BLASTX nr result
ID: Ephedra28_contig00021913
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00021913
(484 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ESW16088.1| hypothetical protein PHAVU_007G128200g [Phaseolus... 76 5e-12
ref|NP_196600.1| E3 ubiquitin-protein ligase RING1 [Arabidopsis ... 75 9e-12
ref|XP_002871419.1| hypothetical protein ARALYDRAFT_350245 [Arab... 75 9e-12
ref|NP_179455.1| putative RING-H2 finger protein ATL49 [Arabidop... 75 1e-11
ref|XP_002886188.1| hypothetical protein ARALYDRAFT_480768 [Arab... 75 1e-11
gb|ESW27396.1| hypothetical protein PHAVU_003G198400g [Phaseolus... 74 2e-11
ref|NP_001057231.1| Os06g0233200 [Oryza sativa Japonica Group] g... 74 2e-11
ref|XP_006299324.1| hypothetical protein CARUB_v10015481mg [Caps... 74 2e-11
gb|EOY23974.1| RING/U-box superfamily protein, putative [Theobro... 74 3e-11
ref|XP_003550745.1| PREDICTED: RING-H2 finger protein ATL47-like... 73 3e-11
ref|XP_003531535.1| PREDICTED: RING-H2 finger protein ATL54-like... 73 4e-11
ref|XP_003628792.1| hypothetical protein MTR_8g066780 [Medicago ... 73 4e-11
ref|NP_567846.1| RING-H2 finger protein ATL13 [Arabidopsis thali... 72 6e-11
ref|XP_006412710.1| hypothetical protein EUTSA_v10025087mg [Eutr... 72 6e-11
ref|XP_006285480.1| hypothetical protein CARUB_v10006908mg [Caps... 72 6e-11
ref|XP_004300406.1| PREDICTED: RING-H2 finger protein ATL51-like... 72 6e-11
gb|AAL06848.1| AT4g30400/F17I23_260 [Arabidopsis thaliana] gi|21... 72 6e-11
ref|XP_003612874.1| RING-H2 finger protein ATL3A [Medicago trunc... 72 6e-11
ref|XP_002869380.1| zinc finger family protein [Arabidopsis lyra... 72 6e-11
ref|XP_002436619.1| hypothetical protein SORBIDRAFT_10g005930 [S... 72 6e-11
>gb|ESW16088.1| hypothetical protein PHAVU_007G128200g [Phaseolus vulgaris]
Length = 353
Score = 75.9 bits (185), Expect = 5e-12
Identities = 31/65 (47%), Positives = 44/65 (67%)
Frame = +3
Query: 216 FECQNDGTSHECSICLCNADEDGKMVLLPLCRHAFHLHCLDAWLRFHHNCPMCRTSLFSL 395
++ Q DG S EC++CL ED K+ ++P C H FH+ C+D WL+ + NCP+CRTS+ SL
Sbjct: 115 YKTQGDGDSGECAVCLNEFQEDEKLRIIPNCSHVFHIDCIDVWLQSNANCPLCRTSI-SL 173
Query: 396 TESHH 410
T H
Sbjct: 174 TSRFH 178
>ref|NP_196600.1| E3 ubiquitin-protein ligase RING1 [Arabidopsis thaliana]
gi|68565313|sp|Q9LX93.1|ATL55_ARATH RecName: Full=E3
ubiquitin-protein ligase RING1; AltName: Full=RING-H2
finger protein ATL55 gi|7671465|emb|CAB89405.1| putative
protein [Arabidopsis thaliana]
gi|51971142|dbj|BAD44263.1| putative protein
[Arabidopsis thaliana] gi|332004151|gb|AED91534.1| E3
ubiquitin-protein ligase RING1 [Arabidopsis thaliana]
Length = 301
Score = 75.1 bits (183), Expect = 9e-12
Identities = 32/60 (53%), Positives = 40/60 (66%)
Frame = +3
Query: 231 DGTSHECSICLCNADEDGKMVLLPLCRHAFHLHCLDAWLRFHHNCPMCRTSLFSLTESHH 410
DGT ECS+CL +ED + LLP C HAFHL+C+D WL H NCP+CR + +TE H
Sbjct: 131 DGT--ECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAPVLLITEPPH 188
>ref|XP_002871419.1| hypothetical protein ARALYDRAFT_350245 [Arabidopsis lyrata subsp.
