BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00021661
         (473 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006845197.1| hypothetical protein AMTR_s00005p00247650 [A...    67   2e-09
gb|EOY25342.1| Subunit B [Theobroma cacao]                             63   3e-08
emb|CAN79021.1| hypothetical protein VITISV_009443 [Vitis vinifera]    62   8e-08
ref|XP_002281078.1| PREDICTED: ribonuclease H2 subunit B [Vitis ...    62   1e-07
ref|XP_004138774.1| PREDICTED: ribonuclease H2 subunit B-like [C...    60   3e-07
ref|XP_006348740.1| PREDICTED: ribonuclease H2 subunit B-like is...    60   4e-07
ref|XP_006348739.1| PREDICTED: ribonuclease H2 subunit B-like is...    59   7e-07
ref|XP_004239098.1| PREDICTED: ribonuclease H2 subunit B-like [S...    59   7e-07
tpg|DAA37324.1| TPA: hypothetical protein ZEAMMB73_822759 [Zea m...    57   3e-06
ref|NP_001136505.1| hypothetical protein [Zea mays] gi|194695968...    57   3e-06
ref|XP_003522673.2| PREDICTED: ribonuclease H2 subunit B-like [G...    56   6e-06
ref|XP_004975957.1| PREDICTED: ribonuclease H2 subunit B-like [S...    55   7e-06
ref|XP_002446662.1| hypothetical protein SORBIDRAFT_06g020030 [S...    55   7e-06

>ref|XP_006845197.1| hypothetical protein AMTR_s00005p00247650 [Amborella trichopoda]
           gi|548847710|gb|ERN06872.1| hypothetical protein
           AMTR_s00005p00247650 [Amborella trichopoda]
          Length = 251

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 44/121 (36%), Positives = 60/121 (49%)
 Frame = +3

Query: 3   CKVNQLTETLPTLNRHYAGRNESDAVSDAIGFLGEYLKEDPWXXXXXXXXXXXXETIKKP 182
           CKVN L   LPTL+++YA R+E D + DA+  LGEYL E+PW            +   K 
Sbjct: 138 CKVNNLKLVLPTLDKNYAVRDEKDTLRDAVSLLGEYLSEEPWIRLLCSHLSISLDYAVKS 197

Query: 183 RMKEPTPMNLAFDSHLDSDFPGSNKSKGKTTQKNSASRGRPSQKKVDEKGLQKITSMFKK 362
            + +  P  +A +S L  D       KG+T        GR S+KK  E G   I  MF+K
Sbjct: 198 DVIDILP--IASESTLVQD------EKGRT----RTGTGRQSKKKKTETGSLNIKDMFRK 245

Query: 363 S 365
           +
Sbjct: 246 A 246


>gb|EOY25342.1| Subunit B [Theobroma cacao]
          Length = 280

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 41/124 (33%), Positives = 62/124 (50%), Gaps = 4/124 (3%)
 Frame = +3

Query: 6   KVNQLTETLPTLNRHYAGRNESDAVSDAIGFLGEYLKEDPWXXXXXXXXXXXXETIKKPR 185
           KV QL +TLP L+++YA R+E D  +DAI  +GEYLK +PW                K  
Sbjct: 160 KVCQLKQTLPALDQNYAARDEKDTSADAISIIGEYLKHEPWLKLLSNHF--------KLN 211

Query: 186 MKEPTPMNLAFD---SHLDSDFPGSNKSKGKTTQKNSASRGRPSQKKVD-EKGLQKITSM 353
           + E T +   F+   + ++S    SN S+GKT  +   +R +   KK   E   + I  M
Sbjct: 212 LLEATRIASDFEACSNAIESPMGASNPSQGKTRGEKKTARNQKQAKKAKIETESRNIKEM 271

Query: 354 FKKS 365
           F ++
Sbjct: 272 FSRA 275


>emb|CAN79021.1| hypothetical protein VITISV_009443 [Vitis vinifera]
          Length = 277

