BLASTX nr result
ID: Ephedra28_contig00021013
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00021013
(850 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK26948.1| unknown [Picea sitchensis] gi|294463305|gb|ADE771... 85 4e-14
gb|EMT00899.1| DNA replication complex GINS protein PSF2 [Aegilo... 64 7e-08
ref|XP_003565172.1| PREDICTED: DNA replication complex GINS prot... 64 7e-08
ref|XP_004958801.1| PREDICTED: DNA replication complex GINS prot... 64 9e-08
ref|XP_004958800.1| PREDICTED: DNA replication complex GINS prot... 64 9e-08
ref|XP_002463445.1| hypothetical protein SORBIDRAFT_02g043990 [S... 64 9e-08
ref|XP_002273656.1| PREDICTED: DNA replication complex GINS prot... 64 9e-08
gb|EEE54233.1| hypothetical protein OsJ_01101 [Oryza sativa Japo... 64 9e-08
gb|EEC70314.1| hypothetical protein OsI_01171 [Oryza sativa Indi... 64 9e-08
ref|NP_001042585.1| Os01g0248600 [Oryza sativa Japonica Group] g... 64 9e-08
gb|AAD38294.1|AC007789_20 unknown protein [Oryza sativa Japonica... 64 9e-08
ref|XP_001768246.1| predicted protein [Physcomitrella patens] gi... 63 2e-07
ref|XP_006643993.1| PREDICTED: DNA replication complex GINS prot... 62 2e-07
tpg|DAA64255.1| TPA: hypothetical protein ZEAMMB73_344417 [Zea m... 62 2e-07
gb|ACN36583.1| unknown [Zea mays] gi|414888243|tpg|DAA64257.1| T... 62 2e-07
gb|ACG26223.1| DNA replication complex GINS protein PSF2 [Zea mays] 62 2e-07
ref|NP_001147013.1| LOC100280623 [Zea mays] gi|195606464|gb|ACG2... 62 2e-07
gb|ACF82972.1| unknown [Zea mays] gi|195626926|gb|ACG35293.1| DN... 62 2e-07
ref|XP_002457161.1| hypothetical protein SORBIDRAFT_03g002410 [S... 62 3e-07
gb|AFK39012.1| unknown [Medicago truncatula] 60 8e-07
>gb|ABK26948.1| unknown [Picea sitchensis] gi|294463305|gb|ADE77188.1| unknown
[Picea sitchensis]
Length = 208
Score = 84.7 bits (208), Expect = 4e-14
Identities = 42/48 (87%), Positives = 44/48 (91%)
Frame = +1
Query: 1 SRTHAVKLKNLSAMEVNLVRPFIVRALQTFFKHDTEDEQLSAANSQST 144
SRTHAVKLKNLSAMEVNLVRPFIVRALQTF+KHDT DEQ+S NSQ T
Sbjct: 148 SRTHAVKLKNLSAMEVNLVRPFIVRALQTFYKHDTGDEQVSDGNSQPT 195
>gb|EMT00899.1| DNA replication complex GINS protein PSF2 [Aegilops tauschii]
Length = 292
Score = 63.9 bits (154), Expect = 7e-08
Identities = 32/49 (65%), Positives = 38/49 (77%), Gaps = 2/49 (4%)
Frame = +1
Query: 4 RTHAVKLKNLSAMEVNLVRPFIVRALQTFFKHDTED--EQLSAANSQST 144
RTHAVKLKNLSAMEVN+VRPF+VR LQ F+KHD+ +Q S+ST
