BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00021339
         (834 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274318.1| PREDICTED: pentatricopeptide repeat-containi...   111   4e-22
gb|EMJ19937.1| hypothetical protein PRUPE_ppa009149mg [Prunus pe...   107   4e-21
ref|XP_006644734.1| PREDICTED: pentatricopeptide repeat-containi...   107   5e-21
gb|EOY23346.1| Pentatricopeptide repeat (PPR) superfamily protei...   107   5e-21
gb|EOY23345.1| Pentatricopeptide repeat (PPR) superfamily protei...   107   5e-21
ref|XP_006836534.1| hypothetical protein AMTR_s00131p00023460 [A...   106   9e-21
ref|XP_004970013.1| PREDICTED: pentatricopeptide repeat-containi...   106   9e-21
ref|XP_004970012.1| PREDICTED: pentatricopeptide repeat-containi...   106   9e-21
ref|XP_004970011.1| PREDICTED: pentatricopeptide repeat-containi...   106   9e-21
ref|XP_004970010.1| PREDICTED: pentatricopeptide repeat-containi...   106   9e-21
gb|EMT22081.1| hypothetical protein F775_05575 [Aegilops tauschii]    105   2e-20
ref|XP_004157218.1| PREDICTED: pentatricopeptide repeat-containi...   105   2e-20
ref|XP_004140747.1| PREDICTED: pentatricopeptide repeat-containi...   105   2e-20
ref|XP_004234195.1| PREDICTED: pentatricopeptide repeat-containi...   105   3e-20
ref|XP_002513638.1| pentatricopeptide repeat-containing protein,...   104   3e-20
gb|EEC71511.1| hypothetical protein OsI_03797 [Oryza sativa Indi...   104   3e-20
ref|XP_006362659.1| PREDICTED: pentatricopeptide repeat-containi...   103   6e-20
ref|NP_001140314.1| uncharacterized protein LOC100272359 [Zea ma...   103   8e-20
gb|EEE55404.1| hypothetical protein OsJ_03510 [Oryza sativa Japo...   103   1e-19
ref|XP_006422051.1| hypothetical protein CICLE_v10005483mg [Citr...   102   1e-19

>ref|XP_002274318.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21190
           [Vitis vinifera] gi|302143769|emb|CBI22630.3| unnamed
           protein product [Vitis vinifera]
          Length = 295

 Score =  111 bits (277), Expect = 4e-22
 Identities = 52/103 (50%), Positives = 74/103 (71%)
 Frame = -3

Query: 832 RILSKNLENTPRVLFTRVISMYERANNLEKMLEVFADMDELQVKPDYATVLKISEVFKKL 653
           ++ S+NLE+ PRV + ++IS+Y R +  EKM E+FADM+EL ++P+ + V  + +VF+KL
Sbjct: 148 KLFSENLESLPRVFYDKMISIYYRRDMHEKMFEIFADMEELGIRPNTSIVKMVGDVFQKL 207

Query: 652 GEQNKYEKMLQKYPKPKWEYRYIKGKRVKRRLSLPDIGKDQVE 524
           G  +KYEK+ +KYP PKWEYRYIKGKRV+ R  L     D  E
Sbjct: 208 GMLDKYEKLQKKYPPPKWEYRYIKGKRVRIRAKLTGESDDPGE 250


>gb|EMJ19937.1| hypothetical protein PRUPE_ppa009149mg [Prunus persica]
          Length = 305

 Score =  107 bits (268), Expect = 4e-21
 Identities = 50/102 (49%), Positives = 74/102 (72%)
 Frame = -3

Query: 832 RILSKNLENTPRVLFTRVISMYERANNLEKMLEVFADMDELQVKPDYATVLKISEVFKKL 653
           ++ S+ LE+ PR+ F ++IS+Y R    +KM E+FADM+EL V+P+ + V K+  VF++L
Sbjct: 148 KLFSQYLESMPRMFFDKMISIYYRHGIHDKMFEIFADMEELGVQPNVSIVTKVGNVFQEL 207

