BLASTX nr result
ID: Ephedra28_contig00020796
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00020796
(498 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006386200.1| pentatricopeptide repeat-containing family p... 147 1e-33
ref|XP_004168675.1| PREDICTED: pentatricopeptide repeat-containi... 145 7e-33
ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containi... 145 7e-33
gb|EXB97347.1| hypothetical protein L484_024210 [Morus notabilis] 142 6e-32
ref|XP_006363979.1| PREDICTED: pentatricopeptide repeat-containi... 140 2e-31
ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containi... 140 2e-31
ref|XP_004235474.1| PREDICTED: pentatricopeptide repeat-containi... 139 4e-31
ref|XP_002510452.1| pentatricopeptide repeat-containing protein,... 138 7e-31
ref|XP_006400228.1| hypothetical protein EUTSA_v10012670mg [Eutr... 137 2e-30
gb|EPS64702.1| hypothetical protein M569_10080 [Genlisea aurea] 136 3e-30
ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containi... 135 6e-30
ref|XP_004238610.1| PREDICTED: pentatricopeptide repeat-containi... 135 7e-30
gb|EOY14874.1| Pentatricopeptide repeat (PPR-like) superfamily p... 134 1e-29
ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containi... 134 1e-29
ref|XP_004487456.1| PREDICTED: pentatricopeptide repeat-containi... 133 2e-29
ref|XP_002282128.1| PREDICTED: pentatricopeptide repeat-containi... 133 2e-29
gb|ESW09151.1| hypothetical protein PHAVU_009G104600g [Phaseolus... 133 3e-29
ref|XP_006832838.1| hypothetical protein AMTR_s00095p00038100 [A... 133 3e-29
ref|NP_197188.1| pentatricopeptide repeat-containing protein [Ar... 132 4e-29
ref|XP_006471568.1| PREDICTED: pentatricopeptide repeat-containi... 132 5e-29
>ref|XP_006386200.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550344175|gb|ERP63997.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 810
Score = 147 bits (371), Expect = 1e-33
Identities = 67/163 (41%), Positives = 104/163 (63%), Gaps = 4/163 (2%)
Frame = +2
Query: 17 ISDAHRIFASH----FSPNIVSWNALIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWCS 184
+ +AHR+F + P +V+WN LI GY G CD A++L +MVS G+ P+ ++W S
Sbjct: 179 VEEAHRLFDAMCEEGIEPGLVTWNILIAGYNQKGQCDVAMNLMKKMVSFGVSPDVVAWTS 238
Query: 185 IISSYAQNDRSEEAIRFYDDMMLHGVEPDCVTVASVLRACAELGSVEKGKEIHEYAAKRG 364
+IS +AQN+R+ +A+ Y +M+L GVEP+ VT+ S L ACA L + G IH A K
Sbjct: 239 MISGFAQNNRNGQALDLYKEMILAGVEPNGVTITSALSACASLKVLNTGLGIHSLAVKMS 298
Query: 365 LASETMVANALVAMYAKCDSLDTSREIFDGIARKDTVTWSAMI 493
++ +V N+L+ MY+KC L ++ +FD ++ KD TW++MI
Sbjct: 299 FVNDVLVGNSLIDMYSKCGQLGAAQLVFDLMSEKDLYTWNSMI 341
Score = 110 bits (276), Expect = 1e-22
Identities = 59/151 (39%), Positives = 92/151 (60%), Gaps = 1/151 (0%)
Frame = +2
Query: 44 SHFSPNIVSWNALIGGYGHNGMCDKALDLFNEMVSLG-IKPNAISWCSIISSYAQNDRSE 220
S PN+V+WN +I GY +G D+A+DLF+ M G IK + SW S+I+ + Q + +
Sbjct: 363 SQVQPNVVTWNTMISGYIQSGDEDQAMDLFHRMEKEGEIKRDNASWNSLIAGFMQIRKKD 422
Query: 221 EAIRFYDDMMLHGVEPDCVTVASVLRACAELGSVEKGKEIHEYAAKRGLASETMVANALV 400
+A+ + M + P+ VT+ S+L ACA L +++K KEIH +R L S ++N+L+
Sbjct: 423 KALGIFRQMQSFCISPNPVTILSMLPACASLVALKKVKEIHGCVLRRNLVSVLSISNSLI 482
Query: 401 AMYAKCDSLDTSREIFDGIARKDTVTWSAMI 493
YAK ++ SR IFD I KD +T ++MI
Sbjct: 483 DTYAKSGKIEYSRAIFDRIPSKDFITVNSMI 513
Score = 73.9 bits (180), Expect = 2e-11
Identities = 38/139 (27%), Positives = 70/139 (50%)
Frame = +2
Query: 80 LIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWCSIISSYAQNDRSEEAIRFYDDMMLHG 259
L+ Y G A +F+EM + +W ++I + + R +E + Y MM
Sbjct: 37 LVSMYAKCGYLRDARKVFDEMSERSL----FTWSAMIGACCREKRWKEVVELYYMMMKDN 92
Query: 260 VEPDCVTVASVLRACAELGSVEKGKEIHEYAAKRGLASETMVANALVAMYAKCDSLDTSR 439
V PD + +L+A V+ G+ +H + + G+ S V N+++A+Y+KC L +R
Sbjct: 93 VLPDGFLLPKILQAVGNCRDVKTGELLHSFVVRCGMGSSPRVNNSILAVYSKCGKLSLAR 152
Query: 440 EIFDGIARKDTVTWSAMIA 496
F+ + +D V W+AM++
Sbjct: 153 RFFESMDERDIVAWNAMMS 171
>ref|XP_004168675.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like, partial [Cucumis sativus]
Length = 1090
Score = 145 bits (365), Expect = 7e-33
Identities = 65/148 (43%), Positives = 99/148 (66%)
Frame = +2
Query: 50 FSPNIVSWNALIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWCSIISSYAQNDRSEEAI 229
F P +V++N +I Y G CD +DL +M S+G+ P+ +W S+IS ++Q+ R +A+
Sbjct: 277 FKPGLVTYNIMIASYSQLGDCDLVIDLKKKMESVGLAPDVYTWTSMISGFSQSSRISQAL 336
Query: 230 RFYDDMMLHGVEPDCVTVASVLRACAELGSVEKGKEIHEYAAKRGLASETMVANALVAMY 409
F+ M+L GVEP+ +T+AS ACA L S++ G EIH +A K G+A ET+V N+L+ MY
Sbjct: 337 DFFKKMILAGVEPNTITIASATSACASLKSLQNGLEIHCFAIKMGIARETLVGNSLIDMY 396
Query: 410 AKCDSLDTSREIFDGIARKDTVTWSAMI 493
+KC L+ +R +FD I KD TW++MI
Sbjct: 397 SKCGKLEAARHVFDTILEKDVYTWNSMI 424
Score = 119 bits (297), Expect = 6e-25
Identities = 64/156 (41%), Positives = 94/156 (60%), Gaps = 1/156 (0%)
Frame = +2
Query: 32 RIFASHFSPNIVSWNALIGGYGHNGMCDKALDLFNEMVSLG-IKPNAISWCSIISSYAQN 208
R+ S PN+V+WNA+I G NG D+A+DLF M G +K N SW S+I+ Y Q
Sbjct: 442 RLRESTVMPNVVTWNAMISGCIQNGDEDQAMDLFQIMEKDGGVKRNTASWNSLIAGYHQL 501
Query: 209 DRSEEAIRFYDDMMLHGVEPDCVTVASVLRACAELGSVEKGKEIHEYAAKRGLASETMVA 388
+A+ + M P+ VT+ S+L ACA + + +K KEIH +R L SE VA
Sbjct: 502 GEKNKALAIFRQMQSLNFSPNSVTILSILPACANVMAEKKIKEIHGCVLRRNLESELAVA 561
Query: 389 NALVAMYAKCDSLDTSREIFDGIARKDTVTWSAMIA 496
N+LV YAK ++ SR +F+G++ KD +TW+++IA
Sbjct: 562 NSLVDTYAKSGNIKYSRTVFNGMSSKDIITWNSIIA 597
Score = 72.4 bits (176), Expect = 6e-11
Identities = 39/139 (28%), Positives = 69/139 (49%)
Frame = +2