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 4/124 (3%)
 Frame = +3

Query: 6   KVNQLTETLPTLNRHYAGRNESDAVSDAIGFLGEYLKEDPWXXXXXXXXXXXXETIKKPR 185
           KV+QL + LPTL+++YA R++ D ++DAI  LGEYL+++PW                K  
Sbjct: 159 KVHQLKQILPTLDKNYAARDKKDTLTDAISILGEYLEDEPWLKLLCDHL--------KLN 210

Query: 186 MKEPTPMNLAFDSH---LDSDFPGSNKSKGKTTQKNSASR-GRPSQKKVDEKGLQKITSM 353
           + + T      + H    D+    SN+ +GK+  +   +R G+  +K   EK  + I  M
Sbjct: 211 LLDATMKAXVIEFHPTAPDNSLGSSNQLQGKSGNERKTTRPGKQPKKAKVEKDSRNIKDM 270

Query: 354 FKKS 365
           F ++
Sbjct: 271 FSRA 274


>ref|XP_002281078.1| PREDICTED: ribonuclease H2 subunit B [Vitis vinifera]
           gi|296081827|emb|CBI20832.3| unnamed protein product
           [Vitis vinifera]
          Length = 277

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 4/124 (3%)
 Frame = +3

Query: 6   KVNQLTETLPTLNRHYAGRNESDAVSDAIGFLGEYLKEDPWXXXXXXXXXXXXETIKKPR 185
           KV+QL + LPTL+++YA R++ D ++DAI  LGEYL+++PW                K  
Sbjct: 159 KVHQLKQILPTLDKNYAARDKKDTLTDAISILGEYLEDEPWLKLLCDHL--------KLN 210

Query: 186 MKEPTPMNLAFDSH---LDSDFPGSNKSKGKTTQKNSASR-GRPSQKKVDEKGLQKITSM 353
           + + T      + H    D+    SN+ +GK+  +   +R G+  +K   EK  + I  M
Sbjct: 211 LLDATMKASVIEFHPTAPDNSLGSSNQLQGKSGNERKTTRPGKQPKKAKVEKDSRNIKDM 270

Query: 354 FKKS 365
           F ++
Sbjct: 271 FSRA 274


>ref|XP_004138774.1| PREDICTED: ribonuclease H2 subunit B-like [Cucumis sativus]
           gi|449499524|ref|XP_004160839.1| PREDICTED: ribonuclease
           H2 subunit B-like [Cucumis sativus]
          Length = 281

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 42/123 (34%), Positives = 58/123 (47%), Gaps = 3/123 (2%)
 Frame = +3

Query: 6   KVNQLTETLPTLNRHYAGRNESDAVSDAIGFLGEYLKEDPW-XXXXXXXXXXXXETIKKP 182
           KV QL  TL TL+++YA R E + + DA+  LGEYLK+ PW             E  +K 
Sbjct: 159 KVCQLKRTLCTLDKNYAAREEKETLCDAVSILGEYLKDQPWLKLLCDHLKLNFAEATRKA 218

Query: 183 RMKE--PTPMNLAFDSHLDSDFPGSNKSKGKTTQKNSASRGRPSQKKVDEKGLQKITSMF 356
              E  PT +   FDS +  D  GS    G    +N    G+ ++K   E   + I  MF
Sbjct: 219 SDSERAPTSIENNFDS-ISQDKSGSRSGSGAKNTRN----GKQAKKPKVETESRNIKDMF 273

Query: 357 KKS 365
            K+
Sbjct: 274 SKA 276


>ref|XP_006348740.1| PREDICTED: ribonuclease H2 subunit B-like isoform X2 [Solanum
           tuberosum]
          Length = 332

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
 Frame = +3

Query: 6   KVNQLTETLPTLNRHYAGRNESDAVSDAIGFLGEYLKEDPWXXXXXXXXXXXXETIKKPR 185
           KV QL +TL TL+++YA R++ + ++DA+  +GEYLKE+PW            +   K  
Sbjct: 213 KVIQLKKTLLTLDKNYAARDKKEILTDAVSIIGEYLKEEPWLKLLCSKLSIDLQEDTKAS 272

Query: 186 MKEPTPMNLAFDSHLDSDFPGSNKSKGKTTQKNSASRG-RPSQKKVDEKGLQKITSMFKK 362
             E         S +D+ F   N  +G +  +  A++  RP++K   E     I  MF +
Sbjct: 273 NSE------MHSSPMDNSFESFNHEQGNSEGQEKATKSKRPTKKIKAETNSLNIKDMFSR 326