Query: 652 GEQNKYEKMLQKYPKPKWEYRYIKGKRVKRRLSLPDIGKDQV 527
           G  +KY K+ QKYP PKWEYRYIKGKRVK R +  + G +++
Sbjct: 208 GMLDKYHKLKQKYPPPKWEYRYIKGKRVKIRANYENDGAEKM 249


>ref|XP_006644734.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21190-like [Oryza brachyantha]
          Length = 295

 Score =  107 bits (267), Expect = 5e-21
 Identities = 47/92 (51%), Positives = 68/92 (73%)
 Frame = -3

Query: 832 RILSKNLENTPRVLFTRVISMYERANNLEKMLEVFADMDELQVKPDYATVLKISEVFKKL 653
           +I S+ LE  PR  F R+IS+Y R  + +KM E+FADM+EL V+PD + +  + +VF+KL
Sbjct: 150 KIFSRYLEGLPRTFFMRMISLYYRLESYQKMFEIFADMEELGVRPDGSIIRMLGDVFQKL 209

Query: 652 GEQNKYEKMLQKYPKPKWEYRYIKGKRVKRRL 557
           G  +KY K+ +KYP PKWEYRYIKGKR++ ++
Sbjct: 210 GMMDKYVKLKKKYPPPKWEYRYIKGKRIRLKV 241


>gb|EOY23346.1| Pentatricopeptide repeat (PPR) superfamily protein isoform 2
           [Theobroma cacao]
          Length = 238

 Score =  107 bits (267), Expect = 5e-21
 Identities = 49/89 (55%), Positives = 66/89 (74%)
 Frame = -3

Query: 832 RILSKNLENTPRVLFTRVISMYERANNLEKMLEVFADMDELQVKPDYATVLKISEVFKKL 653
           ++ S NLE+TPR+ F ++IS+Y      +KM EVFADM+EL VKP  + V  +  VF++L
Sbjct: 122 KLFSDNLESTPRIFFDKMISIYYHKGMHDKMFEVFADMEELGVKPSVSVVSMVGNVFQQL 181

Query: 652 GEQNKYEKMLQKYPKPKWEYRYIKGKRVK 566
           G  +KY+K+ +KYP PKWEYRYIKGKRVK
Sbjct: 182 GMLDKYDKLNKKYPPPKWEYRYIKGKRVK 210


>gb|EOY23345.1| Pentatricopeptide repeat (PPR) superfamily protein isoform 1
           [Theobroma cacao]
          Length = 258

 Score =  107 bits (267), Expect = 5e-21
 Identities = 49/89 (55%), Positives = 66/89 (74%)
 Frame = -3

Query: 832 RILSKNLENTPRVLFTRVISMYERANNLEKMLEVFADMDELQVKPDYATVLKISEVFKKL 653
           ++ S NLE+TPR+ F ++IS+Y      +KM EVFADM+EL VKP  + V  +  VF++L
Sbjct: 142 KLFSDNLESTPRIFFDKMISIYYHKGMHDKMFEVFADMEELGVKPSVSVVSMVGNVFQQL 201

Query: 652 GEQNKYEKMLQKYPKPKWEYRYIKGKRVK 566
           G  +KY+K+ +KYP PKWEYRYIKGKRVK
Sbjct: 202 GMLDKYDKLNKKYPPPKWEYRYIKGKRVK 230


>ref|XP_006836534.1| hypothetical protein AMTR_s00131p00023460 [Amborella trichopoda]
           gi|548839073|gb|ERM99387.1| hypothetical protein
           AMTR_s00131p00023460 [Amborella trichopoda]
          Length = 317

 Score =  106 bits (265), Expect = 9e-21
 Identities = 54/103 (52%), Positives = 73/103 (70%), Gaps = 1/103 (0%)
 Frame = -3

