BLASTX nr result
ID: Ephedra28_contig00021784
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00021784
(1565 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006853895.1| hypothetical protein AMTR_s00036p00162680 [A... 303 2e-79
emb|CCO15470.1| ATP-dependent DNA helicase PcrA [Bathycoccus pra... 230 1e-57
ref|XP_003079372.1| ATP-dependent DNA helicase (ISS) [Ostreococc... 222 4e-55
ref|XP_001418014.1| predicted protein [Ostreococcus lucimarinus ... 186 2e-44
ref|WP_017825718.1| ATP-dependent DNA helicase PcrA [Clostridium... 183 2e-43
ref|WP_003370906.1| ATP-dependent DNA helicase PcrA [Clostridium... 183 2e-43
ref|YP_001919827.1| ATP-dependent DNA helicase PcrA [Clostridium... 183 2e-43
ref|WP_021684115.1| ATP-dependent DNA helicase PcrA [Selenomonas... 181 6e-43
ref|YP_005433329.1| DNA helicase II [Selenomonas ruminantium sub... 181 6e-43
ref|YP_001884643.1| UvrD/Rep family helicase [Clostridium botuli... 181 6e-43
ref|WP_017352372.1| ATP-dependent DNA helicase PcrA [Clostridium... 181 8e-43
ref|WP_009657513.1| ATP-dependent DNA helicase PcrA [Selenomonas... 181 8e-43
ref|WP_009348965.1| ATP-dependent DNA helicase PcrA [Selenomonas... 181 8e-43
ref|WP_009438961.1| ATP-dependent DNA helicase PcrA [Selenomonas... 181 8e-43
ref|WP_019542011.1| ATP-dependent DNA helicase PcrA [Selenomonas... 179 4e-42
ref|YP_006892317.1| ATP-dependent DNA helicase PcrA [Geobacter s... 178 6e-42
ref|WP_009728005.1| ATP-dependent DNA helicase PcrA [Selenomonas... 177 8e-42
ref|NP_954451.1| ATP-dependent DNA helicase PcrA [Geobacter sulf... 177 8e-42
ref|WP_008427205.1| ATP-dependent DNA helicase PcrA [Clostridium... 177 8e-42
ref|YP_003826115.1| ATP-dependent DNA helicase PcrA [Thermosedim... 176 2e-41
>ref|XP_006853895.1| hypothetical protein AMTR_s00036p00162680 [Amborella trichopoda]
gi|548857563|gb|ERN15362.1| hypothetical protein
AMTR_s00036p00162680 [Amborella trichopoda]
Length = 679
Score = 303 bits (775), Expect = 2e-79
Identities = 192/519 (36%), Positives = 281/519 (54%), Gaps = 6/519 (1%)
Frame = -2
Query: 1558 LRVPPSEITCITYTKKAANELKERLDNLLGHEVSRQLKVGTVHSICASIIRKSRQISDYH 1379
L V PS I C+ +T KAA E+ ERL+ L ++ L VGTVHS+C+ I+R S +
Sbjct: 122 LNVDPSSILCLAFTDKAAKEIYERLNCPLEADLMDPLMVGTVHSVCSRILRDSMHTLNIG 181
Query: 1378 LSVDYSICDEDDSRRILRNILQEACHGFDGIKAS-RQAMQTTVMECQSECKVQTSMSFVQ 1202
L DYSICD+ S ++ IL+EA S ++ + ++ + F
Sbjct: 182 LDSDYSICDDTQSLNVVNRILKEAFKSCAEETCSVKKVDEGEYQNVATQLEHLDESQFAL 241
Query: 1201 TYHSRRTKILMSIVPEISQFLECYNDKKNDTKKKGVTISADAVEELYSFICRARLNKMCL 1022
K L+ P+ S L+ Y + G +S + L I AR ++
Sbjct: 242 HEDLLACKFLVDGTPDRSWLLQ-YRPNTD-----GKFLSTVPSKLLLQEINNARSCRIKN 295
Query: 1021 FIAEKGQRNIPAKTLP---AEFIYKVADIYELDLRRANAXXXXXXXXXXXXXXXXYPEIL 851
FIA+ + LP ++F +K++ +YE +LRR+ A P +L
Sbjct: 296 FIAKSRGSFLHGFGLPPPCSDFSHKISKVYERELRRSGAVDFNDLLYLTCQMFHMRPHLL 355
Query: 850 KDCRNKWKYLLVDEFQDIDDVQYEIIRLLSAGNESLFVVGDSNQAIYEWRGAQSAHMQYS 671
+ R +W ++LVDEFQDIDDVQYEIIRLL++GN SLFVVGDS+QAIYEWRGA +MQY+
Sbjct: 356 QKYRQQWSHVLVDEFQDIDDVQYEIIRLLASGNGSLFVVGDSDQAIYEWRGANPRYMQYA 415
Query: 670 LVQDFPPITTFQLKTNYRSTSNILKVASAILN--NSGEAGINSSVKAFQAVKPSGETVYI 497
L +DFP + + QL NYRS+ NIL +AS +L + + +N + A K GE + I
Sbjct: 416 LEKDFPEVISLQLLRNYRSSRNILNLASVLLKFIHGRKEILNHEIHHLLATKDQGEPICI 475
Query: 496 RKLCNAAEEANYIALEIQGLASLYNVNWDNIAILYRTHFQSYFIEASLSRLGIPHITVGS 317
++ EEAN++A EI+ D+ A+LYRTH QS E SL ++GIP V
Sbjct: 476 KEFLIPQEEANFVASEIKSRWVDQRNFSDSFAVLYRTHQQSSLFEISLRQMGIPCTVVDG 535
Query: 316 KPFCSNKEIKIVISYLHLIGNLENQVALENIINIPNRGIGEKTISLLKEWSSSRNILLSN 137
F + EIK V++YLHL + N ++E ++ P RGIG KTIS L++W +N+ L
Sbjct: 536 SSFFHHVEIKCVLAYLHLTCDFRNPDSMEYVLQRPRRGIGPKTISCLRDWILQQNLTLEE 595
Query: 136 VLQDIYAGNATAKELRITKRASDSLKLFWKLIEELNMLS 20
LQ++ + T E +I+K A L F++LI+ L +S
Sbjct: 596 ALQELCDKSDTFNEFKISKTARVHLIHFFQLIKGLQQMS 634
>emb|CCO15470.1| ATP-dependent DNA helicase PcrA [Bathycoccus prasinos]
Length = 862
Score = 230 bits (587), Expect = 1e-57
Identities = 167/548 (30%), Positives = 268/548 (48%), Gaps = 41/548 (7%)
Frame = -2
Query: 1552 VPPSEITCITYTKKAANELKERLDNLLGHEVSRQLKVGTVHSICASIIRKSRQISDYHL- 1376
V P I CIT+T KAA EL+ RL+ +G +VSR + GT H++ A I+RK + L
