BLASTX nr result
ID: Ephedra28_contig00021769
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00021769
(369 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY10516.1| Polynucleotidyl transferase, ribonuclease H fold ... 98 1e-18
gb|EOY10515.1| Polynucleotidyl transferase, putative isoform 1 [... 98 1e-18
ref|XP_002319182.2| 3'-5' exonuclease domain-containing family p... 96 4e-18
ref|XP_004309739.1| PREDICTED: exosome component 10-like [Fragar... 95 8e-18
ref|XP_002325430.2| 3'-5' exonuclease domain-containing family p... 94 2e-17
ref|XP_004168269.1| PREDICTED: exosome component 10-like [Cucumi... 91 1e-16
ref|XP_004149112.1| PREDICTED: exosome component 10-like [Cucumi... 91 1e-16
ref|XP_002269553.2| PREDICTED: exosome component 10-like [Vitis ... 91 2e-16
emb|CBI31221.3| unnamed protein product [Vitis vinifera] 91 2e-16
gb|EXC31704.1| Exosome component 10 [Morus notabilis] 90 4e-16
gb|EMJ05862.1| hypothetical protein PRUPE_ppa001105mg [Prunus pe... 89 8e-16
ref|XP_006479159.1| PREDICTED: exosome complex exonuclease rrp6-... 88 1e-15
ref|XP_006443482.1| hypothetical protein CICLE_v10018753mg [Citr... 88 1e-15
ref|XP_006285759.1| hypothetical protein CARUB_v10007233mg [Caps... 88 1e-15
ref|XP_002525702.1| 3'-5' exonuclease, putative [Ricinus communi... 88 1e-15
ref|XP_002870452.1| hypothetical protein ARALYDRAFT_355577 [Arab... 87 2e-15
ref|XP_006826338.1| hypothetical protein AMTR_s00004p00111480 [A... 87 2e-15
dbj|BAC43334.1| putative nucleolar protein [Arabidopsis thaliana] 87 2e-15
ref|NP_198440.2| exosome complex exonuclease RRP6L2 [Arabidopsis... 87 2e-15
gb|ESW23770.1| hypothetical protein PHAVU_004G073900g [Phaseolus... 87 3e-15
>gb|EOY10516.1| Polynucleotidyl transferase, ribonuclease H fold protein with HRDC
domain, putative isoform 2, partial [Theobroma cacao]
gi|508718620|gb|EOY10517.1| Polynucleotidyl transferase,
ribonuclease H fold protein with HRDC domain, putative
isoform 2, partial [Theobroma cacao]
Length = 873
Score = 97.8 bits (242), Expect = 1e-18
Identities = 55/126 (43%), Positives = 80/126 (63%), Gaps = 6/126 (4%)
Frame = -2
Query: 368 QLCVVAALYEWRDNIARVEDESTGYILPNKVLMKIARKIPTTLSDLRMLVRGAHSFVEQN 189
QL +VAAL EWRD IAR EDESTGY+LPNK L++IA+++P T S LR L++ H +VE+N
Sbjct: 442 QLAIVAALCEWRDIIARAEDESTGYVLPNKTLLEIAKQMPVTASKLRRLLKSKHPYVERN 501
Query: 188 LASVLKVIRDSKGVKMQAVQNAL---KAAEKLPVNQTLRGGMERL---DNQSLQSPLTDS 27
L SV+ +IR S +QNA+ +AA++L + + L E + + + P T +
Sbjct: 502 LGSVVTIIRHS-------MQNAIVFEEAAQQLRMGRVLNASEEHVVVNEGAKILPPETST 554
Query: 26 GVTKTN 9
+T N
Sbjct: 555 DLTMAN 560
>gb|EOY10515.1| Polynucleotidyl transferase, putative isoform 1 [Theobroma cacao]