Query: 80 LIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWCSIISSYAQNDRSEEAIRFYDDMMLHG 259
L+ Y G A +F+ M + N +W ++I +Y++ R +E + + MM G
Sbjct: 120 LVSMYAKCGCLKDARKVFDGMQ----ERNLYTWSAMIGAYSREQRWKEVVELFFLMMGDG 175
Query: 260 VEPDCVTVASVLRACAELGSVEKGKEIHEYAAKRGLASETMVANALVAMYAKCDSLDTSR 439
V PD +L+AC +E K IH + GL+ ++N+++ + KC L +R
Sbjct: 176 VLPDAFLFPKILQACGNCEDLETVKLIHSLVIRCGLSCYMRLSNSILTAFVKCGKLSLAR 235
Query: 440 EIFDGIARKDTVTWSAMIA 496
+ F + +D V+W+ MIA
Sbjct: 236 KFFGNMDERDGVSWNVMIA 254
Score = 66.6 bits (161), Expect = 3e-09
Identities = 37/104 (35%), Positives = 56/104 (53%), Gaps = 2/104 (1%)
Frame = +2
Query: 188 ISSYAQNDRSEEAIRFYDDMMLHGVEPDCVTVASVLRACAELGSVEKGKEIHEYAAKRGL 367
+S N EAI D + G + T ++L+ C ++GS+E G+E+H + GL
Sbjct: 52 LSYLCSNGLLREAITAIDSISKRGSKLSTNTYINLLQTCIDVGSIELGRELH---VRMGL 108
Query: 368 ASET--MVANALVAMYAKCDSLDTSREIFDGIARKDTVTWSAMI 493
V LV+MYAKC L +R++FDG+ ++ TWSAMI
Sbjct: 109 VHRVNPFVETKLVSMYAKCGCLKDARKVFDGMQERNLYTWSAMI 152
>ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Cucumis sativus]
Length = 1463
Score = 145 bits (365), Expect = 7e-33
Identities = 65/148 (43%), Positives = 99/148 (66%)
Frame = +2
Query: 50 FSPNIVSWNALIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWCSIISSYAQNDRSEEAI 229
F P +V++N +I Y G CD +DL +M S+G+ P+ +W S+IS ++Q+ R +A+
Sbjct: 277 FKPGLVTYNIMIASYSQLGDCDLVIDLKKKMESVGLAPDVYTWTSMISGFSQSSRISQAL 336
Query: 230 RFYDDMMLHGVEPDCVTVASVLRACAELGSVEKGKEIHEYAAKRGLASETMVANALVAMY 409
F+ M+L GVEP+ +T+AS ACA L S++ G EIH +A K G+A ET+V N+L+ MY
Sbjct: 337 DFFKKMILAGVEPNTITIASATSACASLKSLQNGLEIHCFAIKMGIARETLVGNSLIDMY 396
Query: 410 AKCDSLDTSREIFDGIARKDTVTWSAMI 493
+KC L+ +R +FD I KD TW++MI
Sbjct: 397 SKCGKLEAARHVFDTILEKDVYTWNSMI 424
Score = 119 bits (297), Expect = 6e-25
Identities = 64/156 (41%), Positives = 94/156 (60%), Gaps = 1/156 (0%)
Frame = +2
Query: 32 RIFASHFSPNIVSWNALIGGYGHNGMCDKALDLFNEMVSLG-IKPNAISWCSIISSYAQN 208
R+ S PN+V+WNA+I G NG D+A+DLF M G +K N SW S+I+ Y Q
Sbjct: 442 RLRESTVMPNVVTWNAMISGCIQNGDEDQAMDLFQIMEKDGGVKRNTASWNSLIAGYHQL 501
Query: 209 DRSEEAIRFYDDMMLHGVEPDCVTVASVLRACAELGSVEKGKEIHEYAAKRGLASETMVA 388
+A+ + M P+ VT+ S+L ACA + + +K KEIH +R L SE VA
Sbjct: 502 GEKNKALAIFRQMQSLNFSPNSVTILSILPACANVMAEKKIKEIHGCVLRRNLESELAVA 561
Query: 389 NALVAMYAKCDSLDTSREIFDGIARKDTVTWSAMIA 496
N+LV YAK ++ SR +F+G++ KD +TW+++IA
Sbjct: 562 NSLVDTYAKSGNIKYSRTVFNGMSSKDIITWNSIIA 597
Score = 72.4 bits (176), Expect = 6e-11
Identities = 39/139 (28%), Positives = 69/139 (49%)
Frame = +2
Query: 80 LIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWCSIISSYAQNDRSEEAIRFYDDMMLHG 259
L+ Y G A +F+ M + N +W ++I +Y++ R +E + + MM G
Sbjct: 120 LVSMYAKCGCLKDARKVFDGMQ----ERNLYTWSAMIGAYSREQRWKEVVELFFLMMGDG 175
Query: 260 VEPDCVTVASVLRACAELGSVEKGKEIHEYAAKRGLASETMVANALVAMYAKCDSLDTSR 439
V PD +L+AC +E K IH + GL+ ++N+++ + KC L +R
Sbjct: 176 VLPDAFLFPKILQACGNCEDLETVKLIHSLVIRCGLSCYMRLSNSILTAFVKCGKLSLAR 235
Query: 440 EIFDGIARKDTVTWSAMIA 496
+ F + +D V+W+ MIA
Sbjct: 236 KFFGNMDERDGVSWNVMIA 254
Score = 66.6 bits (161), Expect = 3e-09
Identities = 37/104 (35%), Positives = 56/104 (53%), Gaps = 2/104 (1%)
Frame = +2
Query: 188 ISSYAQNDRSEEAIRFYDDMMLHGVEPDCVTVASVLRACAELGSVEKGKEIHEYAAKRGL 367
+S N EAI D + G + T ++L+ C ++GS+E G+E+H + GL
Sbjct: 52 LSYLCSNGLLREAITAIDSISKRGSKLSTNTYINLLQTCIDVGSIELGRELH---VRMGL 108
Query: 368 ASET--MVANALVAMYAKCDSLDTSREIFDGIARKDTVTWSAMI 493
V LV+MYAKC L +R++FDG+ ++ TWSAMI
Sbjct: 109 VHRVNPFVETKLVSMYAKCGCLKDARKVFDGMQERNLYTWSAMI 152
>gb|EXB97347.1| hypothetical protein L484_024210 [Morus notabilis]
Length = 880
Score = 142 bits (357), Expect = 6e-32
Identities = 63/146 (43%), Positives = 97/146 (66%)
Frame = +2
Query: 56 PNIVSWNALIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWCSIISSYAQNDRSEEAIRF 235
P +V+WN +I Y G D A+ L +M SLGI P+ +W S+IS +AQN+R +A+
Sbjct: 271 PGLVTWNIMIASYNQLGQTDVAMGLMKKMESLGIVPDVFTWTSLISGFAQNNRRNQALDL 330
Query: 236 YDDMMLHGVEPDCVTVASVLRACAELGSVEKGKEIHEYAAKRGLASETMVANALVAMYAK 415
+ +M+L GV+P+ VT+ S + ACA L S+ KG EIH ++ K GL + +V N+L+ MY+K
Sbjct: 331 FKEMLLAGVKPNAVTITSAVSACASLKSLGKGLEIHAFSIKIGLIEDVLVGNSLIDMYSK 390
Query: 416 CDSLDTSREIFDGIARKDTVTWSAMI 493
C L+ ++E+FD I KD TW+++I
Sbjct: 391 CGELEAAQEVFDMIIEKDVFTWNSLI 416
Score = 114 bits (285), Expect = 1e-23
Identities = 61/152 (40%), Positives = 92/152 (60%), Gaps = 1/152 (0%)
Frame = +2
Query: 44 SHFSPNIVSWNALIGGYGHNGMCDKALDLFNEMVSLG-IKPNAISWCSIISSYAQNDRSE 220
S +PN+++WN +I GY NG D+A+DLF M G +K N SW S+++ Y +
Sbjct: 438 SDVAPNVITWNVMISGYIQNGDEDEAMDLFRRMEKDGKVKRNTASWNSLVAGYLHVGEKD 497
Query: 221 EAIRFYDDMMLHGVEPDCVTVASVLRACAELGSVEKGKEIHEYAAKRGLASETMVANALV 400
+A+ + M + V P+ VT+ SVL CA L + +K +EIH +R L SE VAN+L+
Sbjct: 498 KALGIFRQMQSYCVIPNLVTMLSVLPTCANLLAEKKVREIHCCILRRVLDSELPVANSLL 557
Query: 401 AMYAKCDSLDTSREIFDGIARKDTVTWSAMIA 496
YAK ++ SR IFD + KD +TW+++IA
Sbjct: 558 DTYAKAGNMTYSRTIFDRMLSKDIITWNSIIA 589
Score = 73.9 bits (180), Expect = 2e-11
Identities = 38/139 (27%), Positives = 71/139 (51%)
Frame = +2
Query: 80 LIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWCSIISSYAQNDRSEEAIRFYDDMMLHG 259
L+ Y G A +F+ M + N +W ++I + ++ R +E ++ + MM G
Sbjct: 112 LVSMYAKCGCLHDARRVFDGMR----ERNLFTWSAMIGACSREQRWKEVLKLFYLMMGDG 167
Query: 260 VEPDCVTVASVLRACAELGSVEKGKEIHEYAAKRGLASETMVANALVAMYAKCDSLDTSR 439
+ PD + +L AC + K IH + G V N+++A+YAKC L+ +R
Sbjct: 168 ILPDKFLLPKILEACGNCADFKTAKVIHSMVVRCGFCGSIRVINSILAVYAKCGKLNWAR 227
Query: 440 EIFDGIARKDTVTWSAMIA 496
F+ + ++D V+W+A+I+
Sbjct: 228 RFFESMDKRDLVSWNAIIS 246
