BLASTX nr result

ID: Ephedra28_contig00021568 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00021568
         (593 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN39861.1| unknown [Picea sitchensis]                             115   9e-24

>gb|ACN39861.1| unknown [Picea sitchensis]
          Length = 1011

 Score =  115 bits (288), Expect = 9e-24
 Identities = 69/197 (35%), Positives = 115/197 (58%), Gaps = 1/197 (0%)
 Frame = +1

Query: 1   EFKFSKVRLFEDIQDKPNIIKLQKAILHNLSHEDAQYEEPMSYVEGQFSIMERLKEESCF 180
           E ++S V+LFE+I   P II+LQK IL +L+  +    +   + +GQ  +   L++ S F
Sbjct: 349 ECQYSTVQLFENIDSFPKIIELQKLILRDLTRSE-NIPQIRKHEDGQRELSRVLEDVSAF 407

Query: 181 IYVDNVLDAKELEKLLPVNLDKSRKLRLLLTARDENIRVGLNMENSKAIKVFRVAPLKAS 360
           IY+DN L  +EL +LLP +L K++K+RLL+TARD N+R    ++   A K +R+  + + 
Sbjct: 408 IYIDNALGERELGQLLPEDLSKAKKVRLLITARDLNVRKSCPLKT--APKEYRMKAISSM 465

Query: 361 EAEDLLAQEL-XXXXXXXXXXXXXXXLRICGGVPLALQLVSRYIRYENDKRKACNSIKEE 537
           EA +LL  E+                ++ CGG+PL L+LV+R +R+  DK +  + + +E
Sbjct: 466 EATNLLKMEMFGHMETILYSYQVNHIIKKCGGIPLMLKLVARALRFAKDKEEV-DQVLDE 524

Query: 538 HEKGNGQRFGTRSVDFF 588
            EK  G+ FG   ++ +
Sbjct: 525 LEKLKGEDFGRDKIESY 541


Top