BLASTX nr result
ID: Ephedra28_contig00021488
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00021488
(934 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADE76094.1| unknown [Picea sitchensis] 109 2e-21
ref|XP_006645227.1| PREDICTED: glycine-rich RNA-binding protein ... 101 4e-19
gb|EPS58767.1| hypothetical protein M569_16047 [Genlisea aurea] 100 8e-19
gb|AAL07518.1| RNA-binding protein precursor [Nicotiana tabacum] 100 8e-19
ref|XP_006298696.1| hypothetical protein CARUB_v10014791mg, part... 100 1e-18
gb|ABW70168.1| putative glycine-rich RNA-binding protein 2 [Bamb... 100 1e-18
gb|EOY05157.1| Glycine-rich RNA-binding protein 4 isoform 2 [The... 99 2e-18
gb|EOY05156.1| Glycine-rich RNA-binding protein 4 isoform 1 [The... 99 2e-18
ref|XP_003564921.1| PREDICTED: glycine-rich RNA-binding protein ... 99 2e-18
ref|XP_001769839.1| predicted protein [Physcomitrella patens] gi... 99 2e-18
gb|EMJ28760.1| hypothetical protein PRUPE_ppa013208mg [Prunus pe... 99 3e-18
ref|NP_001236574.1| uncharacterized protein LOC100527220 [Glycin... 99 3e-18
gb|EXB54608.1| Cold-inducible RNA-binding protein [Morus notabilis] 98 4e-18
ref|XP_004232167.1| PREDICTED: uncharacterized protein LOC101261... 98 4e-18
ref|NP_001275314.1| RNA-binding protein precursor [Solanum tuber... 98 4e-18
ref|XP_004249429.1| PREDICTED: cold-inducible RNA-binding protei... 97 7e-18
gb|AAB71417.1| glycine-rich RNA-binding protein PsGRBP [Pisum sa... 97 7e-18
gb|ESW35813.1| hypothetical protein PHAVU_001G267100g [Phaseolus... 97 9e-18
gb|EPS69823.1| hypothetical protein M569_04943 [Genlisea aurea] 97 9e-18
ref|XP_002964561.1| hypothetical protein SELMODRAFT_81392 [Selag... 97 9e-18
>gb|ADE76094.1| unknown [Picea sitchensis]
Length = 150
Score = 109 bits (272), Expect = 2e-21
Identities = 60/121 (49%), Positives = 83/121 (68%), Gaps = 2/121 (1%)
Frame = +3
Query: 138 LTPIFSQISTRINIVRSSTFLQQRRRFSSRLYIGGLSYGTNEEVLKNAFSAYGDILEVEV 317
+TP +++ R+ +V SS + +L++GGLS+ TNE+VL++AFS YG+ILEV V
Sbjct: 14 ITPNTNRLIGRLALVHSSGL-------NKKLFVGGLSFDTNEKVLRDAFSLYGEILEVRV 66
Query: 318 VVNRQTGRSKGFGFVNFANGEDADNAAQEMDGRCLDGRNIQVDVARPTRFVDY--PKAVG 491
++NR +G SKGFGFV FA+ DA NA +EMDG+ LDGRNI+V+ A D PKAV
Sbjct: 67 IINRASGLSKGFGFVQFASETDAVNALKEMDGQSLDGRNIRVNFANTRARQDSAPPKAVV 126
Query: 492 P 494
P
Sbjct: 127 P 127
>ref|XP_006645227.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Oryza brachyantha]
Length = 143
Score = 101 bits (252), Expect = 4e-19
Identities = 44/89 (49%), Positives = 68/89 (76%)
Frame = +3
Query: 186 SSTFLQQRRRFSSRLYIGGLSYGTNEEVLKNAFSAYGDILEVEVVVNRQTGRSKGFGFVN 365
S R S++L++GGLS+GTN++ L++AF+++GD+ E V+ +R+TGRS+GFGFVN