Score = 58.9 bits (141), Expect = 7e-07
Identities = 37/112 (33%), Positives = 60/112 (53%), Gaps = 4/112 (3%)
Frame = +2
Query: 170 ISWCSIISSYAQNDRSEEAIRFYDDMMLHG--VEPDCVTVASVLRACAELGSVEKGKEIH 343
IS+ S + ++ R +A+ D + G V+ T ++L++C + S+E G+++H
Sbjct: 35 ISFDSHLDKLCRDGRLSDAVAALDAIAERGSKVKLKPRTYMNLLQSCIDTNSIELGRKLH 94
Query: 344 EYAAKRGLAS--ETMVANALVAMYAKCDSLDTSREIFDGIARKDTVTWSAMI 493
A GL V LV+MYAKC L +R +FDG+ ++ TWSAMI
Sbjct: 95 --ARMMGLVQYVNPFVETKLVSMYAKCGCLHDARRVFDGMRERNLFTWSAMI 144
>ref|XP_006363979.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like isoform X1 [Solanum tuberosum]
gi|565396768|ref|XP_006363980.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g16860-like isoform X2 [Solanum tuberosum]
Length = 843
Score = 140 bits (352), Expect = 2e-31
Identities = 73/173 (42%), Positives = 102/173 (58%), Gaps = 9/173 (5%)
Frame = +2
Query: 2 AKCRMISDAHRIFASHFSPNIVSWNALIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWC 181
AKC+ + DA+++F ++VSWNAL+ GY G D+AL LF M I N ++W
Sbjct: 268 AKCKRLDDANKVFELMEVKDVVSWNALVTGYSQIGRFDEALGLFERMREEEIDLNVVTWS 327
Query: 182 SIISSYAQNDRSEEAIRFYDDMMLHGVEPDCVTVASVLRACAELGSVEKGKEIHEYAAKR 361
++IS YAQ D EA+ + M L G EP+ +T+ SVL CA +G++ +GKE H YA KR
Sbjct: 328 AVISGYAQRDLGYEALNIFKGMRLSGAEPNVITLVSVLSGCAAIGALRQGKETHCYAIKR 387
Query: 362 GLASE-------TMVANALVAMYAKCDSLDTSREIFDGIARKD--TVTWSAMI 493
+ E MV NAL+ MYAKC + + +FD I R+D VTW+ MI
Sbjct: 388 MFSLEGSNTEEDLMVTNALIDMYAKCKEMKIAHAMFDDIDRRDRNVVTWTVMI 440
Score = 106 bits (265), Expect = 3e-21
Identities = 57/156 (36%), Positives = 93/156 (59%), Gaps = 3/156 (1%)
Frame = +2
Query: 35 IFASHFSPNIVSWNALIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWCSIISSYAQNDR 214
I AS N+ N +I YG G+ A +F+E V + + ISW SI+++Y Q D
Sbjct: 141 ILASGLDSNVFVCNGVIAMYGKCGLLGHARQVFDETV-VRETADVISWNSIVAAYVQKDE 199
Query: 215 SEEAIRFYDDMM-LHGVE--PDCVTVASVLRACAELGSVEKGKEIHEYAAKRGLASETMV 385
++ + +D M+ L+ E PD V++ +VL AC LG+ ++GK++ YA +R L + V
Sbjct: 200 DKKVLELFDSMVSLNSFELRPDAVSLVNVLPACGSLGAWKRGKQLQGYAIRRCLHEDVFV 259
Query: 386 ANALVAMYAKCDSLDTSREIFDGIARKDTVTWSAMI 493
NA+V MYAKC LD + ++F+ + KD V+W+A++
Sbjct: 260 GNAIVDMYAKCKRLDDANKVFELMEVKDVVSWNALV 295
Score = 58.9 bits (141), Expect = 7e-07
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Frame = +2
Query: 176 WCSIISSYAQNDRSEEAIRFYDDMMLHGVEPDCVTVASVLRACAELGSVEKGKEIHEYAA 355
W ++I E A+ + +M+ D T VL+AC EL + G+ +H
Sbjct: 83 WNNLIKRSVILRHHESALVLFREMLRLDWNADGYTYPYVLKACGELRFLLCGESVHSLIL 142
Query: 356 KRGLASETMVANALVAMYAKCDSLDTSREIFDGIARKDT---VTWSAMIA 496
GL S V N ++AMY KC L +R++FD ++T ++W++++A
Sbjct: 143 ASGLDSNVFVCNGVIAMYGKCGLLGHARQVFDETVVRETADVISWNSIVA 192
Score = 56.6 bits (135), Expect = 3e-06
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 3/152 (1%)
Frame = +2
Query: 50 FSPNIVSW-NALIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWCSIISSYAQNDRSEEA 226
+ P IV N LI Y +G D A +F+ M + N +SW S+++ Y + R EEA
Sbjct: 501 YEPTIVFVANCLIDMYAKSGDVDAARLVFDNMS----QRNTVSWTSLMTGYGMHGRGEEA 556
Query: 227 IRFYDDMMLHGVEPDCVTVASVLRACAELGSVEKGKE-IHEYAAKRGLASETMVANALVA 403
++ ++ M G+ D VT VL AC+ G V+KG + G+ ++
Sbjct: 557 LQVFNVMRGEGLPIDGVTFLVVLYACSHSGMVDKGMNYFNHMKGDFGVVPGAEHYACMID 616
Query: 404 MYAKCDSLDTSREIFDGIARKDT-VTWSAMIA 496
+ + LD + ++ + + + T V W A+++
Sbjct: 617 ILGRAGRLDEAMKLIERMPMEPTSVVWVALLS 648
>ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Vitis vinifera]
Length = 1545
Score = 140 bits (352), Expect = 2e-31
Identities = 64/163 (39%), Positives = 102/163 (62%), Gaps = 4/163 (2%)
Frame = +2
Query: 17 ISDAHRIFASH----FSPNIVSWNALIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWCS 184
+ +H++F P +V+WN LI Y +G CD A++L +M S I P+ +W S
Sbjct: 267 LEKSHQLFEKMQEEGIEPGLVTWNILINSYSQSGKCDDAMELMKKMESFRIVPDVFTWTS 326
Query: 185 IISSYAQNDRSEEAIRFYDDMMLHGVEPDCVTVASVLRACAELGSVEKGKEIHEYAAKRG 364
+IS +AQN+R +A+ + +M+L G+EP+ VTV S + ACA L +++KG E+H A K G
Sbjct: 327 MISGFAQNNRRSQALELFREMLLAGIEPNGVTVTSGISACASLKALKKGMELHSVAVKIG 386
Query: 365 LASETMVANALVAMYAKCDSLDTSREIFDGIARKDTVTWSAMI 493
+ +V N+L+ MY+K L+ +R +FD I +KD TW++MI
Sbjct: 387 CVEDLLVGNSLIDMYSKSGELEDARRVFDMILKKDVYTWNSMI 429
Score = 124 bits (310), Expect = 2e-26
Identities = 64/156 (41%), Positives = 96/156 (61%), Gaps = 1/156 (0%)
Frame = +2
Query: 32 RIFASHFSPNIVSWNALIGGYGHNGMCDKALDLFNEMVSLG-IKPNAISWCSIISSYAQN 208
++ S PN+V+WNA+I GY NG D+A+DLF+ M G IK + SW S+I+ Y QN
Sbjct: 447 KMHESDVPPNVVTWNAMISGYIQNGDEDQAMDLFHRMEKDGLIKRDTASWNSLIAGYLQN 506
Query: 209 DRSEEAIRFYDDMMLHGVEPDCVTVASVLRACAELGSVEKGKEIHEYAAKRGLASETMVA 388
+A+ + M + P+ VT+ S+L ACA L + +K KEIH +R L SE VA
Sbjct: 507 GHKNKALGIFRQMQSFCIRPNSVTMLSILPACANLVAAKKVKEIHGCILRRNLGSELSVA 566
Query: 389 NALVAMYAKCDSLDTSREIFDGIARKDTVTWSAMIA 496
N L+ YAK ++ ++ IF GI+ KD ++W+++IA
Sbjct: 567 NCLIDTYAKSGNIVYAQTIFQGISSKDIISWNSLIA 602
Score = 80.9 bits (198), Expect = 2e-13
Identities = 41/138 (29%), Positives = 73/138 (52%)
Frame = +2
Query: 80 LIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWCSIISSYAQNDRSEEAIRFYDDMMLHG 259
L+ Y G +A +F EM + N +W ++I +Y++ E ++ + MM G
Sbjct: 125 LVSMYAKCGSLGEARKVFGEMR----ERNLYAWSAMIGAYSREQMWREVVQHFFFMMEDG 180
Query: 260 VEPDCVTVASVLRACAELGSVEKGKEIHEYAAKRGLASETMVANALVAMYAKCDSLDTSR 439
+ PD + +L+AC G E GK IH + G+ V+N+++A+YAKC L +R
Sbjct: 181 IVPDEFLLPKILQACGNCGDAETGKLIHSLVIRCGMNFNIRVSNSILAVYAKCGRLSCAR 240
Query: 440 EIFDGIARKDTVTWSAMI 493
F+ + +D V+W+++I
Sbjct: 241 RFFENMDYRDRVSWNSII 258
Score = 60.1 bits (144), Expect = 3e-07