Query: 363 S 365
           +
Sbjct: 327 A 327


>ref|XP_006348739.1| PREDICTED: ribonuclease H2 subunit B-like isoform X1 [Solanum
           tuberosum]
          Length = 333

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
 Frame = +3

Query: 6   KVNQLTETLPTLNRHYAGRNESDAVSDAIGFLGEYLKEDPWXXXXXXXXXXXXETIKKPR 185
           KV QL +TL TL+++YA R++ + ++DA+  +GEYLKE+PW            +   K  
Sbjct: 213 KVIQLKKTLLTLDKNYAARDKKEILTDAVSIIGEYLKEEPWLKLLCSKLSIDLQEDTKAS 272

Query: 186 MKE--PTPMNLAFDSHLDSDFPGSNKSKGKTTQKNSASRGRPSQKKVDEKGLQKITSMFK 359
             E   +PM+ +F+S  + +  G+++ + K T+       RP++K   E     I  MF 
Sbjct: 273 NSEMHSSPMDNSFES-FNHEQQGNSEGQEKATKSK-----RPTKKIKAETNSLNIKDMFS 326

Query: 360 KS 365
           ++
Sbjct: 327 RA 328


>ref|XP_004239098.1| PREDICTED: ribonuclease H2 subunit B-like [Solanum lycopersicum]
          Length = 333

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 36/123 (29%), Positives = 64/123 (52%), Gaps = 3/123 (2%)
 Frame = +3

Query: 6   KVNQLTETLPTLNRHYAGRNESDAVSDAIGFLGEYLKEDPWXXXXXXXXXXXXETIKKPR 185
           KV QL +TL TL+++YA R++ + ++DA+  +GEYLKE+PW            +   K  
Sbjct: 213 KVIQLKKTLLTLDKNYAARDKKEILTDAVSIVGEYLKEEPWLKLLCSKLSIDLQEDTKAS 272

Query: 186 MKE--PTPMNLAFDSHLDSDFPGSNKSKGKTTQKNSASRGRPSQKKVD-EKGLQKITSMF 356
             E   +PM+ +F+S        +++ +GK+  +   +R +   KK+  E     I  MF
Sbjct: 273 NSEMHSSPMDYSFESF-------NHEQEGKSEGQEKTTRNKRQTKKIKVETNSLNIKDMF 325

Query: 357 KKS 365
            ++
Sbjct: 326 SRA 328


>tpg|DAA37324.1| TPA: hypothetical protein ZEAMMB73_822759 [Zea mays]
          Length = 301

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 32/120 (26%), Positives = 55/120 (45%)
 Frame = +3

Query: 3   CKVNQLTETLPTLNRHYAGRNESDAVSDAIGFLGEYLKEDPWXXXXXXXXXXXXETIKKP 182
           CKV  L E  P L ++YA + E + + +A+  + EYLK++PW              I   
Sbjct: 177 CKVYDLKEVFPKLGKNYAAQTEKEKLKEAVQMIREYLKDEPWLALLCKKLQLDINAITVD 236

Query: 183 RMKEPTPMNLAFDSHLDSDFPGSNKSKGKTTQKNSASRGRPSQKKVDEKGLQKITSMFKK 362
              +    ++  DS      P  +K+     +   +S+GRP++K   E G + I  MF++
Sbjct: 237 ATTKTAEASVYADSCPAPALPSESKTANGGAK---SSKGRPAKKAKTEVGSKNIKDMFRR 293


>ref|NP_001136505.1| hypothetical protein [Zea mays] gi|194695968|gb|ACF82068.1| unknown
           [Zea mays] gi|195619108|gb|ACG31384.1| hypothetical
           protein [Zea mays] gi|414586755|tpg|DAA37326.1| TPA:
           hypothetical protein ZEAMMB73_822759 [Zea mays]
          Length = 302

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 32/120 (26%), Positives = 55/120 (45%)
 Frame = +3