Sbjct: 71 VSPENILCITFTNKAAKELRNRLERTMGADVSRAITAGTFHAVAARILRKHVEKVHEALE 130
Query: 1375 -SVDYSICDEDDSRRILRNILQEACHGFDGIKASRQAMQTTVMECQSECKVQTSMSFVQT 1199
+ D++I D DDS+ ++R+IL E G A+ M+ + +S K +++
Sbjct: 131 RTADFTIYDSDDSKAVVRDILVEKL-GQTKKSAAPLPMKNFISSAKSSMKTSVNVN---- 185
Query: 1198 YHSRRTKILMSIVPEISQFLECYNDKKNDTKKKGVTISADAVEELYSFICRARLNKMCLF 1019
RT + D K +G + ++D ++ R K
Sbjct: 186 ---ARTAM----------------DSALRMKARGGSSNSDVDDD-------DRRRKSSSS 219
Query: 1018 IAEKGQRNIPAKTLPAEFIYKVADI----YELDLRRANAXXXXXXXXXXXXXXXXYPEIL 851
+ ++ + + + + DI YE LR AN+ +
Sbjct: 220 SSSSSSSSLSSSSAGIALLREQFDIVWSEYEQKLREANSFDFDDLLSAVVYLFENRRDAK 279
Query: 850 KDCRNKWKYLLVDEFQDIDDVQYEIIRLLSAGNESLFVVGDSNQAIYEWRGAQSAHMQYS 671
+ +N+W ++LVDEFQD QYE+IR L E+LFVVGD++QAIY WRGA+ A+++
Sbjct: 280 RYLQNRWSHVLVDEFQDTSLAQYEMIRHLGEKAETLFVVGDADQAIYGWRGAEVANIRSR 339
Query: 670 LVQDFPPITTFQLKTNYRSTSNILKVASAILNNSGEAGINSSVKAFQAVKPSGETVYIRK 491
DF TF+L TNYRST+ I+ A A++ S I S++ ++ A+K G+ V + +
Sbjct: 340 FDDDFRNAQTFRLTTNYRSTATIVSAARAVIQQS---EIPSALMSWDAIKEGGQDVAVVE 396
Query: 490 LCNAAEEANYIALEIQGLA----------------------SLYNVNWDNIAILYRTHFQ 377
+ EE +IA +++ + SL + +IA+LYRT+ Q
Sbjct: 397 AGDEREEGAFIATQVKQMLKDAEKKTNSSSTGGSSNGNRDDSLEGLRKKDIAVLYRTNTQ 456
Query: 376 SYFIEASLSRLGIPHITVGSKPFCSNKEIKIVISYLHLIGNLENQVALENIINIPNRGIG 197
+ +E + R G+PH+ VG + F KEIK +I+YL + N + V+L +IN P RGIG
Sbjct: 457 ARALEEAFVRAGVPHVVVGDQSFYGRKEIKDLIAYLRVASNSSDGVSLRRVINTPTRGIG 516
Query: 196 EKTISLLKEWSS--SRNILLSNVLQDIYAGNA-----------TAKELRITKRASDSLKL 56
EKT+ L+EW S L + + +A N+ +AK++ IT RA +S+
Sbjct: 517 EKTVEKLEEWVSRCEAPSLGAALFDRAWAKNSDSDDPDHEILPSAKDMGITARARNSVLA 576
Query: 55 FWKLIEEL 32
F K + E+
Sbjct: 577 FAKTLIEI 584
>ref|XP_003079372.1| ATP-dependent DNA helicase (ISS) [Ostreococcus tauri]
gi|116057827|emb|CAL54030.1| ATP-dependent DNA helicase
(ISS) [Ostreococcus tauri]
Length = 859
Score = 222 bits (565), Expect = 4e-55
Identities = 165/535 (30%), Positives = 246/535 (45%), Gaps = 17/535 (3%)
Frame = -2
Query: 1555 RVPPSEITCITYTKKAANELKERLDNLLGHEVSRQLKVGTVHSICASIIRK-SRQISDYH 1379
+ PP EI CIT+T KAA EL+ERL + +G ++++ GT HS+ A ++R+ +I
Sbjct: 114 KTPPREILCITFTNKAAKELRERLRDKIGEVAAKEITAGTFHSVAARMLRRHGERIPGIG 173
Query: 1378 LSVDYSICDEDDSRRILRNILQEACHGFDGIKASRQAMQTTVMECQSECKVQTSMSFVQT 1199
+ +++I D DDS +Q +Q+ ++ E K ++
Sbjct: 174 RTGEFTIYDADDS---------------------KQIVQSVLVNKFGESKKTAQPGPMRN 212
Query: 1198 YHSR-RTKILMSIVPEISQFLECYNDKKNDTKKKGVTISADAVEELYSFICRARLNKMCL 1022
+ S ++ + S+ SQ L D KK +S ELY
Sbjct: 213 WISTAKSCVKHSVGLRGSQMLRALED----AKKPIPPMSQQRFVELY------------- 255
Query: 1021 FIAEKGQRNIPAKTLPAEFIYKVADIYELDLRRANAXXXXXXXXXXXXXXXXYPEILKDC 842
D YE LR+ANA P++
Sbjct: 256 ------------------------DEYEDGLRQANAFDFDDLLSATVAMLEMCPDVRAYY 291
Query: 841 RNKWKYLLVDEFQDIDDVQYEIIRLLSAGNESLFVVGDSNQAIYEWRGAQSAHMQYSLVQ 662
+W +LVDEFQD QYE+IR LS S+FVVGD++QAIY WRGA+ A+++ Q
Sbjct: 292 ERRWSQVLVDEFQDTSTTQYELIRKLSQPQGSVFVVGDADQAIYGWRGAEVANIRTQFDQ 351
Query: 661 DFPPITTFQLKTNYRSTSNILKVASAILNNSGEAGINSSVKAFQAVKPSGETVYIRKLCN 482
DF + T L TNYRSTS I++ A A++ S S A P G V I + +
Sbjct: 352 DFKEVQTHMLTTNYRSTSTIVEAAQAVIKESS----FPSPLDLVAHTPGGRDVAIVEAND 407
Query: 481 AAEEANYIALEIQGLASLYNVNWDNIAILYRTHFQSYFIEASLSRLGIPHITVGSKPFCS 302
EEA +IALE + L ++ + ++A+LYRT+ Q+ +E + R G+PH VG F S
Sbjct: 408 DREEAEFIALEARKLVQDSDLRYSDVAVLYRTNSQARVLEEAFIRAGVPHTVVGDTSFYS 467
Query: 301 NKEIKIVISYLHLIGNLENQVALENIINIPNRGIGEKTISLLKEWSSS--RNILLSNVLQ 128
KEIK +I+YL ++ N + V+L IIN P RGIG TI L W + + LS +
Sbjct: 468 RKEIKDMIAYLRIVSNSSDTVSLNRIINTPTRGIGNSTIEKLNAWLKTLPKKDGLSPSIG 527
Query: 127 DIYAGNA-------------TAKELRITKRASDSLKLFWKLIEELNMLSRNKTVG 2
D A +A E+ +T RA ++ F +L+ + N T G
Sbjct: 528 DALLRGAWKTNPGEQSELLPSADEMGLTARARTAVLNFVELMRACQQTAMNATPG 582
>ref|XP_001418014.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578242|gb|ABO96307.1| predicted protein
[Ostreococcus lucimarinus CCE9901]
Length = 657
Score = 186 bits (472), Expect = 2e-44
Identities = 116/334 (34%), Positives = 174/334 (52%), Gaps = 1/334 (0%)
Frame = -2
Query: 1000 RNIPAKTLPAEFIYKVADIYELDLRRANAXXXXXXXXXXXXXXXXYPEILKDCRNKWKYL 821
++ P + E + D YEL LR+ANA P++ ++W +
