BLASTX nr result

ID: Ephedra28_contig00021073 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00021073
         (1259 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006841336.1| hypothetical protein AMTR_s00207p00023860 [A...   153   2e-34
ref|XP_001698520.1| hypothetical protein CHLREDRAFT_187651 [Chla...    71   1e-09

>ref|XP_006841336.1| hypothetical protein AMTR_s00207p00023860 [Amborella trichopoda]
            gi|548843289|gb|ERN03011.1| hypothetical protein
            AMTR_s00207p00023860 [Amborella trichopoda]
          Length = 294

 Score =  153 bits (386), Expect = 2e-34
 Identities = 106/324 (32%), Positives = 157/324 (48%)
 Frame = +1

Query: 67   MENVPDAVLQNVMLPKMGSSELGALACCSRRMCGLATQDHLWRPLFNSHFNMSYLFRRYY 246
            +E +P+++L + +L  +   EL  L+C + ++  LA  D LW P+      +  L +   
Sbjct: 10   LERLPESILLHKILSLLQPRELALLSCSASKLRPLAISDELWFPIC---CKLGLLPKPVK 66

Query: 247  NHVDCTDSAPPPRPWLSWHRAFCYHQSIRCSECNEHTPYVFTLLPSHVRLCERCELSNPK 426
              +        P PW +WH+ FC  ++++C ECN  TPYVF L PS VRLCERCE    K
Sbjct: 67   GKLQQN-----PYPWRNWHQLFCCKKNVKCIECNGDTPYVFKLTPSPVRLCERCEFMGQK 121

Query: 427  YSLVTELEAKTRYYLNDEELKNLPFKEMKIRKAFVYLFLRSSVEDLAHRKQVHVEGTENS 606
            Y+L TELEAK R+ L D +L++LPFKEMK+++  VY FLRSS+E+ A ++  H+   E  
Sbjct: 122  YALATELEAKGRFLLTDVDLQSLPFKEMKLKRMSVYFFLRSSLENTA-KENTHLLENEGR 180

Query: 607  GVTKGEENNVLFSEAASCSKSSIHMFVDCEGSFCNESDSAYQNESGYAGLAMLDQPNKTP 786
             V   E N                      G  C E    Y+   G +      +P    
Sbjct: 181  VVDITESNE--------------------SGEECEE---FYECADGPSEPCKFQEPENN- 216

Query: 787  KTAMNREDLKAKRKMHKQQVKAENRNRRMQQVTGREYHHKKDAINSSTYCSPSMDVEGTI 966
                 ++  KA RK HK+ VK E+R + M    G +    ++ I+S    SPS+      
Sbjct: 217  NADFAKDGKKALRKEHKRLVKKESREKLM----GAKSEESRN-IHSIDVPSPSLK----- 266

Query: 967  TSLQADGIPKTKSKHRSKREHVAG 1038
                     K K   ++KREH+ G
Sbjct: 267  --------GKFKKGWKTKREHLEG 282


>ref|XP_001698520.1| hypothetical protein CHLREDRAFT_187651 [Chlamydomonas reinhardtii]
           gi|158282260|gb|EDP08013.1| predicted protein
           [Chlamydomonas reinhardtii]
          Length = 266

 Score = 70.9 bits (172), Expect = 1e-09
 Identities = 47/157 (29%), Positives = 75/157 (47%)
 Frame = +1

Query: 37  HSTNEGVGCGMENVPDAVLQNVMLPKMGSSELGALACCSRRMCGLATQDHLWRPLFNSHF 216
           H+T+E     +  +P  +L N +LP + + ++  LA C R +  +A  D +W+P   +  
Sbjct: 18  HATDEAPDY-LALLPVPLLLNSVLPLLAAPDVLRLAACCRTLKEVAFADDVWQPRCKARS 76

Query: 217 NMSYLFRRYYNHVDCTDSAPPPRPWLSWHRAFCYHQSIRCSECNEHTPYVFTLLPSHVRL 396
                + R Y               +SW   +   +   C EC + + YVF LL    RL
Sbjct: 77  -----WERQYRG-------------MSWQECYTARRRTLCVECGQASRYVFALLSC--RL 116

Query: 397 CERCELSNPKYSLVTELEAKTRYYLNDEELKNLPFKE 507
           CE+CE ++P+Y LVT LEA  RY +    L  +P+ E
Sbjct: 117 CEKCEHASPRYGLVTALEAAERYGVPYTALGGVPYHE 153


Top