  
Sbjct: 61   QIVDDVLKKFENAGMVAYRFFEWAEKQRHYNHSVKAFHTVIDSLAKIRQYQLMWDVVKVM 120

Query: 330  KREGFLFRLKTLEVIFQSYVRAGSIEDSMEAFKRLCRLDDSVGTAALNSLIRVLCMENRK 509
            K +  +  ++T  +I + Y RA  +E+++  F  + + D     AA N L+  LC     
Sbjct: 121  KSKRMV-NVETFCIIMRKYARAQKVEEAVYTFNIMDKYDVPPNLAAFNGLLSALCKSKNV 179

Query: 510  NDCRLVLRRLKEKCPPNEMTYSILIHAFCEGNKLSEALNIFVEMVQNNIQPSLATYSYII 689
               + +   +K++  P+  TYSIL+  + +   L +A  IF EMV N  +P + TY  ++
Sbjct: 180  RKAQEIFDSIKDRFVPDSKTYSILLEGWGKDPNLPKAREIFREMVSNGCRPDIVTYGIMV 239

Query: 690  KALSANKQTEFAQKLFDHMKAYALRKFGRTPEVGEFLTDT----GLLDEGPSNF------ 839
              L    + + A  + + M +   +    TP +   L  T      +++  S F      
Sbjct: 240  DVLCKAGRVDEALGIVNEMDSTVCKP---TPFIYSVLVHTYGIENRIEDAVSTFLEMENN 296

Query: 840  ----DSKAYXXXXXXXXXXXXXXXXXXXXXXMVKKGFTPSSKTYSSIFSHLCRKRKSREA 1007
                D   Y                      M  KG TP+S+T++ I S L  + ++ EA
Sbjct: 297  GIEPDVAVYNALIGAFCKANRLKNVYRVLNEMDCKGVTPNSRTFNIILSSLIGRGETDEA 356

Query: 1008 FELFNIVVATSHFPDLQTLNTLIETFCSTGHVGIAMELWYMMQEKGYGCNRESYSVFIHG 1187
            + +F  ++     PD  T   +I+ FC    +  A+++W  M+ K +  +  ++ V I+G
Sbjct: 357  YRVFLRMIKVCE-PDADTYTMMIKMFCERDELKKALKVWKYMKLKRFMPSMHTFQVLING 415

Query: 1188 LCYNSLFEDAFFYFNEMVQNGIVPLFETYRKLLYGLLRGNNPDMLADLSSIVGEL 1352
            LC       A     EM++ GI P   T+ +L   L++    D+L  L   +  L
Sbjct: 416  LCEKGDVTQACVLLEEMIEKGIRPSGVTFGRLRQLLIKEGREDVLKFLQKKINVL 470