BLASTX nr result
ID: Ephedra28_contig00021166
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00021166
(412 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006827109.1| hypothetical protein AMTR_s00010p00244660 [A... 129 4e-28
gb|ABK26340.1| unknown [Picea sitchensis] gi|224285162|gb|ACN403... 129 5e-28
gb|EMT25827.1| 40S ribosomal protein SA [Aegilops tauschii] 128 7e-28
gb|EMS59326.1| 40S ribosomal protein SA [Triticum urartu] 128 7e-28
gb|ADE77919.1| unknown [Picea sitchensis] 128 7e-28
gb|ABK24517.1| unknown [Picea sitchensis] gi|224285889|gb|ACN406... 128 7e-28
gb|EMT31083.1| 40S ribosomal protein SA [Aegilops tauschii] 128 9e-28
gb|EMS60591.1| 40S ribosomal protein SA [Triticum urartu] 128 9e-28
pdb|3J60|A Chain A, Localization Of The Small Subunit Ribosomal ... 127 1e-27
ref|XP_004985475.1| PREDICTED: 40S ribosomal protein SA-like [Se... 127 1e-27
ref|NP_001060277.1| Os07g0616600 [Oryza sativa Japonica Group] g... 127 1e-27
gb|EAZ04711.1| hypothetical protein OsI_26872 [Oryza sativa Indi... 127 1e-27
ref|XP_006851847.1| hypothetical protein AMTR_s00041p00084080 [A... 127 2e-27
ref|XP_004958311.1| PREDICTED: 40S ribosomal protein SA-like [Se... 127 2e-27
ref|XP_003557751.1| PREDICTED: 40S ribosomal protein SA-like [Br... 127 2e-27
gb|EAY88799.1| hypothetical protein OsI_10272 [Oryza sativa Indi... 127 2e-27
gb|EAY90376.1| hypothetical protein OsI_11954 [Oryza sativa Indi... 127 2e-27
gb|ABF94326.1| 40S ribosomal protein SA, putative, expressed [Or... 127 2e-27
gb|AAK92638.1|AC079633_18 Putative 40S Ribosomal protein [Oryza ... 127 2e-27
gb|AFC88836.1| 40S ribosomal protein SA-like protein, partial [M... 127 2e-27
>ref|XP_006827109.1| hypothetical protein AMTR_s00010p00244660 [Amborella trichopoda]
gi|548831538|gb|ERM94346.1| hypothetical protein
AMTR_s00010p00244660 [Amborella trichopoda]
Length = 298
Score = 129 bits (324), Expect = 4e-28
Identities = 62/68 (91%), Positives = 66/68 (97%)
Frame = +1
Query: 208 AALTQKEADIQMMLAADVHLGTKNCDFQMERYVYARRSDGIYIINLGKTWEKLQMAARMI 387
A L+QKEADIQMMLAADVHLGTKNCDFQMERYV+ RR+DGIYIINLGKTWEKLQMAAR+I
Sbjct: 2 AELSQKEADIQMMLAADVHLGTKNCDFQMERYVFKRRTDGIYIINLGKTWEKLQMAARVI 61
Query: 388 VAIENPQD 411
VAIENPQD
Sbjct: 62 VAIENPQD 69
>gb|ABK26340.1| unknown [Picea sitchensis] gi|224285162|gb|ACN40308.1| unknown
[Picea sitchensis]
Length = 319
Score = 129 bits (323), Expect = 5e-28
Identities = 62/72 (86%), Positives = 66/72 (91%)
Frame = +1
