BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00020961
         (1210 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006853512.1| hypothetical protein AMTR_s00032p00220610 [A...   312   2e-82
emb|CBI34146.3| unnamed protein product [Vitis vinifera]              284   6e-74
ref|XP_002264236.1| PREDICTED: probable E3 ubiquitin-protein lig...   282   2e-73
gb|EMJ18598.1| hypothetical protein PRUPE_ppa025403mg [Prunus pe...   277   5e-72
ref|XP_004957638.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...   276   9e-72
ref|XP_003578646.1| PREDICTED: probable E3 ubiquitin-protein lig...   274   5e-71
dbj|BAJ93728.1| predicted protein [Hordeum vulgare subsp. vulgare]    273   8e-71
ref|XP_002460662.1| hypothetical protein SORBIDRAFT_02g032760 [S...   273   1e-70
ref|XP_004146002.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...   273   1e-70
ref|XP_002510629.1| guanine nucleotide exchange factor P532, put...   272   2e-70
gb|ACF84924.1| unknown [Zea mays] gi|414886543|tpg|DAA62557.1| T...   272   2e-70
gb|EMS58189.1| hypothetical protein TRIUR3_10602 [Triticum urartu]    270   7e-70
ref|XP_003530841.1| PREDICTED: probable E3 ubiquitin-protein lig...   270   7e-70
ref|NP_001144762.1| uncharacterized protein LOC100277821 [Zea ma...   270   7e-70
gb|ESW12739.1| hypothetical protein PHAVU_008G138200g [Phaseolus...   269   1e-69
ref|XP_004306294.1| PREDICTED: probable E3 ubiquitin-protein lig...   269   1e-69
ref|XP_004166250.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...   269   1e-69
ref|XP_006660975.1| PREDICTED: probable E3 ubiquitin-protein lig...   268   4e-69
ref|XP_006383819.1| hypothetical protein POPTR_0004s00240g [Popu...   267   7e-69
ref|XP_002331537.1| predicted protein [Populus trichocarpa]           267   7e-69

>ref|XP_006853512.1| hypothetical protein AMTR_s00032p00220610 [Amborella trichopoda]
           gi|548857165|gb|ERN14979.1| hypothetical protein
           AMTR_s00032p00220610 [Amborella trichopoda]
          Length = 444

 Score =  312 bits (800), Expect = 2e-82
 Identities = 144/241 (59%), Positives = 180/241 (74%)
 Frame = +3

Query: 3   WNGKITYISTSGAHTAAVTESGELYTWXXXXXXXXXXXXXXXXPDEGASGKPLKVRALSV 182
           W+GKI +++TSG HTAA++++GELYTW                PDEGA G P +V AL V
Sbjct: 197 WSGKICHLATSGTHTAAISDAGELYTWGRDEGEGRLGLGTGGGPDEGALGTPSRVDALPV 256

Query: 183 PVIASCCGGFFSLALTKDGQVWSWGGNENFELGRGTAKNDWRPRPIPALDGVNVIQISCG 362
           PV A  CGGFF++ALT DGQ+WSWGGN NFELGRG   NDWRP+P+P+LDGV +IQI+ G
Sbjct: 257 PVAAVTCGGFFTMALTTDGQLWSWGGNSNFELGRGNNINDWRPQPVPSLDGVRIIQIASG 316

Query: 363 GYHSLVLTDDGKVYTWXXXXXXXXXXXSVKNEKVPRVVESLADENVVYVACGSMCSSAVT 542
           G+HS+ LTDDGKV TW           S++N+KVP VVE+LADE ++YVACG   S+A+T
Sbjct: 317 GFHSMALTDDGKVLTWGHGRHGQLGHGSIQNQKVPVVVEALADEKLIYVACGGSSSAAIT 376

Query: 543 DSGKLYMWGKGRDTQLGVPGVLDIQAVPVLVDFLVDNEELGPPHVNAVAAGASHAMCLLS 722
           +SGKLYMWG  +D QLGVPG+ ++Q +PV V F+VD+E+LGPPHV  VA GASHAMCLLS
Sbjct: 377 ESGKLYMWGNSKDCQLGVPGLPEVQTLPVEVKFVVDDEKLGPPHVLLVAIGASHAMCLLS 436

Query: 723 R 725
           R
Sbjct: 437 R 437



 Score = 75.1 bits (183), Expect = 5e-11
 Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 14/171 (8%)
 Frame = +3

Query: 159 LKVRALSVPVIASCCGGFFSLALTKDGQVWSWGGNENFELGRGTAKNDWRPRPIPALDGV 338
           L   A  V    SC  G F   L  +G++W WG  +   LG G+  + + P   P L+ +
Sbjct: 92  LSSEASLVEAGVSC--GLFHSGLLVEGKLWVWGKGDGGRLGLGSEMSAYVPMLNPHLESL 149

Query: 339 NVIQISCGGYHSLVLTDDGKVYTWXXXXXXXXXXXSVKNEKVPRVVESLADENVVYVACG 518
            ++ +  GG HS  LT +G+V+TW               E  PR VE+     + ++A  
Sbjct: 150 RMVAL--GGLHSTALTMEGRVFTWGYGGFGALGHSVYHRELSPRQVENAWSGKICHLATS 207

Query: 519 SMCSSAVTDSGKLYMWGK----GR----------DTQLGVPGVLDIQAVPV 629
              ++A++D+G+LY WG+    GR          +  LG P  +D   VPV
Sbjct: 208 GTHTAAISDAGELYTWGRDEGEGRLGLGTGGGPDEGALGTPSRVDALPVPV 258


>emb|CBI34146.3| unnamed protein product [Vitis vinifera]
          Length = 329

 Score =  284 bits (726), Expect = 6e-74
 Identities = 131/243 (53%), Positives = 174/243 (71%), Gaps = 1/243 (0%)
 Frame = +3

Query: 3   WNGKITYISTSGAHTAAVTESGELYTWXXXXXXXXXXXXXXXXPDEGAS-GKPLKVRALS 179
           WN KI +I+T+G HTAA+TESGELYTW                P+EG     P KV+AL 
Sbjct: 85  WNAKIRHIATAGTHTAAITESGELYTWGRDQGDGRLGLGPNCGPNEGGGLSIPSKVKALP 144

Query: 180 VPVIASCCGGFFSLALTKDGQVWSWGGNENFELGRGTAKNDWRPRPIPALDGVNVIQISC 359
           VPV A  CGGFF++ LT++GQ+W+WG N N+ELGRG     W+P+PIP+L  V +IQI+ 
Sbjct: 145 VPVAAVSCGGFFTMVLTQEGQLWNWGANSNYELGRGDKVGGWKPQPIPSLQDVRIIQIAS 204

Query: 360 GGYHSLVLTDDGKVYTWXXXXXXXXXXXSVKNEKVPRVVESLADENVVYVACGSMCSSAV 539
           GGYHSL LTDDGKV +W           S++N+K+P V+E+LADE+V+Y+ACG   S+A+
Sbjct: 205 GGYHSLALTDDGKVLSWGYGQHGQLGHSSIENQKIPTVIEALADEHVIYIACGGSSSAAI 264

Query: 540 TDSGKLYMWGKGRDTQLGVPGVLDIQAVPVLVDFLVDNEELGPPHVNAVAAGASHAMCLL 719
           TD+GKLYMWG  +D+QLGVPG+ + Q +PV V FL++++ LGP +V +VA GASHAMCL+
Sbjct: 265 TDNGKLYMWGNAKDSQLGVPGLPETQPLPVEVKFLMEDDRLGPHNVLSVAVGASHAMCLV 324

Query: 720 SRS 728
           SRS
Sbjct: 325 SRS 327


>ref|XP_002264236.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Vitis
            vinifera]
          Length = 489

 Score =  282 bits (721), Expect = 2e-73
 Identities = 139/279 (49%), Positives = 186/279 (66%), Gaps = 7/279 (2%)
 Frame = +3

Query: 3    WNGKITYISTSGAHTAAVTESGELYTWXXXXXXXXXXXXXXXXPDEGAS-GKPLKVRALS 179
            WN KI +I+T+G HTAA+TESGELYTW                P+EG     P KV+AL 
Sbjct: 190  WNAKIRHIATAGTHTAAITESGELYTWGRDQGDGRLGLGPNCGPNEGGGLSIPSKVKALP 249

Query: 180  VPVIASCCGGFFSLALTKDGQVWSWGGNENFELGRGTAKNDWRPRPIPALDGVNVIQISC 359
            VPV A  CGGFF++ LT++GQ+W+WG N N+ELGRG     W+P+PIP+L  V +IQI+ 
Sbjct: 250  VPVAAVSCGGFFTMVLTQEGQLWNWGANSNYELGRGDKVGGWKPQPIPSLQDVRIIQIAS 309

