BLASTX nr result
ID: Ephedra28_contig00020900
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00020900
(647 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002533814.1| RING-H2 finger protein ATL1M, putative [Rici... 88 2e-15
gb|ABR17073.1| unknown [Picea sitchensis] 86 7e-15
ref|XP_004296864.1| PREDICTED: RING-H2 finger protein ATL2-like ... 86 1e-14
dbj|BAK03766.1| predicted protein [Hordeum vulgare subsp. vulgare] 84 3e-14
gb|ACN40904.1| unknown [Picea sitchensis] 84 3e-14
gb|AFK35896.1| unknown [Lotus japonicus] 84 4e-14
emb|CBI17870.3| unnamed protein product [Vitis vinifera] 84 4e-14
ref|XP_002267344.1| PREDICTED: RING-H2 finger protein ATL43-like... 84 4e-14
ref|NP_001066681.1| Os12g0432600 [Oryza sativa Japonica Group] g... 84 5e-14
gb|ABK26617.1| unknown [Picea sitchensis] 84 5e-14
gb|AFW70296.1| putative RING zinc finger domain superfamily prot... 83 6e-14
ref|XP_006494326.1| PREDICTED: E3 ubiquitin-protein ligase ATL42... 83 8e-14
ref|XP_006451246.1| hypothetical protein CICLE_v10010254mg [Citr... 83 8e-14
ref|XP_002315508.2| hypothetical protein POPTR_0010s01400g [Popu... 82 1e-13
ref|XP_006298704.1| hypothetical protein CARUB_v10014799mg [Caps... 82 1e-13
ref|XP_006357148.1| PREDICTED: RING-H2 finger protein ATL3-like ... 82 1e-13
ref|XP_002304259.2| hypothetical protein POPTR_0003s07090g [Popu... 82 1e-13
ref|XP_006298197.1| hypothetical protein CARUB_v10014245mg [Caps... 82 1e-13
ref|XP_006474307.1| PREDICTED: RING-H2 finger protein ATL43-like... 82 2e-13
ref|XP_006453207.1| hypothetical protein CICLE_v10010271mg, part... 82 2e-13
>ref|XP_002533814.1| RING-H2 finger protein ATL1M, putative [Ricinus communis]
gi|223526251|gb|EEF28567.1| RING-H2 finger protein
ATL1M, putative [Ricinus communis]
Length = 281
Score = 88.2 bits (217), Expect = 2e-15
Identities = 48/124 (38%), Positives = 64/124 (51%), Gaps = 21/124 (16%)
Frame = -1
Query: 326 VLLMGLAIVVALSL---WYFWN------------------HLPSSTKRVRGLSHSDLKGL 210
+L M + V+ L L W++W P+ RGL S L+ L
Sbjct: 23 ILFMVVVFVLLLHLYAKWFWWRIEEPTSPPHSRRNRRRFVFTPAQDPVRRGLDMSVLRSL 82
Query: 209 STMVFQSHKDEEDPEECAVCLGSFSPGDMCRLMPLCSHYFHVSCADQWLRRHSTCPLCRC 30
++FQS +D +D ECAVCL + G+ RL+P C+H FHV C D W + HSTCPLCR
Sbjct: 83 PVVIFQS-EDFKDGLECAVCLSEIAQGEKARLLPKCNHGFHVDCIDMWFQSHSTCPLCRN 141
Query: 29 SVVP 18
SV P
Sbjct: 142 SVAP 145
>gb|ABR17073.1| unknown [Picea sitchensis]
Length = 187
Score = 86.3 bits (212), Expect = 7e-15
Identities = 52/130 (40%), Positives = 68/130 (52%), Gaps = 19/130 (14%)
Frame = -1
Query: 359 MAAQISQFLSWVLLMGLAIVVALSLWYFWNHLPSSTKRVR--------------GLSHSD 222
+AA +S L L + ++V LW W + R R GLS +D
Sbjct: 7 LAAMMSLLL---LCAAIGVMVLAYLWLVWYVSLHQSLRQRPLEDNGNGKPPKQQGLSEAD 63
Query: 221 LKGLSTMVFQSHKDEEDPE-----ECAVCLGSFSPGDMCRLMPLCSHYFHVSCADQWLRR 57
L+ L T+ + K+EE E ECAVCL +F GD CR++P+CSH FHV CAD WL +
Sbjct: 64 LQRLPTI--ECCKEEEGDERTGNAECAVCLEAFQSGDRCRVIPVCSHAFHVQCADAWLSK 121
Query: 56 HSTCPLCRCS 27
S CPLCR S
Sbjct: 122 RSVCPLCRRS 131
>ref|XP_004296864.1| PREDICTED: RING-H2 finger protein ATL2-like [Fragaria vesca subsp.