lyrata] gi|297317256|gb|EFH47678.1| hypothetical protein
ARALYDRAFT_350245 [Arabidopsis lyrata subsp. lyrata]
Length = 306
Score = 75.1 bits (183), Expect = 9e-12
Identities = 32/60 (53%), Positives = 40/60 (66%)
Frame = +3
Query: 231 DGTSHECSICLCNADEDGKMVLLPLCRHAFHLHCLDAWLRFHHNCPMCRTSLFSLTESHH 410
DGT ECS+CL +ED + LLP C HAFH++C+D WL H NCP+CR + LTE H
Sbjct: 135 DGT--ECSVCLNEFEEDESLRLLPKCSHAFHINCIDTWLLSHKNCPLCRAPVLLLTEPPH 192
>ref|NP_179455.1| putative RING-H2 finger protein ATL49 [Arabidopsis thaliana]
gi|68565344|sp|Q9ZV53.1|ATL49_ARATH RecName:
Full=Putative RING-H2 finger protein ATL49; AltName:
Full=Protein MATERNAL EFFECT EMBRYO ARREST 16
gi|4185131|gb|AAD08934.1| putative RING zinc finger
protein [Arabidopsis thaliana]
gi|330251695|gb|AEC06789.1| putative RING-H2 finger
protein ATL49 [Arabidopsis thaliana]
Length = 423
Score = 74.7 bits (182), Expect = 1e-11
Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Frame = +3
Query: 174 NDGVVLSVRSLLPSFECQN----DGTSHECSICLCNADEDGKMVLLPLCRHAFHLHCLDA 341
+ GV S+ LP F ++ + +C +CLC + + K+ LLP C HAFH+ C+D
Sbjct: 97 DSGVDQSLIDTLPVFHYKSIVGLKISPFDCPVCLCEFETEDKLRLLPKCSHAFHVECIDT 156
Query: 342 WLRFHHNCPMCRTSLFSLTESHHSI 416
WL H CP+CR++L S SHH++
Sbjct: 157 WLLSHSTCPLCRSNLLSGFSSHHNL 181
>ref|XP_002886188.1| hypothetical protein ARALYDRAFT_480768 [Arabidopsis lyrata subsp.
lyrata] gi|297332028|gb|EFH62447.1| hypothetical protein
ARALYDRAFT_480768 [Arabidopsis lyrata subsp. lyrata]
Length = 413
Score = 74.7 bits (182), Expect = 1e-11
Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Frame = +3
Query: 174 NDGVVLSVRSLLPSFECQN----DGTSHECSICLCNADEDGKMVLLPLCRHAFHLHCLDA 341
+ GV S+ LP F ++ + +C +CLC + + K+ LLP C HAFH+ C+D
Sbjct: 88 DSGVDQSLIDTLPVFHYKSIIGLKISPFDCPVCLCEFETEDKLRLLPKCSHAFHVECIDT 147
Query: 342 WLRFHHNCPMCRTSLFSLTESHHSI 416
WL H CP+CR++L S SHH++
Sbjct: 148 WLLSHSTCPLCRSNLLSGFSSHHNL 172
>gb|ESW27396.1| hypothetical protein PHAVU_003G198400g [Phaseolus vulgaris]
Length = 336
Score = 74.3 bits (181), Expect = 2e-11
Identities = 36/88 (40%), Positives = 52/88 (59%), Gaps = 3/88 (3%)
Frame = +3
Query: 156 MHDDEQNDGVVLSVRSLLPSFECQNDGTSHE---CSICLCNADEDGKMVLLPLCRHAFHL 326
+HD + ++ S LP F Q+ S E C++CLC ED K+ LLP+C HAFH+
Sbjct: 114 LHDSGLDQALIDS----LPVFRYQDLLGSKEPFDCAVCLCEFSEDDKLRLLPMCTHAFHM 169
Query: 327 HCLDAWLRFHHNCPMCRTSLFSLTESHH 410
+CLD WL + CP+CR SL + E+ +
Sbjct: 170 NCLDTWLLSNSTCPLCRASLSNYVENQN 197
>ref|NP_001057231.1| Os06g0233200 [Oryza sativa Japonica Group]