Sbjct: 149 RTHAVKLKNLSAMEVNIVRPFMVRTLQAFYKHDSPQMIQQADNTGSRST 197
>ref|XP_003565172.1| PREDICTED: DNA replication complex GINS protein PSF2-like
[Brachypodium distachyon]
Length = 212
Score = 63.9 bits (154), Expect = 7e-08
Identities = 31/47 (65%), Positives = 37/47 (78%)
Frame = +1
Query: 4 RTHAVKLKNLSAMEVNLVRPFIVRALQTFFKHDTEDEQLSAANSQST 144
RTHAVKLKNLSAMEVN+VRPF+VR LQ F+KHD+ A N+ S+
Sbjct: 149 RTHAVKLKNLSAMEVNIVRPFMVRTLQAFYKHDSPQMIQQADNTGSS 195
>ref|XP_004958801.1| PREDICTED: DNA replication complex GINS protein PSF2-like isoform
X2 [Setaria italica]
Length = 211
Score = 63.5 bits (153), Expect = 9e-08
Identities = 31/46 (67%), Positives = 36/46 (78%)
Frame = +1
Query: 4 RTHAVKLKNLSAMEVNLVRPFIVRALQTFFKHDTEDEQLSAANSQS 141
RTHAVKLKNLSAMEVN+VRPF+VR LQ F+KHD+ A N+ S
Sbjct: 149 RTHAVKLKNLSAMEVNIVRPFMVRTLQAFYKHDSPQMIQQADNTGS 194
>ref|XP_004958800.1| PREDICTED: DNA replication complex GINS protein PSF2-like isoform
X1 [Setaria italica]
Length = 238
Score = 63.5 bits (153), Expect = 9e-08
Identities = 31/46 (67%), Positives = 36/46 (78%)
Frame = +1
Query: 4 RTHAVKLKNLSAMEVNLVRPFIVRALQTFFKHDTEDEQLSAANSQS 141
RTHAVKLKNLSAMEVN+VRPF+VR LQ F+KHD+ A N+ S
Sbjct: 176 RTHAVKLKNLSAMEVNIVRPFMVRTLQAFYKHDSPQMIQQADNTGS 221
>ref|XP_002463445.1| hypothetical protein SORBIDRAFT_02g043990 [Sorghum bicolor]
gi|241926822|gb|EER99966.1| hypothetical protein
SORBIDRAFT_02g043990 [Sorghum bicolor]
Length = 211
Score = 63.5 bits (153), Expect = 9e-08
Identities = 31/46 (67%), Positives = 36/46 (78%)
Frame = +1
Query: 4 RTHAVKLKNLSAMEVNLVRPFIVRALQTFFKHDTEDEQLSAANSQS 141
RTHAVKLKNLSAMEVN+VRPF+VR LQ F+KHD+ A N+ S
Sbjct: 149 RTHAVKLKNLSAMEVNIVRPFMVRTLQAFYKHDSPQMIQQADNTGS 194
>ref|XP_002273656.1| PREDICTED: DNA replication complex GINS protein PSF2 [Vitis
vinifera] gi|297737295|emb|CBI26496.3| unnamed protein
product [Vitis vinifera]
Length = 210
Score = 63.5 bits (153), Expect = 9e-08
Identities = 28/36 (77%), Positives = 33/36 (91%)
Frame = +1
Query: 4 RTHAVKLKNLSAMEVNLVRPFIVRALQTFFKHDTED 111
RTHAVKLKNLSAME N+VRPF+VRALQ F+KHD+ +
Sbjct: 149 RTHAVKLKNLSAMEANIVRPFVVRALQAFYKHDSPE 184
>gb|EEE54233.1| hypothetical protein OsJ_01101 [Oryza sativa Japonica Group]
Length = 224
Score = 63.5 bits (153), Expect = 9e-08
Identities = 31/46 (67%), Positives = 36/46 (78%)
Frame = +1
Query: 4 RTHAVKLKNLSAMEVNLVRPFIVRALQTFFKHDTEDEQLSAANSQS 141
RTHAVKLKNLSAMEVN+VRPF+VR LQ F+KHD+ A N+ S