Query: 832 RILSKNLENTPRVLFTRVISMYERANNLEKMLEVFADMDELQVKPDYATVLKISEVFKKL 653
           +I S+NLE  PR+ F  +IS+Y + N  +KM EVFADM+EL VKP+ A V+ + + F+KL
Sbjct: 139 KIFSENLEGLPRIFFHLIISVYYKNNMHDKMFEVFADMEELGVKPNNAIVVMVGDEFQKL 198

Query: 652 GEQNKYEKMLQKYPKPKWEYRYIKGKRVK-RRLSLPDIGKDQV 527
           G  +KY+K+ +KYP  KWEYRYIKGKRVK    +L   G+D V
Sbjct: 199 GMLDKYKKLKKKYPPLKWEYRYIKGKRVKILSKNLSQFGEDGV 241


>ref|XP_004970013.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21190-like isoform X4 [Setaria italica]
          Length = 313

 Score =  106 bits (265), Expect = 9e-21
 Identities = 51/103 (49%), Positives = 69/103 (66%)
 Frame = -3

Query: 829 ILSKNLENTPRVLFTRVISMYERANNLEKMLEVFADMDELQVKPDYATVLKISEVFKKLG 650
           I S+ +E  PR  F R+IS+Y       KM EVFADM+EL V+PD + V  + +VF+KL 
Sbjct: 154 IFSRYMEGLPRTFFMRMISLYYSVGAYNKMFEVFADMEELGVRPDGSIVRMLGDVFQKLD 213

Query: 649 EQNKYEKMLQKYPKPKWEYRYIKGKRVKRRLSLPDIGKDQVEG 521
             +KYEK+ +KYP PKWEYRYIKGKR+K ++   +  K+  EG
Sbjct: 214 MMDKYEKLKKKYPPPKWEYRYIKGKRIKMKVYPDNKTKELTEG 256


>ref|XP_004970012.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21190-like isoform X3 [Setaria italica]
          Length = 250

 Score =  106 bits (265), Expect = 9e-21
 Identities = 51/103 (49%), Positives = 69/103 (66%)
 Frame = -3

Query: 829 ILSKNLENTPRVLFTRVISMYERANNLEKMLEVFADMDELQVKPDYATVLKISEVFKKLG 650
           I S+ +E  PR  F R+IS+Y       KM EVFADM+EL V+PD + V  + +VF+KL 
Sbjct: 91  IFSRYMEGLPRTFFMRMISLYYSVGAYNKMFEVFADMEELGVRPDGSIVRMLGDVFQKLD 150

Query: 649 EQNKYEKMLQKYPKPKWEYRYIKGKRVKRRLSLPDIGKDQVEG 521
             +KYEK+ +KYP PKWEYRYIKGKR+K ++   +  K+  EG
Sbjct: 151 MMDKYEKLKKKYPPPKWEYRYIKGKRIKMKVYPDNKTKELTEG 193


>ref|XP_004970011.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21190-like isoform X2 [Setaria italica]
          Length = 299

 Score =  106 bits (265), Expect = 9e-21
 Identities = 51/103 (49%), Positives = 69/103 (66%)
 Frame = -3

Query: 829 ILSKNLENTPRVLFTRVISMYERANNLEKMLEVFADMDELQVKPDYATVLKISEVFKKLG 650
           I S+ +E  PR  F R+IS+Y       KM EVFADM+EL V+PD + V  + +VF+KL 
Sbjct: 154 IFSRYMEGLPRTFFMRMISLYYSVGAYNKMFEVFADMEELGVRPDGSIVRMLGDVFQKLD 213

Query: 649 EQNKYEKMLQKYPKPKWEYRYIKGKRVKRRLSLPDIGKDQVEG 521
             +KYEK+ +KYP PKWEYRYIKGKR+K ++   +  K+  EG
Sbjct: 214 MMDKYEKLKKKYPPPKWEYRYIKGKRIKMKVYPDNKTKELTEG 256


