BLASTX nr result

ID: Ephedra28_contig00021153 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00021153
         (730 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006411876.1| hypothetical protein EUTSA_v10026086mg [Eutr...    63   1e-07
ref|XP_006301307.1| hypothetical protein CARUB_v10021721mg [Caps...    61   4e-07
gb|EOX91642.1| LOB domain-containing protein 38 [Theobroma cacao]      60   7e-07
ref|XP_006485788.1| PREDICTED: LOB domain-containing protein 41-...    59   2e-06
emb|CBI33654.3| unnamed protein product [Vitis vinifera]               59   2e-06
ref|XP_002329332.1| predicted protein [Populus trichocarpa] gi|5...    59   2e-06
ref|XP_006289206.1| hypothetical protein CARUB_v10002654mg [Caps...    58   3e-06
ref|XP_006279210.1| hypothetical protein CARUB_v10000015mg [Caps...    58   3e-06
ref|XP_006440966.1| hypothetical protein CICLE_v10022068mg [Citr...    57   5e-06
ref|XP_002283795.1| PREDICTED: LOB domain-containing protein 41 ...    57   5e-06
ref|XP_002887102.1| predicted protein [Arabidopsis lyrata subsp....    57   6e-06
gb|ABY59244.1| At1g67100-like protein [Arabidopsis lyrata subsp....    57   6e-06

>ref|XP_006411876.1| hypothetical protein EUTSA_v10026086mg [Eutrema salsugineum]
           gi|557113046|gb|ESQ53329.1| hypothetical protein
           EUTSA_v10026086mg [Eutrema salsugineum]
          Length = 246

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 41/114 (35%), Positives = 60/114 (52%), Gaps = 10/114 (8%)
 Frame = +3

Query: 3   RTVDPVFGSLGLLCSGNWHLCHAAVQAVLEGYTF---------PSIISPSPPQGMMGEDF 155
           RTV+PV G++G+L +GNWH+C AAV+ VL G T          PS+IS      M+  D 
Sbjct: 74  RTVNPVNGAVGMLWTGNWHVCQAAVETVLRGGTLRPMSDLLESPSLISSDDSSEMICTDI 133

Query: 156 GKAKVSKVGNKNGRFKHSKNKARKERSSQIECVDNDTMKGSHVSAD-ELVDNHG 314
            +       N + RF  S++K     +++IE VD   +K     +D +L  NHG
Sbjct: 134 RRDVSRNNQNHHCRFSSSRSKL---NTTEIEPVDRKRVKTDRYGSDLDLQLNHG 184


>ref|XP_006301307.1| hypothetical protein CARUB_v10021721mg [Capsella rubella]
           gi|482570017|gb|EOA34205.1| hypothetical protein
           CARUB_v10021721mg [Capsella rubella]
          Length = 235

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 44/127 (34%), Positives = 63/127 (49%), Gaps = 9/127 (7%)
 Frame = +3

Query: 3   RTVDPVFGSLGLLCSGNWHLCHAAVQAVLEGYTFPSIISPSPPQGMMGEDFGKAKVSKVG 182
           R V+P++GS+GLL SGNWHLC AAV+AV+ G       SP  P        G+A      
Sbjct: 76  RIVNPIYGSVGLLWSGNWHLCQAAVEAVMRG-------SPVTPIAFDAAVTGQAPPYNNN 128

Query: 183 NKNGRFKHSKNKARK-ERSSQIECVDNDTMKG----SHVSADELVDNHGSCGEN----MG 335
           NK    +H  +K    +R S+  C +   ++     S +S +  V + G+  E     +G
Sbjct: 129 NKLCDIRHVSSKEESVKRRSRGACKEERNVRSQSHESSLSHESPVSSEGTTTEEPKTWIG 188

Query: 336 LELELSL 356
           LEL L L
Sbjct: 189 LELTLGL 195


>gb|EOX91642.1| LOB domain-containing protein 38 [Theobroma cacao]
          Length = 231

 Score = 60.1 bits (144), Expect = 7e-07
 Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 8/85 (9%)
 Frame = +3

Query: 3   RTVDPVFGSLGLLCSGNWHLCHAAVQAVLEGYT---FPSIISPSPPQGMMGE----DFGK 161
           RTV+PV G++GLL +GNWH+C AAV+ VL G T    P +++P+P      E    D  K
Sbjct: 74  RTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRAMPELMAPTPASDETSEATCTDMWK 133

Query: 162 AKVSKVG-NKNGRFKHSKNKARKER 233
            + +    N N RF +S++K   +R
Sbjct: 134 LQETATNLNSNCRFSNSRSKVSPKR 158


>ref|XP_006485788.1| PREDICTED: LOB domain-containing protein 41-like [Citrus sinensis]
          Length = 230