Query: 196 AMAKAALTQKEADIQMMLAADVHLGTKNCDFQMERYVYARRSDGIYIINLGKTWEKLQMA 375
A L+QKEADIQMMLAADVHLGTKNCDFQMERYVY RRSDGI+IINLGKTWEKLQ+A
Sbjct: 2 AQKMGGLSQKEADIQMMLAADVHLGTKNCDFQMERYVYKRRSDGIFIINLGKTWEKLQLA 61
Query: 376 ARMIVAIENPQD 411
AR+IVAIENPQD
Sbjct: 62 ARVIVAIENPQD 73
>gb|EMT25827.1| 40S ribosomal protein SA [Aegilops tauschii]
Length = 308
Score = 128 bits (322), Expect = 7e-28
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +1
Query: 202 AKAALTQKEADIQMMLAADVHLGTKNCDFQMERYVYARRSDGIYIINLGKTWEKLQMAAR 381
A AL+QKE DIQMMLAADVHLGTKNCDFQMERY Y RRSDGIYIINLGKTWEKLQ+AAR
Sbjct: 8 APRALSQKEQDIQMMLAADVHLGTKNCDFQMERYAYKRRSDGIYIINLGKTWEKLQLAAR 67
Query: 382 MIVAIENPQD 411
+IVAIENPQD
Sbjct: 68 VIVAIENPQD 77
>gb|EMS59326.1| 40S ribosomal protein SA [Triticum urartu]
Length = 313
Score = 128 bits (322), Expect = 7e-28
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = +1
Query: 202 AKAALTQKEADIQMMLAADVHLGTKNCDFQMERYVYARRSDGIYIINLGKTWEKLQMAAR 381
A AL+QKE DIQMMLAADVHLGTKNCDFQMERY Y RRSDGIYIINLGKTWEKLQ+AAR
Sbjct: 13 APRALSQKEQDIQMMLAADVHLGTKNCDFQMERYAYKRRSDGIYIINLGKTWEKLQLAAR 72
Query: 382 MIVAIENPQD 411
+IVAIENPQD
Sbjct: 73 VIVAIENPQD 82
>gb|ADE77919.1| unknown [Picea sitchensis]
Length = 330
Score = 128 bits (322), Expect = 7e-28
Identities = 61/69 (88%), Positives = 66/69 (95%)
Frame = +1
Query: 205 KAALTQKEADIQMMLAADVHLGTKNCDFQMERYVYARRSDGIYIINLGKTWEKLQMAARM 384
K L+Q+EADIQMMLAADVHLGTKNCDFQMERYVY RRSDGI+IINLGKTWEKLQ+AAR+
Sbjct: 4 KGVLSQREADIQMMLAADVHLGTKNCDFQMERYVYKRRSDGIFIINLGKTWEKLQIAARV 63
Query: 385 IVAIENPQD 411
IVAIENPQD
Sbjct: 64 IVAIENPQD 72
>gb|ABK24517.1| unknown [Picea sitchensis] gi|224285889|gb|ACN40658.1| unknown
[Picea sitchensis]
Length = 319
Score = 128 bits (322), Expect = 7e-28
Identities = 61/72 (84%), Positives = 66/72 (91%)
Frame = +1
Query: 196 AMAKAALTQKEADIQMMLAADVHLGTKNCDFQMERYVYARRSDGIYIINLGKTWEKLQMA 375
A L+QKEAD+QMMLAADVHLGTKNCDFQMERYVY RRSDGI+IINLGKTWEKLQ+A
Sbjct: 2 AQKMGGLSQKEADVQMMLAADVHLGTKNCDFQMERYVYKRRSDGIFIINLGKTWEKLQLA 61
Query: 376 ARMIVAIENPQD 411
AR+IVAIENPQD
Sbjct: 62 ARVIVAIENPQD 73
>gb|EMT31083.1| 40S ribosomal protein SA [Aegilops tauschii]
Length = 306
Score = 128 bits (321), Expect = 9e-28
Identities = 61/67 (91%), Positives = 65/67 (97%)
Frame = +1
Query: 211 ALTQKEADIQMMLAADVHLGTKNCDFQMERYVYARRSDGIYIINLGKTWEKLQMAARMIV 390
AL+Q+E DIQMMLAADVHLGTKNCDFQMERYVY RR+DGIYIINLGKTWEKLQMAAR+IV
Sbjct: 10 ALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQMAARVIV 69
Query: 391 AIENPQD 411
AIENPQD
Sbjct: 70 AIENPQD 76