Identities = 31/83 (37%), Positives = 50/83 (60%)
Frame = +2
Query: 2 AKCRMISDAHRIFASHFSPNIVSWNALIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWC 181
AK I A IF S +I+SWN+LI GY +G D ALDLF++M +G+KP+ ++
Sbjct: 574 AKSGNIVYAQTIFQGISSKDIISWNSLIAGYVLHGCSDSALDLFDQMTKMGVKPSRGTFL 633
Query: 182 SIISSYAQNDRSEEAIRFYDDMM 250
SII +++ + ++ + + MM
Sbjct: 634 SIIYAFSLSGMVDKGKQVFSSMM 656
Score = 57.4 bits (137), Expect = 2e-06
Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Frame = +2
Query: 188 ISSYAQNDRSEEAIRFYDDMMLHGVEPDCVTVASVLRACAELGSVEKGKEIHEYAAKRGL 367
++ +N R +AI D + G T +L++C + GS E G+++H A+ GL
Sbjct: 57 LNHLCKNGRLADAIACLDAIAQGGSNVKPNTYMQLLQSCIDQGSAELGRKLH---ARIGL 113
Query: 368 ASET--MVANALVAMYAKCDSLDTSREIFDGIARKDTVTWSAMI 493
E V LV+MYAKC SL +R++F + ++ WSAMI
Sbjct: 114 LEEMNPFVETKLVSMYAKCGSLGEARKVFGEMRERNLYAWSAMI 157
>ref|XP_004235474.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Solanum lycopersicum]
Length = 843
Score = 139 bits (350), Expect = 4e-31
Identities = 72/173 (41%), Positives = 105/173 (60%), Gaps = 9/173 (5%)
Frame = +2
Query: 2 AKCRMISDAHRIFASHFSPNIVSWNALIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWC 181
AKC+ + DA+++F ++VSWNAL+ GY G D+AL LF M I N ++W
Sbjct: 268 AKCKRLDDANKVFELMEVKDVVSWNALVTGYSQIGRFDEALGLFERMREEKIDLNVVTWS 327
Query: 182 SIISSYAQNDRSEEAIRFYDDMMLHGVEPDCVTVASVLRACAELGSVEKGKEIHEYAAKR 361
++IS YAQ D EA+ + +M L G EP+ +T+ SVL CA +G++ +GKE H YA K+
Sbjct: 328 AVISGYAQRDLGYEALNIFKEMRLSGAEPNVITLVSVLSGCAAIGALRQGKETHCYAIKQ 387
Query: 362 GLASE-------TMVANALVAMYAKCDSLDTSREIFDGIAR--KDTVTWSAMI 493
L+ E MV NAL+ MYAKC + ++ +FD I R ++ VTW+ MI
Sbjct: 388 ILSLEGSNTEEDLMVTNALIDMYAKCKEMKIAQAMFDDIDRRGRNVVTWTVMI 440
Score = 105 bits (261), Expect = 8e-21
Identities = 56/156 (35%), Positives = 93/156 (59%), Gaps = 3/156 (1%)
Frame = +2
Query: 35 IFASHFSPNIVSWNALIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWCSIISSYAQNDR 214
I +S N+ N LI YG G+ A +F++ V + + ISW SI+++Y Q D
Sbjct: 141 ILSSGLDSNVFVCNGLIAMYGKCGLLGHARQVFDKTVER-VTADVISWNSIVAAYVQKDE 199
Query: 215 SEEAIRFYDDMM-LHGVE--PDCVTVASVLRACAELGSVEKGKEIHEYAAKRGLASETMV 385
++ + +D M+ L+ E PD V++ +VL AC LG+ ++GK++ YA +R L + V
Sbjct: 200 DKKVLELFDLMVALNSFELRPDAVSLVNVLPACGSLGAWKRGKQLQGYAIRRCLHEDIFV 259
Query: 386 ANALVAMYAKCDSLDTSREIFDGIARKDTVTWSAMI 493
NA+V MYAKC LD + ++F+ + KD V+W+A++
Sbjct: 260 GNAIVDMYAKCKRLDDANKVFELMEVKDVVSWNALV 295
Score = 82.8 bits (203), Expect = 4e-14
Identities = 46/165 (27%), Positives = 90/165 (54%), Gaps = 3/165 (1%)
Frame = +2
Query: 8 CRMISDAHRIFASHFSPNIVSWNALIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWCSI 187
C I + S+ +++ NALI Y A +F+++ G N ++W +
Sbjct: 382 CYAIKQILSLEGSNTEEDLMVTNALIDMYAKCKEMKIAQAMFDDIDRRG--RNVVTWTVM 439
Query: 188 ISSYAQNDRSEEAIRFYDDMML--HGVEPDCVTVASVLRACAELGSVEKGKEIHEYAAKR 361
I YAQ+ + +A+ + M+ + V P+ T++ L ACA L S+ G++IH Y ++
Sbjct: 440 IGGYAQHGDANDALELFSAMLKDEYSVIPNAYTISCALVACARLSSLRIGRQIHAYVLRQ 499
Query: 362 GLA-SETMVANALVAMYAKCDSLDTSREIFDGIARKDTVTWSAMI 493
G ++ VAN L+ MY+K +D +R +FD +++++ V+W++++
Sbjct: 500 GCEPTKVFVANCLIDMYSKSGDVDAARLVFDNMSQRNAVSWTSLM 544
Score = 64.3 bits (155), Expect = 2e-08
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Frame = +2
Query: 176 WCSIISSYAQNDRSEEAIRFYDDMMLHGVEPDCVTVASVLRACAELGSVEKGKEIHEYAA 355
W ++I E A+ + +M+ PD T +L+AC EL + G+ +H
Sbjct: 83 WNNLIKRCVLLRHHESALVLFREMLRLDWNPDGYTYPYILKACGELRFLLFGESVHSLIL 142
Query: 356 KRGLASETMVANALVAMYAKCDSLDTSREIFDGIARK---DTVTWSAMIA 496
GL S V N L+AMY KC L +R++FD + D ++W++++A
Sbjct: 143 SSGLDSNVFVCNGLIAMYGKCGLLGHARQVFDKTVERVTADVISWNSIVA 192
Score = 56.2 bits (134), Expect = 4e-06
Identities = 38/143 (26%), Positives = 70/143 (48%), Gaps = 2/143 (1%)
Frame = +2
Query: 74 NALIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWCSIISSYAQNDRSEEAIRFYDDMML 253
N LI Y +G D A +F+ M + NA+SW S+++ Y + R EEA++ ++ M
Sbjct: 510 NCLIDMYSKSGDVDAARLVFDNMS----QRNAVSWTSLMTGYGMHGRGEEALQVFNVMRG 565
Query: 254 HGVEPDCVTVASVLRACAELGSVEKGKE-IHEYAAKRGLASETMVANALVAMYAKCDSLD 430
G+ D VT VL AC+ G V++G + G+ ++ + + LD
Sbjct: 566 EGLPIDGVTFLVVLYACSHSGMVDEGMNYFNHMQGDFGVVPGAEHYACMIDILGRAGRLD 625
Query: 431 TSREIFDGIARKDT-VTWSAMIA 496
+ ++ + + + T V W A+++
Sbjct: 626 EAMKLIERMPMEPTSVVWVALLS 648
>ref|XP_002510452.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223551153|gb|EEF52639.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1218
Score = 138 bits (348), Expect = 7e-31
Identities = 66/163 (40%), Positives = 102/163 (62%), Gaps = 4/163 (2%)
Frame = +2
Query: 17 ISDAHRIFASH----FSPNIVSWNALIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWCS 184
I +A R+F + P +VSWN LI GY G D A++L +M LG P+ ++W S
Sbjct: 256 IEEAQRLFDAMREEGIEPGLVSWNILIAGYNQLGYFDIAMELMKKMEVLGTSPDVVTWTS 315
Query: 185 IISSYAQNDRSEEAIRFYDDMMLHGVEPDCVTVASVLRACAELGSVEKGKEIHEYAAKRG 364
+IS AQND++ +A+ ++DM+L VEP+ VT++S + ACA L + +G EIH A K G
Sbjct: 316 MISGLAQNDKASKALHLFNDMILARVEPNGVTISSAVSACASLKVLNEGLEIHALAVKLG 375
Query: 365 LASETMVANALVAMYAKCDSLDTSREIFDGIARKDTVTWSAMI 493
+ +V N+L+ MY+KC L+ + ++FD + KD TW++MI
Sbjct: 376 FVEDVLVGNSLIDMYSKCGKLENAWKVFDMMPEKDVYTWNSMI 418
Score = 113 bits (282), Expect = 3e-23
Identities = 64/162 (39%), Positives = 93/162 (57%), Gaps = 5/162 (3%)
Frame = +2
Query: 26 AHRIFA----SHFSPNIVSWNALIGGYGHNGMCDKALDLFNEMVSLG-IKPNAISWCSII 190
AH +F S PN ++WN +I GY HNG D+A+DLF M G IK + SW S+I
Sbjct: 430 AHMLFMKMQKSETQPNAITWNNMIWGYIHNGDEDQAMDLFRRMEEDGKIKRDTASWNSLI 489
Query: 191 SSYAQNDRSEEAIRFYDDMMLHGVEPDCVTVASVLRACAELGSVEKGKEIHEYAAKRGLA 370