Query: 360  GGYHSLVLTDDGKVYTWXXXXXXXXXXXSVKNEKVPRVVESLADENVVYVACGSMCSSAV 539
            GGYHSL LTDDGKV +W           S++N+K+P V+E+LADE+V+Y+ACG   S+A+
Sbjct: 310  GGYHSLALTDDGKVLSWGYGQHGQLGHSSIENQKIPTVIEALADEHVIYIACGGSSSAAI 369

Query: 540  TDSGKLYMWGKGRDTQLGVPGVLDIQAVPVLVDFLVDNEELGPPHVNAVAAGASHAMCLL 719
            TD+GKLYMWG  +D+QLGVPG+ + Q +PV V FL++++ LGP +V +VA GASHAMCL+
Sbjct: 370  TDNGKLYMWGNAKDSQLGVPGLPETQPLPVEVKFLMEDDRLGPHNVLSVAVGASHAMCLV 429

Query: 720  SRSPR*EFDHTHLLHNIRSL*IGDMISSV------TCWW 818
            S          HLL N+ SL + + I+S         WW
Sbjct: 430  S-----SLCLFHLLPNL-SLYMDESIASAAVTFTFVVWW 462



 Score = 75.1 bits (183), Expect = 5e-11
 Identities = 47/156 (30%), Positives = 75/156 (48%), Gaps = 1/156 (0%)
 Frame = +3

Query: 132 PDEGASGKPLKVRALSVPVIASCCGGFFSLALTKDGQVWSWGGNENFELGRGTAKNDWRP 311
           P  G    P    A  +  +   CG F S +L  DG++W WG  +   LG G     + P
Sbjct: 75  PIPGRLCLPSVENASGLTEVGISCGLFHS-SLVVDGKLWIWGKGDGGRLGFGQEYPAFLP 133

Query: 312 RPIPALDGVNVIQISCGGYHSLVLTDDGKVYTWXXXXXXXXXXXSVKNEKVPRVVESLAD 491
              P LD +     + GG HS+ L+  G+V+TW               E +PR+VE   +
Sbjct: 134 TLNPNLDSIR--STALGGVHSVALSSLGQVFTWGYGGFGALGHSVYHRELLPRMVEGSWN 191

Query: 492 ENVVYVACGSMCSSAVTDSGKLYMWGKGR-DTQLGV 596
             + ++A     ++A+T+SG+LY WG+ + D +LG+
Sbjct: 192 AKIRHIATAGTHTAAITESGELYTWGRDQGDGRLGL 227


>gb|EMJ18598.1| hypothetical protein PRUPE_ppa025403mg [Prunus persica]
          Length = 494

 Score =  277 bits (709), Expect = 5e-72
 Identities = 130/243 (53%), Positives = 170/243 (69%), Gaps = 1/243 (0%)
 Frame = +3

Query: 3   WNGKITYISTSGAHTAAVTESGELYTWXXXXXXXXXXXXXXXXPDEGAS-GKPLKVRALS 179
           W+GKI +ISTSG HTAA+T+SGELYTW                P+EG     P KV+AL 
Sbjct: 213 WSGKIHHISTSGTHTAAITKSGELYTWGRDEGDGRLGLGPNRGPNEGGGLSIPSKVKALP 272

Query: 180 VPVIASCCGGFFSLALTKDGQVWSWGGNENFELGRGTAKNDWRPRPIPALDGVNVIQISC 359
           VP  A  CGGFF++ LT+DG++W+WG N N+ELGRG     W+P+P+P+L GV +IQI  
Sbjct: 273 VPAAAVSCGGFFTMVLTEDGELWNWGANSNYELGRGNKVGGWQPKPVPSLVGVRIIQIES 332

Query: 360 GGYHSLVLTDDGKVYTWXXXXXXXXXXXSVKNEKVPRVVESLADENVVYVACGSMCSSAV 539
           GGYHSL LTD+GKV +W           S++++K P VVE+L DE V+Y+ACG   S+A+
Sbjct: 333 GGYHSLALTDEGKVLSWGHGGHGQLGNSSIQSQKTPTVVEALTDERVIYIACGGSSSAAI 392

Query: 540 TDSGKLYMWGKGRDTQLGVPGVLDIQAVPVLVDFLVDNEELGPPHVNAVAAGASHAMCLL 719
           TD GKLYMWG  +D+QLGVPG+ +IQ  PV V FL++++ LGP +V +VA GASHAMCL+
Sbjct: 393 TDKGKLYMWGNTKDSQLGVPGLPEIQPSPVEVKFLMEDDGLGPHNVLSVAVGASHAMCLV 452

Query: 720 SRS 728
           SRS
Sbjct: 453 SRS 455



 Score = 73.9 bits (180), Expect = 1e-10
 Identities = 46/141 (32%), Positives = 69/141 (48%), Gaps = 1/141 (0%)
 Frame = +3

Query: 177 SVPVIASCCGGFFSLALTKDGQVWSWGGNENFELGRGTAKNDWRPRPIPALDGVNVIQIS 356
           SV  +   CG F S +L  D ++W WG  +   LG G   + + P   P LD V  + + 
Sbjct: 113 SVVEVGISCGLFHS-SLLVDEKLWIWGKGDGGRLGFGHENSLFLPTLNPHLDSVRFVAL- 170

Query: 357 CGGYHSLVLTDDGKVYTWXXXXXXXXXXXSVKNEKVPRVVESLADENVVYVACGSMCSSA 536
            GG HS+ LT  G+VYTW               E  PR+VE      + +++     ++A
Sbjct: 171 -GGLHSVALTSLGQVYTWGYGGFGALGHSVYTRELFPRLVEGSWSGKIHHISTSGTHTAA 229

Query: 537 VTDSGKLYMWGKGR-DTQLGV 596
           +T SG+LY WG+   D +LG+
Sbjct: 230 ITKSGELYTWGRDEGDGRLGL 250


>ref|XP_004957638.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Setaria italica]
          Length = 432

 Score =  276 bits (707), Expect = 9e-72
 Identities = 128/242 (52%), Positives = 173/242 (71%), Gaps = 2/242 (0%)
 Frame = +3

Query: 3   WNGKITYISTSGAHTAAVTESGELYTWXXXXXXXXXXXXXXXXPDE-GASGKPLKVRALS 179
           W+G IT+I+TSGAHTAA+T+SGELYTW                P E G+   P KV AL 
Sbjct: 185 WDGNITHIATSGAHTAAITDSGELYTWGRDEGDGRLGLGSGGGPGEAGSLSVPSKVNALP 244

Query: 180 VPVIASCCGGFFSLALTKDGQVWSWGGNENFELGRGTAKNDWRPRPIPALDGVNVIQISC 359
           VPV A  CGGFF++ALT DGQ+WSWG N NFELGRG+  +DW+P+ +P+L  + VIQ++C
Sbjct: 245 VPVAAVACGGFFTMALTSDGQLWSWGANSNFELGRGSNSSDWKPQLVPSLKNIRVIQVAC 304

Query: 360 GGYHSLVLTDDGKVYTWXXXXXXXXXXXSVKNEKVPRVVESLADENVVYVACGSMCSSAV 539
           GGYHSL LTD+G+V +W           +++N +VP  +++L++E +VY+ACG   S+A+
Sbjct: 305 GGYHSLALTDEGEVLSWGHGGHGQLGHPTLQNHRVPLSIKALSEERIVYIACGGSTSAAI 364

Query: 540 TDSGKLYMWGKGRDTQLGVPGVLDIQAVPVLVDFLVD-NEELGPPHVNAVAAGASHAMCL 716
           ++ G LYMWG  RD QLGVPG+ ++Q +PV V+FL D +E+LGPPHV +VA GASHAMCL
Sbjct: 365 SEKGDLYMWGNARDCQLGVPGLPEVQPLPVKVNFLRDGDEDLGPPHVISVAIGASHAMCL 424

Query: 717 LS 722
           +S
Sbjct: 425 VS 426



 Score = 85.9 bits (211), Expect = 3e-14
 Identities = 63/187 (33%), Positives = 86/187 (45%), Gaps = 6/187 (3%)
 Frame = +3

Query: 180 VPVIASCCGGFFSLALTKDGQVWSWGGNENFELGRGTAKNDWRPRPIPALDGVNVIQISC 359
           V V  SC  G F  AL  +G  W WG  +   LG G   + + PR  P L  + ++ +  
Sbjct: 87  VEVGISC--GLFHSALLVEGGAWVWGKGDGGRLGLGDESSAFVPRHNPNLRELRLLAL-- 142

Query: 360 GGYHSLVLTDDGKVYTWXXXXXXXXXXXSVKNEKVPRVVESLADENVVYVACGSMCSSAV 539
           GG HS  LT  G V+TW               E +PR V+   D N+ ++A     ++A+
Sbjct: 143 GGIHSAALTASGDVFTWGYGGFGALGHYVYHRELLPRQVKGPWDGNITHIATSGAHTAAI 202