Sbjct: 20 SPAMFNAARLMSTKLFVGGLSWGTNDDSLRDAFTSFGDVTEARVITDRETGRSRGFGFVN 79
Query: 366 FANGEDADNAAQEMDGRCLDGRNIQVDVA 452
F NG++A +A + MDG+ L GRNI+V+ A
Sbjct: 80 FVNGDEAKSAMEAMDGKELGGRNIRVNFA 108
>gb|EPS58767.1| hypothetical protein M569_16047 [Genlisea aurea]
Length = 139
Score = 100 bits (249), Expect = 8e-19
Identities = 57/130 (43%), Positives = 86/130 (66%), Gaps = 2/130 (1%)
Frame = +3
Query: 114 NIKYNIMVLTPIFSQISTRINIV-RSSTFLQQRRRFSSRLYIGGLSYGTNEEVLKNAFSA 290
N+ N+M+ + I S+ + + R+S L R +S+L+IGGLS+ T+E+ L +AFS
Sbjct: 6 NLSRNLMLPSHIPKSNSSLLRLPSRASPILFTCRGIASKLFIGGLSFYTSEQGLSDAFSK 65
Query: 291 YGDILEVEVVVNRQTGRSKGFGFVNFANGEDADNAAQEMDGRCLDGRNIQVDVARP-TRF 467
YG ++E +V +R T RSKGFGFV +A+ ++A+NA EM+G+ L+GR I VD A+P +
Sbjct: 66 YGQVIEATIVTDRATDRSKGFGFVTYASEDEAENAILEMNGKPLNGRVIFVDYAKPRSSS 125
Query: 468 VDYPKAVGPP 497
D P A GPP
Sbjct: 126 RDMPIARGPP 135
>gb|AAL07518.1| RNA-binding protein precursor [Nicotiana tabacum]
Length = 277
Score = 100 bits (249), Expect = 8e-19
Identities = 48/93 (51%), Positives = 67/93 (72%)
Frame = +3
Query: 186 SSTFLQQRRRFSSRLYIGGLSYGTNEEVLKNAFSAYGDILEVEVVVNRQTGRSKGFGFVN 365
+S F R SS+L++GGLSYGT+E LK AFS YGD++E V+++R TGRS+GFGF++
Sbjct: 28 ASLFQAIRSMSSSKLFVGGLSYGTDESSLKEAFSQYGDVIEARVIMDRDTGRSRGFGFIS 87
Query: 366 FANGEDADNAAQEMDGRCLDGRNIQVDVARPTR 464
F + E+A +A Q MDG+ L GR I+V+ A R
Sbjct: 88 FPSSEEAASALQAMDGQDLHGRRIRVNYATEKR 120
>ref|XP_006298696.1| hypothetical protein CARUB_v10014791mg, partial [Capsella rubella]
gi|482567405|gb|EOA31594.1| hypothetical protein
CARUB_v10014791mg, partial [Capsella rubella]
Length = 167
Score = 99.8 bits (247), Expect = 1e-18
Identities = 48/105 (45%), Positives = 80/105 (76%)
Frame = +3
Query: 138 LTPIFSQISTRINIVRSSTFLQQRRRFSSRLYIGGLSYGTNEEVLKNAFSAYGDILEVEV 317
L+ I+ Q ++ + V ++ L R S++L+IGGLS+GT++ LK+AFS++GD+ E V
Sbjct: 39 LSGIWRQGVSQSSNVPVTSMLGSLRYMSTKLFIGGLSWGTDDSSLKDAFSSFGDVTEATV 98
Query: 318 VVNRQTGRSKGFGFVNFANGEDADNAAQEMDGRCLDGRNIQVDVA 452
+ +R+TGRS+GFGFV++ + + A+NA +EMDG+ L+GRNI+V++A
Sbjct: 99 IADRETGRSRGFGFVSYDSEDSANNAIKEMDGKELNGRNIRVNLA 143
>gb|ABW70168.1| putative glycine-rich RNA-binding protein 2 [Bambusa oldhamii]
Length = 162
Score = 99.8 bits (247), Expect = 1e-18
Identities = 42/81 (51%), Positives = 67/81 (82%)
Frame = +3
Query: 210 RRFSSRLYIGGLSYGTNEEVLKNAFSAYGDILEVEVVVNRQTGRSKGFGFVNFANGEDAD 389
R S++L++GGLS+GT+++ LK+AF+++G+++E V+ +R TG+S+GFGFV+F+NG+DA
Sbjct: 33 RLMSTKLFVGGLSWGTDDQSLKDAFTSFGEVVEARVITDRDTGKSRGFGFVSFSNGDDAK 92
Query: 390 NAAQEMDGRCLDGRNIQVDVA 452
NA MDG+ L+GRNI V+ A
Sbjct: 93 NAMSSMDGQELEGRNIHVNFA 113
>gb|EOY05157.1| Glycine-rich RNA-binding protein 4 isoform 2 [Theobroma cacao]
