BLASTX nr result

ID: Ephedra28_contig00021156 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00021156
         (1367 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001761999.1| predicted protein [Physcomitrella patens] gi...    94   1e-35
ref|XP_001751345.1| predicted protein [Physcomitrella patens] gi...    94   1e-34

>ref|XP_001761999.1| predicted protein [Physcomitrella patens] gi|162686716|gb|EDQ73103.1|
            predicted protein [Physcomitrella patens]
          Length = 970

 Score = 94.0 bits (232), Expect(2) = 1e-35
 Identities = 62/179 (34%), Positives = 98/179 (54%), Gaps = 13/179 (7%)
 Frame = +1

Query: 79   KSPV-ANGKSPIANGKSPVSVKSEKSNKPGDSE------KLVPEEENSKKAIRRR-MLGN 234
            K+PV A    P  +  +P S +  + N+   +       +  P  ++S K I R  +LGN
Sbjct: 602  KTPVRAKSVEPKPSSVTPPSSRQLRKNRKSQTFFVPQVWETKPTRQDSLKDIDRWFLLGN 661

Query: 235  SFSVKVIAYLLGSLVDASTRTNKAEYVLPYKNIEEQECSVMAVGDLWALYNGRGLPNWYG 414
            +FSV+VIAYL   L+ A  R++  + V    +++E+E S M  GD+WAL+N  G PNWY 
Sbjct: 662  TFSVQVIAYLTSPLLRAEVRSH-GKRVNIVGSVKEEELSAMEPGDVWALFNEYGRPNWYA 720

Query: 415  VIVKRSGGRFT-----KSNKNGKNGSVQIEVKFLDFTYDYAVQEADDLCPEHGTGRYKI 576
            VI  R+G RF+        +N     ++IE+K+L+ T  Y  +E D+  P+ G+G  K+
Sbjct: 721  VIESRTGDRFSAFPDATGKRNVTKLPLKIEMKYLEMTPAYLKEEVDEWNPQRGSGLLKL 779



 Score = 84.3 bits (207), Expect(2) = 1e-35
 Identities = 42/102 (41%), Positives = 65/102 (63%)
 Frame = +2

Query: 614  QNSYFVYPGKNEVWAINHRLRAKCAPFFVFVTESSFSIKKKQLETTRPGKEGFKASCYAL 793
            ++SYFVYPG +EVWA+ +      + +FV+V+ES+ S    +L   +PG+EGF A C  L
Sbjct: 803  EDSYFVYPGNDEVWAVYNG--ETLSRYFVYVSESTIS--SDRLRRGKPGQEGFHARCLLL 858

Query: 794  QQTSQPEVYRITDKLVEFDSLSNFAYSVPYIYKDQKGLLKIE 919
            Q+T++ E++  T  +VEF  L  F + VP+  K +  LLK+E
Sbjct: 859  QKTAEHEIFLKTSTMVEFTDLQPFCFRVPFYIKHEANLLKVE 900


>ref|XP_001751345.1| predicted protein [Physcomitrella patens]
           gi|162697326|gb|EDQ83662.1| predicted protein
           [Physcomitrella patens]
          Length = 812

 Score = 93.6 bits (231), Expect(2) = 1e-34
 Identities = 55/140 (39%), Positives = 81/140 (57%), Gaps = 5/140 (3%)
 Frame = +1

Query: 172 EKLVPEEENSKKAIRRRMLGNSFSVKVIAYLLGSLVDASTRTNKAEYVLPYKNIEEQECS 351
           E+    +E+ K   R  +LGNSFSV+VI YL  SL+ +  R +  + V    ++ E+E S
Sbjct: 463 ERNPTRQESLKDLDRWFLLGNSFSVQVITYLTSSLLKSEVRFH-GKAVNIVGSVREEELS 521

Query: 352 VMAVGDLWALYNGRGLPNWYGVIVKRSGGRFTK-SNKNGKNG----SVQIEVKFLDFTYD 516
            M  GD+WAL+N  G PNWY VI  R+G RF++  +  GK       + IE+K+L+ T  
Sbjct: 522 AMEPGDVWALFNEHGRPNWYAVIQSRTGDRFSEIPDATGKRSITKLPLSIEMKYLEMTPA 581

Query: 517 YAVQEADDLCPEHGTGRYKI 576
           YA  E D+  P+ G+G  K+
Sbjct: 582 YAKDEVDEWNPQRGSGLLKL 601



 Score = 81.6 bits (200), Expect(2) = 1e-34
 Identities = 46/120 (38%), Positives = 67/120 (55%), Gaps = 1/120 (0%)
 Frame = +2

Query: 614 QNSYFVYPGKNEVWAINHRLRAKCAPFFVFVTESSFSIKKKQLETTRPGK-EGFKASCYA 790
           +NSYFVYPG +EVWA+ H      + +FV+V ES+    +  L   +PG+ EGF A C  
Sbjct: 625 ENSYFVYPGNDEVWAVYHA--ETLSRYFVYVVESTIICAR--LLNDKPGQDEGFLARCLL 680

Query: 791 LQQTSQPEVYRITDKLVEFDSLSNFAYSVPYIYKDQKGLLKIEYCSNRENSFAEGQGERT 970
           LQ+T++ EVY  T K VE   +  F + VP+  K++  LLK+E    +     +   E T
Sbjct: 681 LQKTTEHEVYLKTSKEVELSDIQPFCFRVPFHIKNEANLLKVEVSGVKSRQSMKADRETT 740


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