vesca]
Length = 288
Score = 85.5 bits (210), Expect = 1e-14
Identities = 37/75 (49%), Positives = 43/75 (57%)
Frame = -1
Query: 242 RGLSHSDLKGLSTMVFQSHKDEEDPEECAVCLGSFSPGDMCRLMPLCSHYFHVSCADQWL 63
RGL S LK L V+ S E ECAVCL F + R++P C H FH+ C D W
Sbjct: 92 RGLDESVLKSLPVFVYDSKTHPEAVLECAVCLSEFEENETGRVLPKCKHSFHIECIDMWF 151
Query: 62 RRHSTCPLCRCSVVP 18
HSTCPLCRC+V P
Sbjct: 152 HSHSTCPLCRCAVEP 166
>dbj|BAK03766.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 404
Score = 84.3 bits (207), Expect = 3e-14
Identities = 38/82 (46%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Frame = -1
Query: 254 TKRVRGLSHSDLKGLSTMVF---QSHKDEEDPEECAVCLGSFSPGDMCRLMPLCSHYFHV 84
++R+RGL + L+ L TM + ++HK + ECAVCL F D RL+P CSH FH
Sbjct: 105 SRRMRGLDPAALEALPTMAYADVKAHKVGKGELECAVCLSEFDDDDTLRLLPKCSHAFHA 164
Query: 83 SCADQWLRRHSTCPLCRCSVVP 18
C D WL H TCP+CR ++VP
Sbjct: 165 DCIDAWLASHVTCPVCRANLVP 186
>gb|ACN40904.1| unknown [Picea sitchensis]
Length = 218
Score = 84.3 bits (207), Expect = 3e-14
Identities = 46/117 (39%), Positives = 61/117 (52%), Gaps = 17/117 (14%)
Frame = -1
Query: 326 VLLMGLAIVVALSLWYFW----NHLP--------SSTKRVRGLSHSDLKGLSTMVFQSHK 183
+L G+ + VA+ LW W N+ P + +GLS +DL+ L T+ Q +
Sbjct: 48 LLCAGMGMGVAVYLWLVWYVSLNNRPRQRASEDNGKPHKHQGLSEADLQRLPTIECQEEE 107
Query: 182 DEEDP-----EECAVCLGSFSPGDMCRLMPLCSHYFHVSCADQWLRRHSTCPLCRCS 27
ECAVCL F GD CR++P CSH FHV CAD WL + S CP+CR S
Sbjct: 108 SHAGDGGGGDAECAVCLEVFQSGDRCRVIPACSHAFHVHCADAWLSKRSVCPICRRS 164
>gb|AFK35896.1| unknown [Lotus japonicus]
Length = 286
Score = 84.0 bits (206), Expect = 4e-14
Identities = 42/80 (52%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Frame = -1
Query: 260 SSTKRVR-GLSHSDLKGLSTMVFQSHKDEEDPEECAVCLGSFSPGDMCRLMPLCSHYFHV 84
S +R R GL S L+ L +VFQS +D +D ECAVCL G+ RL+P C+H FHV
Sbjct: 66 SEPRRPRTGLDPSVLRSLPVVVFQS-QDFKDGLECAVCLSELDEGEKARLLPKCNHGFHV 124
Query: 83 SCADQWLRRHSTCPLCRCSV 24
C D W + HSTCPLCR SV
Sbjct: 125 DCIDMWFQSHSTCPLCRTSV 144
>emb|CBI17870.3| unnamed protein product [Vitis vinifera]
Length = 457
Score = 84.0 bits (206), Expect = 4e-14
Identities = 37/83 (44%), Positives = 50/83 (60%)
Frame = -1
Query: 266 LPSSTKRVRGLSHSDLKGLSTMVFQSHKDEEDPEECAVCLGSFSPGDMCRLMPLCSHYFH 87
L S+ ++ G+ + ++ L F S + ++D ECAVCL F P ++ RL+P C H FH
Sbjct: 94 LSSAARKNSGIDRTVIESLPVFRFASLRGQKDGLECAVCLNRFEPTEILRLLPKCKHAFH 153
Query: 86 VSCADQWLRRHSTCPLCRCSVVP 18
V C D WL HSTCPLCR V P
Sbjct: 154 VECVDTWLDAHSTCPLCRYRVDP 176
>ref|XP_002267344.1| PREDICTED: RING-H2 finger protein ATL43-like [Vitis vinifera]