Length = 156
Score = 99.0 bits (245), Expect = 2e-18
Identities = 43/78 (55%), Positives = 61/78 (78%)
Frame = +3
Query: 219 SSRLYIGGLSYGTNEEVLKNAFSAYGDILEVEVVVNRQTGRSKGFGFVNFANGEDADNAA 398
+ +L+IGGLSYGT+++ LK AFS +GD+ E ++++R TGRS+GFGFVNFA+ + A NA
Sbjct: 50 TKKLFIGGLSYGTDDQTLKEAFSGFGDVTEARIIIDRDTGRSRGFGFVNFADDQSASNAL 109
Query: 399 QEMDGRCLDGRNIQVDVA 452
MDG+ L+GRNI+V A
Sbjct: 110 SAMDGQELNGRNIRVSYA 127
>gb|EOY05156.1| Glycine-rich RNA-binding protein 4 isoform 1 [Theobroma cacao]
Length = 139
Score = 99.0 bits (245), Expect = 2e-18
Identities = 43/78 (55%), Positives = 61/78 (78%)
Frame = +3
Query: 219 SSRLYIGGLSYGTNEEVLKNAFSAYGDILEVEVVVNRQTGRSKGFGFVNFANGEDADNAA 398
+ +L+IGGLSYGT+++ LK AFS +GD+ E ++++R TGRS+GFGFVNFA+ + A NA
Sbjct: 33 TKKLFIGGLSYGTDDQTLKEAFSGFGDVTEARIIIDRDTGRSRGFGFVNFADDQSASNAL 92
Query: 399 QEMDGRCLDGRNIQVDVA 452
MDG+ L+GRNI+V A
Sbjct: 93 SAMDGQELNGRNIRVSYA 110
>ref|XP_003564921.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 156
Score = 99.0 bits (245), Expect = 2e-18
Identities = 45/100 (45%), Positives = 70/100 (70%)
Frame = +3
Query: 153 SQISTRINIVRSSTFLQQRRRFSSRLYIGGLSYGTNEEVLKNAFSAYGDILEVEVVVNRQ 332
S ++ ++ + R S++L++GGLS+GTN+ LK AFS++G++ E V+ +R+
Sbjct: 14 SAFASSVSAGSAPAMFNAARFMSNKLFVGGLSWGTNDGSLKEAFSSFGEVYEARVITDRE 73
Query: 333 TGRSKGFGFVNFANGEDADNAAQEMDGRCLDGRNIQVDVA 452
TGRS+GFGFV F+N EDA AA MDG+ LDGR+++V+ A
Sbjct: 74 TGRSRGFGFVEFSNEEDAKKAASSMDGQELDGRSVRVNFA 113
>ref|XP_001769839.1| predicted protein [Physcomitrella patens]
gi|162678948|gb|EDQ65401.1| predicted protein
[Physcomitrella patens]
Length = 133
Score = 99.0 bits (245), Expect = 2e-18
Identities = 46/83 (55%), Positives = 66/83 (79%)
Frame = +3
Query: 204 QRRRFSSRLYIGGLSYGTNEEVLKNAFSAYGDILEVEVVVNRQTGRSKGFGFVNFANGED 383
QR SS+L+IGGL++ T+E L++AFS++G + EV+++++R TGRS+GFGFVNF + E+
Sbjct: 39 QRMMSSSKLFIGGLAWATDENTLRDAFSSFGTVTEVKIILDRDTGRSRGFGFVNFTSPEE 98
Query: 384 ADNAAQEMDGRCLDGRNIQVDVA 452
A+ A QEMDGR L GR I+VD A
Sbjct: 99 AEVALQEMDGRELAGRQIRVDYA 121
>gb|EMJ28760.1| hypothetical protein PRUPE_ppa013208mg [Prunus persica]
Length = 135
Score = 98.6 bits (244), Expect = 3e-18
Identities = 46/88 (52%), Positives = 66/88 (75%)
Frame = +3
Query: 189 STFLQQRRRFSSRLYIGGLSYGTNEEVLKNAFSAYGDILEVEVVVNRQTGRSKGFGFVNF 368
++ L R SS+L+IGGLS+GT++E LK AFS++GD+ E V+++R TG+S+GFGFV+F
Sbjct: 24 ASMLNAARCMSSKLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDF 83
Query: 369 ANGEDADNAAQEMDGRCLDGRNIQVDVA 452
A+ E A +A MDG+ L GRNI+V A
Sbjct: 84 ASDESASSALNAMDGQELHGRNIRVSTA 111
>ref|NP_001236574.1| uncharacterized protein LOC100527220 [Glycine max]