Query: 540 TDSGKLYMWGKGR-DTQLGV-----PGVLDIQAVPVLVDFLVDNEELGPPHVNAVAAGAS 701
           TDSG+LY WG+   D +LG+     PG     +VP  V+ L       P  V AVA G  
Sbjct: 203 TDSGELYTWGRDEGDGRLGLGSGGGPGEAGSLSVPSKVNAL-------PVPVAAVACGGF 255

Query: 702 HAMCLLS 722
             M L S
Sbjct: 256 FTMALTS 262


>ref|XP_003578646.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
           [Brachypodium distachyon]
          Length = 432

 Score =  274 bits (701), Expect = 5e-71
 Identities = 127/243 (52%), Positives = 170/243 (69%), Gaps = 2/243 (0%)
 Frame = +3

Query: 3   WNGKITYISTSGAHTAAVTESGELYTWXXXXXXXXXXXXXXXXPDE-GASGKPLKVRALS 179
           W GKI++I+TSGAHTAA+T+SGELYTW                P E G+   P KV AL 
Sbjct: 185 WEGKISHIATSGAHTAAITDSGELYTWGRDEGDGRLGLGSGGGPGEAGSLSVPSKVNALP 244

Query: 180 VPVIASCCGGFFSLALTKDGQVWSWGGNENFELGRGTAKNDWRPRPIPALDGVNVIQISC 359
           VPV A  CGGFF++ALT +GQ+WSWG N NFELGRG+  +DWRP+ +P+L  + V+Q++C
Sbjct: 245 VPVAAVACGGFFTIALTSEGQLWSWGANSNFELGRGSNSSDWRPQLVPSLKNIRVVQVAC 304

Query: 360 GGYHSLVLTDDGKVYTWXXXXXXXXXXXSVKNEKVPRVVESLADENVVYVACGSMCSSAV 539
           GGYHSL LTD+G+V +W           +++N +VP  +++L+ E +VY+ACG   S+A+
Sbjct: 305 GGYHSLALTDEGEVLSWGHGGHGQLGHPAIQNHRVPLAIKALSGERIVYIACGGSTSAAI 364

Query: 540 TDSGKLYMWGKGRDTQLGVPGVLDIQAVPVLVDFLVD-NEELGPPHVNAVAAGASHAMCL 716
           +D G LYMWG  RD QLGVP + ++Q +PV V+FL D +E+  PPHV +VA GASHAMCL
Sbjct: 365 SDKGDLYMWGNARDCQLGVPDLPEVQPLPVKVNFLADGDEDPSPPHVISVAIGASHAMCL 424

Query: 717 LSR 725
           LSR
Sbjct: 425 LSR 427



 Score = 81.6 bits (200), Expect = 6e-13
 Identities = 61/195 (31%), Positives = 85/195 (43%), Gaps = 6/195 (3%)
 Frame = +3

Query: 156 PLKVRALSVPVIASCCGGFFSLALTKDGQVWSWGGNENFELGRGTAKNDWRPRPIPALDG 335
           P       + V  SC  G F  AL  DG  W WG  +   LG G   + + PR  P L  
Sbjct: 79  PAAAETSGLEVGISC--GLFHSALLVDGGTWVWGKGDGGRLGLGDESSAFVPRANPNLSD 136

Query: 336 VNVIQISCGGYHSLVLTDDGKVYTWXXXXXXXXXXXSVKNEKVPRVVESLADENVVYVAC 515
           + V+ +  GG HS  LT  G V+TW               E +P+ V    +  + ++A 
Sbjct: 137 LRVLAL--GGIHSASLTASGDVFTWGYGGFGALGHYVYHRELLPKKVNGPWEGKISHIAT 194

Query: 516 GSMCSSAVTDSGKLYMWGKGR-DTQLGV-----PGVLDIQAVPVLVDFLVDNEELGPPHV 677
               ++A+TDSG+LY WG+   D +LG+     PG     +VP  V+ L       P  V
Sbjct: 195 SGAHTAAITDSGELYTWGRDEGDGRLGLGSGGGPGEAGSLSVPSKVNAL-------PVPV 247

Query: 678 NAVAAGASHAMCLLS 722
            AVA G    + L S
Sbjct: 248 AAVACGGFFTIALTS 262


>dbj|BAJ93728.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 439

 Score =  273 bits (699), Expect = 8e-71
 Identities = 129/243 (53%), Positives = 170/243 (69%), Gaps = 2/243 (0%)
 Frame = +3

Query: 3   WNGKITYISTSGAHTAAVTESGELYTWXXXXXXXXXXXXXXXXPDE-GASGKPLKVRALS 179
           W GKI +I+TSGAHTAA+TESGELYTW                P E G+   P KV AL 
Sbjct: 192 WEGKIVHIATSGAHTAAITESGELYTWGRDEGDGRLGLGSGGGPGEAGSLSVPSKVSALP 251

Query: 180 VPVIASCCGGFFSLALTKDGQVWSWGGNENFELGRGTAKNDWRPRPIPALDGVNVIQISC 359
           VPV A  CGGFF+LALT DGQ+WSWG N NFELGRG+  +DWRP+ +P+L  V+VIQ++C
Sbjct: 252 VPVAAVACGGFFTLALTSDGQLWSWGANSNFELGRGSNSSDWRPQIVPSLKNVHVIQVAC 311

Query: 360 GGYHSLVLTDDGKVYTWXXXXXXXXXXXSVKNEKVPRVVESLADENVVYVACGSMCSSAV 539
           GGYHSL LTD+G+V +W           +++N +VP  +++L++E +VY+ACG   S+A+
Sbjct: 312 GGYHSLALTDEGEVLSWGHGGHGQLGHPTIQNHRVPLAIKALSEERIVYIACGGSTSAAI 371

Query: 540 TDSGKLYMWGKGRDTQLGVPGVLDIQAVPVLVDFLVD-NEELGPPHVNAVAAGASHAMCL 716
           ++ G LYMWG  RD QLGVP + ++Q +PV V+FL D +E+  PP V +VA GASHAMCL
Sbjct: 372 SEKGDLYMWGNARDCQLGVPDLPEVQPLPVKVNFLADGDEDPSPPRVISVAIGASHAMCL 431

Query: 717 LSR 725
           +SR
Sbjct: 432 VSR 434



 Score = 85.9 bits (211), Expect = 3e-14
 Identities = 63/187 (33%), Positives = 85/187 (45%), Gaps = 6/187 (3%)
 Frame = +3

Query: 180 VPVIASCCGGFFSLALTKDGQVWSWGGNENFELGRGTAKNDWRPRPIPALDGVNVIQISC 359
           V V  SC  G F  AL  DG  W WG  +   LG G   + + PR  P L G+ V+ +  
Sbjct: 94  VEVGISC--GLFHSALLVDGAAWVWGKGDGGRLGLGDEASAFVPRANPNLAGLRVLAL-- 149

Query: 360 GGYHSLVLTDDGKVYTWXXXXXXXXXXXSVKNEKVPRVVESLADENVVYVACGSMCSSAV 539
           GG HS  LT  G V+TW               E +PR V    +  +V++A     ++A+
Sbjct: 150 GGIHSAALTASGDVFTWGYGGFGALGHYVYHRELLPRKVNCPWEGKIVHIATSGAHTAAI 209

Query: 540 TDSGKLYMWGKGR-DTQLGV-----PGVLDIQAVPVLVDFLVDNEELGPPHVNAVAAGAS 701
           T+SG+LY WG+   D +LG+     PG     +VP  V  L       P  V AVA G  
Sbjct: 210 TESGELYTWGRDEGDGRLGLGSGGGPGEAGSLSVPSKVSAL-------PVPVAAVACGGF 262

Query: 702 HAMCLLS 722
             + L S
Sbjct: 263 FTLALTS 269


>ref|XP_002460662.1| hypothetical protein SORBIDRAFT_02g032760 [Sorghum bicolor]
           gi|241924039|gb|EER97183.1| hypothetical protein
           SORBIDRAFT_02g032760 [Sorghum bicolor]
          Length = 432

 Score =  273 bits (698), Expect = 1e-70
 Identities = 128/242 (52%), Positives = 171/242 (70%), Gaps = 2/242 (0%)
 Frame = +3

Query: 3   WNGKITYISTSGAHTAAVTESGELYTWXXXXXXXXXXXXXXXXPDE-GASGKPLKVRALS 179
           W GKIT+ISTSGAHTAA+T+SGELYTW                P E G+   P KV AL 
Sbjct: 185 WEGKITHISTSGAHTAAITDSGELYTWGRDEGDGRLGLGSGGGPGEAGSLSVPSKVNALP 244