>gb|EMS60591.1| 40S ribosomal protein SA [Triticum urartu]
Length = 252
Score = 128 bits (321), Expect = 9e-28
Identities = 61/67 (91%), Positives = 65/67 (97%)
Frame = +1
Query: 211 ALTQKEADIQMMLAADVHLGTKNCDFQMERYVYARRSDGIYIINLGKTWEKLQMAARMIV 390
AL+Q+E DIQMMLAADVHLGTKNCDFQMERYVY RR+DGIYIINLGKTWEKLQMAAR+IV
Sbjct: 10 ALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQMAARVIV 69
Query: 391 AIENPQD 411
AIENPQD
Sbjct: 70 AIENPQD 76
>pdb|3J60|A Chain A, Localization Of The Small Subunit Ribosomal Proteins Into
A 5.5 A Cryo-em Map Of Triticum Aestivum Translating 80s
Ribosome
Length = 260
Score = 127 bits (320), Expect = 1e-27
Identities = 61/70 (87%), Positives = 66/70 (94%)
Frame = +1
Query: 202 AKAALTQKEADIQMMLAADVHLGTKNCDFQMERYVYARRSDGIYIINLGKTWEKLQMAAR 381
A AL+Q+E DIQMMLAADVHLGTKNCDFQMERYVY RR+DGIYIINLGKTWEKLQ+AAR
Sbjct: 8 AARALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAAR 67
Query: 382 MIVAIENPQD 411
+IVAIENPQD
Sbjct: 68 VIVAIENPQD 77
>ref|XP_004985475.1| PREDICTED: 40S ribosomal protein SA-like [Setaria italica]
Length = 309
Score = 127 bits (320), Expect = 1e-27
Identities = 61/70 (87%), Positives = 66/70 (94%)
Frame = +1
Query: 202 AKAALTQKEADIQMMLAADVHLGTKNCDFQMERYVYARRSDGIYIINLGKTWEKLQMAAR 381
A AL+QKE DIQMMLAADVHLGTKNCDFQMERYV+ RR+DGIYIINLGKTWEKLQ+AAR
Sbjct: 9 APRALSQKETDIQMMLAADVHLGTKNCDFQMERYVFKRRTDGIYIINLGKTWEKLQLAAR 68
Query: 382 MIVAIENPQD 411
+IVAIENPQD
Sbjct: 69 VIVAIENPQD 78
>ref|NP_001060277.1| Os07g0616600 [Oryza sativa Japonica Group]
gi|33146943|dbj|BAC79991.1| putative 40S ribosomal
protein [Oryza sativa Japonica Group]
gi|113611813|dbj|BAF22191.1| Os07g0616600 [Oryza sativa
Japonica Group] gi|125601085|gb|EAZ40661.1| hypothetical
protein OsJ_25132 [Oryza sativa Japonica Group]
gi|215678910|dbj|BAG96340.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215734975|dbj|BAG95697.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215740977|dbj|BAG97472.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215764959|dbj|BAG86656.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 305
Score = 127 bits (320), Expect = 1e-27
Identities = 61/70 (87%), Positives = 66/70 (94%)
Frame = +1
Query: 202 AKAALTQKEADIQMMLAADVHLGTKNCDFQMERYVYARRSDGIYIINLGKTWEKLQMAAR 381
A AL+Q+E DIQMMLAADVHLGTKNCDFQMERYVY RR+DGIYIINLGKTWEKLQ+AAR
Sbjct: 8 AARALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAAR 67
Query: 382 MIVAIENPQD 411
+IVAIENPQD
Sbjct: 68 VIVAIENPQD 77