Length = 920
Score = 97.8 bits (242), Expect = 1e-18
Identities = 55/126 (43%), Positives = 80/126 (63%), Gaps = 6/126 (4%)
Frame = -2
Query: 368 QLCVVAALYEWRDNIARVEDESTGYILPNKVLMKIARKIPTTLSDLRMLVRGAHSFVEQN 189
QL +VAAL EWRD IAR EDESTGY+LPNK L++IA+++P T S LR L++ H +VE+N
Sbjct: 489 QLAIVAALCEWRDIIARAEDESTGYVLPNKTLLEIAKQMPVTASKLRRLLKSKHPYVERN 548
Query: 188 LASVLKVIRDSKGVKMQAVQNAL---KAAEKLPVNQTLRGGMERL---DNQSLQSPLTDS 27
L SV+ +IR S +QNA+ +AA++L + + L E + + + P T +
Sbjct: 549 LGSVVTIIRHS-------MQNAIVFEEAAQQLRMGRVLNASEEHVVVNEGAKILPPETST 601
Query: 26 GVTKTN 9
+T N
Sbjct: 602 DLTMAN 607
>ref|XP_002319182.2| 3'-5' exonuclease domain-containing family protein [Populus
trichocarpa] gi|550325063|gb|EEE95105.2| 3'-5'
exonuclease domain-containing family protein [Populus
trichocarpa]
Length = 911
Score = 96.3 bits (238), Expect = 4e-18
Identities = 43/71 (60%), Positives = 59/71 (83%)
Frame = -2
Query: 368 QLCVVAALYEWRDNIARVEDESTGYILPNKVLMKIARKIPTTLSDLRMLVRGAHSFVEQN 189
QL +VA LYEWRD IAR EDESTGYILPNK L++IA+++P T+S LR L++ HS++E++
Sbjct: 483 QLAIVAGLYEWRDAIARAEDESTGYILPNKTLLEIAKEMPVTISKLRQLLKSKHSYIERH 542
Query: 188 LASVLKVIRDS 156
L+SV+ +IR S
Sbjct: 543 LSSVVSIIRHS 553
>ref|XP_004309739.1| PREDICTED: exosome component 10-like [Fragaria vesca subsp. vesca]
Length = 771
Score = 95.1 bits (235), Expect = 8e-18
Identities = 51/113 (45%), Positives = 72/113 (63%)
Frame = -2
Query: 368 QLCVVAALYEWRDNIARVEDESTGYILPNKVLMKIARKIPTTLSDLRMLVRGAHSFVEQN 189
QL +V+ L EWRD +AR EDESTGYILPNK L+++A+++P T + LR LV+ H+++EQ+
Sbjct: 373 QLAIVSGLCEWRDVVARTEDESTGYILPNKTLLELAKQMPDTTNKLRRLVKSKHAYIEQH 432
Query: 188 LASVLKVIRDSKGVKMQAVQNALKAAEKLPVNQTLRGGMERLDNQSLQSPLTD 30
LASV+ VIR S MQ AAE+L + E + + + PL D
Sbjct: 433 LASVVSVIRHS----MQNAAFFEAAAERLKLGCLEMASEENVLDSDISEPLPD 481
>ref|XP_002325430.2| 3'-5' exonuclease domain-containing family protein [Populus
trichocarpa] gi|550316869|gb|EEE99811.2| 3'-5'
exonuclease domain-containing family protein [Populus
trichocarpa]
Length = 823
Score = 94.0 bits (232), Expect = 2e-17
Identities = 43/71 (60%), Positives = 58/71 (81%)
Frame = -2
Query: 368 QLCVVAALYEWRDNIARVEDESTGYILPNKVLMKIARKIPTTLSDLRMLVRGAHSFVEQN 189
QL +VA LYEWRD IAR EDESTGYILPNK L++IA+++P T S LR L++ HS++E++
Sbjct: 480 QLAIVAGLYEWRDAIARAEDESTGYILPNKTLLEIAKEMPVTPSKLRRLLKSKHSYIERH 539
Query: 188 LASVLKVIRDS 156
L+SV+ +IR S
Sbjct: 540 LSSVVSIIRHS 550
>ref|XP_004168269.1| PREDICTED: exosome component 10-like [Cucumis sativus]
Length = 935
Score = 91.3 bits (225), Expect = 1e-16
Identities = 40/71 (56%), Positives = 57/71 (80%)
Frame = -2
Query: 368 QLCVVAALYEWRDNIARVEDESTGYILPNKVLMKIARKIPTTLSDLRMLVRGAHSFVEQN 189
