BLASTX nr result
ID: Ephedra28_contig00020864
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra28_contig00020864 (701 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABG22123.1| polyprotein [Prunus avium] 147 3e-33 gb|ABG22121.1| polyprotein [Solanum melongena] 132 1e-28 gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi] 119 9e-25 gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 110 3e-22 gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa] 104 2e-20 emb|CAN66775.1| hypothetical protein VITISV_035302 [Vitis vinifera] 101 2e-19 gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc... 100 6e-19 emb|CAN79684.1| hypothetical protein VITISV_003855 [Vitis vinifera] 100 6e-19 gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group] 100 6e-19 gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 99 1e-18 emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera] 99 1e-18 emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera] 99 1e-18 gb|AFB73911.1| polyprotein [Citrus sinensis] 99 1e-18 gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 99 1e-18 emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera] 98 2e-18 emb|CAN67902.1| hypothetical protein VITISV_037907 [Vitis vinifera] 98 2e-18 gb|ABG22119.1| polyprotein [Cynara cardunculus var. scolymus] 98 2e-18 gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus] 97 4e-18 emb|CAN81634.1| hypothetical protein VITISV_034565 [Vitis vinifera] 97 4e-18 dbj|BAD34493.1| Gag-Pol [Ipomoea batatas] 97 5e-18 >gb|ABG22123.1| polyprotein [Prunus avium] Length = 276 Score = 147 bits (371), Expect = 3e-33 Identities = 75/114 (65%), Positives = 86/114 (75%) Frame = -2 Query: 343 SLMYAMVCTRPDTLQAVSIIYRYMHNPGKGH*QAIK*IL*NILGTIDIGLLFQRDYAIG* 164 SLMYAMVCTRPD QAVSI+ RYMHNPGKGH QA+K IL ILGT+D+GLLFQ+D G Sbjct: 111 SLMYAMVCTRPDISQAVSIVSRYMHNPGKGHWQAVKWILRYILGTVDVGLLFQQDKVSGQ 170 Query: 163 SIIGCVNSDYAGNLDNCRSTIHFVFTLVGDLVCWRSTLQPTFFLLITEVEYMAI 2 ++G V+SDYAG+LD RST FVFT+ G V WRS LQ T L TE EYMA+ Sbjct: 171 CVVGYVDSDYAGDLDKRRSTTGFVFTIAGGPVSWRSILQSTVALSTTEAEYMAV 224 >gb|ABG22121.1| polyprotein [Solanum melongena] Length = 361 Score = 132 bits (332), Expect = 1e-28 Identities = 67/114 (58%), Positives = 84/114 (73%) Frame = -2 Query: 343 SLMYAMVCTRPDTLQAVSIIYRYMHNPGKGH*QAIK*IL*NILGTIDIGLLFQRDYAIG* 164 SLMYAMVCTR D QAVS++ RYMH+PGKGH QA+K IL I T+DIGL+F++D ++G Sbjct: 196 SLMYAMVCTRSDISQAVSVVSRYMHDPGKGHWQAVKWILRYIKNTVDIGLVFEQDKSLGS 255 Query: 163 SIIGCVNSDYAGNLDNCRSTIHFVFTLVGDLVCWRSTLQPTFFLLITEVEYMAI 2 ++G +SDYAG+LD RST ++FTL V W+STLQ T L TE EYMAI Sbjct: 256 CVVGYCDSDYAGDLDKRRSTTGYLFTLAKGPVSWKSTLQATVALSTTEAEYMAI 