gi|255631812|gb|ACU16273.1| unknown [Glycine max]
Length = 138
Score = 98.6 bits (244), Expect = 3e-18
Identities = 46/98 (46%), Positives = 71/98 (72%)
Frame = +3
Query: 159 ISTRINIVRSSTFLQQRRRFSSRLYIGGLSYGTNEEVLKNAFSAYGDILEVEVVVNRQTG 338
+S+ +N +R + SS+L+IGGLSYG +++ LK+AFS +GD+++ +V+ +R +G
Sbjct: 23 VSSMLNYIRCMS--------SSKLFIGGLSYGVDDQSLKDAFSGFGDVVDAKVITDRDSG 74
Query: 339 RSKGFGFVNFANGEDADNAAQEMDGRCLDGRNIQVDVA 452
RS+GFGFVNF+N E A +A MDG+ LDGR+I+V A
Sbjct: 75 RSRGFGFVNFSNDESASSALSAMDGKDLDGRSIRVSYA 112
>gb|EXB54608.1| Cold-inducible RNA-binding protein [Morus notabilis]
Length = 134
Score = 98.2 bits (243), Expect = 4e-18
Identities = 51/102 (50%), Positives = 72/102 (70%), Gaps = 2/102 (1%)
Frame = +3
Query: 198 LQQRRRFSSRLYIGGLSYGTNEEVLKNAFSAYGDILEVEVVVNRQTGRSKGFGFVNFANG 377
L RR +S+L++GGLS+ TNE L AFS YG ++E ++V+N+ + +SKGFGFV FA+
Sbjct: 27 LISRRGIASKLFVGGLSFSTNETALTEAFSQYGQVVEAKIVMNKVSDKSKGFGFVTFASV 86
Query: 378 EDADNAAQEMDGRCLDGRNIQVDVARP-TRFVD-YPKAVGPP 497
++A NA EM+G+ L+GR I VD A+P T F + P A GPP
Sbjct: 87 DEAHNALTEMNGKALNGRVIFVDYAKPKTDFSEAVPIARGPP 128
>ref|XP_004232167.1| PREDICTED: uncharacterized protein LOC101261381 [Solanum
lycopersicum]
Length = 333
Score = 98.2 bits (243), Expect = 4e-18
Identities = 46/92 (50%), Positives = 66/92 (71%)
Frame = +3
Query: 189 STFLQQRRRFSSRLYIGGLSYGTNEEVLKNAFSAYGDILEVEVVVNRQTGRSKGFGFVNF 368
S F R SS+L++GGLSYGT+E LK FS YG+++E V+++R+TGRS+GFGF++F
Sbjct: 29 SLFQTIRSMSSSKLFVGGLSYGTDESSLKETFSQYGEVIEARVILDRETGRSRGFGFISF 88
Query: 369 ANGEDADNAAQEMDGRCLDGRNIQVDVARPTR 464
+ E+A +A Q MDG+ L GR I+V+ A R
Sbjct: 89 PSSEEATSAMQAMDGQDLHGRRIKVNYATEKR 120
>ref|NP_001275314.1| RNA-binding protein precursor [Solanum tuberosum]
gi|15822705|gb|AAL07519.1| RNA-binding protein precursor
[Solanum tuberosum]
Length = 339
Score = 98.2 bits (243), Expect = 4e-18
Identities = 46/92 (50%), Positives = 66/92 (71%)
Frame = +3
Query: 189 STFLQQRRRFSSRLYIGGLSYGTNEEVLKNAFSAYGDILEVEVVVNRQTGRSKGFGFVNF 368
S F R SS+L++GGLSYGT+E LK FS YG+++E V+++R+TGRS+GFGF++F
Sbjct: 29 SLFQTIRSMSSSKLFVGGLSYGTDESSLKETFSQYGEVIEARVILDRETGRSRGFGFISF 88
Query: 369 ANGEDADNAAQEMDGRCLDGRNIQVDVARPTR 464
+ E+A +A Q MDG+ L GR I+V+ A R
Sbjct: 89 PSSEEATSAMQAMDGQDLHGRRIKVNYATEKR 120
>ref|XP_004249429.1| PREDICTED: cold-inducible RNA-binding protein-like isoform 1
[Solanum lycopersicum]
Length = 129
Score = 97.4 bits (241), Expect = 7e-18
Identities = 48/108 (44%), Positives = 74/108 (68%), Gaps = 1/108 (0%)
Frame = +3
Query: 177 IVRSSTFLQQRRRFSSRLYIGGLSYGTNEEVLKNAFSAYGDILEVEVVVNRQTGRSKGFG 356
++ +ST RR +S+L++GGLS+ T E+ L AFS +G ++E ++V +R + RSKGFG
Sbjct: 16 VISNSTIFLSRRGIASKLFVGGLSFYTTEKALSEAFSQHGQVIEAKIVTDRVSDRSKGFG 75