gi|51535192|dbj|BAD38165.1| putative RING finger 1
[Oryza sativa Japonica Group]
gi|113595271|dbj|BAF19145.1| Os06g0233200 [Oryza sativa
Japonica Group] gi|125554660|gb|EAZ00266.1| hypothetical
protein OsI_22277 [Oryza sativa Indica Group]
gi|215766038|dbj|BAG98266.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|222635260|gb|EEE65392.1| hypothetical protein
OsJ_20714 [Oryza sativa Japonica Group]
Length = 436
Score = 74.3 bits (181), Expect = 2e-11
Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Frame = +3
Query: 186 VLSVRSLLPSFECQNDGTSHECSICLCNADEDGKMVLLPLCRHAFHLHCLDAWLRFHHNC 365
V + R ++ D +C++CLC D + ++ LLPLC HAFHLHC+D WL + C
Sbjct: 169 VFAYREIVVGGGGDGDKEPFDCAVCLCEFDAEDRLRLLPLCGHAFHLHCIDTWLLSNSTC 228
Query: 366 PMCRTSLF--SLTESHHSID 419
P+CR LF LTE++ D
Sbjct: 229 PLCRGVLFVPGLTENNPMFD 248
>ref|XP_006299324.1| hypothetical protein CARUB_v10015481mg [Capsella rubella]
gi|482568033|gb|EOA32222.1| hypothetical protein
CARUB_v10015481mg [Capsella rubella]
Length = 416
Score = 73.9 bits (180), Expect = 2e-11
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 4/84 (4%)
Frame = +3
Query: 174 NDGVVLSVRSLLPSFECQN----DGTSHECSICLCNADEDGKMVLLPLCRHAFHLHCLDA 341
+ GV S+ LP F+ ++ + +C +CLC + + K+ LLP C HAFH+ C+D
Sbjct: 87 DSGVDQSLIDTLPVFQYKSIMGLKISPFDCPVCLCEFETEDKLRLLPECSHAFHVDCIDT 146
Query: 342 WLRFHHNCPMCRTSLFSLTESHHS 413
WL H CP+CR++L S SHH+
Sbjct: 147 WLLSHSTCPLCRSNLLSGFSSHHN 170
>gb|EOY23974.1| RING/U-box superfamily protein, putative [Theobroma cacao]
Length = 370
Score = 73.6 bits (179), Expect = 3e-11
Identities = 27/53 (50%), Positives = 37/53 (69%)
Frame = +3
Query: 246 ECSICLCNADEDGKMVLLPLCRHAFHLHCLDAWLRFHHNCPMCRTSLFSLTES 404
+CS+CL ED + LLP C HAFH+HC+D WLR H NCP+CR ++ ++ S
Sbjct: 142 DCSVCLSEFQEDESLRLLPKCSHAFHVHCIDTWLRSHSNCPLCRANIIFISAS 194
>ref|XP_003550745.1| PREDICTED: RING-H2 finger protein ATL47-like [Glycine max]
Length = 319
Score = 73.2 bits (178), Expect = 3e-11
Identities = 35/83 (42%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Frame = +3
Query: 174 NDGVVLSVRSLLPSFECQND--GTSH--ECSICLCNADEDGKMVLLPLCRHAFHLHCLDA 341
+ G+ +V LP F C D G+ +C++CLC ED K+ LLP+C HAFH++CLD
Sbjct: 107 DSGLDQAVIDALPVF-CYQDLLGSKEPFDCAVCLCEFSEDDKLRLLPMCTHAFHMNCLDT 165
Query: 342 WLRFHHNCPMCRTSLFSLTESHH 410
WL + CP+CR SL E+ +
Sbjct: 166 WLLSNSTCPLCRASLSEYMENQN 188
>ref|XP_003531535.1| PREDICTED: RING-H2 finger protein ATL54-like [Glycine max]
Length = 403