Sbjct: 146 KSCPIPPMSHERFVECYDEYELGLRQANAFDFDDLLSATVAMLEMCPDVRSYYEHRWSQV 205
Query: 820 LVDEFQDIDDVQYEIIRLLSAGNESLFVVGDSNQAIYEWRGAQSAHMQYSLVQDFPPITT 641
LVDEFQD QYE+IR LS S+FVVGD++QAIY WRGA+ A+++ +DF + T
Sbjct: 206 LVDEFQDTSTTQYELIRKLSQPQGSVFVVGDADQAIYGWRGAEVANIRTQFDEDFKDVQT 265
Query: 640 FQLKTNYRSTSNILKVASAILNNSGEAGINSSVKAFQAVKPSGETVYIRKLCNAAEEANY 461
L TNYRST+ I++ A A++ S S A P G V I + + EEA +
Sbjct: 266 HMLTTNYRSTATIVEAAQAVIKESA----FPSPLDLVANTPGGRDVAIVEANDDREEAEF 321
Query: 460 IALEI-QGLASLYNVNWDNIAILYRTHFQSYFIEASLSRLGIPHITVGSKPFCSNKEIKI 284
IALE + + ++ + IA+LYRT+ Q+ +E + R G+PH +G F KEIK
Sbjct: 322 IALEARKSVKEDPDLRYSEIAVLYRTNSQARVLEEAFIRAGVPHKVIGDTSFYGRKEIKD 381
Query: 283 VISYLHLIGNLENQVALENIINIPNRGIGEKTISLLKEWSSSRNILLSNVLQDIYAGNAT 104
+I+YL ++ N + V+L IIN P RGIG TI L W + L +
Sbjct: 382 MIAYLRVVSNSADTVSLNRIINTPTRGIGNSTIEKLSAWIDTLPKTDGTELL------PS 435
Query: 103 AKELRITKRASDSLKLFWKLIEELNMLSRNKTVG 2
A+E+ +T RA ++ F +L+ E +++ T G
Sbjct: 436 AEEMGLTTRARSAVLKFSQLMAETREKAKSSTPG 469
Score = 69.3 bits (168), Expect = 4e-09
Identities = 33/82 (40%), Positives = 55/82 (67%), Gaps = 1/82 (1%)
Frame = -2
Query: 1558 LRVPPSEITCITYTKKAANELKERLDNLLGHEVSRQLKVGTVHSICASIIRK-SRQISDY 1382
L+ PP EI CIT+T KAA EL+ERL + +G +R++ GT HS+ A ++R+ +I
Sbjct: 41 LKTPPREILCITFTNKAARELRERLRDKIGDAAAREITAGTFHSVAARMLRRHGDRIPGI 100
Query: 1381 HLSVDYSICDEDDSRRILRNIL 1316
+ +++I D DDS++I++ +L
Sbjct: 101 GRTGEFTIYDADDSKQIVQGVL 122
>ref|WP_017825718.1| ATP-dependent DNA helicase PcrA [Clostridium botulinum]
Length = 749
Score = 183 bits (464), Expect = 2e-43
Identities = 106/321 (33%), Positives = 182/321 (56%), Gaps = 3/321 (0%)
Frame = -2
Query: 958 KVADIYELDLRRA---NAXXXXXXXXXXXXXXXXYPEILKDCRNKWKYLLVDEFQDIDDV 788
K+A+ YE+ RR NA PE+L +NK+KY++VDE+QD +
Sbjct: 168 KIAEAYEMYQRRLKENNALDFDDLIFKAVELFKSNPEVLDFYQNKFKYIMVDEYQDTNGA 227
Query: 787 QYEIIRLLSAGNESLFVVGDSNQAIYEWRGAQSAHMQYSLVQDFPPITTFQLKTNYRSTS 608
QYE+I+LL++ +++ VVGD +Q IY+WRGA ++ +D+P +L+ NYRS S
Sbjct: 228 QYELIKLLASKYKNICVVGDDDQCIYQWRGADIQNI-LDFEKDYPNAKVIKLEQNYRSKS 286
Query: 607 NILKVASAILNNSGEAGINSSVKAFQAVKPSGETVYIRKLCNAAEEANYIALEIQGLASL 428
NIL A+ ++ N+ N K + + +G+ + I + + ++E ++++ +I + S
Sbjct: 287 NILNAANVVIVNNA----NRKSKVLRTEQEAGDKIKIYRAFSDSDEGDFVSKQIAEIKSK 342
Query: 427 YNVNWDNIAILYRTHFQSYFIEASLSRLGIPHITVGSKPFCSNKEIKIVISYLHLIGNLE 248
N + + AILYRT+ QS E SL R GIP+ VG F KEIK +++YL I N
Sbjct: 343 ENKEYKDFAILYRTNAQSRIFEESLRRRGIPYKIVGGTRFYDRKEIKDILAYLKAIVNPR 402
Query: 247 NQVALENIINIPNRGIGEKTISLLKEWSSSRNILLSNVLQDIYAGNATAKELRITKRASD 68
+ V+L+ IIN+P R IG+ T+S ++E+++S + + + L ++ +T R ++
Sbjct: 403 DDVSLKRIINVPKRSIGDATVSKIQEFANSFELDMWDALMEVRTIPT------LTPRNAN 456
Query: 67 SLKLFWKLIEELNMLSRNKTV 5
++++F L+EE LS +
Sbjct: 457 NIEVFTNLMEEFMSLSETAPI 477
>ref|WP_003370906.1| ATP-dependent DNA helicase PcrA [Clostridium botulinum]
gi|243082963|gb|EES48853.1| ATP-dependent DNA helicase
PcrA [Clostridium botulinum E1 str. 'BoNT E Beluga']
Length = 749
Score = 183 bits (464), Expect = 2e-43
Identities = 106/321 (33%), Positives = 182/321 (56%), Gaps = 3/321 (0%)
Frame = -2
Query: 958 KVADIYELDLRRA---NAXXXXXXXXXXXXXXXXYPEILKDCRNKWKYLLVDEFQDIDDV 788
K+A+ YE+ RR NA PE+L +NK+KY++VDE+QD +
Sbjct: 168 KIAEAYEMYQRRLKENNALDFDDLIFKAVELFKSNPEVLDFYQNKFKYIMVDEYQDTNGA 227
Query: 787 QYEIIRLLSAGNESLFVVGDSNQAIYEWRGAQSAHMQYSLVQDFPPITTFQLKTNYRSTS 608
QYE+I+LL++ +++ VVGD +Q IY+WRGA ++ +D+P +L+ NYRS S
Sbjct: 228 QYELIKLLASKYKNICVVGDDDQCIYQWRGADIQNI-LDFEKDYPNAKVIKLEQNYRSKS 286
Query: 607 NILKVASAILNNSGEAGINSSVKAFQAVKPSGETVYIRKLCNAAEEANYIALEIQGLASL 428
NIL A+ ++ N+ N K + + +G+ + I + + ++E ++++ +I + S
Sbjct: 287 NILNAANVVIINNA----NRKSKVLRTEQEAGDKIKIYRAFSDSDEGDFVSKQIAEIKSK 342
Query: 427 YNVNWDNIAILYRTHFQSYFIEASLSRLGIPHITVGSKPFCSNKEIKIVISYLHLIGNLE 248
N + + AILYRT+ QS E SL R GIP+ VG F KEIK +++YL I N
Sbjct: 343 ENKEYKDFAILYRTNAQSRIFEESLRRRGIPYKIVGGTRFYDRKEIKDILAYLKAIVNPR 402
Query: 247 NQVALENIINIPNRGIGEKTISLLKEWSSSRNILLSNVLQDIYAGNATAKELRITKRASD 68
+ V+L+ IIN+P R IG+ T+S ++E+++S + + + L ++ +T R ++
Sbjct: 403 DDVSLKRIINVPKRSIGDATVSKIQEFANSFELDMWDALMEVRTIPT------LTPRNAN 456
Query: 67 SLKLFWKLIEELNMLSRNKTV 5
++++F L+EE LS +
Sbjct: 457 NIEVFTNLMEEFMSLSETAPI 477