QL V A L+EWRD +AR EDESTGYILPNK L++IA+++P T++ LR L++ H ++E+N
Sbjct: 472 QLAVAAGLFEWRDVVARAEDESTGYILPNKTLLEIAKQMPVTVNKLRRLLKSKHPYIERN 531
Query: 188 LASVLKVIRDS 156
LAS++ +IR S
Sbjct: 532 LASIVTIIRHS 542
>ref|XP_004149112.1| PREDICTED: exosome component 10-like [Cucumis sativus]
Length = 936
Score = 91.3 bits (225), Expect = 1e-16
Identities = 40/71 (56%), Positives = 57/71 (80%)
Frame = -2
Query: 368 QLCVVAALYEWRDNIARVEDESTGYILPNKVLMKIARKIPTTLSDLRMLVRGAHSFVEQN 189
QL V A L+EWRD +AR EDESTGYILPNK L++IA+++P T++ LR L++ H ++E+N
Sbjct: 472 QLAVAAGLFEWRDVVARAEDESTGYILPNKTLLEIAKQMPVTVNKLRRLLKSKHPYIERN 531
Query: 188 LASVLKVIRDS 156
LAS++ +IR S
Sbjct: 532 LASIVTIIRHS 542
>ref|XP_002269553.2| PREDICTED: exosome component 10-like [Vitis vinifera]
Length = 931
Score = 90.9 bits (224), Expect = 2e-16
Identities = 52/114 (45%), Positives = 71/114 (62%), Gaps = 8/114 (7%)
Frame = -2
Query: 368 QLCVVAALYEWRDNIARVEDESTGYILPNKVLMKIARKIPTTLSDLRMLVRGAHSFVEQN 189
QL +VA L+EWRD +AR EDESTGYILPNK L++IA+++P T S LR L++ H +VE+N
Sbjct: 467 QLAIVAGLFEWRDVVARAEDESTGYILPNKTLLEIAKQMPVTTSKLRRLLKSKHPYVERN 526
Query: 188 LASVLKVIRDS--KGVKMQAVQNALK------AAEKLPVNQTLRGGMERLDNQS 51
L V+ +IR S +A LK A+E V+ T G E L ++S
Sbjct: 527 LGPVVSIIRHSILNAAAFEAAAQHLKEGHIGTASEDNTVDTT---GFEALPSES 577
>emb|CBI31221.3| unnamed protein product [Vitis vinifera]
Length = 901
Score = 90.9 bits (224), Expect = 2e-16
Identities = 52/114 (45%), Positives = 71/114 (62%), Gaps = 8/114 (7%)
Frame = -2
Query: 368 QLCVVAALYEWRDNIARVEDESTGYILPNKVLMKIARKIPTTLSDLRMLVRGAHSFVEQN 189
QL +VA L+EWRD +AR EDESTGYILPNK L++IA+++P T S LR L++ H +VE+N
Sbjct: 437 QLAIVAGLFEWRDVVARAEDESTGYILPNKTLLEIAKQMPVTTSKLRRLLKSKHPYVERN 496
Query: 188 LASVLKVIRDS--KGVKMQAVQNALK------AAEKLPVNQTLRGGMERLDNQS 51
L V+ +IR S +A LK A+E V+ T G E L ++S
Sbjct: 497 LGPVVSIIRHSILNAAAFEAAAQHLKEGHIGTASEDNTVDTT---GFEALPSES 547
>gb|EXC31704.1| Exosome component 10 [Morus notabilis]
Length = 1017
Score = 89.7 bits (221), Expect = 4e-16
Identities = 41/71 (57%), Positives = 55/71 (77%)
Frame = -2
Query: 368 QLCVVAALYEWRDNIARVEDESTGYILPNKVLMKIARKIPTTLSDLRMLVRGAHSFVEQN 189
QL +VA L EWRD +AR EDESTGYILPNK L++IA+++P S LR LV+ H ++E+N
Sbjct: 507 QLAIVAGLCEWRDVVARAEDESTGYILPNKTLLEIAKQMPDATSKLRRLVKSKHPYIERN 566
Query: 188 LASVLKVIRDS 156
L SV+ +IR+S
Sbjct: 567 LGSVVSIIRNS 577
>gb|EMJ05862.1| hypothetical protein PRUPE_ppa001105mg [Prunus persica]
Length = 908
Score = 88.6 bits (218), Expect = 8e-16
Identities = 41/71 (57%), Positives = 56/71 (78%)
Frame = -2
Query: 368 QLCVVAALYEWRDNIARVEDESTGYILPNKVLMKIARKIPTTLSDLRMLVRGAHSFVEQN 189
QL +V+ L EWRD +AR EDESTGYILPNK L++IA+++P+T S L+ LV+ H +VE+N
