BLASTX nr result
ID: Ephedra28_contig00020807
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00020807
(590 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABR16456.1| unknown [Picea sitchensis] 97 2e-18
ref|NP_001066267.1| Os12g0170100 [Oryza sativa Japonica Group] g... 97 3e-18
gb|EAY82409.1| hypothetical protein OsI_37623 [Oryza sativa Indi... 97 3e-18
dbj|BAB17739.1| putative DNA-binding protein [Oryza sativa Japon... 97 4e-18
ref|NP_001042753.2| Os01g0280400 [Oryza sativa Japonica Group] g... 97 4e-18
gb|EAY73527.1| hypothetical protein OsI_01409 [Oryza sativa Indi... 97 4e-18
dbj|BAD81093.1| putative DNA-binding protein [Oryza sativa Japon... 97 4e-18
ref|NP_001147602.1| DNA-binding protein [Zea mays] gi|195612448|... 94 2e-17
ref|XP_006644067.1| PREDICTED: pentatricopeptide repeat-containi... 94 3e-17
ref|XP_002308888.2| hypothetical protein POPTR_0006s03790g [Popu... 92 8e-17
ref|XP_004162628.1| PREDICTED: pentatricopeptide repeat-containi... 92 1e-16
ref|XP_004136635.1| PREDICTED: pentatricopeptide repeat-containi... 92 1e-16
ref|XP_004136774.1| PREDICTED: pentatricopeptide repeat-containi... 92 1e-16
gb|AFW79512.1| DNA-binding protein [Zea mays] 92 1e-16
gb|ACF82606.1| unknown [Zea mays] 92 1e-16
gb|EMT04005.1| hypothetical protein F775_26459 [Aegilops tauschii] 91 2e-16
gb|EMS51226.1| hypothetical protein TRIUR3_21577 [Triticum urartu] 91 2e-16
gb|AAF32491.1|AF091837_1 DNA-binding protein [Triticum aestivum] 91 2e-16
gb|EXC46728.1| hypothetical protein L484_002071 [Morus notabilis] 90 5e-16
ref|XP_003567340.1| PREDICTED: pentatricopeptide repeat-containi... 89 7e-16
>gb|ABR16456.1| unknown [Picea sitchensis]
Length = 600
Score = 97.4 bits (241), Expect = 2e-18
Identities = 47/106 (44%), Positives = 70/106 (66%)
Frame = -3
Query: 588 GDLEKAIDIMSKASVQKEYKPKYMTILLVLNRLADKGDIPNAEKCFQIARQFGYKGRVEL 409
G+LEKA I+ KA QK+ +PKY T++ +L + A++GD+ NAEK F RQ GY G
Sbjct: 488 GELEKADSILFKACNQKQLRPKYWTMVTILEKYAERGDVANAEKIFDRMRQAGYTGSAGA 547
Query: 408 FESLLQAYVSAGVPSYGFKERMMADKCVPSRHISILLQNLEKKNKD 271
F SLL++Y +A VP+YGF+ERM ADK + ++ L++ ++ D
Sbjct: 548 FASLLKSYANARVPAYGFRERMKADKIYLNGRLNSLMEQVDAFKSD 593
>ref|NP_001066267.1| Os12g0170100 [Oryza sativa Japonica Group]
gi|77553759|gb|ABA96555.1| DNA-binding protein,
putative, expressed [Oryza sativa Japonica Group]
gi|113648774|dbj|BAF29286.1| Os12g0170100 [Oryza sativa
Japonica Group] gi|125578643|gb|EAZ19789.1| hypothetical
protein OsJ_35368 [Oryza sativa Japonica Group]
gi|215767656|dbj|BAG99884.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 611
Score = 97.1 bits (240), Expect = 3e-18
Identities = 47/105 (44%), Positives = 68/105 (64%)
