BLASTX nr result

ID: Ephedra28_contig00021317 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00021317
         (364 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511324.1| leucine-rich repeat-containing protein, puta...    59   5e-07
ref|XP_006296704.1| hypothetical protein CARUB_v10013520mg [Caps...    57   3e-06
ref|XP_002318047.2| hypothetical protein POPTR_0012s08760g [Popu...    55   7e-06

>ref|XP_002511324.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
           gi|223550439|gb|EEF51926.1| leucine-rich
           repeat-containing protein, putative [Ricinus communis]
          Length = 519

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 28/49 (57%), Positives = 39/49 (79%)
 Frame = +1

Query: 217 AERAKAISEVSQIRDVLSSLGYKPDHESVDAARVSLSQIESKLSEELDE 363
           A   +AIS+VSQ R VL +LG +PDHE+VD AR+ L++IES LS++L+E
Sbjct: 67  ASMTRAISDVSQTRSVLQTLGPRPDHETVDNARIKLAEIESDLSKQLEE 115


>ref|XP_006296704.1| hypothetical protein CARUB_v10013520mg [Capsella rubella]
           gi|482565413|gb|EOA29602.1| hypothetical protein
           CARUB_v10013520mg [Capsella rubella]
          Length = 498

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 27/49 (55%), Positives = 36/49 (73%)
 Frame = +1

Query: 217 AERAKAISEVSQIRDVLSSLGYKPDHESVDAARVSLSQIESKLSEELDE 363
           A    AIS+V++ R +L +LG +PDHESVD ARV LS+IES LSE  ++
Sbjct: 64  ASMTSAISDVAETRSILRTLGPRPDHESVDKARVKLSEIESSLSESFED 112


>ref|XP_002318047.2| hypothetical protein POPTR_0012s08760g [Populus trichocarpa]
           gi|550326685|gb|EEE96267.2| hypothetical protein
           POPTR_0012s08760g [Populus trichocarpa]
          Length = 510

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 23/45 (51%), Positives = 38/45 (84%)
 Frame = +1

Query: 229 KAISEVSQIRDVLSSLGYKPDHESVDAARVSLSQIESKLSEELDE 363
           +A+ +V+Q R +L +LG +PDHE+VDAA++ +S+IES LS+EL++
Sbjct: 61  RAVGDVAQTRSILQTLGPRPDHETVDAAKLKVSEIESNLSKELED 105


Top