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 14/127 (11%)
 Frame = +3

Query: 3   RTVDPVFGSLGLLCSGNWHLCHAAVQAVLEGYTFPSIISPSPPQG----MMGEDFGKAKV 170
           R V+P++GS+GL+ SG WHLC AAV+AV  G     + S S  Q      + +D   A  
Sbjct: 76  RIVNPIYGSVGLMWSGRWHLCQAAVEAVFRGEPVTPLSSESALQAGDIRHVSKDESSAAA 135

Query: 171 SKVGN-----KNGRFKHS--KNKARKERSSQIECVDN--DTMKGSHVSAD-ELVDNHGSC 320
           + V +     K+ RFK S  K +++ ER++  + V+   D   G   S D EL       
Sbjct: 136 AAVSDKLHKVKSRRFKRSAPKPRSKPERAADAKVVEPLLDNSGGESTSCDPELTQRDSGE 195

Query: 321 GENMGLE 341
           G+++ +E
Sbjct: 196 GDSVSVE 202


>emb|CBI33654.3| unnamed protein product [Vitis vinifera]
          Length = 187

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 43/113 (38%), Positives = 62/113 (54%), Gaps = 5/113 (4%)
 Frame = +3

Query: 3   RTVDPVFGSLGLLCSGNWHLCHAAVQAVLEGYTFPSIISPSPP--QGMMGEDFGKAKVSK 176
           R V+P++GS+GLL SG+WHLC AAV+AVL+G     I S +    QG   + +    VSK
Sbjct: 76  RIVNPIYGSVGLLWSGSWHLCQAAVEAVLKGEPITQITSEAAATGQGPPLKAYDIRHVSK 135

Query: 177 VGNKNGRFKH-SKNKARKERSSQIECVDNDTMKG-SHVSADELVD-NHGSCGE 326
             N      H +KN+ R +RS     +D ++  G ++    E  D  HG CG+
Sbjct: 136 DENSAANDLHRAKNRCRFKRSG--SRLDGESPVGAAYRGGREPRDCEHGVCGD 186


>ref|XP_002329332.1| predicted protein [Populus trichocarpa]
           gi|566171613|ref|XP_006383457.1| LOB domain protein 41
           [Populus trichocarpa] gi|550339068|gb|ERP61254.1| LOB
           domain protein 41 [Populus trichocarpa]
          Length = 233

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 40/125 (32%), Positives = 62/125 (49%), Gaps = 7/125 (5%)
 Frame = +3

Query: 3   RTVDPVFGSLGLLCSGNWHLCHAAVQAVLEGYTFPSIISPSPPQGMMGEDFGKAKVSKVG 182
           R V+P++GS+GL+ SG+W LC AAV+AVL+G     I S +   G  G       +  V 
Sbjct: 76  RIVNPIYGSVGLMWSGSWQLCQAAVEAVLKGAPITPINSEAAVNG-HGPPLKVYDIRHVS 134

Query: 183 -NKNGRFKHSKNKARK------ERSSQIECVDNDTMKGSHVSADELVDNHGSCGENMGLE 341
             +N    +  N+AR          S++  +D D+ +     A ++  N G  G  +GL+
Sbjct: 135 KEENSAASNDANRARTRCRSSVSHQSELAVLDGDSKESDESMAHDVASN-GISGLELGLD 193

Query: 342 LELSL 356
           L L L
Sbjct: 194 LTLGL 198


>ref|XP_006289206.1| hypothetical protein CARUB_v10002654mg [Capsella rubella]
           gi|482557912|gb|EOA22104.1| hypothetical protein
           CARUB_v10002654mg [Capsella rubella]
          Length = 231

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 45/125 (36%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
 Frame = +3

Query: 3   RTVDPVFGSLGLLCSGNWHLCHAAVQAVLEGYTFPSIISPSPP--QGMMGEDFGKAKVSK 176
           R V+P++GS+GLL SG+W LC AAV AVL+G     I + +    QG   + +    +SK
Sbjct: 76  RVVNPIYGSVGLLWSGSWQLCQAAVDAVLKGEAITPIATDTAANGQGPPIKVYDIRHISK 135

Query: 177 VGN--KNGRFKHSKN-KARKERSSQIECVDNDTMKG--SHVSADELVDNHGSCGENMGLE 341
             N   NG  +H K  K R+ ++ Q E  +  +     SH S DE          N  +E
Sbjct: 136 KENAAANGSSRHRKRYKTRRVKAKQEEKANEASHDSSLSHQSEDETA--------NFPIE 187

Query: 342 LELSL 356
           LEL L
Sbjct: 188 LELKL 192


>ref|XP_006279210.1| hypothetical protein CARUB_v10000015mg [Capsella rubella]
           gi|482547869|gb|EOA12108.1| hypothetical protein
           CARUB_v10000015mg [Capsella rubella]
          Length = 231

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 45/125 (36%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
 Frame = +3

Query: 3   RTVDPVFGSLGLLCSGNWHLCHAAVQAVLEGYTFPSIISPSPP--QGMMGEDFGKAKVSK 176
           R V+P++GS+GLL SG+W LC AAV AVL+G     I + +    QG   + +    +SK
Sbjct: 76  RVVNPIYGSVGLLWSGSWQLCQAAVDAVLKGEAITPIATDTAANGQGPPIKVYDIRHISK 135