>ref|YP_001919827.1| ATP-dependent DNA helicase PcrA [Clostridium botulinum E3 str. Alaska
E43] gi|501425639|ref|WP_012450309.1| ATP-dependent DNA
helicase PcrA [Clostridium botulinum]
gi|188498955|gb|ACD52091.1| ATP-dependent DNA helicase
PcrA [Clostridium botulinum E3 str. Alaska E43]
Length = 749
Score = 183 bits (464), Expect = 2e-43
Identities = 106/321 (33%), Positives = 182/321 (56%), Gaps = 3/321 (0%)
Frame = -2
Query: 958 KVADIYELDLRRA---NAXXXXXXXXXXXXXXXXYPEILKDCRNKWKYLLVDEFQDIDDV 788
K+A+ YE+ RR NA PE+L +NK+KY++VDE+QD +
Sbjct: 168 KIAEAYEMYQRRLKENNALDFDDLIFKAVELFKSNPEVLDFYQNKFKYIMVDEYQDTNGA 227
Query: 787 QYEIIRLLSAGNESLFVVGDSNQAIYEWRGAQSAHMQYSLVQDFPPITTFQLKTNYRSTS 608
QYE+I+LL++ +++ VVGD +Q IY+WRGA ++ +D+P +L+ NYRS S
Sbjct: 228 QYELIKLLASKYKNICVVGDDDQCIYQWRGADIQNI-LDFEKDYPNAKVIKLEQNYRSKS 286
Query: 607 NILKVASAILNNSGEAGINSSVKAFQAVKPSGETVYIRKLCNAAEEANYIALEIQGLASL 428
NIL A+ ++ N+ N K + + +G+ + I + + ++E ++++ +I + S
Sbjct: 287 NILNAANVVIVNNA----NRKSKVLRTEQEAGDKIKIYRAFSDSDEGDFVSKQIAEIKSK 342
Query: 427 YNVNWDNIAILYRTHFQSYFIEASLSRLGIPHITVGSKPFCSNKEIKIVISYLHLIGNLE 248
N + + AILYRT+ QS E SL R GIP+ VG F KEIK +++YL I N
Sbjct: 343 ENKEYKDFAILYRTNAQSRIFEESLRRRGIPYKIVGGTRFYDRKEIKDILAYLKAIVNPR 402
Query: 247 NQVALENIINIPNRGIGEKTISLLKEWSSSRNILLSNVLQDIYAGNATAKELRITKRASD 68
+ V+L+ IIN+P R IG+ T+S ++E+++S + + + L ++ +T R ++
Sbjct: 403 DDVSLKRIINVPKRSIGDATVSKIQEFANSFELDMWDALMEVRTIPT------LTPRNAN 456
Query: 67 SLKLFWKLIEELNMLSRNKTV 5
++++F L+EE LS +
Sbjct: 457 NIEVFTNLMEEFMSLSETAPI 477
>ref|WP_021684115.1| ATP-dependent DNA helicase PcrA [Selenomonas sp. oral taxon 892]
gi|543989752|gb|ERJ92862.1| ATP-dependent DNA helicase
PcrA [Selenomonas sp. oral taxon 892 str. F0426]
Length = 747
Score = 181 bits (460), Expect = 6e-43
Identities = 101/283 (35%), Positives = 164/283 (57%)
Frame = -2
Query: 973 AEFIYKVADIYELDLRRANAXXXXXXXXXXXXXXXXYPEILKDCRNKWKYLLVDEFQDID 794
AE + KV D+Y+ LR NA EI +NK++Y+LVDE+QD +
Sbjct: 165 AEQVAKVYDLYQSKLRANNALDFDDLLMLTVELLSNNEEIRAKYQNKFQYILVDEYQDTN 224
Query: 793 DVQYEIIRLLSAGNESLFVVGDSNQAIYEWRGAQSAHMQYSLVQDFPPITTFQLKTNYRS 614
QY I +LL+AG+ ++ VVGD++Q+IY WRGA ++ + +D+P T L+ NYRS
Sbjct: 225 GAQYAITKLLAAGHHNICVVGDADQSIYGWRGADMRNI-LNFERDYPEATVILLEQNYRS 283
Query: 613 TSNILKVASAILNNSGEAGINSSVKAFQAVKPSGETVYIRKLCNAAEEANYIALEIQGLA 434
T NIL A+A++ N+ + K P+G+ + I + EA+YI E++ L
Sbjct: 284 TKNILAAANAVIENN----LTRKKKELWTDNPTGDPITIYEGATEKNEASYIVREVERLH 339
Query: 433 SLYNVNWDNIAILYRTHFQSYFIEASLSRLGIPHITVGSKPFCSNKEIKIVISYLHLIGN 254
++++V + +IA+LYRT+ QS IE + GIP+ VGS F +EI+ +I+YL +I N
Sbjct: 340 TMFHVKYGDIAVLYRTNAQSRNIEEAFYATGIPYAMVGSVRFYDRREIRDIIAYLRVIYN 399
Query: 253 LENQVALENIINIPNRGIGEKTISLLKEWSSSRNILLSNVLQD 125
+ ++L IIN+P RG+G+ ++ + E ++ I L ++ D
Sbjct: 400 PRDTLSLLRIINVPKRGLGQTSLGRMMETAAEYRISLFELITD 442
>ref|YP_005433329.1| DNA helicase II [Selenomonas ruminantium subsp. lactilytica TAM6421]
gi|504237639|ref|WP_014424741.1| ATP-dependent DNA
helicase PcrA [Selenomonas ruminantium]
gi|381366478|dbj|BAL83306.1| DNA helicase II [Selenomonas
ruminantium subsp. lactilytica TAM6421]
Length = 765
Score = 181 bits (460), Expect = 6e-43
Identities = 113/308 (36%), Positives = 172/308 (55%), Gaps = 3/308 (0%)
Frame = -2
Query: 967 FIYKVADIYEL---DLRRANAXXXXXXXXXXXXXXXXYPEILKDCRNKWKYLLVDEFQDI 797
F KVA++Y L LR NA + EI +N++KY+LVDE+QD
Sbjct: 164 FQKKVAEVYALYAKKLRANNAMDFDDLLMVSVLLLEEHEEIRVKYQNRFKYILVDEYQDT 223
Query: 796 DDVQYEIIRLLSAGNESLFVVGDSNQAIYEWRGAQSAHMQYSLVQDFPPITTFQLKTNYR 617
+ QY++ ++L+A + +L VVGD++Q+IY WRGA ++ QD+P T +L+ NYR
Sbjct: 224 NGAQYQLTKILAAKHHNLCVVGDADQSIYGWRGADIRNIM-DFEQDYPEARTIKLEQNYR 282
Query: 616 STSNILKVASAILNNSGEAGINSSVKAFQAVKPSGETVYIRKLCNAAEEANYIALEIQGL 437
ST NIL A+A++ E IN K +GE + I + + +EA +IA +
Sbjct: 283 STKNILAAANAVI----EHNINRKKKDLWTENATGEKLTIYEARDERDEAQFIATTVNKQ 338
Query: 436 ASLYNVNWDNIAILYRTHFQSYFIEASLSRLGIPHITVGSKPFCSNKEIKIVISYLHLIG 257
+L+N ++ ++AILYRT+ QS IE R GIP+ VG F KEIK +++YL +I
Sbjct: 339 KTLFNTSYGDMAILYRTNAQSRVIEEMFMRNGIPYTMVGGLKFYDRKEIKDILAYLRVIY 398
Query: 256 NLENQVALENIINIPNRGIGEKTISLLKEWSSSRNILLSNVLQDIYAGNATAKELRITKR 77
N + V+L IIN+P RGIG TI+ L E++ + L +V+ ++ A +T R