Frame = -3
Query: 588 GDLEKAIDIMSKASVQKEYKPKYMTILLVLNRLADKGDIPNAEKCFQIARQFGYKGRVEL 409
G++EKA I+ K S + + KP Y T L++L+ + KGD+ NAEK F RQ GY GR+
Sbjct: 498 GEVEKADSILHKLSYKNKIKPMYTTYLMLLDSYSKKGDVHNAEKLFSKVRQMGYTGRIRQ 557
Query: 408 FESLLQAYVSAGVPSYGFKERMMADKCVPSRHISILLQNLEKKNK 274
++ LL+AY++A P YGFKERM AD P+R ++ LL + N+
Sbjct: 558 YQLLLEAYLNAKTPPYGFKERMKADDIFPNRAVASLLAATDPFNR 602
>gb|EAY82409.1| hypothetical protein OsI_37623 [Oryza sativa Indica Group]
Length = 611
Score = 97.1 bits (240), Expect = 3e-18
Identities = 47/105 (44%), Positives = 68/105 (64%)
Frame = -3
Query: 588 GDLEKAIDIMSKASVQKEYKPKYMTILLVLNRLADKGDIPNAEKCFQIARQFGYKGRVEL 409
G++EKA I+ K S + + KP Y T L++L+ + KGD+ NAEK F RQ GY GR+
Sbjct: 498 GEVEKADSILHKLSYKNKIKPMYTTYLMLLDSYSKKGDVHNAEKLFSKVRQMGYTGRIRQ 557
Query: 408 FESLLQAYVSAGVPSYGFKERMMADKCVPSRHISILLQNLEKKNK 274
++ LL+AY++A P YGFKERM AD P+R ++ LL + N+
Sbjct: 558 YQLLLEAYLNAKTPPYGFKERMKADDIFPNRAVASLLAATDPFNR 602
>dbj|BAB17739.1| putative DNA-binding protein [Oryza sativa Japonica Group]
Length = 591
Score = 96.7 bits (239), Expect = 4e-18
Identities = 47/105 (44%), Positives = 68/105 (64%)
Frame = -3
Query: 588 GDLEKAIDIMSKASVQKEYKPKYMTILLVLNRLADKGDIPNAEKCFQIARQFGYKGRVEL 409
G++EKA I+ K S + + KP Y T L++L+ + KGD+ NAEK F RQ GY GR+
Sbjct: 478 GEVEKADSILHKLSYKNKIKPLYTTYLMLLDSYSKKGDVHNAEKLFSKVRQMGYTGRIRQ 537
Query: 408 FESLLQAYVSAGVPSYGFKERMMADKCVPSRHISILLQNLEKKNK 274
++ LL+AY++A P YGFKERM AD P+R ++ LL + N+
Sbjct: 538 YQLLLEAYLNAKTPPYGFKERMKADDIFPNRAVASLLAATDPFNR 582
>ref|NP_001042753.2| Os01g0280400 [Oryza sativa Japonica Group]
gi|255673117|dbj|BAF04667.2| Os01g0280400, partial
[Oryza sativa Japonica Group]
Length = 426
Score = 96.7 bits (239), Expect = 4e-18
Identities = 47/105 (44%), Positives = 68/105 (64%)
Frame = -3
Query: 588 GDLEKAIDIMSKASVQKEYKPKYMTILLVLNRLADKGDIPNAEKCFQIARQFGYKGRVEL 409
G++EKA I+ K S + + KP Y T L++L+ + KGD+ NAEK F RQ GY GR+
Sbjct: 313 GEVEKADSILHKLSYKNKIKPLYTTYLMLLDSYSKKGDVHNAEKLFSKVRQMGYTGRIRQ 372
Query: 408 FESLLQAYVSAGVPSYGFKERMMADKCVPSRHISILLQNLEKKNK 274
++ LL+AY++A P YGFKERM AD P+R ++ LL + N+
Sbjct: 373 YQLLLEAYLNAKTPPYGFKERMKADDIFPNRAVASLLAATDPFNR 417
>gb|EAY73527.1| hypothetical protein OsI_01409 [Oryza sativa Indica Group]
Length = 611
Score = 96.7 bits (239), Expect = 4e-18
Identities = 47/105 (44%), Positives = 68/105 (64%)
Frame = -3
Query: 588 GDLEKAIDIMSKASVQKEYKPKYMTILLVLNRLADKGDIPNAEKCFQIARQFGYKGRVEL 409
G++EKA I+ K S + + KP Y T L++L+ + KGD+ NAEK F RQ GY GR+
Sbjct: 498 GEVEKADSILHKLSYKNKIKPLYTTYLMLLDSYSKKGDVHNAEKLFSKVRQMGYTGRIRQ 557
Query: 408 FESLLQAYVSAGVPSYGFKERMMADKCVPSRHISILLQNLEKKNK 274
++ LL+AY++A P YGFKERM AD P+R ++ LL + N+