Sbjct: 472 QLAIVSGLCEWRDVVARAEDESTGYILPNKTLLEIAKQMPSTTSKLKRLVKSKHPYVERN 531
Query: 188 LASVLKVIRDS 156
LASV+ +I S
Sbjct: 532 LASVVSIIGHS 542
>ref|XP_006479159.1| PREDICTED: exosome complex exonuclease rrp6-like isoform X2 [Citrus
sinensis]
Length = 804
Score = 87.8 bits (216), Expect = 1e-15
Identities = 44/89 (49%), Positives = 63/89 (70%)
Frame = -2
Query: 368 QLCVVAALYEWRDNIARVEDESTGYILPNKVLMKIARKIPTTLSDLRMLVRGAHSFVEQN 189
QL VVA L EWRD IAR +DESTGY+LPN+ L++IA+++PTT + LR L++ HS++E+
Sbjct: 454 QLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERY 513
Query: 188 LASVLKVIRDSKGVKMQAVQNALKAAEKL 102
+ VL +I++S MQ N A+KL
Sbjct: 514 MGPVLSIIKNS----MQNAANFEVIAQKL 538
>ref|XP_006443482.1| hypothetical protein CICLE_v10018753mg [Citrus clementina]
gi|568850949|ref|XP_006479158.1| PREDICTED: exosome
complex exonuclease rrp6-like isoform X1 [Citrus
sinensis] gi|557545744|gb|ESR56722.1| hypothetical
protein CICLE_v10018753mg [Citrus clementina]
Length = 923
Score = 87.8 bits (216), Expect = 1e-15
Identities = 44/89 (49%), Positives = 63/89 (70%)
Frame = -2
Query: 368 QLCVVAALYEWRDNIARVEDESTGYILPNKVLMKIARKIPTTLSDLRMLVRGAHSFVEQN 189
QL VVA L EWRD IAR +DESTGY+LPN+ L++IA+++PTT + LR L++ HS++E+
Sbjct: 454 QLAVVAGLCEWRDVIARADDESTGYVLPNRTLIEIAKQLPTTAAKLRRLLKSKHSYIERY 513
Query: 188 LASVLKVIRDSKGVKMQAVQNALKAAEKL 102
+ VL +I++S MQ N A+KL
Sbjct: 514 MGPVLSIIKNS----MQNAANFEVIAQKL 538
>ref|XP_006285759.1| hypothetical protein CARUB_v10007233mg [Capsella rubella]
gi|482554464|gb|EOA18657.1| hypothetical protein
CARUB_v10007233mg [Capsella rubella]
Length = 856
Score = 87.8 bits (216), Expect = 1e-15
Identities = 40/71 (56%), Positives = 56/71 (78%)
Frame = -2
Query: 368 QLCVVAALYEWRDNIARVEDESTGYILPNKVLMKIARKIPTTLSDLRMLVRGAHSFVEQN 189
QL +VA L EWRD IAR EDESTGY+LPNKVL+ IA+++P ++S LR +++ H ++E+N
Sbjct: 483 QLAIVAGLCEWRDFIARAEDESTGYVLPNKVLLDIAKEMPLSVSKLRRMLKSKHPYIERN 542
Query: 188 LASVLKVIRDS 156
+ SV+ VIR S
Sbjct: 543 VDSVVSVIRQS 553
>ref|XP_002525702.1| 3'-5' exonuclease, putative [Ricinus communis]
gi|223535002|gb|EEF36685.1| 3'-5' exonuclease, putative
[Ricinus communis]
Length = 857
Score = 87.8 bits (216), Expect = 1e-15
Identities = 50/106 (47%), Positives = 66/106 (62%)
Frame = -2
Query: 368 QLCVVAALYEWRDNIARVEDESTGYILPNKVLMKIARKIPTTLSDLRMLVRGAHSFVEQN 189
QL +VA L EWRD IAR EDESTG+ILPNK L++IA+++P T LR ++ H ++E+N
Sbjct: 451 QLAIVAGLCEWRDVIARTEDESTGFILPNKTLLEIAKQMPVTPQKLRRALKSKHPYIERN 510
Query: 188 LASVLKVIRDSKGVKMQAVQNALKAAEKLPVNQTLRGGMERLDNQS 51
L SV+ V+R A+QN AAE Q L+ G DN S
Sbjct: 511 LGSVVNVVR-------HAMQN---AAEFEAAAQRLKEGCIETDNLS 546
>ref|XP_002870452.1| hypothetical protein ARALYDRAFT_355577 [Arabidopsis lyrata subsp.