Length = 404
Score = 84.0 bits (206), Expect = 4e-14
Identities = 37/83 (44%), Positives = 50/83 (60%)
Frame = -1
Query: 266 LPSSTKRVRGLSHSDLKGLSTMVFQSHKDEEDPEECAVCLGSFSPGDMCRLMPLCSHYFH 87
L S+ ++ G+ + ++ L F S + ++D ECAVCL F P ++ RL+P C H FH
Sbjct: 94 LSSAARKNSGIDRTVIESLPVFRFASLRGQKDGLECAVCLNRFEPTEILRLLPKCKHAFH 153
Query: 86 VSCADQWLRRHSTCPLCRCSVVP 18
V C D WL HSTCPLCR V P
Sbjct: 154 VECVDTWLDAHSTCPLCRYRVDP 176
>ref|NP_001066681.1| Os12g0432600 [Oryza sativa Japonica Group]
gi|77554889|gb|ABA97685.1| Zinc finger, C3HC4 type
family protein, expressed [Oryza sativa Japonica Group]
gi|113649188|dbj|BAF29700.1| Os12g0432600 [Oryza sativa
Japonica Group] gi|215766317|dbj|BAG98545.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 185
Score = 83.6 bits (205), Expect = 5e-14
Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 14/110 (12%)
Frame = -1
Query: 308 AIVVALSLWYFW--------------NHLPSSTKRVRGLSHSDLKGLSTMVFQSHKDEED 171
A+++A + W+ W +H P++ RGLS D++ + ++
Sbjct: 60 AVLLAAAGWFTWYYFGAAPAPPVLPDHHQPAAPVEARGLSQEDIEAIPAFEYRRGSSGSG 119
Query: 170 PEECAVCLGSFSPGDMCRLMPLCSHYFHVSCADQWLRRHSTCPLCRCSVV 21
+CAVC+ + GD R +P C H FH C D WLR H+TCP+CR VV
Sbjct: 120 VAQCAVCIAAVKDGDTVRRLPACGHAFHAPCVDGWLRDHATCPMCRADVV 169
>gb|ABK26617.1| unknown [Picea sitchensis]
Length = 186
Score = 83.6 bits (205), Expect = 5e-14
Identities = 52/129 (40%), Positives = 69/129 (53%), Gaps = 26/129 (20%)
Frame = -1
Query: 335 LSWVLLM-GLAIVVALSLWYFW----------NHLPSS----TKRVRGLSHSDLKGLSTM 201
LS++LL G+ VV + LW W PS ++ +GLS +DL+ L T+
Sbjct: 10 LSFLLLCAGIGGVVLVYLWLIWYVSLHEMSNRGRRPSEGNGKAQKQQGLSAADLQRLPTI 69
Query: 200 VFQSHKDEEDPE-----------ECAVCLGSFSPGDMCRLMPLCSHYFHVSCADQWLRRH 54
+ K+EE E ECAVCL F GD CR++P+CSH FHV CAD WL +
Sbjct: 70 --ECGKEEEGEERSSGSRGGGNAECAVCLEIFQNGDRCRVIPVCSHAFHVQCADAWLSKC 127
Query: 53 STCPLCRCS 27
S CP+CR S
Sbjct: 128 SVCPICRRS 136
>gb|AFW70296.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 247
Score = 83.2 bits (204), Expect = 6e-14
Identities = 45/121 (37%), Positives = 57/121 (47%), Gaps = 16/121 (13%)
Frame = -1
Query: 335 LSWVLLMGLAIVVALSLWYFWNHLPS---------STKRVRGLSHSDLKGLSTMVFQSHK 183
+S+ L+ + +V+ WY S KR +GL + L V+Q K
Sbjct: 82 ISFGSLLAILLVMCAIRWYLVRRSASRDATAAAELEKKRSKGLGADAIAALPEFVYQKEK 141
Query: 182 DEEDPEE-------CAVCLGSFSPGDMCRLMPLCSHYFHVSCADQWLRRHSTCPLCRCSV 24
D D EE CAVCLG+ GD +P C H FH C D WLR HSTCP+CR V
Sbjct: 142 DANDGEEEEERELECAVCLGAMVHGDAALRLPPCMHVFHRGCVDVWLREHSTCPVCRAEV 201
Query: 23 V 21
V
Sbjct: 202 V 202