Sbjct: 558 YQLLLEAYLNAKTPPYGFKERMKADDIFPNRAVASLLAATDPFNR 602
>dbj|BAD81093.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|56784204|dbj|BAD81589.1| putative DNA-binding protein
[Oryza sativa Japonica Group]
gi|125569936|gb|EAZ11451.1| hypothetical protein
OsJ_01319 [Oryza sativa Japonica Group]
Length = 611
Score = 96.7 bits (239), Expect = 4e-18
Identities = 47/105 (44%), Positives = 68/105 (64%)
Frame = -3
Query: 588 GDLEKAIDIMSKASVQKEYKPKYMTILLVLNRLADKGDIPNAEKCFQIARQFGYKGRVEL 409
G++EKA I+ K S + + KP Y T L++L+ + KGD+ NAEK F RQ GY GR+
Sbjct: 498 GEVEKADSILHKLSYKNKIKPLYTTYLMLLDSYSKKGDVHNAEKLFSKVRQMGYTGRIRQ 557
Query: 408 FESLLQAYVSAGVPSYGFKERMMADKCVPSRHISILLQNLEKKNK 274
++ LL+AY++A P YGFKERM AD P+R ++ LL + N+
Sbjct: 558 YQLLLEAYLNAKTPPYGFKERMKADDIFPNRAVASLLAATDPFNR 602
>ref|NP_001147602.1| DNA-binding protein [Zea mays] gi|195612448|gb|ACG28054.1|
DNA-binding protein [Zea mays]
Length = 622
Score = 94.4 bits (233), Expect = 2e-17
Identities = 44/97 (45%), Positives = 64/97 (65%)
Frame = -3
Query: 588 GDLEKAIDIMSKASVQKEYKPKYMTILLVLNRLADKGDIPNAEKCFQIARQFGYKGRVEL 409
G++EKA ++ K S+Q KP Y T + +L+ + KGD+ N+EK F RQ GY GR+ +
Sbjct: 509 GEVEKAESLVHKLSIQNHIKPIYNTYMTLLDSYSKKGDVRNSEKVFNKLRQSGYTGRIRM 568
Query: 408 FESLLQAYVSAGVPSYGFKERMMADKCVPSRHISILL 298
++SLL AYV A P+YGF+ERM AD P+ +S L+
Sbjct: 569 YQSLLHAYVHAKAPAYGFRERMKADNIFPNSAVSTLI 605
>ref|XP_006644067.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Oryza brachyantha]
Length = 594
Score = 93.6 bits (231), Expect = 3e-17
Identities = 47/105 (44%), Positives = 68/105 (64%)
Frame = -3
Query: 588 GDLEKAIDIMSKASVQKEYKPKYMTILLVLNRLADKGDIPNAEKCFQIARQFGYKGRVEL 409
G++EKA I+ K S + + KP Y T L++L+ + KGDI NAEK F RQ GY GR+
Sbjct: 481 GEVEKADSILHKLSHKDKIKPMYNTYLMLLDSYSKKGDIHNAEKLFSKIRQMGYTGRIRQ 540
Query: 408 FESLLQAYVSAGVPSYGFKERMMADKCVPSRHISILLQNLEKKNK 274
++ LL+AY++A P YGF+ERM AD P+R ++ LL + N+
Sbjct: 541 YQLLLEAYLNAKAPIYGFRERMKADDIFPNRVVASLLAATDPFNR 585
>ref|XP_002308888.2| hypothetical protein POPTR_0006s03790g [Populus trichocarpa]
gi|550335400|gb|EEE92411.2| hypothetical protein
POPTR_0006s03790g [Populus trichocarpa]
Length = 623
Score = 92.4 bits (228), Expect = 8e-17
Identities = 43/101 (42%), Positives = 66/101 (65%)
Frame = -3
Query: 588 GDLEKAIDIMSKASVQKEYKPKYMTILLVLNRLADKGDIPNAEKCFQIARQFGYKGRVEL 409
G++EKA I++KA Q + KP Y + L+++ R A KGDI NAEK F RQ GY+ R+
Sbjct: 511 GEVEKADSILNKAVQQNKIKPMYSSFLIIMERYATKGDIHNAEKMFHRMRQAGYQARIRQ 570
Query: 408 FESLLQAYVSAGVPSYGFKERMMADKCVPSRHISILLQNLE 286
F++L+QAY+ A P YG +ER+ AD P++ ++ L ++
Sbjct: 571 FQTLIQAYIIAKAPCYGMRERLKADGIFPNKSLAAQLAQVD 611
>ref|XP_004162628.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 613