Sbjct: 399 NPLDTVSLLRIINVPKRGIGASTIAKLTEYADFNGLTLFDVMSNLDAVEG------LTTR 452
Query: 76 ASDSLKLF 53
A L+LF
Sbjct: 453 AKRPLELF 460
>ref|YP_001884643.1| UvrD/Rep family helicase [Clostridium botulinum B str. Eklund 17B]
gi|501394175|ref|WP_012425741.1| ATP-dependent DNA
helicase PcrA [Clostridium botulinum]
gi|187723798|gb|ACD25019.1| helicase, UvrD/Rep family
[Clostridium botulinum B str. Eklund 17B]
gi|545680015|emb|CDH89367.1| ATP-dependent DNA helicase
[Clostridium botulinum B str. Eklund 17B(NRP)]
Length = 750
Score = 181 bits (460), Expect = 6e-43
Identities = 105/321 (32%), Positives = 181/321 (56%), Gaps = 3/321 (0%)
Frame = -2
Query: 958 KVADIYELDLRRA---NAXXXXXXXXXXXXXXXXYPEILKDCRNKWKYLLVDEFQDIDDV 788
K+A+ YE+ RR NA PE+L +NK+KY++VDE+QD +
Sbjct: 168 KIAEAYEMYQRRLKENNALDFDDLIFKAVELFKSNPEVLDFYQNKFKYIMVDEYQDTNGA 227
Query: 787 QYEIIRLLSAGNESLFVVGDSNQAIYEWRGAQSAHMQYSLVQDFPPITTFQLKTNYRSTS 608
QYE+I+LL++ +++ VVGD +Q IY+WRGA ++ +D+P +L+ NYRS S
Sbjct: 228 QYELIKLLASKYKNICVVGDDDQCIYQWRGADIQNI-LDFEKDYPKAKVIKLEQNYRSKS 286
Query: 607 NILKVASAILNNSGEAGINSSVKAFQAVKPSGETVYIRKLCNAAEEANYIALEIQGLASL 428
NIL A+ ++ N+ N K + + +G+ + I + + ++E ++++ +I + S
Sbjct: 287 NILNAANVVIVNNA----NRKSKVLRTEQEAGDKIKIYRAFSDSDEGDFVSKQIAEIKSK 342
Query: 427 YNVNWDNIAILYRTHFQSYFIEASLSRLGIPHITVGSKPFCSNKEIKIVISYLHLIGNLE 248
N + + AILYRT+ QS E SL R GIP+ +G F KEIK V++YL I N
Sbjct: 343 ENKEYKDFAILYRTNAQSRIFEESLRRRGIPYKIIGGTRFYDRKEIKDVLAYLKAIVNPR 402
Query: 247 NQVALENIINIPNRGIGEKTISLLKEWSSSRNILLSNVLQDIYAGNATAKELRITKRASD 68
+ V+L+ IIN+P R IG+ T+S ++E++++ + + + L ++ +T R ++
Sbjct: 403 DDVSLKRIINVPKRSIGDATVSKIQEFANNFELDMWDALMEVRTIPT------LTPRNAN 456
Query: 67 SLKLFWKLIEELNMLSRNKTV 5
+++ F L+EE LS +
Sbjct: 457 NIEAFTNLMEEFMSLSETAPI 477
>ref|WP_017352372.1| ATP-dependent DNA helicase PcrA [Clostridium botulinum]
Length = 750
Score = 181 bits (459), Expect = 8e-43
Identities = 104/321 (32%), Positives = 181/321 (56%), Gaps = 3/321 (0%)
Frame = -2
Query: 958 KVADIYELDLRRA---NAXXXXXXXXXXXXXXXXYPEILKDCRNKWKYLLVDEFQDIDDV 788
K+A+ YE+ RR NA PE+L +NK+KY++VDE+QD +
Sbjct: 168 KIAEAYEMYQRRLKENNALDFDDLIFKAVELFKSNPEVLDFYQNKFKYIMVDEYQDTNGA 227
Query: 787 QYEIIRLLSAGNESLFVVGDSNQAIYEWRGAQSAHMQYSLVQDFPPITTFQLKTNYRSTS 608
QYE+I+LL++ +++ VVGD +Q IY+WRGA ++ +D+P +L+ NYRS S
Sbjct: 228 QYELIKLLASKYKNICVVGDDDQCIYQWRGADIQNI-LDFEKDYPKAKVIKLEQNYRSKS 286
Query: 607 NILKVASAILNNSGEAGINSSVKAFQAVKPSGETVYIRKLCNAAEEANYIALEIQGLASL 428
NIL A+ ++ N+ N K + + +G+ + I + + ++E ++++ +I + S
Sbjct: 287 NILNAANVVIVNNA----NRKSKVLRTEQEAGDKIKIYRAFSDSDEGDFVSKQIAEIKSK 342
Query: 427 YNVNWDNIAILYRTHFQSYFIEASLSRLGIPHITVGSKPFCSNKEIKIVISYLHLIGNLE 248
N + + AILYRT+ QS E SL R GIP+ +G F KEIK +++YL I N
Sbjct: 343 ENKEYKDFAILYRTNAQSRIFEESLRRRGIPYKIIGGTRFYDRKEIKDILAYLKAIVNPR 402
Query: 247 NQVALENIINIPNRGIGEKTISLLKEWSSSRNILLSNVLQDIYAGNATAKELRITKRASD 68
+ V+L+ IIN+P R IG+ T+S ++E++++ + + + L ++ +T R ++
Sbjct: 403 DDVSLKRIINVPKRSIGDATVSKIQEFANNFELDMWDALMEVRTIPT------LTPRNAN 456
Query: 67 SLKLFWKLIEELNMLSRNKTV 5
+++ F L+EE LS +
Sbjct: 457 NIEAFTNLMEEFMSLSETAPI 477
>ref|WP_009657513.1| ATP-dependent DNA helicase PcrA [Selenomonas sp. FOBRC9]
gi|400380846|gb|EJP33655.1| ATP-dependent DNA helicase
PcrA [Selenomonas sp. FOBRC9]
Length = 747
Score = 181 bits (459), Expect = 8e-43
Identities = 97/283 (34%), Positives = 165/283 (58%)
Frame = -2
Query: 973 AEFIYKVADIYELDLRRANAXXXXXXXXXXXXXXXXYPEILKDCRNKWKYLLVDEFQDID 794
AE + KV ++Y+ LR NA E+ + + K++Y+LVDE+QD +
Sbjct: 165 AEQVAKVYELYQSKLRANNALDFDDLLMLTVAVLSQNEEVRRKYQEKFRYILVDEYQDTN 224
Query: 793 DVQYEIIRLLSAGNESLFVVGDSNQAIYEWRGAQSAHMQYSLVQDFPPITTFQLKTNYRS 614
QY I +LL+ G+ ++ VVGD++Q+IY WRGA ++ + +D+P T L+ NYRS
Sbjct: 225 GAQYNITKLLAGGHRNICVVGDADQSIYGWRGADMRNI-LNFERDYPEATVILLEQNYRS 283
Query: 613 TSNILKVASAILNNSGEAGINSSVKAFQAVKPSGETVYIRKLCNAAEEANYIALEIQGLA 434
T NIL+ A+A++ N+ ++ KA G+ + + + EA+YI E++ L
Sbjct: 284 TKNILEAANAVIENN----LDRKKKALWTDNVQGDPIVVYEGATEKNEASYIVREVERLH 339
Query: 433 SLYNVNWDNIAILYRTHFQSYFIEASLSRLGIPHITVGSKPFCSNKEIKIVISYLHLIGN 254
+++NV + +IA+LYRT+ QS IE + G+P+ VG+ F +EIK +I+YL +I N
Sbjct: 340 TMFNVKYGDIAVLYRTNAQSRNIEEAFYASGVPYSMVGAVRFYDRREIKDIIAYLRVIYN 399