>ref|XP_006494326.1| PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Citrus sinensis]
Length = 428
Score = 82.8 bits (203), Expect = 8e-14
Identities = 36/78 (46%), Positives = 47/78 (60%)
Frame = -1
Query: 257 STKRVRGLSHSDLKGLSTMVFQSHKDEEDPEECAVCLGSFSPGDMCRLMPLCSHYFHVSC 78
ST R G+ + ++ L F S K + ECAVCL F ++ RL+P C H FH+SC
Sbjct: 84 STSRFSGIDKAVIESLPFFRFSSLKGSKQGLECAVCLSKFEDTEILRLLPKCKHAFHISC 143
Query: 77 ADQWLRRHSTCPLCRCSV 24
DQWL +HS+CPLCR V
Sbjct: 144 IDQWLEKHSSCPLCRLKV 161
>ref|XP_006451246.1| hypothetical protein CICLE_v10010254mg [Citrus clementina]
gi|557554472|gb|ESR64486.1| hypothetical protein
CICLE_v10010254mg [Citrus clementina]
Length = 415
Score = 82.8 bits (203), Expect = 8e-14
Identities = 36/78 (46%), Positives = 47/78 (60%)
Frame = -1
Query: 257 STKRVRGLSHSDLKGLSTMVFQSHKDEEDPEECAVCLGSFSPGDMCRLMPLCSHYFHVSC 78
ST R G+ + ++ L F S K + ECAVCL F ++ RL+P C H FH+SC
Sbjct: 71 STSRFSGIDKAVIESLPFFRFSSLKGSKQGLECAVCLSKFEDTEILRLLPKCKHAFHISC 130
Query: 77 ADQWLRRHSTCPLCRCSV 24
DQWL +HS+CPLCR V
Sbjct: 131 IDQWLEKHSSCPLCRLKV 148
>ref|XP_002315508.2| hypothetical protein POPTR_0010s01400g [Populus trichocarpa]
gi|550328861|gb|EEF01679.2| hypothetical protein
POPTR_0010s01400g [Populus trichocarpa]
Length = 291
Score = 82.4 bits (202), Expect = 1e-13
Identities = 37/81 (45%), Positives = 47/81 (58%)
Frame = -1
Query: 257 STKRVRGLSHSDLKGLSTMVFQSHKDEEDPEECAVCLGSFSPGDMCRLMPLCSHYFHVSC 78
+T+ RGL + LK L V+ S K +D ECAVCL F + R +P C+H FH+ C
Sbjct: 80 TTQVTRGLEETVLKSLPVFVY-SEKTHQDSMECAVCLSEFQENETGRTLPKCNHSFHIGC 138
Query: 77 ADQWLRRHSTCPLCRCSVVPL 15
D W HSTCPLCR V P+
Sbjct: 139 IDMWFHSHSTCPLCRSPVEPV 159
>ref|XP_006298704.1| hypothetical protein CARUB_v10014799mg [Capsella rubella]
gi|482567413|gb|EOA31602.1| hypothetical protein
CARUB_v10014799mg [Capsella rubella]
Length = 163
Score = 82.4 bits (202), Expect = 1e-13
Identities = 30/72 (41%), Positives = 48/72 (66%)
Frame = -1
Query: 239 GLSHSDLKGLSTMVFQSHKDEEDPEECAVCLGSFSPGDMCRLMPLCSHYFHVSCADQWLR 60
GL + ++ L ++F+ +E+ EEC +CLG F GD +++P CSH +H C D+WL+
Sbjct: 81 GLDPATIRSLPVVLFRREAADEEEEECCICLGGFEEGDKMKVLPPCSHCYHCECVDRWLK 140
Query: 59 RHSTCPLCRCSV 24
+ S+CPLCR S+
Sbjct: 141 KESSCPLCRVSI 152
>ref|XP_006357148.1| PREDICTED: RING-H2 finger protein ATL3-like [Solanum tuberosum]
Length = 236
Score = 82.0 bits (201), Expect = 1e-13
Identities = 35/75 (46%), Positives = 46/75 (61%)
Frame = -1
Query: 236 LSHSDLKGLSTMVFQSHKDEEDPEECAVCLGSFSPGDMCRLMPLCSHYFHVSCADQWLRR 57