Query: 180 VPVIASCCGGFFSLALTKDGQVWSWGGNENFELGRGTAKNDWRPRPIPALDGVNVIQISC 359
           VPV A  CGGFF++ALT DGQ+WSWG N NFELGRG+  +DWRP+ +P+L  + VIQ++C
Sbjct: 245 VPVAAVACGGFFTMALTSDGQLWSWGANSNFELGRGSNFSDWRPQLVPSLKSIRVIQVAC 304

Query: 360 GGYHSLVLTDDGKVYTWXXXXXXXXXXXSVKNEKVPRVVESLADENVVYVACGSMCSSAV 539
           GGYHSL LTD+G+V +W           +++N ++P  +++L+DE +V++ACG   S+A+
Sbjct: 305 GGYHSLALTDEGEVLSWGHGGHGQLGHPTLQNHRIPLAIKALSDERIVHIACGGSTSAAI 364

Query: 540 TDSGKLYMWGKGRDTQLGVPGVLDIQAVPVLVDFLVD-NEELGPPHVNAVAAGASHAMCL 716
           ++ G LYMWG  RD QLGVPG+ ++Q +PV V+FL D +E+LGP  V +VA GASHAMCL
Sbjct: 365 SEKGDLYMWGNARDCQLGVPGLPEVQPLPVKVNFLRDGDEDLGPSRVISVAIGASHAMCL 424

Query: 717 LS 722
           +S
Sbjct: 425 VS 426



 Score = 87.0 bits (214), Expect = 1e-14
 Identities = 62/187 (33%), Positives = 86/187 (45%), Gaps = 6/187 (3%)
 Frame = +3

Query: 180 VPVIASCCGGFFSLALTKDGQVWSWGGNENFELGRGTAKNDWRPRPIPALDGVNVIQISC 359
           V V  SC  G F  AL  +G VW WG  +   LG G   + + PRP P L  + ++ +  
Sbjct: 87  VEVGISC--GLFHSALLVEGSVWVWGKGDGGRLGLGDESSAFVPRPNPNLRDLRLLAL-- 142

Query: 360 GGYHSLVLTDDGKVYTWXXXXXXXXXXXSVKNEKVPRVVESLADENVVYVACGSMCSSAV 539
           GG HS  LT  G V+TW               E +PR V    +  + +++     ++A+
Sbjct: 143 GGIHSAALTTSGDVFTWGYGGFGALGHYVYHRELLPRQVNGPWEGKITHISTSGAHTAAI 202

Query: 540 TDSGKLYMWGKGR-DTQLGV-----PGVLDIQAVPVLVDFLVDNEELGPPHVNAVAAGAS 701
           TDSG+LY WG+   D +LG+     PG     +VP  V+ L       P  V AVA G  
Sbjct: 203 TDSGELYTWGRDEGDGRLGLGSGGGPGEAGSLSVPSKVNAL-------PVPVAAVACGGF 255

Query: 702 HAMCLLS 722
             M L S
Sbjct: 256 FTMALTS 262


>ref|XP_004146002.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
          Length = 463

 Score =  273 bits (697), Expect = 1e-70
 Identities = 130/245 (53%), Positives = 167/245 (68%), Gaps = 1/245 (0%)
 Frame = +3

Query: 3   WNGKITYISTSGAHTAAVTESGELYTWXXXXXXXXXXXXXXXXPDEGAS-GKPLKVRALS 179
           W G+I +I+TSGAHTAA+TESGE+YTW                P+EG     P +VRAL 
Sbjct: 218 WRGRIKHIATSGAHTAAITESGEVYTWGRDEGDGRLGLGPGRGPNEGGGLSIPCRVRALP 277

Query: 180 VPVIASCCGGFFSLALTKDGQVWSWGGNENFELGRGTAKNDWRPRPIPALDGVNVIQISC 359
            PV A  CGGFF++AL  DG++W+WG N NFELGRG     W P+P+P+L+   +IQI C
Sbjct: 278 APVAAVSCGGFFTMALGVDGKLWNWGANTNFELGRGNNIGGWEPKPVPSLEDTPIIQIVC 337

Query: 360 GGYHSLVLTDDGKVYTWXXXXXXXXXXXSVKNEKVPRVVESLADENVVYVACGSMCSSAV 539
           GGYHSLVLT DGKV +W           S++NEKVPRV+++LAD+ V+Y+AC    S+AV
Sbjct: 338 GGYHSLVLTGDGKVLSWGYGGHGQLGHSSIQNEKVPRVIDALADKRVIYIACCGSSSAAV 397

Query: 540 TDSGKLYMWGKGRDTQLGVPGVLDIQAVPVLVDFLVDNEELGPPHVNAVAAGASHAMCLL 719
           T  GKLYMWG  +D+QLGVPG+ ++Q  PV V FL +++ LGP HV +VA GASHAMCL+
Sbjct: 398 TAEGKLYMWGNAKDSQLGVPGLPEVQTSPVEVIFLTEDDGLGPYHVLSVAVGASHAMCLV 457

Query: 720 SRSPR 734
            R  R
Sbjct: 458 LRRGR 462



 Score = 68.9 bits (167), Expect = 4e-09
 Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 2/134 (1%)
 Frame = +3

Query: 207 GFFSLALTKDGQVWSWGGNENFELGRGTAKNDWRPRPIPALDGVNVIQISCGGYHSLVLT 386
           G F  +L  +G+VW WG  +   LG G     + P     L+ V  I +  GG HS+ L 
Sbjct: 127 GLFHSSLLVNGKVWIWGKGDGGRLGFGHENPVFVPTLNSRLESVRCIAL--GGLHSVALN 184

Query: 387 DDGKVYTWXXXXXXXXXXXSVKNEKVPRVVESLADENVVYVACGSMCSSAVTDSGKLYMW 566
             G+V+TW               E VPR+VE      + ++A     ++A+T+SG++Y W
Sbjct: 185 ALGQVFTWGYGGFGALGHSVYHRELVPRLVEGSWRGRIKHIATSGAHTAAITESGEVYTW 244

Query: 567 GKGR-DTQLGV-PG 602
           G+   D +LG+ PG
Sbjct: 245 GRDEGDGRLGLGPG 258


>ref|XP_002510629.1| guanine nucleotide exchange factor P532, putative [Ricinus
           communis] gi|223551330|gb|EEF52816.1| guanine nucleotide
           exchange factor P532, putative [Ricinus communis]
          Length = 450

 Score =  272 bits (695), Expect = 2e-70
 Identities = 127/242 (52%), Positives = 170/242 (70%), Gaps = 1/242 (0%)
 Frame = +3

Query: 6   NGKITYISTSGAHTAAVTESGELYTWXXXXXXXXXXXXXXXXPDEGAS-GKPLKVRALSV 182
           N KI +I+TSG HTAA+TE+GE+YTW                P+EG     P KV+AL+V
Sbjct: 207 NEKIRHIATSGTHTAAITETGEVYTWGRDEGDGRLGLGPGRGPNEGGGLSIPSKVKALTV 266

Query: 183 PVIASCCGGFFSLALTKDGQVWSWGGNENFELGRGTAKNDWRPRPIPALDGVNVIQISCG 362
           PV A  CGGFF+  LT++GQ+W+WG N N+ELGRG     W+P+PIP L+GV VIQI+ G
Sbjct: 267 PVAAVFCGGFFTAVLTEEGQIWNWGANSNYELGRGNKTGGWQPKPIPNLEGVRVIQIASG 326

Query: 363 GYHSLVLTDDGKVYTWXXXXXXXXXXXSVKNEKVPRVVESLADENVVYVACGSMCSSAVT 542
           GYHSL LTD+GKV +W           S++N+K+P V+++LAD+ VVY+ACG   S+A+T
Sbjct: 327 GYHSLALTDEGKVLSWGFGGHGQLGHPSIQNQKIPMVIDALADQRVVYIACGGSTSAAIT 386

Query: 543 DSGKLYMWGKGRDTQLGVPGVLDIQAVPVLVDFLVDNEELGPPHVNAVAAGASHAMCLLS 722
           D GKLYMWG  +D+QLGVPG+ ++Q  PV V FL++++ LGP  V +VA GASHAMCL+ 
Sbjct: 387 DEGKLYMWGNAKDSQLGVPGLPEVQPCPVEVVFLMEDDGLGPHKVLSVAVGASHAMCLVL 446

Query: 723 RS 728
           R+
Sbjct: 447 RT 448



 Score = 79.3 bits (194), Expect = 3e-12
 Identities = 46/144 (31%), Positives = 75/144 (52%), Gaps = 2/144 (1%)
 Frame = +3

Query: 177 SVPVIASCCGGFFSLALTKDGQVWSWGGNENFELGRGTAKNDWRPRPIPALDGVNVIQIS 356
           ++ V  SC  G F  AL  DG +W WG  +   LG G     + P   P LD    + + 
Sbjct: 107 AIEVGISC--GLFHSALLVDGNIWIWGKGDGGRLGFGHENPVFVPTLNPNLDPAKCVAL- 163