Query: 253 LENQVALENIINIPNRGIGEKTISLLKEWSSSRNILLSNVLQD 125
+ ++L IIN+P RG+G+ T++ + E ++ I L ++ D
Sbjct: 400 PRDTLSLLRIINVPRRGLGQTTLARMAELAAEHRISLFEIITD 442
>ref|WP_009348965.1| ATP-dependent DNA helicase PcrA [Selenomonas artemidis]
gi|320138788|gb|EFW30678.1| ATP-dependent DNA helicase
PcrA [Selenomonas artemidis F0399]
Length = 747
Score = 181 bits (459), Expect = 8e-43
Identities = 97/283 (34%), Positives = 165/283 (58%)
Frame = -2
Query: 973 AEFIYKVADIYELDLRRANAXXXXXXXXXXXXXXXXYPEILKDCRNKWKYLLVDEFQDID 794
AE + KV ++Y+ LR NA E+ + + K++Y+LVDE+QD +
Sbjct: 165 AEQVAKVYELYQSKLRANNALDFDDLLMLTVAVLSQNEEVRRKYQEKFRYILVDEYQDTN 224
Query: 793 DVQYEIIRLLSAGNESLFVVGDSNQAIYEWRGAQSAHMQYSLVQDFPPITTFQLKTNYRS 614
QY I +LL+ G+ ++ VVGD++Q+IY WRGA ++ + +D+P T L+ NYRS
Sbjct: 225 GAQYNITKLLAGGHRNICVVGDADQSIYGWRGADMRNI-LNFERDYPEATVILLEQNYRS 283
Query: 613 TSNILKVASAILNNSGEAGINSSVKAFQAVKPSGETVYIRKLCNAAEEANYIALEIQGLA 434
T NIL+ A+A++ N+ ++ KA G+ + + + EA+YI E++ L
Sbjct: 284 TKNILEAANAVIENN----LDRKKKALWTDNVQGDPIVVYEGATEKNEASYIVREVERLH 339
Query: 433 SLYNVNWDNIAILYRTHFQSYFIEASLSRLGIPHITVGSKPFCSNKEIKIVISYLHLIGN 254
+++NV + +IA+LYRT+ QS IE + G+P+ VG+ F +EIK +I+YL +I N
Sbjct: 340 TMFNVKYGDIAVLYRTNAQSRNIEEAFYASGVPYSMVGAVRFYDRREIKDIIAYLRVIYN 399
Query: 253 LENQVALENIINIPNRGIGEKTISLLKEWSSSRNILLSNVLQD 125
+ ++L IIN+P RG+G+ T++ + E ++ I L ++ D
Sbjct: 400 PRDTLSLLRIINVPRRGLGQTTLARMAELAAEHRISLFEIITD 442
>ref|WP_009438961.1| ATP-dependent DNA helicase PcrA [Selenomonas sp. oral taxon 137]
gi|312974977|gb|EFR40439.1| ATP-dependent DNA helicase
PcrA [Selenomonas sp. oral taxon 137 str. F0430]
Length = 747
Score = 181 bits (459), Expect = 8e-43
Identities = 97/283 (34%), Positives = 165/283 (58%)
Frame = -2
Query: 973 AEFIYKVADIYELDLRRANAXXXXXXXXXXXXXXXXYPEILKDCRNKWKYLLVDEFQDID 794
AE + KV ++Y+ LR NA E+ + + K++Y+LVDE+QD +
Sbjct: 165 AEQVAKVYELYQSKLRANNALDFDDLLMLTVAVLSQNEEVRRKYQEKFRYILVDEYQDTN 224
Query: 793 DVQYEIIRLLSAGNESLFVVGDSNQAIYEWRGAQSAHMQYSLVQDFPPITTFQLKTNYRS 614
QY I +LL+ G+ ++ VVGD++Q+IY WRGA ++ + +D+P T L+ NYRS
Sbjct: 225 GAQYNITKLLAGGHRNICVVGDADQSIYGWRGADMRNI-LNFERDYPEATVILLEQNYRS 283
Query: 613 TSNILKVASAILNNSGEAGINSSVKAFQAVKPSGETVYIRKLCNAAEEANYIALEIQGLA 434
T NIL+ A+A++ N+ ++ KA G+ + + + EA+YI E++ L
Sbjct: 284 TKNILEAANAVIENN----LDRKKKALWTDNVQGDPIVVYEGATEKNEASYIVREVERLH 339
Query: 433 SLYNVNWDNIAILYRTHFQSYFIEASLSRLGIPHITVGSKPFCSNKEIKIVISYLHLIGN 254
+++NV + +IA+LYRT+ QS IE + G+P+ VG+ F +EIK +I+YL +I N
Sbjct: 340 TMFNVKYGDIAVLYRTNAQSRNIEEAFYASGVPYSMVGAVRFYDRREIKDIIAYLRVIYN 399
Query: 253 LENQVALENIINIPNRGIGEKTISLLKEWSSSRNILLSNVLQD 125
+ ++L IIN+P RG+G+ T++ + E ++ I L ++ D
Sbjct: 400 PRDTLSLLRIINVPRRGLGQTTLARMAELAAEHRISLFEIITD 442
>ref|WP_019542011.1| ATP-dependent DNA helicase PcrA [Selenomonas bovis]
Length = 767
Score = 179 bits (453), Expect = 4e-42
Identities = 108/323 (33%), Positives = 177/323 (54%), Gaps = 5/323 (1%)
Frame = -2
Query: 967 FIYKVADIYEL---DLRRANAXXXXXXXXXXXXXXXXYPEILKDCRNKWKYLLVDEFQDI 797
F KVA++YEL LR +NA +I + + +++Y+LVDE+QD
Sbjct: 164 FQEKVAEVYELYAQRLRESNALDFDDLLMVSVRLLEEQEDIRQKYQRRFQYILVDEYQDT 223
Query: 796 DDVQYEIIRLLSAGNESLFVVGDSNQAIYEWRGAQSAHMQYSLVQDFPPITTFQLKTNYR 617
+ QY++ ++L+ + +L VVGD++Q+IY WRGA ++ QD+P TT +L+ NYR
Sbjct: 224 NGAQYQLTKILAGAHHNLCVVGDADQSIYGWRGADIRNIM-DFEQDYPDATTIKLEQNYR 282
Query: 616 STSNILKVASAILNNSGEAGINSSVKAFQAVKPSGETVYIRKLCNAAEEANYIALEIQGL 437
ST IL A+A++ E + KA P GE + + + +EA+++A I
Sbjct: 283 STKTILAAANAVI----EHNVQRKKKALWTENPQGEKITSYQAMDEKDEAHFVATTIMKQ 338
Query: 436 ASLYNVNWDNIAILYRTHFQSYFIEASLSRLGIPHITVGSKPFCSNKEIKIVISYLHLIG 257
++ ++ ++AILYRT+ QS +E L IP+ VG F KEIK +++YL +I
Sbjct: 339 KDIFQASYGDMAILYRTNAQSRILEEGLMSAHIPYTMVGGLKFYDRKEIKDIVAYLRVIF 398
Query: 256 NLENQVALENIINIPNRGIGEKTISLLKEWSSSRNILLSNVL--QDIYAGNATAKELRIT 83
N + V+L IIN+P RGIG+ ++S L E++++ ++ L +V+ QD+ A IT
Sbjct: 399 NPLDNVSLLRIINVPKRGIGQTSLSKLMEYAAANDLTLFDVISNQDVLAAIP-----GIT 453
Query: 82 KRASDSLKLFWKLIEELNMLSRN 14
R L+LF I + + N
Sbjct: 454 SRVKRPLELFTSFIFNIMAIQSN 476
>ref|YP_006892317.1| ATP-dependent DNA helicase PcrA [Geobacter sulfurreducens KN400]
gi|504365079|ref|WP_014552181.1| ATP-dependent DNA
helicase PcrA [Geobacter sulfurreducens]