S Y Q + ++A+ + M + + VT+ SVL ACA L +++ KEIH +R L
Sbjct: 490 SGYLQIGQKDKALSIFRQMQSFSININSVTILSVLPACANLIALKMVKEIHGCVIRRNLD 549
Query: 371 SETMVANALVAMYAKCDSLDTSREIFDGIARKDTVTWSAMIA 496
S + N+L+ YAK ++ SR IFD KD +TW+++IA
Sbjct: 550 SLLPITNSLIDTYAKSGNIGYSRTIFDRALFKDFITWNSLIA 591
Score = 75.5 bits (184), Expect = 7e-12
Identities = 38/139 (27%), Positives = 71/139 (51%)
Frame = +2
Query: 80 LIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWCSIISSYAQNDRSEEAIRFYDDMMLHG 259
L+ Y G A LF EM + N +W ++I ++++ R +E + + MM
Sbjct: 114 LVSMYAKCGSLSDARKLFGEMR----EKNLYTWSAMIGAFSREHRWKEVVELFYMMMEEN 169
Query: 260 VEPDCVTVASVLRACAELGSVEKGKEIHEYAAKRGLASETMVANALVAMYAKCDSLDTSR 439
PD + +L+AC ++ G+ +H A K G+ V N+++A+YAKC L +
Sbjct: 170 CLPDAFLLPKILQACGNSRDIKSGEMVHSLAIKCGVDGYPFVNNSILAVYAKCGKLSLAS 229
Query: 440 EIFDGIARKDTVTWSAMIA 496
+ F+ + + +T W+A+I+
Sbjct: 230 KCFEMMDKSETAAWNALIS 248
Score = 56.2 bits (134), Expect = 4e-06
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 2/106 (1%)
Frame = +2
Query: 182 SIISSYAQNDRSEEAIRFYDDMMLHGVEPDCVTVASVLRACAELGSVEKGKEIHEYAAKR 361
S ++ + R EA+ + + HG + T S+L++C + SV G+++H A
Sbjct: 44 SHLNYLCKKGRLNEAVSALELIAQHGSKVSPKTFISLLQSCIDCNSVTLGRKVH---AHF 100
Query: 362 GLASE--TMVANALVAMYAKCDSLDTSREIFDGIARKDTVTWSAMI 493
L E + LV+MYAKC SL +R++F + K+ TWSAMI
Sbjct: 101 HLVQEKNPFLETKLVSMYAKCGSLSDARKLFGEMREKNLYTWSAMI 146
>ref|XP_006400228.1| hypothetical protein EUTSA_v10012670mg [Eutrema salsugineum]
gi|557101318|gb|ESQ41681.1| hypothetical protein
EUTSA_v10012670mg [Eutrema salsugineum]
Length = 853
Score = 137 bits (344), Expect = 2e-30
Identities = 71/174 (40%), Positives = 106/174 (60%), Gaps = 9/174 (5%)
Frame = +2
Query: 2 AKCRMISDAHRIFASHFSPNIVSWNALIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWC 181
AKC M+ +A+R+F++ S ++VSWNA++ GY G D A+ LF +M IK + ++W
Sbjct: 278 AKCGMMDEANRVFSNMTSKDVVSWNAMVAGYSQIGRFDDAVKLFEKMQEEKIKMDVVTWS 337
Query: 182 SIISSYAQNDRSEEAIRFYDDMMLHGVEPDCVTVASVLRACAELGSVEKGKEIHEYA--- 352
+ IS YAQ EA+R M+ ++P+ VT+ SVL CA +G++ GKEIH YA
Sbjct: 338 AAISGYAQRGLGYEALRVCRQMLSSEIKPNEVTLISVLSGCASVGALLHGKEIHCYAIKH 397
Query: 353 ----AKRGLASETMVANALVAMYAKCDSLDTSREIFDGIA--RKDTVTWSAMIA 496
K L + MV N L+ MYAKC +DT+R +FD ++ +D VTW+ MI+
Sbjct: 398 PIDLCKNVLGDDNMVINQLIDMYAKCKKVDTARAMFDSLSHMERDVVTWTVMIS 451
Score = 96.3 bits (238), Expect = 4e-18
Identities = 51/150 (34%), Positives = 81/150 (54%), Gaps = 1/150 (0%)
Frame = +2
Query: 50 FSPNIVSWNALIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWCSIISSYAQNDRSEEAI 229
F+ N+ NAL+ Y G A +F+EM +G+ + +SW SII SYA+ + + A+
Sbjct: 158 FNSNVFVGNALVAMYSRFGSLADARKVFDEMSVIGVW-DVVSWNSIIESYAKLGKPKMAL 216
Query: 230 RFYDDMMLH-GVEPDCVTVASVLRACAELGSVEKGKEIHEYAAKRGLASETMVANALVAM 406
+ M G PD +T +V+ CA +G+ GK++H + + V N LV M
Sbjct: 217 EMFSRMTNEFGFMPDDITFVNVIPPCASIGAHSFGKQMHGFVITSEIIRNMFVGNCLVDM 276
Query: 407 YAKCDSLDTSREIFDGIARKDTVTWSAMIA 496
YAKC +D + +F + KD V+W+AM+A
Sbjct: 277 YAKCGMMDEANRVFSNMTSKDVVSWNAMVA 306
Score = 78.2 bits (191), Expect = 1e-12
Identities = 43/143 (30%), Positives = 77/143 (53%), Gaps = 3/143 (2%)
Frame = +2
Query: 74 NALIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWCSIISSYAQNDRSEEAIRFYDDMML 253
N LI Y D A +F+ + + + + ++W +IS Y+Q+ + EA++ + +M
Sbjct: 414 NQLIDMYAKCKKVDTARAMFDSLSHM--ERDVVTWTVMISGYSQHGDANEALKLFSEMFE 471
Query: 254 HGVEP--DCVTVASVLRACAELGSVEKGKEIHEYAAKRGL-ASETMVANALVAMYAKCDS 424
P + T++ L ACA L ++ GK+IH YA + A V+N L+ MYAKC
Sbjct: 472 QDSRPRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAIPLFVSNCLIDMYAKCGD 531
Query: 425 LDTSREIFDGIARKDTVTWSAMI 493
+ R +FD + ++ VTW++++
Sbjct: 532 IGNGRLVFDSMKGRNEVTWTSLM 554
Score = 70.5 bits (171), Expect = 2e-10
Identities = 52/169 (30%), Positives = 75/169 (44%), Gaps = 6/169 (3%)
Frame = +2
Query: 5 KCRMISDAHRIFASHFSPNIVSWNA---LIGGYGHNGMCDKALDLFNEMVSLGIKPNAIS 175
KC+ IS I S I++ N LI Y G A+ L + +
Sbjct: 37 KCKTISQLKLIHQQLISAGILTLNRTSHLISTYISLGCSSAAVSLLHRFPPS--EAGVYH 94
Query: 176 WCSIISSYAQNDRSEEAIRFYDDMMLHGVEPDCVTVASVLRACAELGSVEKGKEIHEYAA 355
W S+I Y NDR E++ + M PD T V +AC ++ S G H +
Sbjct: 95 WNSLIRVYCDNDRVSESLSLFRLMHSLSWTPDNYTFPFVFKACGDISSFRCGVSAHALSQ 154
Query: 356 KRGLASETMVANALVAMYAKCDSLDTSREIFDG---IARKDTVTWSAMI 493
G S V NALVAMY++ SL +R++FD I D V+W+++I
Sbjct: 155 FTGFNSNVFVGNALVAMYSRFGSLADARKVFDEMSVIGVWDVVSWNSII 203
>gb|EPS64702.1| hypothetical protein M569_10080 [Genlisea aurea]
Length = 498
Score = 136 bits (343), Expect = 3e-30
Identities = 65/170 (38%), Positives = 110/170 (64%), Gaps = 5/170 (2%)
Frame = +2
Query: 2 AKCRMISDAHRIFASHFSPNIVSWNALIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWC 181
++CR++ DA ++F + ++VSWN++I GY +G D AL LF M + N I+W
Sbjct: 159 SECRVLEDAWKVFDEMSNRDVVSWNSIIAGYLRSGNLDSALGLFRRMNQ---RKNIITWN 215
Query: 182 SIISSYAQNDRSEEAIRFYDDMML-----HGVEPDCVTVASVLRACAELGSVEKGKEIHE 346
S+I+ Q R++EA+ F+ +M + + V+PD VTVAS + ACA LG++++GK +H
Sbjct: 216 SVITGLVQCGRAKEALGFFHEMQVSENENNAVKPDKVTVASAISACASLGAIDQGKWMHS 275
Query: 347 YAAKRGLASETMVANALVAMYAKCDSLDTSREIFDGIARKDTVTWSAMIA 496
Y +RG+ + ++ ALV MY KC ++ + ++FDG+ KD ++W+AMI+
Sbjct: 276 YLKRRGMECDLVMGTALVDMYGKCGFVEKAFQVFDGMKNKDVLSWTAMIS 325
Score = 68.2 bits (165), Expect = 1e-09
Identities = 35/124 (28%), Positives = 67/124 (54%), Gaps = 3/124 (2%)
Frame = +2
Query: 134 NEMVSLGIKPNAISWCSIISSYAQNDR---SEEAIRFYDDMMLHGVEPDCVTVASVLRAC 304
N++ + P + ++I + A R S E Y M+ +G+ PDCVT VL+ C
Sbjct: 64 NKIFNRTPNPTIYMYNAMIRANATKTRHPDSCECFVLYKQMVGNGLVPDCVTFPFVLKEC 123