>ref|XP_004970010.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21190-like isoform X1 [Setaria italica]
          Length = 311

 Score =  106 bits (265), Expect = 9e-21
 Identities = 51/103 (49%), Positives = 69/103 (66%)
 Frame = -3

Query: 829 ILSKNLENTPRVLFTRVISMYERANNLEKMLEVFADMDELQVKPDYATVLKISEVFKKLG 650
           I S+ +E  PR  F R+IS+Y       KM EVFADM+EL V+PD + V  + +VF+KL 
Sbjct: 152 IFSRYMEGLPRTFFMRMISLYYSVGAYNKMFEVFADMEELGVRPDGSIVRMLGDVFQKLD 211

Query: 649 EQNKYEKMLQKYPKPKWEYRYIKGKRVKRRLSLPDIGKDQVEG 521
             +KYEK+ +KYP PKWEYRYIKGKR+K ++   +  K+  EG
Sbjct: 212 MMDKYEKLKKKYPPPKWEYRYIKGKRIKMKVYPDNKTKELTEG 254


>gb|EMT22081.1| hypothetical protein F775_05575 [Aegilops tauschii]
          Length = 289

 Score =  105 bits (263), Expect = 2e-20
 Identities = 51/102 (50%), Positives = 73/102 (71%)
 Frame = -3

Query: 832 RILSKNLENTPRVLFTRVISMYERANNLEKMLEVFADMDELQVKPDYATVLKISEVFKKL 653
           +I S+ +E  PR+ F ++IS+Y R  + EKM EVFADM+EL V+PD + V  + +VF KL
Sbjct: 143 KIFSRYMEGLPRIFFMKIISLYYRLGSYEKMFEVFADMEELGVRPDTSIVRMLGDVFMKL 202

Query: 652 GEQNKYEKMLQKYPKPKWEYRYIKGKRVKRRLSLPDIGKDQV 527
              +KYEK+ +KYP PK+EYRYIKGKR++ R+  PD   ++V
Sbjct: 203 EMLDKYEKLNRKYPPPKFEYRYIKGKRIRIRV-YPDNSTEEV 243


>ref|XP_004157218.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21190-like [Cucumis sativus]
          Length = 258

 Score =  105 bits (263), Expect = 2e-20
 Identities = 48/91 (52%), Positives = 70/91 (76%)
 Frame = -3

Query: 832 RILSKNLENTPRVLFTRVISMYERANNLEKMLEVFADMDELQVKPDYATVLKISEVFKKL 653
           ++ S++LE+ PR+ F ++IS+Y      +K+ EVFADM+EL V+P+ A V K+  VF++L
Sbjct: 93  KLFSQHLESIPRIFFHKMISLYYDQAMHDKLFEVFADMEELGVQPNMAIVTKVGNVFQEL 152

Query: 652 GEQNKYEKMLQKYPKPKWEYRYIKGKRVKRR 560
           G  +KY+K+++KYP PKWEYRYIKGKRVK R
Sbjct: 153 GMLDKYKKLMKKYPPPKWEYRYIKGKRVKIR 183


>ref|XP_004140747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21190-like [Cucumis sativus]
          Length = 331

 Score =  105 bits (263), Expect = 2e-20
 Identities = 48/91 (52%), Positives = 70/91 (76%)
 Frame = -3

Query: 832 RILSKNLENTPRVLFTRVISMYERANNLEKMLEVFADMDELQVKPDYATVLKISEVFKKL 653
           ++ S++LE+ PR+ F ++IS+Y      +K+ EVFADM+EL V+P+ A V K+  VF++L
Sbjct: 166 KLFSQHLESIPRIFFHKMISLYYDQAMHDKLFEVFADMEELGVQPNMAIVTKVGNVFQEL 225

Query: 652 GEQNKYEKMLQKYPKPKWEYRYIKGKRVKRR 560
           G  +KY+K+++KYP PKWEYRYIKGKRVK R
Sbjct: 226 GMLDKYKKLMKKYPPPKWEYRYIKGKRVKIR 256