gi|298507445|gb|ADI86168.1| ATP-dependent DNA helicase
PcrA [Geobacter sulfurreducens KN400]
Length = 739
Score = 178 bits (451), Expect = 6e-42
Identities = 113/370 (30%), Positives = 189/370 (51%), Gaps = 5/370 (1%)
Frame = -2
Query: 1207 VQTYHSRRTKILMSIVPEIS--QFLECYNDKKNDTKKKGVTISADAVEELYSFICRARLN 1034
+ T+HS +IL + + Y+DK + K V E+ + A
Sbjct: 82 IATFHSTCARILRREIHHLGYDSSFAIYDDKDSGKLLKEVMAGLGLDEKRFPATSLASAI 141
Query: 1033 KMCLFIAEKG--QRNIPAKTLPAEFIYKVADIYELDLRRANAXXXXXXXXXXXXXXXXYP 860
C +G ++PA T E + +V Y+ L++ NA +P
Sbjct: 142 DDC---KNRGLAPEDLPADTFTGEVVGRVYAAYQERLKKCNALDFGDLIMLTVRLFEEHP 198
Query: 859 EILKDCRNKWKYLLVDEFQDIDDVQYEIIRLLSAGNESLFVVGDSNQAIYEWRGAQSAHM 680
+L+ R++W+++LVDE+QD + +QY ++RLL+ + +L VVGD +Q+IY WRGA ++
Sbjct: 199 VVLERYRDQWRWILVDEYQDTNPIQYRLVRLLAGEHRNLCVVGDDDQSIYRWRGADIRNI 258
Query: 679 QYSLVQDFPPITTFQLKTNYRSTSNILKVASAIL-NNSGEAGINSSVKAFQAVKPSGETV 503
+DFP +TT +L+ NYRST NIL A A++ N G K + P G+ +
Sbjct: 259 -LDFEKDFPGVTTIKLEQNYRSTRNILAAAGAVVARNRGR-----KAKTLWSENPPGDPI 312
Query: 502 YIRKLCNAAEEANYIALEIQGLASLYNVNWDNIAILYRTHFQSYFIEASLSRLGIPHITV 323
R+L + +EA ++ EI+ + ++A+ YRT+ QS +E +L GIP+ V
Sbjct: 313 VYRRLADERDEARFVCREIERYVRRGG-DLRDVAVFYRTNAQSRVVEDALVADGIPYHMV 371
Query: 322 GSKPFCSNKEIKIVISYLHLIGNLENQVALENIINIPNRGIGEKTISLLKEWSSSRNILL 143
G F E+K V++YL ++ N ++V+L+ IIN+P RGIG T+ + E + R I +
Sbjct: 372 GGMRFYERMEVKDVLAYLRVLANPADEVSLKRIINVPARGIGPGTVDKISELAVRRGITI 431
Query: 142 SNVLQDIYAG 113
+ L + G
Sbjct: 432 LDALGEAATG 441
Score = 58.2 bits (139), Expect = 1e-05
Identities = 36/107 (33%), Positives = 64/107 (59%), Gaps = 2/107 (1%)
Frame = -2
Query: 1552 VPPSEITCITYTKKAANELKERLDNLLGHEVSRQLKVGTVHSICASIIRKSRQISDYHLS 1373
VP +I +T+T KAA E++ER++ L+G EV + T HS CA I+R R+I +HL
Sbjct: 49 VPARQILAVTFTNKAAGEMRERVEKLVGGEVP---LIATFHSTCARILR--REI--HHLG 101
Query: 1372 VD--YSICDEDDSRRILRNILQEACHGFDGIKASRQAMQTTVMECQS 1238
D ++I D+ DS ++L+ ++ A G D + ++ + + +C++
Sbjct: 102 YDSSFAIYDDKDSGKLLKEVM--AGLGLDEKRFPATSLASAIDDCKN 146
>ref|WP_009728005.1| ATP-dependent DNA helicase PcrA [Selenomonas sp. F0473]
gi|425708673|gb|EKU71712.1| ATP-dependent DNA helicase
PcrA [Selenomonas sp. F0473]
Length = 748
Score = 177 bits (450), Expect = 8e-42
Identities = 96/283 (33%), Positives = 164/283 (57%)
Frame = -2
Query: 973 AEFIYKVADIYELDLRRANAXXXXXXXXXXXXXXXXYPEILKDCRNKWKYLLVDEFQDID 794
AE + KV ++Y+ LR NA E+ K + K++Y+LVDE+QD +
Sbjct: 165 AEQVAKVYELYQTKLRANNALDFDDLLMLTVAVLLQNEEVRKKYQEKFRYILVDEYQDTN 224
Query: 793 DVQYEIIRLLSAGNESLFVVGDSNQAIYEWRGAQSAHMQYSLVQDFPPITTFQLKTNYRS 614
QY+I +LL+ G+ ++ VVGD++Q+IY WRGA ++ + +D+P T L+ NYRS
Sbjct: 225 GAQYQITKLLADGHRNICVVGDADQSIYGWRGADMRNI-LNFERDYPEATVILLEQNYRS 283
Query: 613 TSNILKVASAILNNSGEAGINSSVKAFQAVKPSGETVYIRKLCNAAEEANYIALEIQGLA 434
T NIL A+A++ N+ + KA G+ + + + EA YI E++ L
Sbjct: 284 TKNILAAANAVIENN----LERKKKALWTDNAEGDPIVVYEGSTEKNEAAYIVREVERLH 339
Query: 433 SLYNVNWDNIAILYRTHFQSYFIEASLSRLGIPHITVGSKPFCSNKEIKIVISYLHLIGN 254
+++++ + +IA+LYRT+ QS IE + G+P+ VG+ F +EI+ +I+YL +I N
Sbjct: 340 TIFHMKYGDIAVLYRTNAQSRNIEEAFYASGVPYSMVGAVRFYDRREIRDIIAYLRVIYN 399
Query: 253 LENQVALENIINIPNRGIGEKTISLLKEWSSSRNILLSNVLQD 125
+ ++L IIN+P RG+G+ T+S + E ++ + L +V+ D
Sbjct: 400 PRDTLSLLRIINVPRRGLGQTTLSRMAETAAEHRVSLFDVITD 442
>ref|NP_954451.1| ATP-dependent DNA helicase PcrA [Geobacter sulfurreducens PCA]
gi|499246482|ref|WP_010944022.1| ATP-dependent DNA
helicase PcrA [Geobacter sulfurreducens]
gi|39985447|gb|AAR36801.1| ATP-dependent DNA helicase
PcrA [Geobacter sulfurreducens PCA]
Length = 739
Score = 177 bits (450), Expect = 8e-42
Identities = 113/370 (30%), Positives = 189/370 (51%), Gaps = 5/370 (1%)
Frame = -2
Query: 1207 VQTYHSRRTKILMSIVPEIS--QFLECYNDKKNDTKKKGVTISADAVEELYSFICRARLN 1034
+ T+HS +IL + + Y+DK + K V E+ + A
Sbjct: 82 IATFHSTCARILRREIHHLGYDSSFAIYDDKDSGKLLKEVMAGLGLDEKRFPATSLASAI 141
Query: 1033 KMCLFIAEKG--QRNIPAKTLPAEFIYKVADIYELDLRRANAXXXXXXXXXXXXXXXXYP 860
C +G ++PA T E + +V Y+ L++ NA +P
Sbjct: 142 DDC---KNRGLAPEDLPADTFTGEVVGRVYAAYQERLKKCNALDFGDLIMLTVRLFEEHP 198
Query: 859 EILKDCRNKWKYLLVDEFQDIDDVQYEIIRLLSAGNESLFVVGDSNQAIYEWRGAQSAHM 680
+L+ R++W+++LVDE+QD + +QY ++RLL+ + +L VVGD +Q+IY WRGA ++