Score = 92.0 bits (227), Expect = 1e-16
Identities = 40/94 (42%), Positives = 66/94 (70%)
Frame = -3
Query: 588 GDLEKAIDIMSKASVQKEYKPKYMTILLVLNRLADKGDIPNAEKCFQIARQFGYKGRVEL 409
G++EKA + K +Q + KP + T + +++R A +GD+PNAEK F + R++GY GR+
Sbjct: 501 GEVEKADSFLVKTVLQYKKKPMFTTYITLMDRYASRGDVPNAEKIFGMMRKYGYVGRLSQ 560
Query: 408 FESLLQAYVSAGVPSYGFKERMMADKCVPSRHIS 307
F++L+QAYV+A P+YG +ERM AD P++ ++
Sbjct: 561 FQTLIQAYVNAKAPAYGMRERMKADSVFPNKALA 594
>ref|XP_004136635.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 92.0 bits (227), Expect = 1e-16
Identities = 40/94 (42%), Positives = 66/94 (70%)
Frame = -3
Query: 588 GDLEKAIDIMSKASVQKEYKPKYMTILLVLNRLADKGDIPNAEKCFQIARQFGYKGRVEL 409
G++EKA + K +Q + KP + T + +++R A +GD+PNAEK F + R++GY GR+
Sbjct: 493 GEVEKADSFLVKTVLQYKKKPMFTTYITLMDRYASRGDVPNAEKIFGMMRKYGYVGRLSQ 552
Query: 408 FESLLQAYVSAGVPSYGFKERMMADKCVPSRHIS 307
F++L+QAYV+A P+YG +ERM AD P++ ++
Sbjct: 553 FQTLIQAYVNAKAPAYGMRERMKADSVFPNKALA 586
>ref|XP_004136774.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 604
Score = 91.7 bits (226), Expect = 1e-16
Identities = 40/94 (42%), Positives = 65/94 (69%)
Frame = -3
Query: 588 GDLEKAIDIMSKASVQKEYKPKYMTILLVLNRLADKGDIPNAEKCFQIARQFGYKGRVEL 409
G++EKA + KA +Q + KP + T + +++R A +GD+PN EK F + R+ GY GR+
Sbjct: 492 GEVEKADSFLVKAVLQNKKKPMFTTYITLMDRYASRGDVPNVEKNFAMMRRLGYVGRLSQ 551
Query: 408 FESLLQAYVSAGVPSYGFKERMMADKCVPSRHIS 307
F++L+QAYV+A P+YG +ERM AD P++ ++
Sbjct: 552 FQTLIQAYVNAKAPAYGMRERMKADNVFPNKDLA 585
>gb|AFW79512.1| DNA-binding protein [Zea mays]
Length = 622
Score = 91.7 bits (226), Expect = 1e-16
Identities = 43/97 (44%), Positives = 63/97 (64%)
Frame = -3
Query: 588 GDLEKAIDIMSKASVQKEYKPKYMTILLVLNRLADKGDIPNAEKCFQIARQFGYKGRVEL 409
G++EKA ++ K S+Q KP Y T + +L+ + KGD+ N+EK F RQ GY GR+ +
Sbjct: 509 GEVEKAESLVHKLSIQNHIKPIYNTYMTLLDSYSKKGDVRNSEKVFNKLRQSGYTGRIRM 568
Query: 408 FESLLQAYVSAGVPSYGFKERMMADKCVPSRHISILL 298
++ LL AYV A P+YGF+ERM AD P+ +S L+
Sbjct: 569 YQVLLHAYVRAKAPAYGFRERMKADNIFPNSVVSTLI 605
>gb|ACF82606.1| unknown [Zea mays]
Length = 172
Score = 91.7 bits (226), Expect = 1e-16
Identities = 43/97 (44%), Positives = 63/97 (64%)
Frame = -3
Query: 588 GDLEKAIDIMSKASVQKEYKPKYMTILLVLNRLADKGDIPNAEKCFQIARQFGYKGRVEL 409
G++EKA ++ K S+Q KP Y T + +L+ + KGD+ N+EK F RQ GY GR+ +
Sbjct: 59 GEVEKAESLVHKLSIQNHIKPIYNTYMTLLDSYSKKGDVRNSEKVFNKLRQSGYTGRIRM 118
Query: 408 FESLLQAYVSAGVPSYGFKERMMADKCVPSRHISILL 298
++ LL AYV A P+YGF+ERM AD P+ +S L+
Sbjct: 119 YQVLLHAYVRAKAPAYGFRERMKADNIFPNSVVSTLI 155
>gb|EMT04005.1| hypothetical protein F775_26459 [Aegilops tauschii]
Length = 633
Score = 91.3 bits (225), Expect = 2e-16