Query: 357 CGGYHSLVLTDDGKVYTWXXXXXXXXXXXSVKNEKVPRVVESLADENVVYVACGSMCSSA 536
            GG HS+ LT  G+V+TW               E +PR+V+ +++E + ++A     ++A
Sbjct: 164 -GGVHSVALTSLGQVFTWGYGGFGALGHCVYHRELLPRLVQGISNEKIRHIATSGTHTAA 222

Query: 537 VTDSGKLYMWGKGR-DTQLGV-PG 602
           +T++G++Y WG+   D +LG+ PG
Sbjct: 223 ITETGEVYTWGRDEGDGRLGLGPG 246


>gb|ACF84924.1| unknown [Zea mays] gi|414886543|tpg|DAA62557.1| TPA: putative
           regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 432

 Score =  272 bits (695), Expect = 2e-70
 Identities = 129/242 (53%), Positives = 169/242 (69%), Gaps = 2/242 (0%)
 Frame = +3

Query: 3   WNGKITYISTSGAHTAAVTESGELYTWXXXXXXXXXXXXXXXXPDE-GASGKPLKVRALS 179
           W GKIT+ISTSGAHTAA+T+SGELYTW                P E G+   P KV AL 
Sbjct: 185 WEGKITHISTSGAHTAAITDSGELYTWGRDEGDGRLGLGSGGGPGEAGSLSVPSKVNALP 244

Query: 180 VPVIASCCGGFFSLALTKDGQVWSWGGNENFELGRGTAKNDWRPRPIPALDGVNVIQISC 359
           VPV A  CGGFF++ALT DGQ+WSWG N NFELGRG+  +DWRP+ +P+L    VIQ++C
Sbjct: 245 VPVAAVACGGFFTMALTSDGQLWSWGANSNFELGRGSNFSDWRPQLVPSLKSTRVIQVAC 304

Query: 360 GGYHSLVLTDDGKVYTWXXXXXXXXXXXSVKNEKVPRVVESLADENVVYVACGSMCSSAV 539
           GGYHSL LTD+GKV +W           +++N +VP  +++L+DE +V++ACG   S+A+
Sbjct: 305 GGYHSLALTDEGKVLSWGHGGHGQLGHPTLQNHRVPLAIKALSDERIVHIACGGSTSAAI 364

Query: 540 TDSGKLYMWGKGRDTQLGVPGVLDIQAVPVLVDFLVDNEE-LGPPHVNAVAAGASHAMCL 716
           ++ G LYMWG  RD QLG+PG+ ++Q +PV V FL D++E LGP  V +VA GASHAMCL
Sbjct: 365 SEKGDLYMWGNARDCQLGIPGLPEVQPLPVKVIFLRDDDEGLGPSRVISVAIGASHAMCL 424

Query: 717 LS 722
           +S
Sbjct: 425 VS 426



 Score = 78.6 bits (192), Expect = 5e-12
 Identities = 58/187 (31%), Positives = 83/187 (44%), Gaps = 6/187 (3%)
 Frame = +3

Query: 180 VPVIASCCGGFFSLALTKDGQVWSWGGNENFELGRGTAKNDWRPRPIPALDGVNVIQISC 359
           V V  SC  G F  +L  +G  W WG  +   LG G   + + P   P L  + ++ +  
Sbjct: 87  VEVGISC--GLFHSSLLVEGGAWVWGKGDGGRLGLGDESSAFVPHSNPNLRDLRLLAL-- 142

Query: 360 GGYHSLVLTDDGKVYTWXXXXXXXXXXXSVKNEKVPRVVESLADENVVYVACGSMCSSAV 539
           GG HS  LT  G V+TW               E +PR V    +  + +++     ++A+
Sbjct: 143 GGIHSAALTTSGDVFTWGYGGFGALGHHVYHRELLPRQVNGPWEGKITHISTSGAHTAAI 202

Query: 540 TDSGKLYMWGKGR-DTQLGV-----PGVLDIQAVPVLVDFLVDNEELGPPHVNAVAAGAS 701
           TDSG+LY WG+   D +LG+     PG     +VP  V+ L       P  V AVA G  
Sbjct: 203 TDSGELYTWGRDEGDGRLGLGSGGGPGEAGSLSVPSKVNAL-------PVPVAAVACGGF 255

Query: 702 HAMCLLS 722
             M L S
Sbjct: 256 FTMALTS 262


>gb|EMS58189.1| hypothetical protein TRIUR3_10602 [Triticum urartu]
          Length = 324

 Score =  270 bits (691), Expect = 7e-70
 Identities = 127/243 (52%), Positives = 168/243 (69%), Gaps = 2/243 (0%)
 Frame = +3

Query: 3   WNGKITYISTSGAHTAAVTESGELYTWXXXXXXXXXXXXXXXXPDE-GASGKPLKVRALS 179
           W GKI +I+TSGAHTAA+TESGELYTW                P E G+   P KV  L 
Sbjct: 77  WEGKIVHIATSGAHTAAITESGELYTWGRDEGDGRLGLGSGGGPGEAGSLSVPSKVSVLP 136

Query: 180 VPVIASCCGGFFSLALTKDGQVWSWGGNENFELGRGTAKNDWRPRPIPALDGVNVIQISC 359
           VP  A  CGGFF+LALT DGQ+WSWG N NFELGRG+  +DWRP+ +P+L  V+VIQ++C
Sbjct: 137 VPAAAVACGGFFTLALTSDGQLWSWGANSNFELGRGSNSSDWRPQIVPSLKNVHVIQVAC 196

Query: 360 GGYHSLVLTDDGKVYTWXXXXXXXXXXXSVKNEKVPRVVESLADENVVYVACGSMCSSAV 539
           GGYHSL LTD+G+V +W           +++N +VP  +++L++E +VY+ACG   S+A+
Sbjct: 197 GGYHSLALTDEGEVLSWGHGGHGQLGHPTIQNHRVPLAIKALSEERIVYIACGGSTSAAI 256

Query: 540 TDSGKLYMWGKGRDTQLGVPGVLDIQAVPVLVDFLVD-NEELGPPHVNAVAAGASHAMCL 716
           ++ G LYMWG  RD QLGVP + ++Q +PV V+FL D +E+  PP V +VA GASHAMCL
Sbjct: 257 SEKGDLYMWGNARDCQLGVPDLPEVQPLPVKVNFLADGDEDPSPPRVISVAIGASHAMCL 316

Query: 717 LSR 725
           +SR
Sbjct: 317 VSR 319


>ref|XP_003530841.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like isoform
           X1 [Glycine max]
          Length = 444

 Score =  270 bits (691), Expect = 7e-70
 Identities = 125/242 (51%), Positives = 165/242 (68%), Gaps = 1/242 (0%)
 Frame = +3

Query: 3   WNGKITYISTSGAHTAAVTESGELYTWXXXXXXXXXXXXXXXXPDE-GASGKPLKVRALS 179
           W G I +I+TSG HTAA+TESGELY W                PD  G    P KV+ L 
Sbjct: 200 WEGTIKHIATSGTHTAAITESGELYIWGRDEGDGRLGLGPGRGPDHAGGLSIPSKVKELP 259

Query: 180 VPVIASCCGGFFSLALTKDGQVWSWGGNENFELGRGTAKNDWRPRPIPALDGVNVIQISC 359
            P+ A  CGGFF++ALT DGQ+W+WG N N+ELGRG     W+PRP+P+L+ V +IQ++ 
Sbjct: 260 YPIAAVSCGGFFTMALTVDGQLWNWGANSNYELGRGDKIGGWKPRPVPSLENVKIIQLAS 319

Query: 360 GGYHSLVLTDDGKVYTWXXXXXXXXXXXSVKNEKVPRVVESLADENVVYVACGSMCSSAV 539
           GGYHSL LTDDGKV +W           S++N+K+P VVE+LA EN++Y++CG   S+AV
Sbjct: 320 GGYHSLALTDDGKVLSWGHGGQGQLGHGSIQNQKIPAVVEALAHENIIYISCGGSSSAAV 379

Query: 540 TDSGKLYMWGKGRDTQLGVPGVLDIQAVPVLVDFLVDNEELGPPHVNAVAAGASHAMCLL 719
           TD+GKLYMWG   D+QLG+PG+  +Q+ PV V+FL++++ LGP  V +VA GASHAMCL 
Sbjct: 380 TDNGKLYMWGNANDSQLGIPGLPPVQSCPVEVNFLMEDDGLGPHKVLSVAIGASHAMCLA 439