>gb|EAZ04711.1| hypothetical protein OsI_26872 [Oryza sativa Indica Group]
Length = 305
Score = 127 bits (320), Expect = 1e-27
Identities = 61/70 (87%), Positives = 66/70 (94%)
Frame = +1
Query: 202 AKAALTQKEADIQMMLAADVHLGTKNCDFQMERYVYARRSDGIYIINLGKTWEKLQMAAR 381
A AL+Q+E DIQMMLAADVHLGTKNCDFQMERYVY RR+DGIYIINLGKTWEKLQ+AAR
Sbjct: 8 AARALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAAR 67
Query: 382 MIVAIENPQD 411
+IVAIENPQD
Sbjct: 68 VIVAIENPQD 77
>ref|XP_006851847.1| hypothetical protein AMTR_s00041p00084080 [Amborella trichopoda]
gi|548855430|gb|ERN13314.1| hypothetical protein
AMTR_s00041p00084080 [Amborella trichopoda]
Length = 312
Score = 127 bits (319), Expect = 2e-27
Identities = 60/69 (86%), Positives = 65/69 (94%)
Frame = +1
Query: 205 KAALTQKEADIQMMLAADVHLGTKNCDFQMERYVYARRSDGIYIINLGKTWEKLQMAARM 384
K L+QKEADIQMMLAADVHLGTKNCDFQMERY + RR+DGIYIINLGKTWEKLQ+AAR+
Sbjct: 4 KTGLSQKEADIQMMLAADVHLGTKNCDFQMERYAFKRRTDGIYIINLGKTWEKLQLAARV 63
Query: 385 IVAIENPQD 411
IVAIENPQD
Sbjct: 64 IVAIENPQD 72
>ref|XP_004958311.1| PREDICTED: 40S ribosomal protein SA-like [Setaria italica]
Length = 309
Score = 127 bits (319), Expect = 2e-27
Identities = 61/70 (87%), Positives = 66/70 (94%)
Frame = +1
Query: 202 AKAALTQKEADIQMMLAADVHLGTKNCDFQMERYVYARRSDGIYIINLGKTWEKLQMAAR 381
A AL+QKE DIQMMLAADVHLGTKNCDFQMERYV+ RR+DGIYIINLGKTWEKLQ+AAR
Sbjct: 9 AARALSQKELDIQMMLAADVHLGTKNCDFQMERYVFKRRTDGIYIINLGKTWEKLQLAAR 68
Query: 382 MIVAIENPQD 411
+IVAIENPQD
Sbjct: 69 VIVAIENPQD 78
>ref|XP_003557751.1| PREDICTED: 40S ribosomal protein SA-like [Brachypodium distachyon]
Length = 301
Score = 127 bits (319), Expect = 2e-27
Identities = 61/70 (87%), Positives = 66/70 (94%)
Frame = +1
Query: 202 AKAALTQKEADIQMMLAADVHLGTKNCDFQMERYVYARRSDGIYIINLGKTWEKLQMAAR 381
A AL+Q+E DIQMMLAADVHLGTKNCDFQMERYV+ RRSDGIYIINLGKTWEKLQ+AAR
Sbjct: 9 APRALSQREQDIQMMLAADVHLGTKNCDFQMERYVFKRRSDGIYIINLGKTWEKLQLAAR 68
Query: 382 MIVAIENPQD 411
+IVAIENPQD
Sbjct: 69 VIVAIENPQD 78
>gb|EAY88799.1| hypothetical protein OsI_10272 [Oryza sativa Indica Group]
Length = 305
Score = 127 bits (319), Expect = 2e-27
Identities = 61/70 (87%), Positives = 65/70 (92%)
Frame = +1
Query: 202 AKAALTQKEADIQMMLAADVHLGTKNCDFQMERYVYARRSDGIYIINLGKTWEKLQMAAR 381
A AL+Q E D+QMMLAADVHLGTKNCDFQMERYVY RRSDGIYIINLGKTWEKLQ+AAR
Sbjct: 8 AARALSQAEQDVQMMLAADVHLGTKNCDFQMERYVYKRRSDGIYIINLGKTWEKLQLAAR 67
Query: 382 MIVAIENPQD 411
+IVAIENPQD
Sbjct: 68 VIVAIENPQD 77
>gb|EAY90376.1| hypothetical protein OsI_11954 [Oryza sativa Indica Group]
Length = 310
