BLASTX nr result
ID: Ephedra28_contig00021914
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00021914
(650 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ESW16088.1| hypothetical protein PHAVU_007G128200g [Phaseolus... 78 2e-12
ref|NP_196600.1| E3 ubiquitin-protein ligase RING1 [Arabidopsis ... 74 3e-11
ref|XP_002871419.1| hypothetical protein ARALYDRAFT_350245 [Arab... 74 3e-11
ref|XP_003628792.1| hypothetical protein MTR_8g066780 [Medicago ... 74 4e-11
ref|NP_179455.1| putative RING-H2 finger protein ATL49 [Arabidop... 74 5e-11
ref|XP_002886188.1| hypothetical protein ARALYDRAFT_480768 [Arab... 74 5e-11
gb|AFW71246.1| putative RING zinc finger domain superfamily prot... 73 6e-11
ref|XP_003517915.1| PREDICTED: RING-H2 finger protein ATL51-like... 73 6e-11
gb|ESW27396.1| hypothetical protein PHAVU_003G198400g [Phaseolus... 73 8e-11
gb|EOY23974.1| RING/U-box superfamily protein, putative [Theobro... 73 8e-11
ref|XP_006299324.1| hypothetical protein CARUB_v10015481mg [Caps... 73 8e-11
ref|NP_001057231.1| Os06g0233200 [Oryza sativa Japonica Group] g... 72 1e-10
ref|XP_003550745.1| PREDICTED: RING-H2 finger protein ATL47-like... 72 1e-10
ref|XP_003531535.1| PREDICTED: RING-H2 finger protein ATL54-like... 72 1e-10
ref|XP_002529293.1| ring finger protein, putative [Ricinus commu... 72 1e-10
ref|XP_004300406.1| PREDICTED: RING-H2 finger protein ATL51-like... 72 2e-10
ref|XP_003612874.1| RING-H2 finger protein ATL3A [Medicago trunc... 72 2e-10
ref|NP_567846.1| RING-H2 finger protein ATL13 [Arabidopsis thali... 71 2e-10
ref|XP_006428433.1| hypothetical protein CICLE_v10013874mg, part... 71 2e-10
ref|XP_006412710.1| hypothetical protein EUTSA_v10025087mg [Eutr... 71 2e-10
>gb|ESW16088.1| hypothetical protein PHAVU_007G128200g [Phaseolus vulgaris]
Length = 353
Score = 78.2 bits (191), Expect = 2e-12
Identities = 32/65 (49%), Positives = 45/65 (69%)
Frame = +1
Query: 217 FECQNDGTSHECSICLCNADEDRKMVLLPLCRHVFHLHCLDAWLRFHHNCPMCRTSLFSL 396
++ Q DG S EC++CL ED K+ ++P C HVFH+ C+D WL+ + NCP+CRTS+ SL
Sbjct: 115 YKTQGDGDSGECAVCLNEFQEDEKLRIIPNCSHVFHIDCIDVWLQSNANCPLCRTSI-SL 173
Query: 397 TESHH 411
T H
Sbjct: 174 TSRFH 178
>ref|NP_196600.1| E3 ubiquitin-protein ligase RING1 [Arabidopsis thaliana]
gi|68565313|sp|Q9LX93.1|ATL55_ARATH RecName: Full=E3
ubiquitin-protein ligase RING1; AltName: Full=RING-H2
finger protein ATL55 gi|7671465|emb|CAB89405.1| putative
protein [Arabidopsis thaliana]
gi|51971142|dbj|BAD44263.1| putative protein
[Arabidopsis thaliana] gi|332004151|gb|AED91534.1| E3
ubiquitin-protein ligase RING1 [Arabidopsis thaliana]
Length = 301
Score = 74.3 bits (181), Expect = 3e-11
Identities = 31/60 (51%), Positives = 39/60 (65%)
Frame = +1
Query: 232 DGTSHECSICLCNADEDRKMVLLPLCRHVFHLHCLDAWLRFHHNCPMCRTSLFSLTESHH 411
DGT ECS+CL +ED + LLP C H FHL+C+D WL H NCP+CR + +TE H
Sbjct: 131 DGT--ECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAPVLLITEPPH 188
>ref|XP_002871419.1| hypothetical protein ARALYDRAFT_350245 [Arabidopsis lyrata subsp.