Query: 720 SR 725
            R
Sbjct: 440 LR 441



 Score = 82.0 bits (201), Expect = 4e-13
 Identities = 51/147 (34%), Positives = 78/147 (53%), Gaps = 2/147 (1%)
 Frame = +3

Query: 168 RALSVPVIASCCGGFFSLALTKDGQVWSWGGNENFELGRGTAKNDWRPRPIPALDGVNVI 347
           RAL V +  SC  G F  +L  DG +W WG  +   LG G     + P   P LD  N++
Sbjct: 100 RALEVGL--SC--GLFHSSLIVDGALWIWGKGDGGRLGFGHENPLFVPTLNPHLD--NLL 153

Query: 348 QISCGGYHSLVLTDDGKVYTWXXXXXXXXXXXSVKNEKVPRVVESLADENVVYVACGSMC 527
            ++ GG HS+ LT DG+V+TW               E  PR+V+   +  + ++A     
Sbjct: 154 SVALGGLHSVALTSDGEVFTWGYGGFGALGHSVYHRELFPRLVKGSWEGTIKHIATSGTH 213

Query: 528 SSAVTDSGKLYMWGKGR-DTQLGV-PG 602
           ++A+T+SG+LY+WG+   D +LG+ PG
Sbjct: 214 TAAITESGELYIWGRDEGDGRLGLGPG 240


>ref|NP_001144762.1| uncharacterized protein LOC100277821 [Zea mays]
           gi|195646694|gb|ACG42815.1| hypothetical protein [Zea
           mays]
          Length = 432

 Score =  270 bits (691), Expect = 7e-70
 Identities = 128/242 (52%), Positives = 169/242 (69%), Gaps = 2/242 (0%)
 Frame = +3

Query: 3   WNGKITYISTSGAHTAAVTESGELYTWXXXXXXXXXXXXXXXXPDE-GASGKPLKVRALS 179
           W GKIT+ISTSGAHTAA+T+SGELYTW                P E G+   P KV AL 
Sbjct: 185 WEGKITHISTSGAHTAAITDSGELYTWGRDEGDGRLGLGSGGGPGEAGSLSVPSKVNALP 244

Query: 180 VPVIASCCGGFFSLALTKDGQVWSWGGNENFELGRGTAKNDWRPRPIPALDGVNVIQISC 359
           VPV A  CGGFF++ALT DGQ+WSWG N NFELGRG+  +DWRP+ +P+L    VIQ++C
Sbjct: 245 VPVAAVACGGFFTMALTSDGQLWSWGANSNFELGRGSNFSDWRPQLVPSLKSTRVIQVAC 304

Query: 360 GGYHSLVLTDDGKVYTWXXXXXXXXXXXSVKNEKVPRVVESLADENVVYVACGSMCSSAV 539
           GGYHSL LTD+G+V +W           +++N +VP  +++L+DE +V++ACG   S+A+
Sbjct: 305 GGYHSLALTDEGEVLSWGHGGHGQLGHPTLQNHRVPLAIKALSDERIVHIACGGSTSAAI 364

Query: 540 TDSGKLYMWGKGRDTQLGVPGVLDIQAVPVLVDFLVDNEE-LGPPHVNAVAAGASHAMCL 716
           ++ G LYMWG  RD QLG+PG+ ++Q +PV V FL D++E LGP  V +VA GASHAMCL
Sbjct: 365 SEKGDLYMWGNARDCQLGIPGLPEVQPLPVKVIFLRDDDEGLGPSRVISVAIGASHAMCL 424

Query: 717 LS 722
           +S
Sbjct: 425 VS 426



 Score = 80.5 bits (197), Expect = 1e-12
 Identities = 59/187 (31%), Positives = 84/187 (44%), Gaps = 6/187 (3%)
 Frame = +3

Query: 180 VPVIASCCGGFFSLALTKDGQVWSWGGNENFELGRGTAKNDWRPRPIPALDGVNVIQISC 359
           V V  SC  G F  +L  +G  W WG  +   LG G   + + PR  P L  + ++ +  
Sbjct: 87  VEVGISC--GLFHSSLLVEGGAWVWGKGDGGRLGLGDESSAFVPRSNPNLRDLRLLAL-- 142

Query: 360 GGYHSLVLTDDGKVYTWXXXXXXXXXXXSVKNEKVPRVVESLADENVVYVACGSMCSSAV 539
           GG HS  LT  G V+TW               E +PR V    +  + +++     ++A+
Sbjct: 143 GGIHSAALTTSGDVFTWGYGGFGALGHHVYHRELLPRQVNGPWEGKITHISTSGAHTAAI 202

Query: 540 TDSGKLYMWGKGR-DTQLGV-----PGVLDIQAVPVLVDFLVDNEELGPPHVNAVAAGAS 701
           TDSG+LY WG+   D +LG+     PG     +VP  V+ L       P  V AVA G  
Sbjct: 203 TDSGELYTWGRDEGDGRLGLGSGGGPGEAGSLSVPSKVNAL-------PVPVAAVACGGF 255

Query: 702 HAMCLLS 722
             M L S
Sbjct: 256 FTMALTS 262


>gb|ESW12739.1| hypothetical protein PHAVU_008G138200g [Phaseolus vulgaris]
          Length = 442

 Score =  269 bits (688), Expect = 1e-69
 Identities = 126/242 (52%), Positives = 163/242 (67%), Gaps = 1/242 (0%)
 Frame = +3

Query: 3   WNGKITYISTSGAHTAAVTESGELYTWXXXXXXXXXXXXXXXXPDE-GASGKPLKVRALS 179
           W G I +I+TSG HTAA+TESGELY W                PD  G    P +V+ L 
Sbjct: 198 WEGTIKHIATSGTHTAAITESGELYIWGRDEGDGRLGLGPGRGPDHAGGLSIPCRVKELP 257

Query: 180 VPVIASCCGGFFSLALTKDGQVWSWGGNENFELGRGTAKNDWRPRPIPALDGVNVIQISC 359
            PV A+ CGGFF++ALT+DGQ+W+WG N N+ELGRG     W+PRP+P+L+ V +IQI+ 
Sbjct: 258 YPVAAASCGGFFTMALTEDGQLWNWGANSNYELGRGDKTGGWKPRPVPSLENVEIIQIAS 317

Query: 360 GGYHSLVLTDDGKVYTWXXXXXXXXXXXSVKNEKVPRVVESLADENVVYVACGSMCSSAV 539
           GGYHSL LT DGKV +W           SV+N+K+P VVE+L+ E+++Y+ CG   S+AV
Sbjct: 318 GGYHSLALTGDGKVLSWGHGGQGQLGHGSVQNQKIPEVVEALSQEHIIYITCGGSSSAAV 377

Query: 540 TDSGKLYMWGKGRDTQLGVPGVLDIQAVPVLVDFLVDNEELGPPHVNAVAAGASHAMCLL 719
           TD+GKLYMWG   D+QLGVPG+  +Q  PV V FL+D++ LGP  V +VA GASHAMCL 
Sbjct: 378 TDNGKLYMWGNANDSQLGVPGLPPVQPYPVEVKFLMDDDGLGPHKVLSVAIGASHAMCLA 437

Query: 720 SR 725
            R
Sbjct: 438 LR 439



 Score = 78.2 bits (191), Expect = 6e-12
 Identities = 47/142 (33%), Positives = 74/142 (52%), Gaps = 2/142 (1%)
 Frame = +3

Query: 183 PVIASCCGGFFSLALTKDGQVWSWGGNENFELGRGTAKNDWRPRPIPALDGVNVIQISCG 362
           P +   CG F S +L  DG +W WG  +   LG G   + + P   P LD  N+  ++ G
Sbjct: 100 PDVGLSCGLFHS-SLVADGALWIWGKGDGGRLGFGHENSLFVPTLNPHLD--NLRTLALG 156

Query: 363 GYHSLVLTDDGKVYTWXXXXXXXXXXXSVKNEKVPRVVESLADENVVYVACGSMCSSAVT 542
           G HS+ LT  G+V+TW               E  PR+V+   +  + ++A     ++A+T
Sbjct: 157 GLHSVALTSAGEVFTWGYGGFGALGHSVYHRELFPRLVKGSWEGTIKHIATSGTHTAAIT 216

Query: 543 DSGKLYMWGKGR-DTQLGV-PG 602
           +SG+LY+WG+   D +LG+ PG
Sbjct: 217 ESGELYIWGRDEGDGRLGLGPG 238


>ref|XP_004306294.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
           [Fragaria vesca subsp. vesca]
          Length = 444

 Score =  269 bits (688), Expect = 1e-69
 Identities = 123/242 (50%), Positives = 171/242 (70%), Gaps = 1/242 (0%)
 Frame = +3