lyrata] gi|297316288|gb|EFH46711.1| hypothetical protein
ARALYDRAFT_355577 [Arabidopsis lyrata subsp. lyrata]
Length = 867
Score = 87.4 bits (215), Expect = 2e-15
Identities = 39/71 (54%), Positives = 56/71 (78%)
Frame = -2
Query: 368 QLCVVAALYEWRDNIARVEDESTGYILPNKVLMKIARKIPTTLSDLRMLVRGAHSFVEQN 189
QL +VA L EWRD IAR EDESTGY+LPNKVL++IA+++P ++ LR +++ H ++E+N
Sbjct: 478 QLAIVAGLCEWRDFIARAEDESTGYVLPNKVLLEIAKEMPVSVGKLRRMLKSKHPYIERN 537
Query: 188 LASVLKVIRDS 156
+ SV+ VIR S
Sbjct: 538 VDSVVSVIRQS 548
>ref|XP_006826338.1| hypothetical protein AMTR_s00004p00111480 [Amborella trichopoda]
gi|548830652|gb|ERM93575.1| hypothetical protein
AMTR_s00004p00111480 [Amborella trichopoda]
Length = 950
Score = 87.0 bits (214), Expect = 2e-15
Identities = 48/114 (42%), Positives = 74/114 (64%)
Frame = -2
Query: 368 QLCVVAALYEWRDNIARVEDESTGYILPNKVLMKIARKIPTTLSDLRMLVRGAHSFVEQN 189
QL VVA L EWRD +AR EDESTGY+LPNK+L++IAR +PT++ LR LV+ H +V +N
Sbjct: 476 QLAVVAGLCEWRDQVARSEDESTGYVLPNKLLLEIARMMPTSMGKLRPLVKVRHPYVMKN 535
Query: 188 LASVLKVIRDSKGVKMQAVQNALKAAEKLPVNQTLRGGMERLDNQSLQSPLTDS 27
+ +V+ VI ++++NA A E + Q + +E+ +++Q + DS
Sbjct: 536 IGAVISVIE-------RSIENA-PAFESI-CEQMRQARLEKEREENMQKEILDS 580
>dbj|BAC43334.1| putative nucleolar protein [Arabidopsis thaliana]
Length = 578
Score = 87.0 bits (214), Expect = 2e-15
Identities = 39/71 (54%), Positives = 56/71 (78%)
Frame = -2
Query: 368 QLCVVAALYEWRDNIARVEDESTGYILPNKVLMKIARKIPTTLSDLRMLVRGAHSFVEQN 189
QL +VA L EWRD IAR EDESTGY+LPNKVL++IA+++P ++ LR +++ H ++E+N
Sbjct: 482 QLAIVAGLCEWRDFIARAEDESTGYVLPNKVLLEIAKEMPDSVGKLRRMLKSKHPYIERN 541
Query: 188 LASVLKVIRDS 156
+ SV+ VIR S
Sbjct: 542 VDSVVSVIRQS 552
>ref|NP_198440.2| exosome complex exonuclease RRP6L2 [Arabidopsis thaliana]
gi|160892401|gb|ABX52080.1| RRP6-like protein 2
[Arabidopsis thaliana] gi|332006642|gb|AED94025.1|
exosome complex exonuclease RRP6 [Arabidopsis thaliana]
Length = 870
Score = 87.0 bits (214), Expect = 2e-15
Identities = 39/71 (54%), Positives = 56/71 (78%)
Frame = -2
Query: 368 QLCVVAALYEWRDNIARVEDESTGYILPNKVLMKIARKIPTTLSDLRMLVRGAHSFVEQN 189
QL +VA L EWRD IAR EDESTGY+LPNKVL++IA+++P ++ LR +++ H ++E+N
Sbjct: 482 QLAIVAGLCEWRDFIARAEDESTGYVLPNKVLLEIAKEMPDSVGKLRRMLKSKHPYIERN 541
Query: 188 LASVLKVIRDS 156
+ SV+ VIR S
Sbjct: 542 VDSVVSVIRQS 552
>gb|ESW23770.1| hypothetical protein PHAVU_004G073900g [Phaseolus vulgaris]
Length = 880
Score = 86.7 bits (213), Expect = 3e-15
Identities = 40/71 (56%), Positives = 54/71 (76%)
Frame = -2
Query: 368 QLCVVAALYEWRDNIARVEDESTGYILPNKVLMKIARKIPTTLSDLRMLVRGAHSFVEQN 189
QL +V+ L EWRD +AR EDESTGY+LPNK +++IA++IP T S LR LV+ H +VE N
Sbjct: 476 QLAIVSGLCEWRDIVARAEDESTGYVLPNKSVLEIAKQIPLTTSKLRRLVKSKHPYVEHN 535
Query: 188 LASVLKVIRDS 156
L +V+ +IR S
Sbjct: 536 LDTVVSIIRHS 546