Query: 177 VGN--KNGRFKHSKN-KARKERSSQIECVDNDTMKG--SHVSADELVDNHGSCGENMGLE 341
             N   NG  +H K  K R+ ++ Q E  +  +     SH S DE          N  +E
Sbjct: 136 KENAAANGSSRHRKRYKTRRVKAKQEEKANEASHDSSLSHQSEDETA--------NFPIE 187

Query: 342 LELSL 356
           LEL L
Sbjct: 188 LELKL 192


>ref|XP_006440966.1| hypothetical protein CICLE_v10022068mg [Citrus clementina]
           gi|557543228|gb|ESR54206.1| hypothetical protein
           CICLE_v10022068mg [Citrus clementina]
          Length = 230

 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 43/129 (33%), Positives = 63/129 (48%), Gaps = 16/129 (12%)
 Frame = +3

Query: 3   RTVDPVFGSLGLLCSGNWHLCHAAVQAVLEGYTFPSIISPSPPQ-----------GMMGE 149
           R V+P++GS+GL+ SG WHLC AAV+AV  G     + S S  Q                
Sbjct: 76  RIVNPIYGSVGLMWSGRWHLCQAAVEAVFRGEPVTPLSSESALQAGDIRHVSKDESSAAA 135

Query: 150 DFGKAKVSKVGNKNGRFKHS--KNKARKERSSQIECVDN--DTMKGSHVSAD-ELVDNHG 314
             G  K+ KV  K+ RFK S  K +++ ER++  + V+   D   G   S D EL     
Sbjct: 136 AAGSDKLHKV--KSRRFKRSAPKPRSKPERAADAKVVEPLLDNSGGESTSCDPELTQRDS 193

Query: 315 SCGENMGLE 341
             G+++ +E
Sbjct: 194 GEGDSVSVE 202


>ref|XP_002283795.1| PREDICTED: LOB domain-containing protein 41 [Vitis vinifera]
           gi|147795554|emb|CAN72182.1| hypothetical protein
           VITISV_004355 [Vitis vinifera]
          Length = 283

 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 35/81 (43%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
 Frame = +3

Query: 3   RTVDPVFGSLGLLCSGNWHLCHAAVQAVLEGYTFPSIISPSPP--QGMMGEDFGKAKVSK 176
           R V+P++GS+GLL SG+WHLC AAV+AVL+G     I S +    QG   + +    VSK
Sbjct: 76  RIVNPIYGSVGLLWSGSWHLCQAAVEAVLKGEPITQITSEAAATGQGPPLKAYDIRHVSK 135

Query: 177 VGNKNGRFKH-SKNKARKERS 236
             N      H +KN+ R +RS
Sbjct: 136 DENSAANDLHRAKNRCRFKRS 156


>ref|XP_002887102.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297332943|gb|EFH63361.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 233

 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 40/120 (33%), Positives = 59/120 (49%), Gaps = 2/120 (1%)
 Frame = +3

Query: 3   RTVDPVFGSLGLLCSGNWHLCHAAVQAVLEGYTFPSIISPSPPQGMMGEDFGK-AKVSKV 179
           R V+P++GS+GLL SGNWHLC AAV+AV+ G     I   +   G       K   +  V
Sbjct: 76  RIVNPIYGSVGLLWSGNWHLCQAAVEAVMRGSPVTPIACDAAVTGQAPPFNNKLCDIRHV 135

Query: 180 GNKNGRFK-HSKNKARKERSSQIECVDNDTMKGSHVSADELVDNHGSCGENMGLELELSL 356
            +K    K  S+   ++ER+ +    ++     S VS++E           +GLEL L L
Sbjct: 136 SSKEENVKRRSRGACKEERNVRSLSHESSLSHESPVSSEETTTEEPKSW--IGLELTLGL 193


>gb|ABY59244.1| At1g67100-like protein [Arabidopsis lyrata subsp. petraea]
          Length = 212

 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 40/120 (33%), Positives = 59/120 (49%), Gaps = 2/120 (1%)
 Frame = +3

Query: 3   RTVDPVFGSLGLLCSGNWHLCHAAVQAVLEGYTFPSIISPSPPQGMMGEDFGK-AKVSKV 179
           R V+P++GS+GLL SGNWHLC AAV+AV+ G     I   +   G       K   +  V
Sbjct: 65  RIVNPIYGSVGLLWSGNWHLCQAAVEAVMRGSPVTPIACDAAVTGQAPPFNNKLCDIRHV 124

Query: 180 GNKNGRFK-HSKNKARKERSSQIECVDNDTMKGSHVSADELVDNHGSCGENMGLELELSL 356
            +K    K  S+   ++ER+ +    ++     S VS++E           +GLEL L L
Sbjct: 125 SSKEENVKRRSRGACKEERNVRSLSHESSLSHESPVSSEETTTEEPKSW--IGLELTLGL 182


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