Query: 3   WNGKITYISTSGAHTAAVTESGELYTWXXXXXXXXXXXXXXXXPDEGAS-GKPLKVRALS 179
           W+G+I ++STSG HTAA+TESGELYTW                P+EG     P KV+AL 
Sbjct: 198 WSGRIQHVSTSGTHTAAITESGELYTWGRDEGDGRLGLGPNRGPNEGGGLSIPSKVKALP 257

Query: 180 VPVIASCCGGFFSLALTKDGQVWSWGGNENFELGRGTAKNDWRPRPIPALDGVNVIQISC 359
           +PV A  CGGFF++ LT++G++W+WG N NFELGRG     W+P+ +P+L GV +IQ++ 
Sbjct: 258 MPVAAVSCGGFFTMVLTENGELWNWGANSNFELGRGDRVGGWQPKAVPSLVGVRIIQVAS 317

Query: 360 GGYHSLVLTDDGKVYTWXXXXXXXXXXXSVKNEKVPRVVESLADENVVYVACGSMCSSAV 539
           GGYHS+ LTD+GKV +W           SV+N+K P  V++L DE V+Y+ACG   S+A+
Sbjct: 318 GGYHSIALTDEGKVLSWGHGGHGQLGNSSVQNQKTPTTVKALTDERVIYIACGGSSSAAI 377

Query: 540 TDSGKLYMWGKGRDTQLGVPGVLDIQAVPVLVDFLVDNEELGPPHVNAVAAGASHAMCLL 719
           TD+GKLYMWG  +D+QLGVPG+ +IQ+ PV V FL++++ LGP +V ++A GASHA+CL+
Sbjct: 378 TDTGKLYMWGYTKDSQLGVPGLPEIQSSPVEVKFLMEDDGLGPHNVLSIAVGASHAVCLV 437

Query: 720 SR 725
           SR
Sbjct: 438 SR 439



 Score = 79.0 bits (193), Expect = 4e-12
 Identities = 45/131 (34%), Positives = 66/131 (50%), Gaps = 1/131 (0%)
 Frame = +3

Query: 207 GFFSLALTKDGQVWSWGGNENFELGRGTAKNDWRPRPIPALDGVNVIQISCGGYHSLVLT 386
           G F  +L  DG+VW WG  +   LG G   + + P   P LD +  +  S GG HS+ LT
Sbjct: 107 GLFHSSLLVDGKVWIWGKGDGGRLGFGHENSAFLPTLNPYLDSIRCV--SLGGLHSVSLT 164

Query: 387 DDGKVYTWXXXXXXXXXXXSVKNEKVPRVVESLADENVVYVACGSMCSSAVTDSGKLYMW 566
             G+VYTW               E  PR+VE      + +V+     ++A+T+SG+LY W
Sbjct: 165 TLGEVYTWGYGGFGALGHSVYTRELFPRLVEGSWSGRIQHVSTSGTHTAAITESGELYTW 224

Query: 567 GKGR-DTQLGV 596
           G+   D +LG+
Sbjct: 225 GRDEGDGRLGL 235



 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 48/181 (26%), Positives = 79/181 (43%), Gaps = 10/181 (5%)
 Frame = +3

Query: 204 GGFFSLALTKDGQVWSWGGNENFELGRGTAKNDWRPRPIPALDGVNVIQISCGGYHSLVL 383
           GG  S++LT  G+V++WG      LG      +  PR +       +  +S  G H+  +
Sbjct: 156 GGLHSVSLTTLGEVYTWGYGGFGALGHSVYTRELFPRLVEGSWSGRIQHVSTSGTHTAAI 215

Query: 384 TDDGKVYTWXXXXXXXXXXXSVK---NE----KVPRVVESLADENVVYVACGSMCSSAVT 542
           T+ G++YTW                 NE     +P  V++L    V  V+CG   +  +T
Sbjct: 216 TESGELYTWGRDEGDGRLGLGPNRGPNEGGGLSIPSKVKAL-PMPVAAVSCGGFFTMVLT 274

Query: 543 DSGKLYMWGKGRDTQLG---VPGVLDIQAVPVLVDFLVDNEELGPPHVNAVAAGASHAMC 713
           ++G+L+ WG   + +LG     G    +AVP LV             +  VA+G  H++ 
Sbjct: 275 ENGELWNWGANSNFELGRGDRVGGWQPKAVPSLVGV----------RIIQVASGGYHSIA 324

Query: 714 L 716
           L
Sbjct: 325 L 325


>ref|XP_004166250.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
          Length = 463

 Score =  269 bits (688), Expect = 1e-69
 Identities = 129/245 (52%), Positives = 165/245 (67%), Gaps = 1/245 (0%)
 Frame = +3

Query: 3   WNGKITYISTSGAHTAAVTESGELYTWXXXXXXXXXXXXXXXXPDEGAS-GKPLKVRALS 179
           W G+I +I+TSGAHTAA+TESGE+YTW                P+EG     P +VRAL 
Sbjct: 218 WRGRIKHIATSGAHTAAITESGEVYTWGRDEGDGRLGLGPGRGPNEGGGLSIPCRVRALP 277

Query: 180 VPVIASCCGGFFSLALTKDGQVWSWGGNENFELGRGTAKNDWRPRPIPALDGVNVIQISC 359
            PV A  CGGFF++AL  DG++W+WG N NFELGRG     W P+P+P+L+   +IQI C
Sbjct: 278 APVAAVSCGGFFTMALGVDGKLWNWGANTNFELGRGNNIGGWEPKPVPSLEDTPIIQIVC 337

Query: 360 GGYHSLVLTDDGKVYTWXXXXXXXXXXXSVKNEKVPRVVESLADENVVYVACGSMCSSAV 539
           GGYHSL LT DGKV +W           S++NEKVPRV+++LAD+ V Y+AC    S+AV
Sbjct: 338 GGYHSLALTGDGKVLSWGYGGHGQLGHSSIQNEKVPRVIDALADKRVSYIACCGSSSAAV 397

Query: 540 TDSGKLYMWGKGRDTQLGVPGVLDIQAVPVLVDFLVDNEELGPPHVNAVAAGASHAMCLL 719
           T  GKLYMWG  +D+QLGVPG+ ++Q  PV V FL +++ LGP HV +VA GASHAMCL+
Sbjct: 398 TAEGKLYMWGNAKDSQLGVPGLPEVQTSPVEVIFLTEDDGLGPYHVLSVAVGASHAMCLV 457

Query: 720 SRSPR 734
            R  R
Sbjct: 458 LRRGR 462



 Score = 68.9 bits (167), Expect = 4e-09
 Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 2/134 (1%)
 Frame = +3

Query: 207 GFFSLALTKDGQVWSWGGNENFELGRGTAKNDWRPRPIPALDGVNVIQISCGGYHSLVLT 386
           G F  +L  +G+VW WG  +   LG G     + P     L+ V  I +  GG HS+ L 
Sbjct: 127 GLFHSSLLVNGKVWIWGKGDGGRLGFGHENPVFVPTLNSRLESVRCIAL--GGLHSVALN 184

Query: 387 DDGKVYTWXXXXXXXXXXXSVKNEKVPRVVESLADENVVYVACGSMCSSAVTDSGKLYMW 566
             G+V+TW               E VPR+VE      + ++A     ++A+T+SG++Y W
Sbjct: 185 ALGQVFTWGYGGFGALGHSVYHRELVPRLVEGSWRGRIKHIATSGAHTAAITESGEVYTW 244

Query: 567 GKGR-DTQLGV-PG 602
           G+   D +LG+ PG
Sbjct: 245 GRDEGDGRLGLGPG 258


>ref|XP_006660975.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like, partial
           [Oryza brachyantha]
          Length = 424

 Score =  268 bits (684), Expect = 4e-69
 Identities = 127/243 (52%), Positives = 168/243 (69%), Gaps = 2/243 (0%)
 Frame = +3

Query: 3   WNGKITYISTSGAHTAAVTESGELYTWXXXXXXXXXXXXXXXXPDE-GASGKPLKVRALS 179
           W GKI++I+T GAHTAA+T+SGELYTW                P E G+   P KV  L 
Sbjct: 177 WGGKISHIATGGAHTAAITDSGELYTWGRDEGDGRLGLGSGGGPGEAGSLSVPSKVNVLP 236

Query: 180 VPVIASCCGGFFSLALTKDGQVWSWGGNENFELGRGTAKNDWRPRPIPALDGVNVIQISC 359
           VPV A  CGGFF++ALT DGQ+WSWG N NFELGRG+  +DWRP+ +P+L   NVIQ++C
Sbjct: 237 VPVAAVACGGFFTMALTSDGQLWSWGANSNFELGRGSNSSDWRPQLVPSLKNSNVIQVAC 296

Query: 360 GGYHSLVLTDDGKVYTWXXXXXXXXXXXSVKNEKVPRVVESLADENVVYVACGSMCSSAV 539
           GGYHSL LTD+G V +W           +++N +VP  +++L++E +VY+A G   S+A+
Sbjct: 297 GGYHSLALTDEGVVLSWGHGGHGQLGHPTLQNHRVPLAIKALSEERIVYIASGGSTSAAI 356