Identities = 47/105 (44%), Positives = 65/105 (61%)
Frame = -3
Query: 588 GDLEKAIDIMSKASVQKEYKPKYMTILLVLNRLADKGDIPNAEKCFQIARQFGYKGRVEL 409
G+++KA I+ K S + KP+Y + L++L+ + KGDI N+EK F RQ GY GRV
Sbjct: 520 GEVDKAESILHKLSKSNKMKPQYSSYLMLLDTYSKKGDIHNSEKVFDQLRQMGYNGRVRQ 579
Query: 408 FESLLQAYVSAGVPSYGFKERMMADKCVPSRHISILLQNLEKKNK 274
++ LL AYV A P YGF+ERM AD P+ I+ LL + NK
Sbjct: 580 YQLLLNAYVHAKTPVYGFRERMKADNIFPNSVIASLLAATDPFNK 624
>gb|EMS51226.1| hypothetical protein TRIUR3_21577 [Triticum urartu]
Length = 633
Score = 91.3 bits (225), Expect = 2e-16
Identities = 47/105 (44%), Positives = 65/105 (61%)
Frame = -3
Query: 588 GDLEKAIDIMSKASVQKEYKPKYMTILLVLNRLADKGDIPNAEKCFQIARQFGYKGRVEL 409
G+++KA I+ K S + KP+Y + L++L+ + KGDI N+EK F RQ GY GRV
Sbjct: 520 GEVDKAESILHKLSKSNKMKPQYSSYLMLLDTYSKKGDIHNSEKVFDQLRQMGYNGRVRQ 579
Query: 408 FESLLQAYVSAGVPSYGFKERMMADKCVPSRHISILLQNLEKKNK 274
++ LL AYV A P YGF+ERM AD P+ I+ LL + NK
Sbjct: 580 YQLLLNAYVHAKTPVYGFRERMKADNIFPNSVIASLLAATDPFNK 624
>gb|AAF32491.1|AF091837_1 DNA-binding protein [Triticum aestivum]
Length = 612
Score = 91.3 bits (225), Expect = 2e-16
Identities = 47/105 (44%), Positives = 65/105 (61%)
Frame = -3
Query: 588 GDLEKAIDIMSKASVQKEYKPKYMTILLVLNRLADKGDIPNAEKCFQIARQFGYKGRVEL 409
G+++KA I+ K S + KP+Y + L++L+ + KGDI N+EK F RQ GY GRV
Sbjct: 500 GEVDKAESILHKLSKSNKMKPQYSSYLMLLDTYSKKGDIHNSEKVFDQLRQMGYNGRVRQ 559
Query: 408 FESLLQAYVSAGVPSYGFKERMMADKCVPSRHISILLQNLEKKNK 274
++ LL AYV A P YGF+ERM AD P+ I+ LL + NK
Sbjct: 560 YQLLLNAYVHAKTPVYGFRERMKADNIFPNSVIASLLAATDPFNK 604
>gb|EXC46728.1| hypothetical protein L484_002071 [Morus notabilis]
Length = 623
Score = 89.7 bits (221), Expect = 5e-16
Identities = 42/105 (40%), Positives = 66/105 (62%)
Frame = -3
Query: 588 GDLEKAIDIMSKASVQKEYKPKYMTILLVLNRLADKGDIPNAEKCFQIARQFGYKGRVEL 409
G++EKA ++ KA+ Q + KP Y++ + +++ A KGDI N EK F +Q GY R
Sbjct: 511 GEIEKADSVLQKATQQNQLKPLYVSYMAIMDEYAKKGDIHNTEKMFLRMKQAGYDARFRQ 570
Query: 408 FESLLQAYVSAGVPSYGFKERMMADKCVPSRHISILLQNLEKKNK 274
F++L+QAYV+A P+YG +ERM AD P+R ++ L ++ K
Sbjct: 571 FQALIQAYVNAKTPAYGIRERMKADNIFPNRALAAQLTQVDAFRK 615
>ref|XP_003567340.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Brachypodium distachyon]
Length = 612
Score = 89.4 bits (220), Expect = 7e-16
Identities = 44/105 (41%), Positives = 66/105 (62%)
Frame = -3
Query: 588 GDLEKAIDIMSKASVQKEYKPKYMTILLVLNRLADKGDIPNAEKCFQIARQFGYKGRVEL 409
G++EKA ++ K SV+ + KP+Y + L++L+ + GD+ N+EK F RQ GY GR+
Sbjct: 499 GEVEKAESLLHKLSVKNKMKPQYSSYLMLLDSYSKIGDVHNSEKVFSKLRQMGYNGRIRQ 558
Query: 408 FESLLQAYVSAGVPSYGFKERMMADKCVPSRHISILLQNLEKKNK 274
++ LL AY+ A P YGF+ERM AD P+ I+ LL + NK
Sbjct: 559 YQLLLHAYLHAKAPVYGFRERMKADNIFPNSVIASLLAATDPFNK 603