>ref|XP_004234195.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21190-like [Solanum lycopersicum]
          Length = 305

 Score =  105 bits (261), Expect = 3e-20
 Identities = 47/91 (51%), Positives = 66/91 (72%)
 Frame = -3

Query: 832 RILSKNLENTPRVLFTRVISMYERANNLEKMLEVFADMDELQVKPDYATVLKISEVFKKL 653
           ++ S+NLE+ PR+ F ++I++Y      EKM E+FADM+EL ++P    V  +  VF+KL
Sbjct: 150 KLFSQNLESMPRIFFQKMIAIYYHKEMNEKMFEIFADMEELGIRPTVPVVKMVGNVFQKL 209

Query: 652 GEQNKYEKMLQKYPKPKWEYRYIKGKRVKRR 560
           G  +KY+K+ +KYP PKWEYRYIKGKRVK R
Sbjct: 210 GMLDKYQKLNKKYPPPKWEYRYIKGKRVKIR 240


>ref|XP_002513638.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547546|gb|EEF49041.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 359

 Score =  104 bits (260), Expect = 3e-20
 Identities = 49/91 (53%), Positives = 65/91 (71%)
 Frame = -3

Query: 832 RILSKNLENTPRVLFTRVISMYERANNLEKMLEVFADMDELQVKPDYATVLKISEVFKKL 653
           ++ S NLE TPR  F ++IS+Y +    EKM E+FADM+EL V+P  + V  +  VF+KL
Sbjct: 181 KLFSDNLEGTPRNFFDKMISIYYKREMHEKMFEIFADMEELGVRPSVSIVNMMGSVFQKL 240

Query: 652 GEQNKYEKMLQKYPKPKWEYRYIKGKRVKRR 560
           G  +KY K+ +KYP PKWEYRYIKGKRV+ R
Sbjct: 241 GMLDKYRKLKKKYPPPKWEYRYIKGKRVRLR 271


>gb|EEC71511.1| hypothetical protein OsI_03797 [Oryza sativa Indica Group]
          Length = 295

 Score =  104 bits (260), Expect = 3e-20
 Identities = 49/103 (47%), Positives = 72/103 (69%)
 Frame = -3

Query: 832 RILSKNLENTPRVLFTRVISMYERANNLEKMLEVFADMDELQVKPDYATVLKISEVFKKL 653
           +  S+ LE  PR  F R+IS+Y R  + +KM E+FADM+EL V+PD + +  + EVF+KL
Sbjct: 150 KTFSRYLEGLPRTFFMRMISLYYRLESYQKMFEIFADMEELGVRPDGSIIRMLGEVFQKL 209

Query: 652 GEQNKYEKMLQKYPKPKWEYRYIKGKRVKRRLSLPDIGKDQVE 524
           G  +KY K+ +KYP PKWEYR+IKGKR++ ++      KD++E
Sbjct: 210 GMLDKYVKLKKKYPPPKWEYRHIKGKRIRVKV----YPKDEIE 248


>ref|XP_006362659.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21190-like [Solanum tuberosum]
          Length = 308

 Score =  103 bits (258), Expect = 6e-20
 Identities = 49/101 (48%), Positives = 69/101 (68%)
 Frame = -3

Query: 832 RILSKNLENTPRVLFTRVISMYERANNLEKMLEVFADMDELQVKPDYATVLKISEVFKKL 653
           ++ S+NLE+ PR+ F ++I++Y      EKM E+FADM+EL ++P    V  +  VF+KL
Sbjct: 150 KLFSQNLESMPRIFFQKMIAIYYHKEMNEKMFEIFADMEELGIRPTVPVVTMVGNVFQKL 209

Query: 652 GEQNKYEKMLQKYPKPKWEYRYIKGKRVKRRLSLPDIGKDQ 530
              +KY+K+ +KYP PKWEYRYIKGKRVK R    D+ K Q
Sbjct: 210 EMLDKYQKLKKKYPPPKWEYRYIKGKRVKIRTK--DLDKSQ 248