Query: 540 TDSGKLYMWGKGRDTQLGVPGVLDIQAVPVLVDFLVD-NEELGPPHVNAVAAGASHAMCL 716
           ++ G LYMWG  RD QLGVPG+ +IQ +PV V+FL D +E+LGP  V +VA GASHAMCL
Sbjct: 357 SEKGDLYMWGNARDCQLGVPGLPEIQPLPVKVNFLTDGDEDLGPHRVISVAIGASHAMCL 416

Query: 717 LSR 725
           +SR
Sbjct: 417 VSR 419



 Score = 85.9 bits (211), Expect = 3e-14
 Identities = 64/195 (32%), Positives = 87/195 (44%), Gaps = 6/195 (3%)
 Frame = +3

Query: 156 PLKVRALSVPVIASCCGGFFSLALTKDGQVWSWGGNENFELGRGTAKNDWRPRPIPALDG 335
           P    A  V V  SC  G F  A+  DG  W WG  +   LG G   + + PR  P L  
Sbjct: 71  PKAATAGGVEVGISC--GLFHSAVIVDGGAWVWGKGDGGRLGLGDESSTFVPRHNPNLSE 128

Query: 336 VNVIQISCGGYHSLVLTDDGKVYTWXXXXXXXXXXXSVKNEKVPRVVESLADENVVYVAC 515
           + V+ +  GG HS  LT  G+V+TW               E +P+ V       + ++A 
Sbjct: 129 LRVLAL--GGIHSAALTASGEVFTWGYGGFGALGHYVYHRELLPKQVNGPWGGKISHIAT 186

Query: 516 GSMCSSAVTDSGKLYMWGKGR-DTQLGV-----PGVLDIQAVPVLVDFLVDNEELGPPHV 677
           G   ++A+TDSG+LY WG+   D +LG+     PG     +VP  V+ L       P  V
Sbjct: 187 GGAHTAAITDSGELYTWGRDEGDGRLGLGSGGGPGEAGSLSVPSKVNVL-------PVPV 239

Query: 678 NAVAAGASHAMCLLS 722
            AVA G    M L S
Sbjct: 240 AAVACGGFFTMALTS 254


>ref|XP_006383819.1| hypothetical protein POPTR_0004s00240g [Populus trichocarpa]
           gi|550339964|gb|ERP61616.1| hypothetical protein
           POPTR_0004s00240g [Populus trichocarpa]
          Length = 447

 Score =  267 bits (682), Expect = 7e-69
 Identities = 122/243 (50%), Positives = 168/243 (69%), Gaps = 1/243 (0%)
 Frame = +3

Query: 3   WNGKITYISTSGAHTAAVTESGELYTWXXXXXXXXXXXXXXXXPDEGAS-GKPLKVRALS 179
           W+GKI  ISTSG HTAAVTESGE+YTW                P+EG     P KV+ L 
Sbjct: 204 WDGKIRCISTSGTHTAAVTESGEVYTWGREEGDGRLGLGPGRGPNEGGGLSIPCKVKTLP 263

Query: 180 VPVIASCCGGFFSLALTKDGQVWSWGGNENFELGRGTAKNDWRPRPIPALDGVNVIQISC 359
           VPV    CGGFF++ LT++GQ+W+WG N N+ELGRG     WRP+PIP+L+   +IQI+ 
Sbjct: 264 VPVATVYCGGFFTMVLTEEGQIWNWGANSNYELGRGDKVGGWRPKPIPSLEDARIIQIAG 323

Query: 360 GGYHSLVLTDDGKVYTWXXXXXXXXXXXSVKNEKVPRVVESLADENVVYVACGSMCSSAV 539
           GGYH L LTD+GKV +W           S++++K+P V+++LAD++V+Y+ACG   S+A+
Sbjct: 324 GGYHCLALTDEGKVLSWGFGGHGQLGHSSIQSQKIPAVIDALADQHVIYIACGGSSSAAI 383

Query: 540 TDSGKLYMWGKGRDTQLGVPGVLDIQAVPVLVDFLVDNEELGPPHVNAVAAGASHAMCLL 719
           TD GKLYMWG  +D+QLG+PG+ ++Q+ PV V FL++++ LG   V +V+ GASHAMCL+
Sbjct: 384 TDKGKLYMWGNAKDSQLGIPGLPEVQSCPVEVKFLMEDDGLGQHSVLSVSVGASHAMCLV 443

Query: 720 SRS 728
            RS
Sbjct: 444 LRS 446



 Score = 72.8 bits (177), Expect = 3e-10
 Identities = 44/134 (32%), Positives = 63/134 (47%), Gaps = 2/134 (1%)
 Frame = +3

Query: 207 GFFSLALTKDGQVWSWGGNENFELGRGTAKNDWRPRPIPALDGVNVIQISCGGYHSLVLT 386
           G F  A+  DG  W WG  +   LG G     + P   P LD V    I+ GG HS  +T
Sbjct: 113 GLFHSAILADGHFWMWGKGDGGRLGFGHENPAFLPTLNPFLDSVR--SIALGGVHSAAIT 170

Query: 387 DDGKVYTWXXXXXXXXXXXSVKNEKVPRVVESLADENVVYVACGSMCSSAVTDSGKLYMW 566
             G ++TW               E  PR+VE   D  +  ++     ++AVT+SG++Y W
Sbjct: 171 SLGHIFTWGYGGFGALGHSVYHRELFPRLVEGSWDGKIRCISTSGTHTAAVTESGEVYTW 230

Query: 567 GKGR-DTQLGV-PG 602
           G+   D +LG+ PG
Sbjct: 231 GREEGDGRLGLGPG 244


>ref|XP_002331537.1| predicted protein [Populus trichocarpa]
          Length = 320

 Score =  267 bits (682), Expect = 7e-69
 Identities = 122/243 (50%), Positives = 168/243 (69%), Gaps = 1/243 (0%)
 Frame = +3

Query: 3   WNGKITYISTSGAHTAAVTESGELYTWXXXXXXXXXXXXXXXXPDEGAS-GKPLKVRALS 179
           W+GKI  ISTSG HTAAVTESGE+YTW                P+EG     P KV+ L 
Sbjct: 78  WDGKIRCISTSGTHTAAVTESGEVYTWGREEGDGRLGLGPGRGPNEGGGLSIPCKVKTLP 137

Query: 180 VPVIASCCGGFFSLALTKDGQVWSWGGNENFELGRGTAKNDWRPRPIPALDGVNVIQISC 359
           VPV    CGGFF++ LT++GQ+W+WG N N+ELGRG     WRP+PIP+L+   +IQI+ 
Sbjct: 138 VPVATVYCGGFFTMVLTEEGQIWNWGANSNYELGRGDKVGGWRPKPIPSLEDARIIQIAG 197

Query: 360 GGYHSLVLTDDGKVYTWXXXXXXXXXXXSVKNEKVPRVVESLADENVVYVACGSMCSSAV 539
           GGYH L LTD+GKV +W           S++++K+P V+++LAD++V+Y+ACG   S+A+
Sbjct: 198 GGYHCLALTDEGKVLSWGFGGHGQLGHSSIQSQKIPAVIDALADQHVIYIACGGSSSAAI 257

Query: 540 TDSGKLYMWGKGRDTQLGVPGVLDIQAVPVLVDFLVDNEELGPPHVNAVAAGASHAMCLL 719
           TD GKLYMWG  +D+QLG+PG+ ++Q+ PV V FL++++ LG   V +V+ GASHAMCL+
Sbjct: 258 TDKGKLYMWGNAKDSQLGIPGLPEVQSCPVEVKFLMEDDGLGQHSVLSVSVGASHAMCLV 317

Query: 720 SRS 728
            RS
Sbjct: 318 LRS 320



 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
 Frame = +3

Query: 252 WGGNENFELGRGTAKNDWRPRPIPALDGVNVIQISCGGYHSLVLTDDGKVYTWXXXXXXX 431
           WG  +   LG G     + P   P LD V    I+ GG HS  +T  G ++TW       
Sbjct: 2   WGKGDGGRLGFGHENPAFLPTLNPFLDSVR--SIALGGVHSAAITSLGHIFTWGYGGFGA 59

Query: 432 XXXXSVKNEKVPRVVESLADENVVYVACGSMCSSAVTDSGKLYMWGKGR-DTQLGV-PG 602
                   E  PR+VE   D  +  ++     ++AVT+SG++Y WG+   D +LG+ PG
Sbjct: 60  LGHSVYHRELFPRLVEGSWDGKIRCISTSGTHTAAVTESGEVYTWGREEGDGRLGLGPG 118