Query: 305 AELGSVEKGKEIHEYAAKRGLASETMVANALVAMYAKCDSLDTSREIFDGIARKDTVTWS 484
+ G+ +H++ K G + V N L+ +Y++C L+ + ++FD ++ +D V+W+
Sbjct: 124 WRRFDLVAGRSLHDHLVKFGYETNVFVQNGLIRLYSECRVLEDAWKVFDEMSNRDVVSWN 183
Query: 485 AMIA 496
++IA
Sbjct: 184 SIIA 187
Score = 61.6 bits (148), Expect = 1e-07
Identities = 31/92 (33%), Positives = 53/92 (57%)
Frame = +2
Query: 59 NIVSWNALIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWCSIISSYAQNDRSEEAIRFY 238
++V AL+ YG G +KA +F+ M + + +SW ++IS++A + +A +
Sbjct: 285 DLVMGTALVDMYGKCGFVEKAFQVFDGMKNKDV----LSWTAMISAFALHGNGSKAFELF 340
Query: 239 DDMMLHGVEPDCVTVASVLRACAELGSVEKGK 334
+ M + GV+P+ VT S L AC+ G VEKG+
Sbjct: 341 EQMEMAGVKPNAVTYVSALSACSHSGLVEKGR 372
Score = 56.6 bits (135), Expect = 3e-06
Identities = 42/181 (23%), Positives = 76/181 (41%), Gaps = 34/181 (18%)
Frame = +2
Query: 5 KCRMISDAHRIFASHFSPNIVSWNALIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWCS 184
KC + A ++F + +++SW A+I + +G KA +LF +M G+KPNA+++ S
Sbjct: 298 KCGFVEKAFQVFDGMKNKDVLSWTAMISAFALHGNGSKAFELFEQMEMAGVKPNAVTYVS 357
Query: 185 IISSYAQNDRSEEAIRFYDDMMLH----------------------------------GV 262
+S+ + + E+ R+Y D M +
Sbjct: 358 ALSACSHSGLVEKG-RWYFDRMTRVHHIMPLLEHYACMISMFGRAGLFNEAEQFIRSMPI 416
Query: 263 EPDCVTVASVLRACAELGSVEKGKEIHEYAAKRGLASETMVANALVAMYAKCDSLDTSRE 442
EPD S+L AC + G+V G +I + + + L +Y+K + D +
Sbjct: 417 EPDIFIWGSLLGACQQHGNVTLGVKIAQRLIELEPHNHAFYI-VLCDLYSKSERFDDQKR 475
Query: 443 I 445
I
Sbjct: 476 I 476
>ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 702
Score = 135 bits (340), Expect = 6e-30
Identities = 68/165 (41%), Positives = 104/165 (63%), Gaps = 1/165 (0%)
Frame = +2
Query: 5 KCRMISDAHRIFASHFSPNIVSWNALIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWCS 184
+C + A +IF+ N+VS+N +I GY NG +KA +LF++M +G + ISW S
Sbjct: 189 RCADMGSALKIFSGFSVKNVVSYNTMIVGYCENGNVEKAKELFDQMELVG--KDTISWNS 246
Query: 185 IISSYAQNDRSEEAIRFYDDMMLH-GVEPDCVTVASVLRACAELGSVEKGKEIHEYAAKR 361
+IS YA N +EA+ + D+++ G+E D T+ SVL ACA++ S+ +GKE+H A R
Sbjct: 247 MISGYADNLLFDEALSMFRDLLMEEGIEADSFTLGSVLAACADMASLRRGKEVHAQAVVR 306
Query: 362 GLASETMVANALVAMYAKCDSLDTSREIFDGIARKDTVTWSAMIA 496
GL T V ALV MY+KC+ L ++ FDG+ +DT TW+ +I+
Sbjct: 307 GLHWNTFVGGALVEMYSKCEDLKAAQLAFDGVTERDTATWNVLIS 351
Score = 106 bits (265), Expect = 3e-21
Identities = 50/164 (30%), Positives = 89/164 (54%)
Frame = +2
Query: 2 AKCRMISDAHRIFASHFSPNIVSWNALIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWC 181
+KC + A F + +WN LI GY + +L +M G +PN +W
Sbjct: 323 SKCEDLKAAQLAFDGVTERDTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWN 382
Query: 182 SIISSYAQNDRSEEAIRFYDDMMLHGVEPDCVTVASVLRACAELGSVEKGKEIHEYAAKR 361
IIS + +N +E A+R + +M + PD TV +L ACA L ++ +GK++H ++ ++
Sbjct: 383 GIISGHVENGHNELALRLFTEMQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQ 442
Query: 362 GLASETMVANALVAMYAKCDSLDTSREIFDGIARKDTVTWSAMI 493
G + + ALV MYAKC S+ + ++++ I+ + V+ +AM+
Sbjct: 443 GYELDVHIGAALVDMYAKCGSIKHAMQVYNRISNPNLVSQNAML 486
Score = 67.0 bits (162), Expect = 2e-09
Identities = 39/140 (27%), Positives = 70/140 (50%), Gaps = 1/140 (0%)
Frame = +2
Query: 77 ALIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWCSIISSYAQNDRSEEAIRFYDDMMLH 256
AL+ Y G A+ ++N + + PN +S +++++YA + +E I + +M+ +
Sbjct: 453 ALVDMYAKCGSIKHAMQVYNRISN----PNLVSQNAMLTAYAMHGHGDEGIALFRNMLGN 508
Query: 257 GVEPDCVTVASVLRACAELGSVEKGKEIHEYAAKRGLASETMVANALVAMYAKCDSLDTS 436
G PD VT SVL +C G+VE G E + + +V + ++ LD +
Sbjct: 509 GFRPDHVTFLSVLSSCVHAGAVETGHEFFDLMTYYNVTPSLKHYTCIVDLLSRAGRLDEA 568
Query: 437 REIFDGIARK-DTVTWSAMI 493
E+ I RK D+V W A++
Sbjct: 569 YELVKKIPRKPDSVMWGALL 588
Score = 58.9 bits (141), Expect = 7e-07
Identities = 30/113 (26%), Positives = 57/113 (50%)
Frame = +2
Query: 2 AKCRMISDAHRIFASHFSPNIVSWNALIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWC 181
AKC I A +++ +PN+VS NA++ Y +G D+ + LF M+ G +P+ +++
Sbjct: 459 AKCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFRPDHVTFL 518
Query: 182 SIISSYAQNDRSEEAIRFYDDMMLHGVEPDCVTVASVLRACAELGSVEKGKEI 340
S++SS E F+D M + V P ++ + G +++ E+
Sbjct: 519 SVLSSCVHAGAVETGHEFFDLMTYYNVTPSLKHYTCIVDLLSRAGRLDEAYEL 571
Score = 57.8 bits (138), Expect = 2e-06
Identities = 39/154 (25%), Positives = 77/154 (50%), Gaps = 15/154 (9%)
Frame = +2
Query: 80 LIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWCSIISSYAQNDRSEEAIRFYDDMMLHG 259
L+ YG G D A +F +M + N SW +I+S + + EEA+ ++ + L
Sbjct: 100 LLQMYGRFGCLDDANLVFVKMP----QRNLYSWTAILSVHVDHGYFEEALSLFEKLQLDD 155
Query: 260 VEPDCVTVASVLRACAELGSVEKGKEIHEYAAKR------------GLASETMVA-NALV 400
+ + VL+ C L +E G+++H KR G + + +V+ N ++
Sbjct: 156 IGLEFFVFPVVLKLCGGLRVLELGRQLHGVVIKRCADMGSALKIFSGFSVKNVVSYNTMI 215
Query: 401 AMYAKCDSLDTSREIFD--GIARKDTVTWSAMIA 496
Y + +++ ++E+FD + KDT++W++MI+
Sbjct: 216 VGYCENGNVEKAKELFDQMELVGKDTISWNSMIS 249
>ref|XP_004238610.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Solanum lycopersicum]
Length = 884
Score = 135 bits (339), Expect = 7e-30
Identities = 59/146 (40%), Positives = 93/146 (63%)
Frame = +2
Query: 56 PNIVSWNALIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWCSIISSYAQNDRSEEAIRF 235
P +++WN LI Y G CD+AL++ EM GI P+ +W S+IS +Q++R+ +A+
Sbjct: 274 PGLITWNILIASYNQLGRCDEALEVMKEMEGNGIMPDVFTWTSLISGMSQHNRNSQALEL 333
Query: 236 YDDMMLHGVEPDCVTVASVLRACAELGSVEKGKEIHEYAAKRGLASETMVANALVAMYAK 415
+ +M+L+GV P VT+ S + ACA L + KGKE+H K G +V NALV +Y+K
Sbjct: 334 FREMILNGVTPSEVTLTSTVSACASLKDLRKGKELHSLVVKLGFDGGVIVGNALVDLYSK 393