lyrata] gi|297317256|gb|EFH47678.1| hypothetical protein
ARALYDRAFT_350245 [Arabidopsis lyrata subsp. lyrata]
Length = 306
Score = 74.3 bits (181), Expect = 3e-11
Identities = 31/60 (51%), Positives = 39/60 (65%)
Frame = +1
Query: 232 DGTSHECSICLCNADEDRKMVLLPLCRHVFHLHCLDAWLRFHHNCPMCRTSLFSLTESHH 411
DGT ECS+CL +ED + LLP C H FH++C+D WL H NCP+CR + LTE H
Sbjct: 135 DGT--ECSVCLNEFEEDESLRLLPKCSHAFHINCIDTWLLSHKNCPLCRAPVLLLTEPPH 192
>ref|XP_003628792.1| hypothetical protein MTR_8g066780 [Medicago truncatula]
gi|355522814|gb|AET03268.1| hypothetical protein
MTR_8g066780 [Medicago truncatula]
Length = 356
Score = 73.9 bits (180), Expect = 4e-11
Identities = 28/65 (43%), Positives = 43/65 (66%)
Frame = +1
Query: 238 TSHECSICLCNADEDRKMVLLPLCRHVFHLHCLDAWLRFHHNCPMCRTSLFSLTESHHSI 417
T +CS+CL +D + LLP+C HVFHL C+D WL+ + +CP+CR+S+F+ S H +
Sbjct: 138 TVTDCSVCLSEFQDDESVRLLPMCNHVFHLPCIDTWLKSNSSCPLCRSSVFTSNASTHHV 197
Query: 418 DIKNT 432
+ T
Sbjct: 198 QVPVT 202
>ref|NP_179455.1| putative RING-H2 finger protein ATL49 [Arabidopsis thaliana]
gi|68565344|sp|Q9ZV53.1|ATL49_ARATH RecName:
Full=Putative RING-H2 finger protein ATL49; AltName:
Full=Protein MATERNAL EFFECT EMBRYO ARREST 16
gi|4185131|gb|AAD08934.1| putative RING zinc finger
protein [Arabidopsis thaliana]
gi|330251695|gb|AEC06789.1| putative RING-H2 finger
protein ATL49 [Arabidopsis thaliana]
Length = 423
Score = 73.6 bits (179), Expect = 5e-11
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Frame = +1
Query: 175 NDGVVMSVRSLLPSFECQN----DGTSHECSICLCNADEDRKMVLLPLCRHVFHLHCLDA 342
+ GV S+ LP F ++ + +C +CLC + + K+ LLP C H FH+ C+D
Sbjct: 97 DSGVDQSLIDTLPVFHYKSIVGLKISPFDCPVCLCEFETEDKLRLLPKCSHAFHVECIDT 156
Query: 343 WLRFHHNCPMCRTSLFSLTESHHSI 417
WL H CP+CR++L S SHH++
Sbjct: 157 WLLSHSTCPLCRSNLLSGFSSHHNL 181
>ref|XP_002886188.1| hypothetical protein ARALYDRAFT_480768 [Arabidopsis lyrata subsp.