Query: 3   CKVNQLTETLPTLNRHYAGRNESDAVSDAIGFLGEYLKEDPWXXXXXXXXXXXXETIKKP 182
           CKV  L E  P L ++YA + E + + +A+  + EYLK++PW              I   
Sbjct: 178 CKVYDLKEVFPKLGKNYAAQTEKEKLKEAVQMIREYLKDEPWLALLCKKLQLDINAITVD 237

Query: 183 RMKEPTPMNLAFDSHLDSDFPGSNKSKGKTTQKNSASRGRPSQKKVDEKGLQKITSMFKK 362
              +    ++  DS      P  +K+     +   +S+GRP++K   E G + I  MF++
Sbjct: 238 ATTKTAEASVYADSCPAPALPSESKTANGGAK---SSKGRPAKKAKTEVGSKNIKDMFRR 294


>ref|XP_003522673.2| PREDICTED: ribonuclease H2 subunit B-like [Glycine max]
          Length = 338

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 40/121 (33%), Positives = 56/121 (46%), Gaps = 1/121 (0%)
 Frame = +3

Query: 6   KVNQLTETLPTLNRHYAGRNESDAVSDAIGFLGEYLKEDPW-XXXXXXXXXXXXETIKKP 182
           KV QL +TLP L+++YA ++E D + DA+  LGEYLKE+PW             E   K 
Sbjct: 221 KVCQLKQTLPKLDKNYAVQSEKDTLIDAVSILGEYLKEEPWLQLLCNHLKLNILEVTGKA 280

Query: 183 RMKEPTPMNLAFDSHLDSDFPGSNKSKGKTTQKNSASRGRPSQKKVDEKGLQKITSMFKK 362
           +       N    + L      SN  KG T     A +GR ++K   E     I  MF +
Sbjct: 281 QANAEGNNNSRLCNELQEQ---SNDKKGTT-----AKKGRQAKKVKLETESHNIKDMFSR 332

Query: 363 S 365
           +
Sbjct: 333 A 333


>ref|XP_004975957.1| PREDICTED: ribonuclease H2 subunit B-like [Setaria italica]
          Length = 283

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 32/120 (26%), Positives = 55/120 (45%)
 Frame = +3

Query: 3   CKVNQLTETLPTLNRHYAGRNESDAVSDAIGFLGEYLKEDPWXXXXXXXXXXXXETIKKP 182
           CKV  L E  P L ++YA + E + + +A+  + EYLK++PW              I K 
Sbjct: 159 CKVYNLKEVFPKLGKNYAAQEEKEQLKEAVQMIREYLKDEPWLTLLCKKLQLDMNEIIKD 218

Query: 183 RMKEPTPMNLAFDSHLDSDFPGSNKSKGKTTQKNSASRGRPSQKKVDEKGLQKITSMFKK 362
              + +  +   DS      P  +K    + +   +S+GR ++K   E G + I  MF++
Sbjct: 219 TTTKTSEASFYADSSPAPACPSESKVANGSAK---SSKGRAAKKPKTEVGSKNIKDMFRR 275


>ref|XP_002446662.1| hypothetical protein SORBIDRAFT_06g020030 [Sorghum bicolor]
           gi|241937845|gb|EES10990.1| hypothetical protein
           SORBIDRAFT_06g020030 [Sorghum bicolor]
          Length = 302

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 33/120 (27%), Positives = 53/120 (44%)
 Frame = +3

Query: 3   CKVNQLTETLPTLNRHYAGRNESDAVSDAIGFLGEYLKEDPWXXXXXXXXXXXXETIKKP 182
           CKV  L E  P L ++Y  + E+ ++ +A+  + EYLK+DPW              I   
Sbjct: 178 CKVYNLKEIFPKLGKNYGAQTENGSLKEAVQMIREYLKDDPWLTLLCKKLQLDINEITVD 237

Query: 183 RMKEPTPMNLAFDSHLDSDFPGSNKSKGKTTQKNSASRGRPSQKKVDEKGLQKITSMFKK 362
                   +   DS      P  +K+    T    +S+GRP++K   E G + I  MF++
Sbjct: 238 ATTTTGEASFYADSCPAPALPSESKT---ATGGAKSSKGRPAKKPKTEVGSKNIKDMFRR 294