309 >gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi] Length = 297 Score = 119 bits (298), Expect = 9e-25 Identities = 63/116 (54%), Positives = 81/116 (69%) Frame = -2 Query: 352 IMHSLMYAMVCTRPDTLQAVSIIYRYMHNPGKGH*QAIK*IL*NILGTIDIGLLFQRDYA 173 ++ SL+YAMVCTRPD QAVS++ RYMHNPGK A+K IL + GT+D+GLLF+++ Sbjct: 81 VVGSLIYAMVCTRPDISQAVSMVSRYMHNPGKSQWLAVKWILRYLYGTVDVGLLFKKN-- 138 Query: 172 IG*SIIGCVNSDYAGNLDNCRSTIHFVFTLVGDLVCWRSTLQPTFFLLITEVEYMA 5 G +G +SD+AG+LD RST +VFTL G V WRS LQ T L TE EY+A Sbjct: 139 CGQQCVGYCDSDFAGDLDKQRSTSGYVFTLGGGSVSWRSILQSTIALSTTEAEYIA 194 >gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1| copia LTR rider [Solanum lycopersicum] Length = 1307 Score = 110 bits (276), Expect = 3e-22 Identities = 58/114 (50%), Positives = 76/114 (66%) Frame = -2 Query: 343 SLMYAMVCTRPDTLQAVSIIYRYMHNPGKGH*QAIK*IL*NILGTIDIGLLFQRDYAIG* 164 SLMYAMVCTRPD AVS++ R+M PG+ H QA+K I + GT D+GL++ D Sbjct: 1098 SLMYAMVCTRPDLAHAVSVVSRFMGQPGREHWQAVKRIFRYLRGTSDVGLIYGGDTQC-- 1155 Query: 163 SIIGCVNSDYAGNLDNCRSTIHFVFTLVGDLVCWRSTLQPTFFLLITEVEYMAI 2 + G +SDYAG++D RS +VFTL G +V W++TLQPT L TE EYMA+ Sbjct: 1156 LVTGYSDSDYAGDVDTRRSMTGYVFTLGGSVVSWKATLQPTVTLSTTEAEYMAL 1209 >gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa] Length = 1297 Score = 104 bits (260), Expect = 2e-20 Identities = 54/113 (47%), Positives = 74/113 (65%) Frame = -2 Query: 340 LMYAMVCTRPDTLQAVSIIYRYMHNPGKGH*QAIK*IL*NILGTIDIGLLFQRDYAIG*S 161 LMYAM+CTRPD QA+S++ +YM NPGK H +A+K I + T +G++F+R Sbjct: 1090 LMYAMICTRPDLAQAMSVVSKYMSNPGKRHWEAVKWIFKYLKNTRQLGIMFERRQGEA-C 1148 Query: 160 IIGCVNSDYAGNLDNCRSTIHFVFTLVGDLVCWRSTLQPTFFLLITEVEYMAI 2 + G V+SD+AG+LD RST +VFT G V W++TLQ L TE EYMA+ Sbjct: 1149 VAGFVDSDFAGDLDRRRSTAGYVFTCGGGPVSWKATLQAVTALSTTEAEYMAL 1201 >emb|CAN66775.1| hypothetical protein VITISV_035302 [Vitis vinifera] Length = 734 Score = 101 bits (252), Expect = 2e-19 Identities = 50/114 (43%), Positives = 75/114 (65%) Frame = -2 Query: 343 SLMYAMVCTRPDTLQAVSIIYRYMHNPGKGH*QAIK*IL*NILGTIDIGLLFQRDYAIG* 164 S+MY MVCTR + AVS++ RYM +P K H QA+K IL ++ GT +GL++ +++ I Sbjct: 593 SIMYVMVCTRLEKSHAVSVVSRYMDHPEKIHWQAVKWILRHLRGTSHVGLVYDKNFDISR 652 Query: 163 SIIGCVNSDYAGNLDNCRSTIHFVFTLVGDLVCWRSTLQPTFFLLITEVEYMAI 2 I+G V+ DY G+LD RS +VFTL G+++ W++TLQ T L E + M + Sbjct: 653 GIVGYVDFDYVGDLDRRRSLTRYVFTLCGNVISWKATLQSTIALSTIEAKCMIV 706 >gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1138 Score = 100 bits (248), Expect = 6e-19 Identities = 55/117 (47%), Positives = 74/117 (63%) Frame = -2 Query: 352 IMHSLMYAMVCTRPDTLQAVSIIYRYMHNPGKGH*QAIK*IL*NILGTIDIGLLFQRDYA 173 ++ SLMYAMVC+RPD A+S++ RYM NPGK