Sbjct: 162 RTHAVKLKNLSAMEVNIVRPFMVRTLQAFYKHDSPQMIQQADNTGS 207
>gb|EEC70314.1| hypothetical protein OsI_01171 [Oryza sativa Indica Group]
Length = 224
Score = 63.5 bits (153), Expect = 9e-08
Identities = 31/46 (67%), Positives = 36/46 (78%)
Frame = +1
Query: 4 RTHAVKLKNLSAMEVNLVRPFIVRALQTFFKHDTEDEQLSAANSQS 141
RTHAVKLKNLSAMEVN+VRPF+VR LQ F+KHD+ A N+ S
Sbjct: 162 RTHAVKLKNLSAMEVNIVRPFMVRTLQAFYKHDSPQMIQQADNTGS 207
>ref|NP_001042585.1| Os01g0248600 [Oryza sativa Japonica Group]
gi|11320850|dbj|BAB18333.1| putative DNA replication
complex GINS protein PSF2 [Oryza sativa Japonica Group]
gi|113532116|dbj|BAF04499.1| Os01g0248600 [Oryza sativa
Japonica Group] gi|215686405|dbj|BAG87690.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|215704757|dbj|BAG94785.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 211
Score = 63.5 bits (153), Expect = 9e-08
Identities = 31/46 (67%), Positives = 36/46 (78%)
Frame = +1
Query: 4 RTHAVKLKNLSAMEVNLVRPFIVRALQTFFKHDTEDEQLSAANSQS 141
RTHAVKLKNLSAMEVN+VRPF+VR LQ F+KHD+ A N+ S
Sbjct: 149 RTHAVKLKNLSAMEVNIVRPFMVRTLQAFYKHDSPQMIQQADNTGS 194
>gb|AAD38294.1|AC007789_20 unknown protein [Oryza sativa Japonica Group]
Length = 276
Score = 63.5 bits (153), Expect = 9e-08
Identities = 31/46 (67%), Positives = 36/46 (78%)
Frame = +1
Query: 4 RTHAVKLKNLSAMEVNLVRPFIVRALQTFFKHDTEDEQLSAANSQS 141
RTHAVKLKNLSAMEVN+VRPF+VR LQ F+KHD+ A N+ S
Sbjct: 149 RTHAVKLKNLSAMEVNIVRPFMVRTLQAFYKHDSPQMIQQADNTGS 194
>ref|XP_001768246.1| predicted protein [Physcomitrella patens]
gi|162680424|gb|EDQ66860.1| predicted protein
[Physcomitrella patens]
Length = 194
Score = 62.8 bits (151), Expect = 2e-07
Identities = 33/50 (66%), Positives = 40/50 (80%), Gaps = 3/50 (6%)
Frame = +1
Query: 4 RTHAVKLKNLSAMEVNLVRPFIVRALQTFFKHDTED---EQLSAANSQST 144
RTHAVKLKNLSAMEVN +R F VRALQ+FFKHD +D + + ++SQST
Sbjct: 130 RTHAVKLKNLSAMEVNRMRTFTVRALQSFFKHDNDDMMKQTPTDSDSQST 179
>ref|XP_006643993.1| PREDICTED: DNA replication complex GINS protein PSF2-like [Oryza
brachyantha]
Length = 211
Score = 62.4 bits (150), Expect = 2e-07
Identities = 28/34 (82%), Positives = 32/34 (94%)
Frame = +1
Query: 4 RTHAVKLKNLSAMEVNLVRPFIVRALQTFFKHDT 105
RTHAVKLKNLSAMEVN+VRPF+VR LQ F+KHD+
Sbjct: 149 RTHAVKLKNLSAMEVNIVRPFMVRTLQAFYKHDS 182
>tpg|DAA64255.1| TPA: hypothetical protein ZEAMMB73_344417 [Zea mays]
Length = 202
Score = 62.4 bits (150), Expect = 2e-07
Identities = 28/34 (82%), Positives = 32/34 (94%)