lyrata] gi|297332028|gb|EFH62447.1| hypothetical protein
ARALYDRAFT_480768 [Arabidopsis lyrata subsp. lyrata]
Length = 413
Score = 73.6 bits (179), Expect = 5e-11
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Frame = +1
Query: 175 NDGVVMSVRSLLPSFECQN----DGTSHECSICLCNADEDRKMVLLPLCRHVFHLHCLDA 342
+ GV S+ LP F ++ + +C +CLC + + K+ LLP C H FH+ C+D
Sbjct: 88 DSGVDQSLIDTLPVFHYKSIIGLKISPFDCPVCLCEFETEDKLRLLPKCSHAFHVECIDT 147
Query: 343 WLRFHHNCPMCRTSLFSLTESHHSI 417
WL H CP+CR++L S SHH++
Sbjct: 148 WLLSHSTCPLCRSNLLSGFSSHHNL 172
>gb|AFW71246.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 243
Score = 73.2 bits (178), Expect = 6e-11
Identities = 34/72 (47%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Frame = +1
Query: 178 DGVVMSVRSLLPSFECQNDGT-SHECSICLCNADEDRKMVLLPLCRHVFHLHCLDAWLRF 354
D VVM P+++ Q+DG S C+ICL + D++ LPLC HVFH HC+D WLR
Sbjct: 169 DDVVMQ-----PTYKQQSDGEPSKYCAICLADVDKEEAAKQLPLCLHVFHRHCIDQWLRG 223
Query: 355 HHNCPMCRTSLF 390
H CP+CR + F
Sbjct: 224 HSTCPICRCNAF 235
>ref|XP_003517915.1| PREDICTED: RING-H2 finger protein ATL51-like [Glycine max]
Length = 348
Score = 73.2 bits (178), Expect = 6e-11
Identities = 27/65 (41%), Positives = 41/65 (63%)
Frame = +1
Query: 247 ECSICLCNADEDRKMVLLPLCRHVFHLHCLDAWLRFHHNCPMCRTSLFSLTESHHSIDIK 426
+CS+CL +D + LLP C HVFH C+D WL+ H +CP+CR +F+ T S ++
Sbjct: 140 DCSVCLSEFQDDESVRLLPKCSHVFHAPCIDTWLKSHSSCPLCRAGIFTFTSSQVEVEAP 199
Query: 427 NTAKT 441
+T +T
Sbjct: 200 STNET 204
>gb|ESW27396.1| hypothetical protein PHAVU_003G198400g [Phaseolus vulgaris]
Length = 336
Score = 72.8 bits (177), Expect = 8e-11
Identities = 35/88 (39%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Frame = +1
Query: 157 MHDDEQNDGVVMSVRSLLPSFECQNDGTSHE---CSICLCNADEDRKMVLLPLCRHVFHL 327
+HD + ++ S LP F Q+ S E C++CLC ED K+ LLP+C H FH+
Sbjct: 114 LHDSGLDQALIDS----LPVFRYQDLLGSKEPFDCAVCLCEFSEDDKLRLLPMCTHAFHM 169
Query: 328 HCLDAWLRFHHNCPMCRTSLFSLTESHH 411
+CLD WL + CP+CR SL + E+ +
Sbjct: 170 NCLDTWLLSNSTCPLCRASLSNYVENQN 197
>gb|EOY23974.1| RING/U-box superfamily protein, putative [Theobroma cacao]
Length = 370
Score = 72.8 bits (177), Expect = 8e-11
Identities = 26/53 (49%), Positives = 36/53 (67%)
Frame = +1
Query: 247 ECSICLCNADEDRKMVLLPLCRHVFHLHCLDAWLRFHHNCPMCRTSLFSLTES 405
+CS+CL ED + LLP C H FH+HC+D WLR H NCP+CR ++ ++ S
Sbjct: 142 DCSVCLSEFQEDESLRLLPKCSHAFHVHCIDTWLRSHSNCPLCRANIIFISAS 194
>ref|XP_006299324.1| hypothetical protein CARUB_v10015481mg [Capsella rubella]
gi|482568033|gb|EOA32222.1| hypothetical protein
CARUB_v10015481mg [Capsella rubella]
Length = 416
Score = 72.8 bits (177), Expect = 8e-11
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Frame = +1
Query: 175 NDGVVMSVRSLLPSFECQN----DGTSHECSICLCNADEDRKMVLLPLCRHVFHLHCLDA 342
