BLASTX nr result

ID: Ephedra28_contig00021774 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00021774
         (691 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553479.2| PREDICTED: F-box/LRR-repeat protein 17-like ...    57   5e-06
gb|EOX94576.1| F-box/LRR-repeat protein 17 [Theobroma cacao]           57   5e-06
ref|XP_004172007.1| PREDICTED: F-box/LRR-repeat protein 17-like ...    57   7e-06
ref|XP_004146955.1| PREDICTED: F-box/LRR-repeat protein 17-like ...    57   7e-06

>ref|XP_003553479.2| PREDICTED: F-box/LRR-repeat protein 17-like [Glycine max]
          Length = 600

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 31/84 (36%), Positives = 42/84 (50%)
 Frame = +1

Query: 241 TVAAQAKKQGRRRGSYNCGKCGLPKKGHVCPXXXXXXXXXXXXXXHNVPHYASSPVSPSF 420
           TV++ AK+ G++RGSYNCG+CGLPKKGH C                     A +P S S 
Sbjct: 35  TVSSDAKRSGKKRGSYNCGRCGLPKKGHDCTGKT-----------------APTPTSASS 77

Query: 421 TDRINRSYSGKQPPYTHSGVKRSL 492
               + S+S    P + S  +R L
Sbjct: 78  ATPSHSSFSAVSAPSSGSASRRPL 101


>gb|EOX94576.1| F-box/LRR-repeat protein 17 [Theobroma cacao]
          Length = 602

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 39/103 (37%), Positives = 52/103 (50%), Gaps = 8/103 (7%)
 Frame = +1

Query: 247 AAQAKKQGRRRGSYNCGKCGLPKKGHVCPXXXXXXXXXXXXXXHNVPHYASSPVS-PSFT 423
           AA   K  +RRGSYNCG+CGLPKKGHVC                + P   S+P S P+ T
Sbjct: 22  AAFDLKPAKRRGSYNCGRCGLPKKGHVC----------QVINTDSTPTLTSTPTSTPATT 71

Query: 424 DRINRSYSGKQPPY-----THSGVKRSLDMMMGDV--SSPPLD 531
              + S S  +PP+      +S ++R+L     D+   SP LD
Sbjct: 72  TITDASSSAARPPHHPPRQPYSHLRRALSFDDIDIRCDSPELD 114


>ref|XP_004172007.1| PREDICTED: F-box/LRR-repeat protein 17-like [Cucumis sativus]
          Length = 587

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 33/90 (36%), Positives = 44/90 (48%)
 Frame = +1

Query: 241 TVAAQAKKQGRRRGSYNCGKCGLPKKGHVCPXXXXXXXXXXXXXXHNVPHYASSPVSPSF 420
           TV+    K+G++RGSYNCG+CGLPKKGHVC                 V    S+P     
Sbjct: 13  TVSNSDLKRGKKRGSYNCGRCGLPKKGHVC-------NLNSSSTTTTVTAITSTPT---- 61

Query: 421 TDRINRSYSGKQPPYTHSGVKRSLDMMMGD 510
           TD  N +      P +HS ++R+L     D
Sbjct: 62  TDSTNSARGSTIDPASHSHLRRALSFDEAD 91


>ref|XP_004146955.1| PREDICTED: F-box/LRR-repeat protein 17-like [Cucumis sativus]
          Length = 587

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 33/90 (36%), Positives = 44/90 (48%)
 Frame = +1

Query: 241 TVAAQAKKQGRRRGSYNCGKCGLPKKGHVCPXXXXXXXXXXXXXXHNVPHYASSPVSPSF 420
           TV+    K+G++RGSYNCG+CGLPKKGHVC                 V    S+P     
Sbjct: 13  TVSNSDLKRGKKRGSYNCGRCGLPKKGHVC-------NLNSSSTTTTVTAITSTPT---- 61

Query: 421 TDRINRSYSGKQPPYTHSGVKRSLDMMMGD 510
           TD  N +      P +HS ++R+L     D
Sbjct: 62  TDSTNSARGSTIDPASHSHLRRALSFDEAD 91


Top