Query: 416 CDSLDTSREIFDGIARKDTVTWSAMI 493
C L+ +R++FD I KD +W+++I
Sbjct: 394 CGKLEAARQVFDMIPEKDVYSWNSLI 419
Score = 114 bits (286), Expect = 1e-23
Identities = 58/149 (38%), Positives = 93/149 (62%), Gaps = 1/149 (0%)
Frame = +2
Query: 53 SPNIVSWNALIGGYGHNGMCDKALDLFNEMVSLG-IKPNAISWCSIISSYAQNDRSEEAI 229
SPN+++WN LI G+ NG D+ALDLF M G ++ +A SW ++I+ Y N + ++A+
Sbjct: 444 SPNVITWNVLITGHMQNGDEDQALDLFWRMEKDGNVERDAASWNALIAGYLHNGQKDKAL 503
Query: 230 RFYDDMMLHGVEPDCVTVASVLRACAELGSVEKGKEIHEYAAKRGLASETMVANALVAMY 409
+ M G++P+ VT+ S+L ACA L +K KEIH + L +E +AN+L+ Y
Sbjct: 504 GIFRKMQSSGLKPNTVTILSILPACANLIGAKKVKEIHCCVLRCNLENELSIANSLIDTY 563
Query: 410 AKCDSLDTSREIFDGIARKDTVTWSAMIA 496
+K L S+ IFD ++ KD ++W+ +IA
Sbjct: 564 SKSGGLQYSKTIFDVMSTKDIISWNTLIA 592
Score = 90.1 bits (222), Expect = 3e-16
Identities = 48/138 (34%), Positives = 80/138 (57%)
Frame = +2
Query: 80 LIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWCSIISSYAQNDRSEEAIRFYDDMMLHG 259
L+G Y G +A ++F++M K + +W ++I + +++ R E + + MM G
Sbjct: 115 LLGMYSKCGSLQEAYEMFDKMR----KRDLFAWSAMIGACSRDSRWSEVMELFYMMMGDG 170
Query: 260 VEPDCVTVASVLRACAELGSVEKGKEIHEYAAKRGLASETMVANALVAMYAKCDSLDTSR 439
V PD +L+A A G VE G IH A + G++SE V N+L+A+YAKC L ++
Sbjct: 171 VVPDSFLFPRILQASANCGDVETGMLIHSIAIRCGMSSEIRVNNSLLAVYAKCGLLGCAK 230
Query: 440 EIFDGIARKDTVTWSAMI 493
IF+ + +DTV+W++MI
Sbjct: 231 RIFESMEMRDTVSWNSMI 248
>gb|EOY14874.1| Pentatricopeptide repeat (PPR-like) superfamily protein isoform 1
[Theobroma cacao] gi|508722978|gb|EOY14875.1|
Pentatricopeptide repeat (PPR-like) superfamily protein
isoform 1 [Theobroma cacao]
Length = 890
Score = 134 bits (337), Expect = 1e-29
Identities = 61/147 (41%), Positives = 92/147 (62%)
Frame = +2
Query: 56 PNIVSWNALIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWCSIISSYAQNDRSEEAIRF 235
P +V+WN LI Y G CD A+ L EM I P+ +W S+IS AQN R +A+
Sbjct: 278 PCLVTWNILINSYNQLGQCDVAMGLMKEMEISRIIPDVFTWTSMISGLAQNGRRWQALCL 337
Query: 236 YDDMMLHGVEPDCVTVASVLRACAELGSVEKGKEIHEYAAKRGLASETMVANALVAMYAK 415
+ +M+L G++P+ VT+ S + ACA L + G+EIH A K+G+ +V N+L+ MYAK
Sbjct: 338 FKEMLLAGIKPNGVTITSAVSACASLRVLNMGREIHSIALKKGIIDNVLVGNSLIDMYAK 397
Query: 416 CDSLDTSREIFDGIARKDTVTWSAMIA 496
C L+ +R++FD I +D TW++M+A
Sbjct: 398 CGELEAARQVFDKIEERDVYTWNSMVA 424
Score = 107 bits (267), Expect = 2e-21
Identities = 55/151 (36%), Positives = 87/151 (57%), Gaps = 1/151 (0%)
Frame = +2
Query: 44 SHFSPNIVSWNALIGGYGHNGMCDKALDLFNEMVSLG-IKPNAISWCSIISSYAQNDRSE 220
S PN+++WN +I GY NG D+A+DLF M G I+ N SW + I+ Y Q +
Sbjct: 445 SDLKPNVITWNTMISGYIQNGDEDRAMDLFQRMEQDGKIRRNTASWNAFIAGYVQLGEID 504
Query: 221 EAIRFYDDMMLHGVEPDCVTVASVLRACAELGSVEKGKEIHEYAAKRGLASETMVANALV 400
+A + M V + VT+ S+L CA L + +K KEIH +R L ++N+L+
Sbjct: 505 KAFGVFRQMQSCSVSSNSVTILSILPGCANLVAAKKVKEIHGCVLRRNLEFVLSISNSLI 564
Query: 401 AMYAKCDSLDTSREIFDGIARKDTVTWSAMI 493
YAK ++ SR IFDG++ +D ++W+++I
Sbjct: 565 DTYAKSGNILYSRIIFDGMSTRDIISWNSII 595
Score = 79.3 bits (194), Expect = 5e-13
Identities = 42/138 (30%), Positives = 74/138 (53%)
Frame = +2
Query: 80 LIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWCSIISSYAQNDRSEEAIRFYDDMMLHG 259
L+ Y G A +F++M + N +W ++I + ++ R +E + + MM G
Sbjct: 119 LVSMYAKCGSFVDARKVFDKMK----ERNLYAWSAMIGACSRELRWKEVVELFFLMMEDG 174
Query: 260 VEPDCVTVASVLRACAELGSVEKGKEIHEYAAKRGLASETMVANALVAMYAKCDSLDTSR 439
V PD + L+ACA G V G+ +H + G+ V+N+++A+YAKC L ++R
Sbjct: 175 VLPDEILFPKFLQACANCGDVRTGRLLHSLVIRLGMVCFARVSNSVLAVYAKCGKLSSAR 234
Query: 440 EIFDGIARKDTVTWSAMI 493
F+ + +D VTW++MI
Sbjct: 235 RFFENMNERDIVTWNSMI 252
Score = 62.8 bits (151), Expect = 5e-08
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 2/106 (1%)
Frame = +2
Query: 182 SIISSYAQNDRSEEAIRFYDDMMLHGVEPDCVTVASVLRACAELGSVEKGKEIHEYAAKR 361
S ++ ++N R EAI D + G + T ++L+AC + GS+E G+++H A+
Sbjct: 49 SHLNYLSRNGRLTEAITALDSIAQSGSQVRANTFINLLQACIDFGSLELGRKLH---ARV 105
Query: 362 GLASET--MVANALVAMYAKCDSLDTSREIFDGIARKDTVTWSAMI 493
L E+ V LV+MYAKC S +R++FD + ++ WSAMI
Sbjct: 106 HLVKESDPFVETKLVSMYAKCGSFVDARKVFDKMKERNLYAWSAMI 151
Score = 57.8 bits (138), Expect = 2e-06
Identities = 52/173 (30%), Positives = 73/173 (42%), Gaps = 40/173 (23%)
Frame = +2
Query: 2 AKCRMISDAHRIFASHFSPNIVSWNALIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWC 181
AK I + IF + +I+SWN++IGGY +G D ALDLFN+M LG+KPN ++
Sbjct: 568 AKSGNILYSRIIFDGMSTRDIISWNSIIGGYVLHGCSDAALDLFNQMRKLGLKPNRGTFL 627
Query: 182 SIISS------------------------------------YAQNDRSEEAIRFYDDMML 253
SII + Y ++ R EA+ F +DM
Sbjct: 628 SIILAHGIAGMVDEGKQIFSSISDNYEIIPAVEHYAAMIDVYGRSGRLGEAVEFIEDM-- 685
Query: 254 HGVEPDCVTVASVLRACAELGSVEKGKEIHEYAAKRGLASETMV----ANALV 400
+EPD S+L A IH A LA E ++ AN L+
Sbjct: 686 -PIEPDSSVWTSLLTA----------SRIHRDIALAVLAGERLLDLEPANILI 727
>ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Vitis vinifera]
Length = 541
Score = 134 bits (337), Expect = 1e-29
Identities = 68/163 (41%), Positives = 96/163 (58%)
Frame = +2
Query: 5 KCRMISDAHRIFASHFSPNIVSWNALIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWCS 184
KC + DAH++F + VSWN LI G+ G +A +F EM I SW +
Sbjct: 164 KCDSLDDAHKVFEEMTERDAVSWNTLISGHVRLGQMRRARAIFEEMQDKTI----FSWTA 219
Query: 185 IISSYAQNDRSEEAIRFYDDMMLHGVEPDCVTVASVLRACAELGSVEKGKEIHEYAAKRG 364
I+S YA+ +A+ F+ M + G+EPD +++ SVL ACA+LG++E GK IH YA K G
Sbjct: 220 IVSGYARIGCYADALEFFRRMQMVGIEPDEISLVSVLPACAQLGALELGKWIHFYADKAG 279
Query: 365 LASETMVANALVAMYAKCDSLDTSREIFDGIARKDTVTWSAMI 493
V NAL+ MYAKC S+D R +FD + +D ++WS MI