Score = 72.8 bits (177), Expect = 4e-11
Identities = 29/58 (50%), Positives = 38/58 (65%)
Frame = +3
Query: 246 ECSICLCNADEDGKMVLLPLCRHAFHLHCLDAWLRFHHNCPMCRTSLFSLTESHHSID 419
+C++CL ED + LLP C+HAFHL C+D WLR H NCPMCR + + ES +D
Sbjct: 180 DCAVCLSEFQEDENLRLLPKCQHAFHLPCIDTWLRSHTNCPMCRAPIVAEIESSSFVD 237
>ref|XP_003628792.1| hypothetical protein MTR_8g066780 [Medicago truncatula]
gi|355522814|gb|AET03268.1| hypothetical protein
MTR_8g066780 [Medicago truncatula]
Length = 356
Score = 72.8 bits (177), Expect = 4e-11
Identities = 27/66 (40%), Positives = 43/66 (65%)
Frame = +3
Query: 237 TSHECSICLCNADEDGKMVLLPLCRHAFHLHCLDAWLRFHHNCPMCRTSLFSLTESHHSI 416
T +CS+CL +D + LLP+C H FHL C+D WL+ + +CP+CR+S+F+ S H +
Sbjct: 138 TVTDCSVCLSEFQDDESVRLLPMCNHVFHLPCIDTWLKSNSSCPLCRSSVFTSNASTHHV 197
Query: 417 DIKNTV 434
+ T+
Sbjct: 198 QVPVTI 203
>ref|NP_567846.1| RING-H2 finger protein ATL13 [Arabidopsis thaliana]
gi|68565248|sp|Q940Q4.2|ATL13_ARATH RecName:
Full=RING-H2 finger protein ATL13
gi|332660360|gb|AEE85760.1| RING-H2 finger protein ATL13
[Arabidopsis thaliana]
Length = 472
Score = 72.4 bits (176), Expect = 6e-11
Identities = 27/54 (50%), Positives = 37/54 (68%)
Frame = +3
Query: 246 ECSICLCNADEDGKMVLLPLCRHAFHLHCLDAWLRFHHNCPMCRTSLFSLTESH 407
+C++CLC + + K+ LLP C HAFH+ C+D WL H CP+CR+SL S SH
Sbjct: 133 DCAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCRSSLLSDLSSH 186
>ref|XP_006412710.1| hypothetical protein EUTSA_v10025087mg [Eutrema salsugineum]
gi|557113880|gb|ESQ54163.1| hypothetical protein
EUTSA_v10025087mg [Eutrema salsugineum]
Length = 476
Score = 72.4 bits (176), Expect = 6e-11
Identities = 27/54 (50%), Positives = 37/54 (68%)
Frame = +3
Query: 246 ECSICLCNADEDGKMVLLPLCRHAFHLHCLDAWLRFHHNCPMCRTSLFSLTESH 407
+C++CLC + + K+ LLP C HAFH+ C+D WL H CP+CR+SL S SH
Sbjct: 133 DCAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCRSSLLSDLSSH 186
>ref|XP_006285480.1| hypothetical protein CARUB_v10006908mg [Capsella rubella]
gi|482554185|gb|EOA18378.1| hypothetical protein
CARUB_v10006908mg [Capsella rubella]
Length = 475
Score = 72.4 bits (176), Expect = 6e-11
Identities = 27/54 (50%), Positives = 37/54 (68%)
Frame = +3
Query: 246 ECSICLCNADEDGKMVLLPLCRHAFHLHCLDAWLRFHHNCPMCRTSLFSLTESH 407
+C++CLC + + K+ LLP C HAFH+ C+D WL H CP+CR+SL S SH
Sbjct: 130 DCAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCRSSLLSDLSSH 183
>ref|XP_004300406.1| PREDICTED: RING-H2 finger protein ATL51-like [Fragaria vesca subsp.