Score = 127 bits (319), Expect = 2e-27
Identities = 61/70 (87%), Positives = 66/70 (94%)
Frame = +1
Query: 202 AKAALTQKEADIQMMLAADVHLGTKNCDFQMERYVYARRSDGIYIINLGKTWEKLQMAAR 381
A AL+Q+E DIQMMLAADVHLGTKNCDFQMERYVY RRSDGI+IINLGKTWEKLQ+AAR
Sbjct: 10 APRALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRSDGIFIINLGKTWEKLQLAAR 69
Query: 382 MIVAIENPQD 411
+IVAIENPQD
Sbjct: 70 VIVAIENPQD 79
>gb|ABF94326.1| 40S ribosomal protein SA, putative, expressed [Oryza sativa
Japonica Group]
Length = 269
Score = 127 bits (319), Expect = 2e-27
Identities = 61/70 (87%), Positives = 65/70 (92%)
Frame = +1
Query: 202 AKAALTQKEADIQMMLAADVHLGTKNCDFQMERYVYARRSDGIYIINLGKTWEKLQMAAR 381
A AL+Q E D+QMMLAADVHLGTKNCDFQMERYVY RRSDGIYIINLGKTWEKLQ+AAR
Sbjct: 8 AARALSQAEQDVQMMLAADVHLGTKNCDFQMERYVYKRRSDGIYIINLGKTWEKLQLAAR 67
Query: 382 MIVAIENPQD 411
+IVAIENPQD
Sbjct: 68 VIVAIENPQD 77
>gb|AAK92638.1|AC079633_18 Putative 40S Ribosomal protein [Oryza sativa Japonica Group]
gi|108706530|gb|ABF94325.1| 40S ribosomal protein SA,
putative, expressed [Oryza sativa Japonica Group]
gi|125585164|gb|EAZ25828.1| hypothetical protein
OsJ_09668 [Oryza sativa Japonica Group]
gi|213959144|gb|ACJ54906.1| 40S ribosomal protein [Oryza
sativa Japonica Group] gi|215678548|dbj|BAG92203.1|
unnamed protein product [Oryza sativa Japonica Group]
gi|215737442|dbj|BAG96572.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215737710|dbj|BAG96840.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215740833|dbj|BAG96989.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|347737115|gb|AEP20530.1| 40S ribosomal protein [Oryza
sativa Japonica Group]
Length = 305
Score = 127 bits (319), Expect = 2e-27
Identities = 61/70 (87%), Positives = 65/70 (92%)
Frame = +1
Query: 202 AKAALTQKEADIQMMLAADVHLGTKNCDFQMERYVYARRSDGIYIINLGKTWEKLQMAAR 381
A AL+Q E D+QMMLAADVHLGTKNCDFQMERYVY RRSDGIYIINLGKTWEKLQ+AAR
Sbjct: 8 AARALSQAEQDVQMMLAADVHLGTKNCDFQMERYVYKRRSDGIYIINLGKTWEKLQLAAR 67
Query: 382 MIVAIENPQD 411
+IVAIENPQD
Sbjct: 68 VIVAIENPQD 77
>gb|AFC88836.1| 40S ribosomal protein SA-like protein, partial [Miscanthus
sinensis]
Length = 281
Score = 127 bits (318), Expect = 2e-27
Identities = 60/67 (89%), Positives = 65/67 (97%)
Frame = +1
Query: 211 ALTQKEADIQMMLAADVHLGTKNCDFQMERYVYARRSDGIYIINLGKTWEKLQMAARMIV 390
AL+Q+E DIQMMLAADVHLGTKNCDFQMERYVY RR+DGIYIINLGKTWEKLQ+AAR+IV
Sbjct: 2 ALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAARVIV 61
Query: 391 AIENPQD 411
AIENPQD
Sbjct: 62 AIENPQD 68