+ GV S+ LP F+ ++ + +C +CLC + + K+ LLP C H FH+ C+D
Sbjct: 87 DSGVDQSLIDTLPVFQYKSIMGLKISPFDCPVCLCEFETEDKLRLLPECSHAFHVDCIDT 146
Query: 343 WLRFHHNCPMCRTSLFSLTESHHS 414
WL H CP+CR++L S SHH+
Sbjct: 147 WLLSHSTCPLCRSNLLSGFSSHHN 170
>ref|NP_001057231.1| Os06g0233200 [Oryza sativa Japonica Group]
gi|51535192|dbj|BAD38165.1| putative RING finger 1
[Oryza sativa Japonica Group]
gi|113595271|dbj|BAF19145.1| Os06g0233200 [Oryza sativa
Japonica Group] gi|125554660|gb|EAZ00266.1| hypothetical
protein OsI_22277 [Oryza sativa Indica Group]
gi|215766038|dbj|BAG98266.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|222635260|gb|EEE65392.1| hypothetical protein
OsJ_20714 [Oryza sativa Japonica Group]
Length = 436
Score = 72.4 bits (176), Expect = 1e-10
Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Frame = +1
Query: 187 VMSVRSLLPSFECQNDGTSHECSICLCNADEDRKMVLLPLCRHVFHLHCLDAWLRFHHNC 366
V + R ++ D +C++CLC D + ++ LLPLC H FHLHC+D WL + C
Sbjct: 169 VFAYREIVVGGGGDGDKEPFDCAVCLCEFDAEDRLRLLPLCGHAFHLHCIDTWLLSNSTC 228
Query: 367 PMCRTSLF--SLTESHHSID 420
P+CR LF LTE++ D
Sbjct: 229 PLCRGVLFVPGLTENNPMFD 248
>ref|XP_003550745.1| PREDICTED: RING-H2 finger protein ATL47-like [Glycine max]
Length = 319
Score = 72.0 bits (175), Expect = 1e-10
Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Frame = +1
Query: 175 NDGVVMSVRSLLPSFECQND--GTSH--ECSICLCNADEDRKMVLLPLCRHVFHLHCLDA 342
+ G+ +V LP F C D G+ +C++CLC ED K+ LLP+C H FH++CLD
Sbjct: 107 DSGLDQAVIDALPVF-CYQDLLGSKEPFDCAVCLCEFSEDDKLRLLPMCTHAFHMNCLDT 165
Query: 343 WLRFHHNCPMCRTSLFSLTESHH 411
WL + CP+CR SL E+ +
Sbjct: 166 WLLSNSTCPLCRASLSEYMENQN 188
>ref|XP_003531535.1| PREDICTED: RING-H2 finger protein ATL54-like [Glycine max]
Length = 403
Score = 72.0 bits (175), Expect = 1e-10
Identities = 28/58 (48%), Positives = 37/58 (63%)
Frame = +1
Query: 247 ECSICLCNADEDRKMVLLPLCRHVFHLHCLDAWLRFHHNCPMCRTSLFSLTESHHSID 420
+C++CL ED + LLP C+H FHL C+D WLR H NCPMCR + + ES +D
Sbjct: 180 DCAVCLSEFQEDENLRLLPKCQHAFHLPCIDTWLRSHTNCPMCRAPIVAEIESSSFVD 237
>ref|XP_002529293.1| ring finger protein, putative [Ricinus communis]
gi|223531217|gb|EEF33062.1| ring finger protein,
putative [Ricinus communis]
Length = 376
Score = 72.0 bits (175), Expect = 1e-10
Identities = 33/87 (37%), Positives = 51/87 (58%), Gaps = 9/87 (10%)
Frame = +1
Query: 172 QNDGVVMSVRSLLPSFECQNDG---------TSHECSICLCNADEDRKMVLLPLCRHVFH 324
+N G+ SV +P F+ + +G T EC++CL E+ K+ ++P C HVFH
Sbjct: 98 ENRGLDESVIRSIPIFKFKKEGNGSGDIGGRTLSECAVCLNEFQENEKLRIIPNCSHVFH 157
Query: 325 LHCLDAWLRFHHNCPMCRTSLFSLTES 405
+ C+D WL+ + NCP+CR S+ S T S
Sbjct: 158 IDCIDVWLQNNANCPLCRNSISSTTRS 184
>ref|XP_004300406.1| PREDICTED: RING-H2 finger protein ATL51-like [Fragaria vesca subsp.