Sbjct: 199 VVLERYRDQWRWILVDEYQDTNPIQYRLVRLLAGEHRNLCVVGDDDQSIYRWRGADIRNI 258
Query: 679 QYSLVQDFPPITTFQLKTNYRSTSNILKVASAIL-NNSGEAGINSSVKAFQAVKPSGETV 503
+DFP +TT +L+ NYRST NIL A A++ N G K + P G+ +
Sbjct: 259 -LDFEKDFPGVTTIKLEQNYRSTRNILAAAGAVVARNRGR-----KAKTLWSENPPGDPI 312
Query: 502 YIRKLCNAAEEANYIALEIQGLASLYNVNWDNIAILYRTHFQSYFIEASLSRLGIPHITV 323
R+L + +EA ++ EI+ + ++A+ YRT+ QS +E +L GIP+ V
Sbjct: 313 VYRRLADERDEARFVCREIERYVRRGG-DLRDVAVFYRTNAQSRVVEDALVADGIPYHMV 371
Query: 322 GSKPFCSNKEIKIVISYLHLIGNLENQVALENIINIPNRGIGEKTISLLKEWSSSRNILL 143
G F E+K V++YL ++ N ++V+L+ IIN+P RGIG T+ + E + R I +
Sbjct: 372 GGMRFYERMEVKDVLAYLRVLANPADEVSLKRIINVPARGIGPGTVDKISELAVRRGITV 431
Query: 142 SNVLQDIYAG 113
+ L + G
Sbjct: 432 LDALGEAATG 441
Score = 58.2 bits (139), Expect = 1e-05
Identities = 36/107 (33%), Positives = 64/107 (59%), Gaps = 2/107 (1%)
Frame = -2
Query: 1552 VPPSEITCITYTKKAANELKERLDNLLGHEVSRQLKVGTVHSICASIIRKSRQISDYHLS 1373
VP +I +T+T KAA E++ER++ L+G EV + T HS CA I+R R+I +HL
Sbjct: 49 VPARQILAVTFTNKAAGEMRERVEKLVGGEVP---LIATFHSTCARILR--REI--HHLG 101
Query: 1372 VD--YSICDEDDSRRILRNILQEACHGFDGIKASRQAMQTTVMECQS 1238
D ++I D+ DS ++L+ ++ A G D + ++ + + +C++
Sbjct: 102 YDSSFAIYDDKDSGKLLKEVM--AGLGLDEKRFPATSLASAIDDCKN 146
>ref|WP_008427205.1| ATP-dependent DNA helicase PcrA [Clostridium sp. Maddingley MBC34-26]
gi|410597196|gb|EKQ51829.1| ATP-dependent DNA helicase
PcrA [Clostridium sp. Maddingley MBC34-26]
Length = 755
Score = 177 bits (450), Expect = 8e-42
Identities = 103/321 (32%), Positives = 179/321 (55%), Gaps = 3/321 (0%)
Frame = -2
Query: 958 KVADIYEL---DLRRANAXXXXXXXXXXXXXXXXYPEILKDCRNKWKYLLVDEFQDIDDV 788
KVAD+YE+ L+ NA PE+L+ +NK+KY++VDE+QD +
Sbjct: 168 KVADVYEMYQKRLKENNALDFDDLIFKTVELFKSNPEVLEFYQNKFKYIMVDEYQDTNGA 227
Query: 787 QYEIIRLLSAGNESLFVVGDSNQAIYEWRGAQSAHMQYSLVQDFPPITTFQLKTNYRSTS 608
QYE+++LL++ +++ VVGD +Q IY+WRGA ++ +D+P +L+ NYRS
Sbjct: 228 QYELVKLLASKYKNICVVGDDDQCIYQWRGADITNI-LDFEKDYPGAKVIKLEQNYRSKG 286
Query: 607 NILKVASAILNNSGEAGINSSVKAFQAVKPSGETVYIRKLCNAAEEANYIALEIQGLASL 428
NIL A+ ++ N+ N K + + G + I + ++E +++ +IQ +
Sbjct: 287 NILNAANVVIVNNS----NRKSKVLRTEQEPGSKIKIYRAYADSDEGDFVGKQIQEIKEK 342
Query: 427 YNVNWDNIAILYRTHFQSYFIEASLSRLGIPHITVGSKPFCSNKEIKIVISYLHLIGNLE 248
+ N+++ AILYRT+ QS E SL R GIP+ VG F KEIK +++YL ++ N +
Sbjct: 343 EDKNYNDFAILYRTNAQSRIFEESLRRKGIPYKIVGGTRFYDRKEIKDILAYLKVLVNPQ 402
Query: 247 NQVALENIINIPNRGIGEKTISLLKEWSSSRNILLSNVLQDIYAGNATAKELRITKRASD 68
+ +++ IIN+P R IG+ T+S ++E+++ + L + L ++ + +T R
Sbjct: 403 DDISIRRIINVPKRSIGDATVSKVQEFATDFELNLWDALAEVRSIPT------LTPRNVS 456
Query: 67 SLKLFWKLIEELNMLSRNKTV 5
+++ F L+E L LS V
Sbjct: 457 TIEPFVTLMENLMELSETVPV 477
>ref|YP_003826115.1| ATP-dependent DNA helicase PcrA [Thermosediminibacter oceani DSM
16646] gi|503041538|ref|WP_013276514.1| ATP-dependent DNA
helicase PcrA [Thermosediminibacter oceani]
gi|302200922|gb|ADL08492.1| ATP-dependent DNA helicase
PcrA [Thermosediminibacter oceani DSM 16646]
Length = 731
Score = 176 bits (447), Expect = 2e-41
Identities = 99/318 (31%), Positives = 180/318 (56%)
Frame = -2
Query: 988 AKTLPAEFIYKVADIYELDLRRANAXXXXXXXXXXXXXXXXYPEILKDCRNKWKYLLVDE 809
AK + + + +V ++Y+ L+ +NA PE+L +N+++++LVDE
Sbjct: 159 AKDIREKAMSRVYELYQKRLKESNALDFDDLIMKTVELFRKNPEVLSYYQNRFRHILVDE 218
Query: 808 FQDIDDVQYEIIRLLSAGNESLFVVGDSNQAIYEWRGAQSAHMQYSLVQDFPPITTFQLK 629
+QD + QY +++LL+ + +L VVGD +Q+IY +RGA ++ +DFP T +L+
Sbjct: 219 YQDTNRAQYVLVKLLAEKHRNLCVVGDDDQSIYGFRGADIRNI-LDFEEDFPDATVIRLE 277
Query: 628 TNYRSTSNILKVASAILNNSGEAGINSSVKAFQAVKPSGETVYIRKLCNAAEEANYIALE 449
NYRST NIL A+++++++ + K+ G+ +Y+ L N EEA +IA E
Sbjct: 278 QNYRSTQNILDAANSVISHN----FDRKQKSLWTENGRGDKIYLATLGNEHEEAFFIARE 333
Query: 448 IQGLASLYNVNWDNIAILYRTHFQSYFIEASLSRLGIPHITVGSKPFCSNKEIKIVISYL 269
I+ L ++ N + + A+LYRT+ QS +E + ++G+P+ VG F +EIK +++YL
Sbjct: 334 IEKLVNMKNFRFRDFAVLYRTNAQSRVLEEMMVKMGLPYKIVGGVRFYQRREIKDILAYL 393
Query: 268 HLIGNLENQVALENIINIPNRGIGEKTISLLKEWSSSRNILLSNVLQDIYAGNATAKELR 89
++ N + V+L IIN+P RGIGE T+ LK + R + +++++ A
Sbjct: 394 RVVANPSDNVSLLRIINVPRRGIGEATVETLKLLAEEREKSVYHIMKEELA--------E 445
Query: 88 ITKRASDSLKLFWKLIEE 35
++ R L+ F +I++
Sbjct: 446 LSSRVRSKLRDFVDMIDD 463