vesca]
Length = 367
Score = 72.4 bits (176), Expect = 6e-11
Identities = 28/58 (48%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = +3
Query: 246 ECSICLCNADEDGKMVLLPLCRHAFHLHCLDAWLRFHHNCPMCRTSLFSL-TESHHSI 416
+C++CL +ED + LLP C HAFHL C+D WL+ H NCP+CR S+ S +HH +
Sbjct: 149 DCAVCLSEFEEDESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRASVVSTNAPTHHQV 206
>gb|AAL06848.1| AT4g30400/F17I23_260 [Arabidopsis thaliana]
gi|21655299|gb|AAM65361.1| AT4g30400/F17I23_260
[Arabidopsis thaliana]
Length = 472
Score = 72.4 bits (176), Expect = 6e-11
Identities = 27/54 (50%), Positives = 37/54 (68%)
Frame = +3
Query: 246 ECSICLCNADEDGKMVLLPLCRHAFHLHCLDAWLRFHHNCPMCRTSLFSLTESH 407
+C++CLC + + K+ LLP C HAFH+ C+D WL H CP+CR+SL S SH
Sbjct: 133 DCAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCRSSLLSDLSSH 186
>ref|XP_003612874.1| RING-H2 finger protein ATL3A [Medicago truncatula]
gi|355514209|gb|AES95832.1| RING-H2 finger protein ATL3A
[Medicago truncatula]
Length = 481
Score = 72.4 bits (176), Expect = 6e-11
Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Frame = +3
Query: 225 QNDGTSH--ECSICLCNADEDGKMVLLPLCRHAFHLHCLDAWLRFHHNCPMCRTSLFSLT 398
+NDG +CS+CL +D + LLP C HAFHL C+D WL+ H NCP+CR ++F+
Sbjct: 138 KNDGLVDVTDCSVCLNEFQDDESIRLLPKCSHAFHLPCIDTWLKSHSNCPLCRATIFAFN 197
Query: 399 ESHHS 413
S+ S
Sbjct: 198 SSNSS 202
>ref|XP_002869380.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297315216|gb|EFH45639.1| zinc finger family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 483
Score = 72.4 bits (176), Expect = 6e-11
Identities = 27/54 (50%), Positives = 37/54 (68%)
Frame = +3
Query: 246 ECSICLCNADEDGKMVLLPLCRHAFHLHCLDAWLRFHHNCPMCRTSLFSLTESH 407
+C++CLC + + K+ LLP C HAFH+ C+D WL H CP+CR+SL S SH
Sbjct: 138 DCAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCRSSLLSDLSSH 191
>ref|XP_002436619.1| hypothetical protein SORBIDRAFT_10g005930 [Sorghum bicolor]
gi|241914842|gb|EER87986.1| hypothetical protein
SORBIDRAFT_10g005930 [Sorghum bicolor]
Length = 446
Score = 72.4 bits (176), Expect = 6e-11
Identities = 27/55 (49%), Positives = 38/55 (69%)
Frame = +3
Query: 228 NDGTSHECSICLCNADEDGKMVLLPLCRHAFHLHCLDAWLRFHHNCPMCRTSLFS 392
+DG +C++CLC +D K+ LLP C HAFH+ C+DAWL H CP+CR S+ +
Sbjct: 122 DDGEPFDCAVCLCEFADDDKLRLLPTCGHAFHVPCIDAWLLSHSTCPLCRGSILA 176