H +A++ I + GT L F R Sbjct: 925 VVGSLMYAMVCSRPDLSHALSVVSRYMANPGKEHWKAVQWIFRYLCGTSSACLQFGRSRD 984 Query: 172 IG*SIIGCVNSDYAGNLDNCRSTIHFVFTLVGDLVCWRSTLQPTFFLLITEVEYMAI 2 ++G V+SD+AG+LD RS +VFT+ G V W++ LQ T L TE EYMAI Sbjct: 985 ---GLVGYVDSDFAGDLDRRRSLAGYVFTIGGCAVSWKANLQATVALSTTEAEYMAI 1038 >emb|CAN79684.1| hypothetical protein VITISV_003855 [Vitis vinifera] Length = 406 Score = 100 bits (248), Expect = 6e-19 Identities = 53/113 (46%), Positives = 74/113 (65%) Frame = -2 Query: 340 LMYAMVCTRPDTLQAVSIIYRYMHNPGKGH*QAIK*IL*NILGTIDIGLLFQRDYAIG*S 161 LMYAMVCTR D AVS++ +++ NPG+ + A+K I + GT D G+ F + + S Sbjct: 199 LMYAMVCTRLDLAHAVSVVSKFLSNPGRMNWDAVKWIFRYLRGTTDYGITFSKQQSDP-S 257 Query: 160 IIGCVNSDYAGNLDNCRSTIHFVFTLVGDLVCWRSTLQPTFFLLITEVEYMAI 2 + G V++DYAG+LD RSTI +VFTL G +CW+S +Q L T+ EYMAI Sbjct: 258 VKGYVDADYAGDLDERRSTIGYVFTLGGGPICWKSMIQSLVALYTTKSEYMAI 310 >gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1243 Score = 100 bits (248), Expect = 6e-19 Identities = 55/114 (48%), Positives = 73/114 (64%) Frame = -2 Query: 343 SLMYAMVCTRPDTLQAVSIIYRYMHNPGKGH*QAIK*IL*NILGTIDIGLLFQRDYAIG* 164 SLMYAMVC RPD A+S++ RYM NPGK H +A++ I + GT L F+R Sbjct: 1094 SLMYAMVCCRPDLSHALSVVNRYMANPGKEHWKAVQWIFRYLRGTSSACLQFERSRD--- 1150 Query: 163 SIIGCVNSDYAGNLDNCRSTIHFVFTLVGDLVCWRSTLQPTFFLLITEVEYMAI 2 ++G V+SD+AG+LD RS +VFT+ G V W+++LQ T L TE EYMAI Sbjct: 1151 GLVGYVDSDFAGDLDRRRSITGYVFTIGGCAVSWKASLQATVALSTTEAEYMAI 1204 >gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa Japonica Group] gi|77548751|gb|ABA91548.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 2340 Score = 99.4 bits (246), Expect = 1e-18 Identities = 55/114 (48%), Positives = 73/114 (64%) Frame = -2 Query: 343 SLMYAMVCTRPDTLQAVSIIYRYMHNPGKGH*QAIK*IL*NILGTIDIGLLFQRDYAIG* 164 SLMYAMVC+RPD A+S++ RYM NPGK H +A++ I + GT L F R Sbjct: 1329 SLMYAMVCSRPDLSHALSVVSRYMANPGKEHWKAVQWIFRYLRGTSSACLQFGRSRD--- 1385 Query: 163 SIIGCVNSDYAGNLDNCRSTIHFVFTLVGDLVCWRSTLQPTFFLLITEVEYMAI 2 ++G V+SD+AG+LD RS +VFT+ G V W+++LQ T L TE EYMAI Sbjct: 1386 GLVGYVDSDFAGDLDRGRSLAGYVFTIGGCAVSWKASLQATVALSTTEAEYMAI 1439 >emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera] Length = 1562 Score = 99.4 bits (246), Expect = 1e-18 Identities = 52/118 (44%), Positives = 78/118 (66%), Gaps = 1/118 (0%) Frame = -2 Query: 352 IMHSLMYAMVCTRPDTLQAVSIIYRYMHNPGKGH*QAIK*IL*NILGTIDIGLLF-QRDY 176 ++ SLMYAMVCTRPD AVS++ R+M NPGK H +A+K I+ + G+ + L++ D Sbjct: 1182 VVGSLMYAMVCTRPDLAFAVSVVSRFMSNPGKAHWEAVKWIMRYLKGSSSVCLVYGNGDV 1241 Query: 175 AIG*SIIGCVNSDYAGNLDNCRSTIHFVFTLVGDLVCWRSTLQPTFFLLITEVEYMAI 2 + G ++G +SD+ G+L RS ++FTL G + WR++LQPT L TE EYM++ Sbjct: 1242 