+SH D++ L + FQS P ECAVCL + G+ CRL+PLC+H FH C D WL +
Sbjct: 49 MSHEDIEKLPSYAFQSKDKGTSPIECAVCLDNLKVGEKCRLLPLCNHSFHAECIDLWLLK 108
Query: 56 HSTCPLCRCSVVPLK 12
S CP+CR + LK
Sbjct: 109 TSICPMCRATADFLK 123
>ref|XP_002304259.2| hypothetical protein POPTR_0003s07090g [Populus trichocarpa]
gi|550342602|gb|EEE79238.2| hypothetical protein
POPTR_0003s07090g [Populus trichocarpa]
Length = 277
Score = 82.0 bits (201), Expect = 1e-13
Identities = 39/75 (52%), Positives = 46/75 (61%)
Frame = -1
Query: 242 RGLSHSDLKGLSTMVFQSHKDEEDPEECAVCLGSFSPGDMCRLMPLCSHYFHVSCADQWL 63
RGL S + L ++FQS KD D ECAVCL G+ RL+P C+H FH C D W
Sbjct: 73 RGLDLSIRRSLPVVIFQS-KDFPDGLECAVCLSDVVEGEKARLLPKCNHGFHHDCIDMWF 131
Query: 62 RRHSTCPLCRCSVVP 18
+ HSTCPLCR SV P
Sbjct: 132 QSHSTCPLCRSSVAP 146
>ref|XP_006298197.1| hypothetical protein CARUB_v10014245mg [Capsella rubella]
gi|482566906|gb|EOA31095.1| hypothetical protein
CARUB_v10014245mg [Capsella rubella]
Length = 306
Score = 82.0 bits (201), Expect = 1e-13
Identities = 39/82 (47%), Positives = 46/82 (56%)
Frame = -1
Query: 260 SSTKRVRGLSHSDLKGLSTMVFQSHKDEEDPEECAVCLGSFSPGDMCRLMPLCSHYFHVS 81
SS RGL + +K L F S + +DP ECAVCL F + R++P C H FHV
Sbjct: 88 SSVVASRGLDPNVIKSLPVFTF-SDETHKDPIECAVCLSEFEESESGRVLPNCKHTFHVD 146
Query: 80 CADQWLRRHSTCPLCRCSVVPL 15
C D W HSTCPLCR V PL
Sbjct: 147 CIDMWFHSHSTCPLCRALVEPL 168
>ref|XP_006474307.1| PREDICTED: RING-H2 finger protein ATL43-like [Citrus sinensis]
Length = 445
Score = 81.6 bits (200), Expect = 2e-13
Identities = 39/83 (46%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Frame = -1
Query: 263 PSSTKRVR-GLSHSDLKGLSTMVFQSHKDEEDPEECAVCLGSFSPGDMCRLMPLCSHYFH 87
PSST R G+ + ++ L F + + +D ECAVCL F P ++ RL+P C H FH
Sbjct: 108 PSSTNRKNSGIDRTVIESLPIFRFGALRGHKDGLECAVCLTRFEPTEVLRLLPKCKHAFH 167
Query: 86 VSCADQWLRRHSTCPLCRCSVVP 18
V C D WL HSTCPLCR V P
Sbjct: 168 VECVDTWLDSHSTCPLCRYRVDP 190
>ref|XP_006453207.1| hypothetical protein CICLE_v10010271mg, partial [Citrus clementina]
gi|557556433|gb|ESR66447.1| hypothetical protein
CICLE_v10010271mg, partial [Citrus clementina]
Length = 499
Score = 81.6 bits (200), Expect = 2e-13
Identities = 39/83 (46%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Frame = -1
Query: 263 PSSTKRVR-GLSHSDLKGLSTMVFQSHKDEEDPEECAVCLGSFSPGDMCRLMPLCSHYFH 87
PSST R G+ + ++ L F + + +D ECAVCL F P ++ RL+P C H FH
Sbjct: 187 PSSTNRKNSGIDRTVIESLPIFRFGALRGHKDGLECAVCLTRFEPTEVLRLLPKCKHAFH 246
Query: 86 VSCADQWLRRHSTCPLCRCSVVP 18
V C D WL HSTCPLCR V P
Sbjct: 247 VECVDTWLDSHSTCPLCRYRVDP 269