BLASTX nr result

ID: Ephedra28_contig00021259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00021259
         (1582 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006481216.1| PREDICTED: F-box/LRR-repeat protein At4g1410...    65   8e-08
ref|XP_006429610.1| hypothetical protein CICLE_v10013738mg [Citr...    65   8e-08

>ref|XP_006481216.1| PREDICTED: F-box/LRR-repeat protein At4g14103-like isoform X2
           [Citrus sinensis]
          Length = 380

 Score = 65.1 bits (157), Expect = 8e-08
 Identities = 73/263 (27%), Positives = 114/263 (43%), Gaps = 11/263 (4%)
 Frame = +3

Query: 153 NSMELDPLSMLPDELLMTILSLTKSYRSAVWCSSLSKRLRNVYNKLPCLYLTDFELLEFS 332
           N  ++D +S LPDE+L  ILS     + AV    LS R ++++  LPCL   D   L F 
Sbjct: 18  NQEKMDRISSLPDEILCHILSFL-PIKCAVQTCILSSRWKHLWTSLPCLCFDD--SLWFK 74

Query: 333 PARECIARDEMLRDIVLNDIVSNVVTRHCVDVETFSLEFKLPAMD-------KRYISRLC 491
             R   +  ++L      + V+ V+  H  D+  FS+    P +        K ++S   
Sbjct: 75  DKRPGESTQDVLTRFA--NFVNKVLLFHSADINKFSVHCSEPNIYLTDLPPLKSWVSSAI 132

Query: 492 AKFINNPQVRHVYVKAEEDLFSTSAEIAPIISSTTLETLVL-YEFDANIIIDSFLRSDFS 668
            + + + ++ HVYV    +L         I +  TLE L L  +FD  I           
Sbjct: 133 ERNVGDIELNHVYVDVLIELPDN------ICTCKTLEMLKLKLDFDFKI-------PTSR 179

Query: 669 IVFPKLRVLELG-HFRIETLLWMDLVSKCPVLQHLKLSGNFDDK--CFPLTISSKSMTRL 839
           I FP L+ L    ++   T +   L + CPVL+ L +  + +DK     L ISS ++ RL
Sbjct: 180 ICFPSLKCLHAEMYYPHSTCITEKLFTICPVLEDLLIEIHLEDKHSVTNLNISSLTLKRL 239

Query: 840 DLRLVLYREFPNPYVVKVHTPQL 908
            L L         + V +  P L
Sbjct: 240 TLSLEKVLFSNTKHQVMIRAPNL 262


>ref|XP_006429610.1| hypothetical protein CICLE_v10013738mg [Citrus clementina]
           gi|568855239|ref|XP_006481215.1| PREDICTED:
           F-box/LRR-repeat protein At4g14103-like isoform X1
           [Citrus sinensis] gi|557531667|gb|ESR42850.1|
           hypothetical protein CICLE_v10013738mg [Citrus
           clementina]
          Length = 468

 Score = 65.1 bits (157), Expect = 8e-08
 Identities = 73/263 (27%), Positives = 114/263 (43%), Gaps = 11/263 (4%)
 Frame = +3

Query: 153 NSMELDPLSMLPDELLMTILSLTKSYRSAVWCSSLSKRLRNVYNKLPCLYLTDFELLEFS 332
           N  ++D +S LPDE+L  ILS     + AV    LS R ++++  LPCL   D   L F 
Sbjct: 18  NQEKMDRISSLPDEILCHILSFL-PIKCAVQTCILSSRWKHLWTSLPCLCFDD--SLWFK 74

Query: 333 PARECIARDEMLRDIVLNDIVSNVVTRHCVDVETFSLEFKLPAMD-------KRYISRLC 491
             R   +  ++L      + V+ V+  H  D+  FS+    P +        K ++S   
Sbjct: 75  DKRPGESTQDVLTRFA--NFVNKVLLFHSADINKFSVHCSEPNIYLTDLPPLKSWVSSAI 132

Query: 492 AKFINNPQVRHVYVKAEEDLFSTSAEIAPIISSTTLETLVL-YEFDANIIIDSFLRSDFS 668
            + + + ++ HVYV    +L         I +  TLE L L  +FD  I           
Sbjct: 133 ERNVGDIELNHVYVDVLIELPDN------ICTCKTLEMLKLKLDFDFKI-------PTSR 179

Query: 669 IVFPKLRVLELG-HFRIETLLWMDLVSKCPVLQHLKLSGNFDDK--CFPLTISSKSMTRL 839
           I FP L+ L    ++   T +   L + CPVL+ L +  + +DK     L ISS ++ RL
Sbjct: 180 ICFPSLKCLHAEMYYPHSTCITEKLFTICPVLEDLLIEIHLEDKHSVTNLNISSLTLKRL 239

Query: 840 DLRLVLYREFPNPYVVKVHTPQL 908
            L L         + V +  P L
Sbjct: 240 TLSLEKVLFSNTKHQVMIRAPNL 262


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