SSG--LVGFTDSDHGGDLMKRRSLTCYIFTLFGCAISWRASLQPTVALSTTEAEYMSL 1297 >emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera] Length = 1643 Score = 99.4 bits (246), Expect = 1e-18 Identities = 52/118 (44%), Positives = 78/118 (66%), Gaps = 1/118 (0%) Frame = -2 Query: 352 IMHSLMYAMVCTRPDTLQAVSIIYRYMHNPGKGH*QAIK*IL*NILGTIDIGLLF-QRDY 176 ++ SLMYAMVCTRPD AVS++ R+M NPGK H +A+K I+ + G+ + L++ D Sbjct: 1419 VVGSLMYAMVCTRPDLAFAVSVVSRFMSNPGKAHWEAVKWIMRYLKGSSSVCLVYGNGDV 1478 Query: 175 AIG*SIIGCVNSDYAGNLDNCRSTIHFVFTLVGDLVCWRSTLQPTFFLLITEVEYMAI 2 + G ++G +SD+ G+L RS ++FTL G + WR++LQPT L TE EYM++ Sbjct: 1479 SSG--LVGFTDSDHGGDLMKRRSLTCYIFTLFGCAISWRASLQPTVALSTTEAEYMSL 1534 >gb|AFB73911.1| polyprotein [Citrus sinensis] Length = 1309 Score = 99.0 bits (245), Expect = 1e-18 Identities = 56/113 (49%), Positives = 70/113 (61%) Frame = -2 Query: 343 SLMYAMVCTRPDTLQAVSIIYRYMHNPGKGH*QAIK*IL*NILGTIDIGLLFQRDYAIG* 164 SLM+AM+CTRPD QAV ++ RYM NPG H A+K IL I GT D+ L + Sbjct: 1098 SLMFAMICTRPDIAQAVGVVSRYMANPGGEHWIAVKRILRYIRGTSDVALCYGGSEF--- 1154 Query: 163 SIIGCVNSDYAGNLDNCRSTIHFVFTLVGDLVCWRSTLQPTFFLLITEVEYMA 5 ++ G V+SD+AG+LD +ST +VFTL G V W S LQ L TE EYMA Sbjct: 1155 TVRGYVDSDFAGDLDKRKSTTGYVFTLAGAAVSWVSKLQTVVALSTTEAEYMA 1207 >gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1241 Score = 99.0 bits (245), Expect = 1e-18 Identities = 55/114 (48%), Positives = 73/114 (64%) Frame = -2 Query: 343 SLMYAMVCTRPDTLQAVSIIYRYMHNPGKGH*QAIK*IL*NILGTIDIGLLFQRDYAIG* 164 SLMYAMVC+RPD A+S++ RYM NPGK H +A++ I + GT L F R Sbjct: 1031 SLMYAMVCSRPDLSHALSVVSRYMANPGKEHWKAVQWIFRYLRGTSSACLQFGRSSD--- 1087 Query: 163 SIIGCVNSDYAGNLDNCRSTIHFVFTLVGDLVCWRSTLQPTFFLLITEVEYMAI 2 ++G V+SD+AG+LD RS +VFT+ G V W+++LQ T L TE EYMAI Sbjct: 1088 GLVGYVDSDFAGDLDRRRSLTGYVFTVGGCAVSWKASLQATVALSTTEAEYMAI 1141 >emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera] Length = 1208 Score = 98.2 bits (243), Expect = 2e-18 Identities = 51/114 (44%), Positives = 71/114 (62%) Frame = -2 Query: 343 SLMYAMVCTRPDTLQAVSIIYRYMHNPGKGH*QAIK*IL*NILGTIDIGLLFQRDYAIG* 164 S+MY MVC+RPD AVS+I RYM PGK H QA+K + + GT +GL++ + + Sbjct: 994 SVMYTMVCSRPDLAYAVSMISRYMSCPGKPHWQAVKWLFQYLAGTRSLGLVYGGNSQLET 1053 Query: 163 SIIGCVNSDYAGNLDNCRSTIHFVFTLVGDLVCWRSTLQPTFFLLITEVEYMAI 2 + G V++DYAGN+D +S +VFT G V W++ LQ L TE EYMA+ Sbjct: 1054 QLQGFVDADYAGNIDTRKSLTGYVFTXFGGAVSWKANLQSVVALSTTEAEYMAM 1107 >emb|CAN67902.1| hypothetical protein VITISV_037907 [Vitis vinifera] Length = 735 Score = 98.2 bits (243), Expect = 2e-18 Identities = 51/114 (44%), Positives = 72/114 (63%) Frame = -2 Query: 343 SLMYAMVCTRPDTLQAVSIIYRYMHNPGKGH*QAIK*IL*NILGTIDIGLLFQRDYAIG* 164 