BLASTX nr result

ID: Ephedra28_contig00021145 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00021145
         (388 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006379960.1| hypothetical protein POPTR_0008s18460g, part...    55   7e-06
ref|XP_002333044.1| predicted protein [Populus trichocarpa]            55   7e-06
ref|XP_006379971.1| hypothetical protein POPTR_0008s185502g, par...    55   1e-05
ref|XP_002333587.1| predicted protein [Populus trichocarpa]            55   1e-05

>ref|XP_006379960.1| hypothetical protein POPTR_0008s18460g, partial [Populus
           trichocarpa] gi|550333377|gb|ERP57757.1| hypothetical
           protein POPTR_0008s18460g, partial [Populus trichocarpa]
          Length = 194

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
 Frame = +2

Query: 59  ILLLLMVHVSLMGYVQ-SCHEEEAIQLLYFKSNITSAGKDDLSSWISGTDCCKTWKRVVC 235
           +L +L++ VSL G+    C EEE I LL+ K ++       L SWI     C  W+ +VC
Sbjct: 7   VLTVLVITVSLQGWQPLGCLEEERIALLHLKDSLNYPNGTSLPSWIKADAHCCDWESIVC 66

Query: 236 NPQTSHIENLIFDSLDIQATGN 301
           N  T  +  L  DS+  Q  G+
Sbjct: 67  NSSTGRVTRLYLDSVRNQELGD 88


>ref|XP_002333044.1| predicted protein [Populus trichocarpa]
          Length = 123

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
 Frame = +2

Query: 59  ILLLLMVHVSLMGYVQ-SCHEEEAIQLLYFKSNITSAGKDDLSSWISGTDCCKTWKRVVC 235
           +L +L++ VSL G+    C EEE I LL+ K ++       L SWI     C  W+ +VC
Sbjct: 7   VLTVLVITVSLQGWQPLGCLEEERIALLHLKDSLNYPNGTSLPSWIKADAHCCDWESIVC 66

Query: 236 NPQTSHIENLIFDSLDIQATGN 301
           N  T  +  L  DS+  Q  G+
Sbjct: 67  NSSTGRVTRLYLDSVRNQELGD 88


>ref|XP_006379971.1| hypothetical protein POPTR_0008s185502g, partial [Populus
           trichocarpa] gi|550333388|gb|ERP57768.1| hypothetical
           protein POPTR_0008s185502g, partial [Populus
           trichocarpa]
          Length = 119

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
 Frame = +2

Query: 59  ILLLLMVHVSLMGYVQ-SCHEEEAIQLLYFKSNITSAGKDDLSSWISGTDCCKTWKRVVC 235
           +  +L++ VSL G++   C EEE I LL+ K ++       L SWI     C  W+ +VC
Sbjct: 7   VFTVLVITVSLQGWLPLGCLEEERIALLHLKDSLNYPNGTSLPSWIKADAHCCDWESIVC 66

Query: 236 NPQTSHIENLIFDSLDIQATGN 301
           N  T  +  L  DS+  Q  G+
Sbjct: 67  NSSTGRVTRLYLDSVRNQELGD 88


>ref|XP_002333587.1| predicted protein [Populus trichocarpa]
          Length = 123

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
 Frame = +2

Query: 59  ILLLLMVHVSLMGYVQ-SCHEEEAIQLLYFKSNITSAGKDDLSSWISGTDCCKTWKRVVC 235
           +  +L++ VSL G++   C EEE I LL+ K ++       L SWI     C  W+ +VC
Sbjct: 7   VFTVLVITVSLQGWLPLGCLEEERIALLHLKDSLNYPNGTSLPSWIKADAHCCDWESIVC 66

Query: 236 NPQTSHIENLIFDSLDIQATGN 301
           N  T  +  L  DS+  Q  G+
Sbjct: 67  NSSTGRVTRLYLDSVRNQELGD 88


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