Query: 357 FVNFANGEDADNAAQEMDGRCLDGRNIQVDVARP-TRFVDYPKAVGPP 497
FV +A+ ++A+ A QEM+G+ L+GR + VD A+P T P A GPP
Sbjct: 76 FVTYASEDEAEKALQEMNGKPLNGRVVFVDYAKPKTDGGSTPIARGPP 123
>gb|AAB71417.1| glycine-rich RNA-binding protein PsGRBP [Pisum sativum]
gi|206586422|gb|ACI15745.1| glycine-rich RNA-binding
protein [Pisum sativum]
Length = 146
Score = 97.4 bits (241), Expect = 7e-18
Identities = 46/89 (51%), Positives = 65/89 (73%)
Frame = +3
Query: 186 SSTFLQQRRRFSSRLYIGGLSYGTNEEVLKNAFSAYGDILEVEVVVNRQTGRSKGFGFVN 365
SS R SS+L+IGGLSYG +++ LK+AF++YG+++E V+ +R TGRS+GFGFVN
Sbjct: 24 SSMLNYLRHMSSSKLFIGGLSYGVDDQSLKDAFASYGEVVEARVITDRDTGRSRGFGFVN 83
Query: 366 FANGEDADNAAQEMDGRCLDGRNIQVDVA 452
F + E A +A MDG+ L+GRNI+V A
Sbjct: 84 FTSDESATSALSAMDGQDLNGRNIRVSYA 112
>gb|ESW35813.1| hypothetical protein PHAVU_001G267100g [Phaseolus vulgaris]
Length = 135
Score = 97.1 bits (240), Expect = 9e-18
Identities = 45/98 (45%), Positives = 70/98 (71%)
Frame = +3
Query: 159 ISTRINIVRSSTFLQQRRRFSSRLYIGGLSYGTNEEVLKNAFSAYGDILEVEVVVNRQTG 338
+S+ +N +R + SS+L++GGLSYG +++ L++AF+ YGD++E V+ +R TG
Sbjct: 23 VSSMLNYIRCMS--------SSKLFVGGLSYGVDDQSLRDAFAGYGDVVEARVITDRDTG 74
Query: 339 RSKGFGFVNFANGEDADNAAQEMDGRCLDGRNIQVDVA 452
RS+GFGFVNF++ E A +A MDG+ L+GRNI+V A
Sbjct: 75 RSRGFGFVNFSSDESATSALSAMDGQDLNGRNIRVSYA 112
>gb|EPS69823.1| hypothetical protein M569_04943 [Genlisea aurea]
Length = 127
Score = 97.1 bits (240), Expect = 9e-18
Identities = 43/88 (48%), Positives = 65/88 (73%)
Frame = +3
Query: 189 STFLQQRRRFSSRLYIGGLSYGTNEEVLKNAFSAYGDILEVEVVVNRQTGRSKGFGFVNF 368
S R S++L+IGGLSYGT+++ L++AFS++GD+ + V+ +R +GRS+GFGFVNF
Sbjct: 20 SLMFMTARSMSTKLFIGGLSYGTDDQTLRDAFSSFGDVTDARVITDRDSGRSRGFGFVNF 79
Query: 369 ANGEDADNAAQEMDGRCLDGRNIQVDVA 452
++ E A +A MDG+ L+GRNI+V A
Sbjct: 80 SSDESASSALSAMDGQQLNGRNIRVSYA 107
>ref|XP_002964561.1| hypothetical protein SELMODRAFT_81392 [Selaginella moellendorffii]
gi|302814304|ref|XP_002988836.1| hypothetical protein
SELMODRAFT_128832 [Selaginella moellendorffii]
gi|300143407|gb|EFJ10098.1| hypothetical protein
SELMODRAFT_128832 [Selaginella moellendorffii]
gi|300168290|gb|EFJ34894.1| hypothetical protein
SELMODRAFT_81392 [Selaginella moellendorffii]
Length = 149
Score = 97.1 bits (240), Expect = 9e-18
Identities = 44/81 (54%), Positives = 64/81 (79%)
Frame = +3
Query: 210 RRFSSRLYIGGLSYGTNEEVLKNAFSAYGDILEVEVVVNRQTGRSKGFGFVNFANGEDAD 389
R FSS+L+IGGL++GT E L++AFS +G+I+EV V+ +R+TGRS+GFGFV++ ++A
Sbjct: 33 RGFSSKLFIGGLAWGTEERGLRDAFSPFGEIIEVRVIQDRETGRSRGFGFVSYITDQEAQ 92
Query: 390 NAAQEMDGRCLDGRNIQVDVA 452
A + MDGR LDGR I+V+ A
Sbjct: 93 KAMEAMDGRVLDGRTIRVNYA 113