>ref|NP_001140314.1| uncharacterized protein LOC100272359 [Zea mays]
           gi|194698952|gb|ACF83560.1| unknown [Zea mays]
           gi|224032859|gb|ACN35505.1| unknown [Zea mays]
           gi|414880433|tpg|DAA57564.1| TPA: hypothetical protein
           ZEAMMB73_276663 [Zea mays] gi|414880434|tpg|DAA57565.1|
           TPA: hypothetical protein ZEAMMB73_276663 [Zea mays]
           gi|414880435|tpg|DAA57566.1| TPA: hypothetical protein
           ZEAMMB73_276663 [Zea mays]
          Length = 296

 Score =  103 bits (257), Expect = 8e-20
 Identities = 45/91 (49%), Positives = 65/91 (71%)
 Frame = -3

Query: 829 ILSKNLENTPRVLFTRVISMYERANNLEKMLEVFADMDELQVKPDYATVLKISEVFKKLG 650
           + S+ +E  PR  F R+IS Y  A   +KM E+FADM+EL V+PD + +  + +VF+K+ 
Sbjct: 151 VFSRYMEGLPRTFFMRIISFYYSAGEHDKMFEIFADMEELGVRPDGSIIRMLGDVFQKIE 210

Query: 649 EQNKYEKMLQKYPKPKWEYRYIKGKRVKRRL 557
             +KYEK+ +KYP PKWEYRYIKGKR++ R+
Sbjct: 211 MMDKYEKLKKKYPPPKWEYRYIKGKRIRIRV 241


>gb|EEE55404.1| hypothetical protein OsJ_03510 [Oryza sativa Japonica Group]
          Length = 295

 Score =  103 bits (256), Expect = 1e-19
 Identities = 49/103 (47%), Positives = 71/103 (68%)
 Frame = -3

Query: 832 RILSKNLENTPRVLFTRVISMYERANNLEKMLEVFADMDELQVKPDYATVLKISEVFKKL 653
           +I S+ LE  P   F R+IS+Y R  + +KM E+FADM+EL V+PD + +  + EVF+KL
Sbjct: 150 KIFSRYLEGLPHTFFMRMISLYYRLESYQKMFEIFADMEELGVRPDGSIIRMLGEVFQKL 209

Query: 652 GEQNKYEKMLQKYPKPKWEYRYIKGKRVKRRLSLPDIGKDQVE 524
           G  +KY K+ +KYP PKWEYR IKGKR++ ++      KD++E
Sbjct: 210 GMLDKYVKLKKKYPPPKWEYRRIKGKRIRVKV----YPKDEIE 248


>ref|XP_006422051.1| hypothetical protein CICLE_v10005483mg [Citrus clementina]
           gi|568875045|ref|XP_006490621.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g21190-like [Citrus sinensis]
           gi|557523924|gb|ESR35291.1| hypothetical protein
           CICLE_v10005483mg [Citrus clementina]
          Length = 310

 Score =  102 bits (255), Expect = 1e-19
 Identities = 47/89 (52%), Positives = 64/89 (71%)
 Frame = -3

Query: 832 RILSKNLENTPRVLFTRVISMYERANNLEKMLEVFADMDELQVKPDYATVLKISEVFKKL 653
           +I   +LE TPR+ F ++IS+Y      EKM E+FADM+EL V+P+ + V  +   F+KL
Sbjct: 148 KIFLDHLEGTPRIFFDKMISIYYNRGMHEKMFEIFADMEELGVRPNVSIVSMMGNAFQKL 207

Query: 652 GEQNKYEKMLQKYPKPKWEYRYIKGKRVK 566
           G  +KYEK+ +KYP PKWEYRYIKGKRV+
Sbjct: 208 GMLDKYEKLKKKYPPPKWEYRYIKGKRVR 236