BLASTX nr result

ID: Ephedra28_contig00021331 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00021331
         (564 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525658.1| Rotenone-insensitive NADH-ubiquinone oxidore...    57   2e-06
ref|XP_003544888.1| PREDICTED: internal alternative NAD(P)H-ubiq...    57   3e-06
ref|XP_002881079.1| NDA2 H dehydrogenase 2 [Arabidopsis lyrata s...    55   9e-06
ref|XP_006379050.1| hypothetical protein POPTR_0009s05180g [Popu...    55   9e-06

>ref|XP_002525658.1| Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial
           precursor, putative [Ricinus communis]
           gi|223535094|gb|EEF36776.1| Rotenone-insensitive
           NADH-ubiquinone oxidoreductase, mitochondrial precursor,
           putative [Ricinus communis]
          Length = 472

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 24/34 (70%), Positives = 28/34 (82%)
 Frame = -3

Query: 103 PYYAGLEPTQAGNKARIVVLGSGWAGCRVMKSLD 2
           P YAGL PT+ G K R+VVLGSGWAGCR+MK +D
Sbjct: 48  PQYAGLPPTKPGEKPRLVVLGSGWAGCRLMKGID 81


>ref|XP_003544888.1| PREDICTED: internal alternative NAD(P)H-ubiquinone oxidoreductase
           A1, mitochondrial-like [Glycine max]
          Length = 485

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 25/32 (78%), Positives = 28/32 (87%)
 Frame = -3

Query: 97  YAGLEPTQAGNKARIVVLGSGWAGCRVMKSLD 2
           +AGLEPTQA  K R+VVLGSGWAGCR+MK LD
Sbjct: 37  HAGLEPTQAHEKPRVVVLGSGWAGCRLMKGLD 68


>ref|XP_002881079.1| NDA2 H dehydrogenase 2 [Arabidopsis lyrata subsp. lyrata]
           gi|297326918|gb|EFH57338.1| NDA2 H dehydrogenase 2
           [Arabidopsis lyrata subsp. lyrata]
          Length = 504

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 23/32 (71%), Positives = 27/32 (84%)
 Frame = -3

Query: 97  YAGLEPTQAGNKARIVVLGSGWAGCRVMKSLD 2
           YAGL PT+ G K R+VVLGSGWAGCR+MK +D
Sbjct: 56  YAGLAPTREGEKPRVVVLGSGWAGCRLMKGID 87


>ref|XP_006379050.1| hypothetical protein POPTR_0009s05180g [Populus trichocarpa]
           gi|566186388|ref|XP_002313376.2| pyridine
           nucleotide-disulfide oxidoreductase family protein
           [Populus trichocarpa] gi|118488127|gb|ABK95883.1|
           unknown [Populus trichocarpa]
           gi|550331066|gb|ERP56847.1| hypothetical protein
           POPTR_0009s05180g [Populus trichocarpa]
           gi|550331067|gb|EEE87331.2| pyridine
           nucleotide-disulfide oxidoreductase family protein
           [Populus trichocarpa]
          Length = 488

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 23/32 (71%), Positives = 27/32 (84%)
 Frame = -3

Query: 97  YAGLEPTQAGNKARIVVLGSGWAGCRVMKSLD 2
           YAGLEPT+   K R+VVLGSGWAGCR+MK +D
Sbjct: 40  YAGLEPTKGDEKPRVVVLGSGWAGCRLMKGID 71


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