S+MY MVC+RPD AVS+I RYM GK H QA+K + + GT +GL++ + +G Sbjct: 521 SVMYTMVCSRPDLAYAVSMIRRYMSCLGKPHWQAVKWLFQYLAGTRSLGLVYGGNSQLGT 580 Query: 163 SIIGCVNSDYAGNLDNCRSTIHFVFTLVGDLVCWRSTLQPTFFLLITEVEYMAI 2 + G V++DY GN+D +S I +VFT+ G V W++ LQ L TE EYMA+ Sbjct: 581 QLQGFVDADYPGNIDTRKSLIGYVFTVFGGAVSWKANLQSVVALSATEAEYMAM 634 >gb|ABG22119.1| polyprotein [Cynara cardunculus var. scolymus] Length = 358 Score = 98.2 bits (243), Expect = 2e-18 Identities = 54/116 (46%), Positives = 73/116 (62%), Gaps = 2/116 (1%) Frame = -2 Query: 343 SLMYAMVCTRPDTLQAVSIIYRYMHNPGKGH*QAIK*IL*NILGTIDIGLLF--QRDYAI 170 SLMYAM+CTRPD AVS++ RYM NPG+ H +A++ +L + GT D + F RD Sbjct: 195 SLMYAMICTRPDLAYAVSMVSRYMANPGREHWKAVQWVLRYLSGTRDYCMCFGTSRD--- 251 Query: 169 G*SIIGCVNSDYAGNLDNCRSTIHFVFTLVGDLVCWRSTLQPTFFLLITEVEYMAI 2 + G V+SDY G+LD RS +VFT+ + W++ LQPT + TE EYMAI Sbjct: 252 --GVQGYVDSDYGGDLDGRRSLTGYVFTMGSCAISWKAVLQPTVAVSTTEAEYMAI 305 >gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus] Length = 1305 Score = 97.4 bits (241), Expect = 4e-18 Identities = 57/113 (50%), Positives = 68/113 (60%) Frame = -2 Query: 343 SLMYAMVCTRPDTLQAVSIIYRYMHNPGKGH*QAIK*IL*NILGTIDIGLLFQRDYAIG* 164 SLMYAM+CTRPD QAV + R+M +PGK H A+K IL I GT L F Sbjct: 1094 SLMYAMICTRPDIAQAVGTVSRFMADPGKEHWNAVKRILRYIRGTSGAALCFGGSEF--- 1150 Query: 163 SIIGCVNSDYAGNLDNCRSTIHFVFTLVGDLVCWRSTLQPTFFLLITEVEYMA 5 +I G V+SD+AG+LD +ST +VFTL G V W S LQ L TE EYMA Sbjct: 1151 TIRGYVDSDFAGDLDKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTTEAEYMA 1203 >emb|CAN81634.1| hypothetical protein VITISV_034565 [Vitis vinifera] Length = 595 Score = 97.4 bits (241), Expect = 4e-18 Identities = 52/112 (46%), Positives = 71/112 (63%) Frame = -2 Query: 337 MYAMVCTRPDTLQAVSIIYRYMHNPGKGH*QAIK*IL*NILGTIDIGLLFQRDYAIG*SI 158 MYAMVC RPD VS++ +++ NPG+ H AIK I + G G++F + + SI Sbjct: 471 MYAMVCIRPDLAHTVSVVSKFLSNPGRMHWDAIKWIFRYLRGXTYYGIMFSKQQSDP-SI 529 Query: 157 IGCVNSDYAGNLDNCRSTIHFVFTLVGDLVCWRSTLQPTFFLLITEVEYMAI 2 G V++DYAG+LD+ RST +VFTL G +CW+S +Q L TE EYMAI Sbjct: 530 RGYVDADYAGDLDDRRSTTGYVFTLGGGPICWKSMVQSLVALFTTESEYMAI 581 >dbj|BAD34493.1| Gag-Pol [Ipomoea batatas] Length = 1298 Score = 97.1 bits (240), Expect = 5e-18 Identities = 54/113 (47%), Positives = 68/113 (60%) Frame = -2 Query: 343 SLMYAMVCTRPDTLQAVSIIYRYMHNPGKGH*QAIK*IL*NILGTIDIGLLFQRDYAIG* 164 SLM+AM+CTRPD QAV ++ RYM NPG+ H +K IL I GT D+ L + I Sbjct: 1087 SLMFAMICTRPDIAQAVGVVSRYMANPGREHWNCVKRILRYIKGTSDVALCYGGSDFI-- 1144 Query: 163 SIIGCVNSDYAGNLDNCRSTIHFVFTLVGDLVCWRSTLQPTFFLLITEVEYMA 5 I G V+SDYAG+LD +ST +VF + G V W S LQ TE EY+A Sbjct: 1145 -INGYVDSDYAGDLDKSKSTTGYVFKVAGGAVSWVSKLQAVVATSTTEAEYVA 1196