Frame = +1
Query: 4 RTHAVKLKNLSAMEVNLVRPFIVRALQTFFKHDT 105
RTHAVKLKNLSAMEVN+VRPF+VR LQ F+KHD+
Sbjct: 140 RTHAVKLKNLSAMEVNIVRPFMVRTLQAFYKHDS 173
>gb|ACN36583.1| unknown [Zea mays] gi|414888243|tpg|DAA64257.1| TPA: hypothetical
protein ZEAMMB73_344417 [Zea mays]
Length = 237
Score = 62.4 bits (150), Expect = 2e-07
Identities = 28/34 (82%), Positives = 32/34 (94%)
Frame = +1
Query: 4 RTHAVKLKNLSAMEVNLVRPFIVRALQTFFKHDT 105
RTHAVKLKNLSAMEVN+VRPF+VR LQ F+KHD+
Sbjct: 149 RTHAVKLKNLSAMEVNIVRPFMVRTLQAFYKHDS 182
>gb|ACG26223.1| DNA replication complex GINS protein PSF2 [Zea mays]
Length = 205
Score = 62.4 bits (150), Expect = 2e-07
Identities = 28/34 (82%), Positives = 32/34 (94%)
Frame = +1
Query: 4 RTHAVKLKNLSAMEVNLVRPFIVRALQTFFKHDT 105
RTHAVKLKNLSAMEVN+VRPF+VR LQ F+KHD+
Sbjct: 143 RTHAVKLKNLSAMEVNIVRPFMVRTLQAFYKHDS 176
>ref|NP_001147013.1| LOC100280623 [Zea mays] gi|195606464|gb|ACG25062.1| DNA replication
complex GINS protein PSF2 [Zea mays]
Length = 211
Score = 62.4 bits (150), Expect = 2e-07
Identities = 28/34 (82%), Positives = 32/34 (94%)
Frame = +1
Query: 4 RTHAVKLKNLSAMEVNLVRPFIVRALQTFFKHDT 105
RTHAVKLKNLSAMEVN+VRPF+VR LQ F+KHD+
Sbjct: 149 RTHAVKLKNLSAMEVNIVRPFMVRTLQAFYKHDS 182
>gb|ACF82972.1| unknown [Zea mays] gi|195626926|gb|ACG35293.1| DNA replication
complex GINS protein PSF2 [Zea mays]
gi|414888244|tpg|DAA64258.1| TPA: DNA replication
complex GINS protein PSF2 [Zea mays]
Length = 211
Score = 62.4 bits (150), Expect = 2e-07
Identities = 28/34 (82%), Positives = 32/34 (94%)
Frame = +1
Query: 4 RTHAVKLKNLSAMEVNLVRPFIVRALQTFFKHDT 105
RTHAVKLKNLSAMEVN+VRPF+VR LQ F+KHD+
Sbjct: 149 RTHAVKLKNLSAMEVNIVRPFMVRTLQAFYKHDS 182
>ref|XP_002457161.1| hypothetical protein SORBIDRAFT_03g002410 [Sorghum bicolor]
gi|241929136|gb|EES02281.1| hypothetical protein
SORBIDRAFT_03g002410 [Sorghum bicolor]
Length = 211
Score = 62.0 bits (149), Expect = 3e-07
Identities = 28/33 (84%), Positives = 31/33 (93%)
Frame = +1
Query: 4 RTHAVKLKNLSAMEVNLVRPFIVRALQTFFKHD 102
RTHAVKLKNLSAMEVN+VRPF+VR LQ F+KHD
Sbjct: 149 RTHAVKLKNLSAMEVNIVRPFMVRTLQAFYKHD 181
>gb|AFK39012.1| unknown [Medicago truncatula]
Length = 210
Score = 60.5 bits (145), Expect = 8e-07
Identities = 28/36 (77%), Positives = 32/36 (88%)
Frame = +1
Query: 4 RTHAVKLKNLSAMEVNLVRPFIVRALQTFFKHDTED 111
RT AVK+KNLSAMEVN+VRPFI RALQ F+KHD+ D
Sbjct: 149 RTFAVKIKNLSAMEVNIVRPFIGRALQAFYKHDSSD 184