vesca]
Length = 367
Score = 71.6 bits (174), Expect = 2e-10
Identities = 27/58 (46%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Frame = +1
Query: 247 ECSICLCNADEDRKMVLLPLCRHVFHLHCLDAWLRFHHNCPMCRTSLFSL-TESHHSI 417
+C++CL +ED + LLP C H FHL C+D WL+ H NCP+CR S+ S +HH +
Sbjct: 149 DCAVCLSEFEEDESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRASVVSTNAPTHHQV 206
>ref|XP_003612874.1| RING-H2 finger protein ATL3A [Medicago truncatula]
gi|355514209|gb|AES95832.1| RING-H2 finger protein ATL3A
[Medicago truncatula]
Length = 481
Score = 71.6 bits (174), Expect = 2e-10
Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Frame = +1
Query: 226 QNDGTSH--ECSICLCNADEDRKMVLLPLCRHVFHLHCLDAWLRFHHNCPMCRTSLFSLT 399
+NDG +CS+CL +D + LLP C H FHL C+D WL+ H NCP+CR ++F+
Sbjct: 138 KNDGLVDVTDCSVCLNEFQDDESIRLLPKCSHAFHLPCIDTWLKSHSNCPLCRATIFAFN 197
Query: 400 ESHHS 414
S+ S
Sbjct: 198 SSNSS 202
>ref|NP_567846.1| RING-H2 finger protein ATL13 [Arabidopsis thaliana]
gi|68565248|sp|Q940Q4.2|ATL13_ARATH RecName:
Full=RING-H2 finger protein ATL13
gi|332660360|gb|AEE85760.1| RING-H2 finger protein ATL13
[Arabidopsis thaliana]
Length = 472
Score = 71.2 bits (173), Expect = 2e-10
Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Frame = +1
Query: 175 NDGVVMSVRSLLPSFECQN----DGTSHECSICLCNADEDRKMVLLPLCRHVFHLHCLDA 342
+ GV S LP F ++ +C++CLC + + K+ LLP C H FH+ C+D
Sbjct: 105 DSGVDQSFIDTLPVFHYKSIIGLKNYPFDCAVCLCEFETEDKLRLLPKCSHAFHMDCIDT 164
Query: 343 WLRFHHNCPMCRTSLFSLTESH 408
WL H CP+CR+SL S SH
Sbjct: 165 WLLSHSTCPLCRSSLLSDLSSH 186
>ref|XP_006428433.1| hypothetical protein CICLE_v10013874mg, partial [Citrus clementina]
gi|557530490|gb|ESR41673.1| hypothetical protein
CICLE_v10013874mg, partial [Citrus clementina]
Length = 278
Score = 71.2 bits (173), Expect = 2e-10
Identities = 26/53 (49%), Positives = 37/53 (69%)
Frame = +1
Query: 247 ECSICLCNADEDRKMVLLPLCRHVFHLHCLDAWLRFHHNCPMCRTSLFSLTES 405
+CS+CL +ED + LLP C H FH+ C+D WL+ H NCP+CR +LF ++ S
Sbjct: 148 DCSVCLSEFEEDESLRLLPKCNHAFHVACVDRWLKSHSNCPLCRANLFLISAS 200
>ref|XP_006412710.1| hypothetical protein EUTSA_v10025087mg [Eutrema salsugineum]
gi|557113880|gb|ESQ54163.1| hypothetical protein
EUTSA_v10025087mg [Eutrema salsugineum]
Length = 476
Score = 71.2 bits (173), Expect = 2e-10
Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Frame = +1
Query: 175 NDGVVMSVRSLLPSFECQN----DGTSHECSICLCNADEDRKMVLLPLCRHVFHLHCLDA 342
+ GV S LP F ++ +C++CLC + + K+ LLP C H FH+ C+D
Sbjct: 105 DSGVDQSFIDTLPVFHYKSIIGLKNYPFDCAVCLCEFETEDKLRLLPKCSHAFHMDCIDT 164
Query: 343 WLRFHHNCPMCRTSLFSLTESH 408
WL H CP+CR+SL S SH
Sbjct: 165 WLLSHSTCPLCRSSLLSDLSSH 186