Sbjct: 280 FLRNICVCNALIEMYAKCGSIDEGRRLFDQMNERDVISWSTMI 322
Score = 81.3 bits (199), Expect = 1e-13
Identities = 42/117 (35%), Positives = 67/117 (57%), Gaps = 5/117 (4%)
Frame = +2
Query: 161 PNAISWCSIISSYAQNDRSEEAIRFYDDMMLHG-----VEPDCVTVASVLRACAELGSVE 325
PNA + ++I +Y N AI Y M+ H + PD T V+++CA L +
Sbjct: 75 PNAFLYNAMIRAYKHNKVYVLAITVYKQMLGHSHGENPIFPDKFTFPFVVKSCAGLMCYD 134
Query: 326 KGKEIHEYAAKRGLASETMVANALVAMYAKCDSLDTSREIFDGIARKDTVTWSAMIA 496
GK++H + K G S T+V N+LV MY KCDSLD + ++F+ + +D V+W+ +I+
Sbjct: 135 LGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHKVFEEMTERDAVSWNTLIS 191
Score = 60.8 bits (146), Expect = 2e-07
Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 3/152 (1%)
Frame = +2
Query: 50 FSPNIVSWNALIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWCSIISSYAQNDRSEEAI 229
F NI NALI Y G D+ LF++M + ISW ++I A + R+ EAI
Sbjct: 280 FLRNICVCNALIEMYAKCGSIDEGRRLFDQMNERDV----ISWSTMIVGLANHGRAHEAI 335
Query: 230 RFYDDMMLHGVEPDCVTVASVLRACAELGSVEKGKEIHEYAAKRGLASETMVAN--ALVA 403
+ +M +EP+ +T +L ACA G + +G E + KR E V + LV
Sbjct: 336 ELFQEMQKAKIEPNIITFVGLLSACAHAGLLNEGLRYFE-SMKRDYNIEPGVEHYGCLVN 394
Query: 404 MYAKCDSLDTSREIFDGIARK-DTVTWSAMIA 496
+ LD + E+ + K D+ W ++++
Sbjct: 395 LLGLSGRLDQALELIKKMPMKPDSAIWGSLLS 426
Score = 58.5 bits (140), Expect = 9e-07
Identities = 29/114 (25%), Positives = 59/114 (51%), Gaps = 1/114 (0%)
Frame = +2
Query: 2 AKCRMISDAHRIFASHFSPNIVSWNALIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWC 181
AKC I + R+F +++SW+ +I G ++G +A++LF EM I+PN I++
Sbjct: 295 AKCGSIDEGRRLFDQMNERDVISWSTMIVGLANHGRAHEAIELFQEMQKAKIEPNIITFV 354
Query: 182 SIISSYAQNDRSEEAIRFYDDMML-HGVEPDCVTVASVLRACAELGSVEKGKEI 340
++S+ A E +R+++ M + +EP ++ G +++ E+
Sbjct: 355 GLLSACAHAGLLNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALEL 408
>ref|XP_004487456.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Cicer arietinum]
Length = 512
Score = 133 bits (335), Expect = 2e-29
Identities = 65/164 (39%), Positives = 100/164 (60%)
Frame = +2
Query: 2 AKCRMISDAHRIFASHFSPNIVSWNALIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWC 181
AKC A +F N+VSWN +IGGY NG + AL LF+EM NA+SW
Sbjct: 132 AKCGRAGSARLVFDQMGVRNLVSWNTMIGGYMKNGEIEDALKLFDEMPM----KNAVSWT 187
Query: 182 SIISSYAQNDRSEEAIRFYDDMMLHGVEPDCVTVASVLRACAELGSVEKGKEIHEYAAKR 361
SII + + D EEA+ + +M L GV PD VTV +V+ ACA LG++ G +H + K+
Sbjct: 188 SIIGGFVKRDCHEEAVECFREMQLDGVVPDYVTVIAVISACANLGALGLGLWVHRFVMKK 247
Query: 362 GLASETMVANALVAMYAKCDSLDTSREIFDGIARKDTVTWSAMI 493
V+N+L+ MYA+C + +R++FDG+++++ V+W+++I
Sbjct: 248 EFRDNVKVSNSLIDMYARCGCIGFARQVFDGMSQRNLVSWNSII 291
Score = 72.0 bits (175), Expect = 8e-11
Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 4/111 (3%)
Frame = +2
Query: 173 SWCSIISSYAQNDRSEEAIRFYDDMMLHGVEPDCVTVASVLRACAELGSVEK---GKEIH 343
SW + IS + +N EA + M G+EP+ +T+ ++L ACA S+ G +H
Sbjct: 49 SWTATISHHCRNGHLHEAASEFTRMRESGIEPNNITLITLLSACAHQPSITTITFGATLH 108
Query: 344 EYAAKRGLA-SETMVANALVAMYAKCDSLDTSREIFDGIARKDTVTWSAMI 493
YA K G A ++ V AL+ MYAKC ++R +FD + ++ V+W+ MI
Sbjct: 109 AYAFKHGFAVNDIKVGTALIDMYAKCGRAGSARLVFDQMGVRNLVSWNTMI 159
Score = 58.2 bits (139), Expect = 1e-06
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 1/105 (0%)
Frame = +2
Query: 29 HR-IFASHFSPNIVSWNALIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWCSIISSYAQ 205
HR + F N+ N+LI Y G A +F+ M + N +SW SII +A
Sbjct: 241 HRFVMKKEFRDNVKVSNSLIDMYARCGCIGFARQVFDGMS----QRNLVSWNSIIIGFAV 296
Query: 206 NDRSEEAIRFYDDMMLHGVEPDCVTVASVLRACAELGSVEKGKEI 340
N ++EA+ F+ M G EPD V+ L AC+ G +++G +I
Sbjct: 297 NGHADEALSFFYSMKKEGFEPDGVSYTGALTACSHAGLIDEGLKI 341
>ref|XP_002282128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20540
[Vitis vinifera]
Length = 537
Score = 133 bits (335), Expect = 2e-29
Identities = 68/163 (41%), Positives = 95/163 (58%)
Frame = +2
Query: 5 KCRMISDAHRIFASHFSPNIVSWNALIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWCS 184
KC + DAHR+F + VSWN LI G+ G +A +F EM I SW +
Sbjct: 164 KCDSLDDAHRVFEEMTERDAVSWNTLISGHVRLGQMRRARAIFEEMQDKTI----FSWTA 219
Query: 185 IISSYAQNDRSEEAIRFYDDMMLHGVEPDCVTVASVLRACAELGSVEKGKEIHEYAAKRG 364
I+S YA+ +A+ F+ M + G+EPD +++ SVL CA+LG++E GK IH YA K G
Sbjct: 220 IVSGYARIGCYADALEFFRRMQMVGIEPDEISLVSVLPDCAQLGALELGKWIHIYADKAG 279
Query: 365 LASETMVANALVAMYAKCDSLDTSREIFDGIARKDTVTWSAMI 493
V NAL+ MYAKC S+D R +FD + +D ++WS MI
Sbjct: 280 FLRNICVCNALIEMYAKCGSIDQGRRLFDQMKERDVISWSTMI 322
Score = 79.3 bits (194), Expect = 5e-13
Identities = 43/117 (36%), Positives = 67/117 (57%), Gaps = 5/117 (4%)
Frame = +2
Query: 161 PNAISWCSIISSYAQNDRSEEAIRFYDDMM--LHG---VEPDCVTVASVLRACAELGSVE 325
PNA + ++I +Y N AI Y M+ HG + PD T V+++CA L +
Sbjct: 75 PNAFLYNAMIRAYKHNKVYVLAITVYKQMLGNPHGENPIFPDKFTFPFVVKSCAGLMCYD 134
Query: 326 KGKEIHEYAAKRGLASETMVANALVAMYAKCDSLDTSREIFDGIARKDTVTWSAMIA 496
GK++H + K G S T+V N+LV MY KCDSLD + +F+ + +D V+W+ +I+
Sbjct: 135 LGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHRVFEEMTERDAVSWNTLIS 191
Score = 62.0 bits (149), Expect = 8e-08
Identities = 46/152 (30%), Positives = 72/152 (47%), Gaps = 3/152 (1%)
Frame = +2
Query: 50 FSPNIVSWNALIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWCSIISSYAQNDRSEEAI 229
F NI NALI Y G D+ LF++M + ISW ++I A + R+ EAI
Sbjct: 280 FLRNICVCNALIEMYAKCGSIDQGRRLFDQMKERDV----ISWSTMIVGLANHGRAREAI 335
Query: 230 RFYDDMMLHGVEPDCVTVASVLRACAELGSVEKGKEIHEYAAKRGLASETMVAN--ALVA 403
+ +M +EP +T +L ACA G + +G E + KR E V + LV
Sbjct: 336 ELFQEMQKAKIEPSIITFVGLLTACAHAGLLNEGLRYFE-SMKRDYNIEPGVEHYGCLVN 394
Query: 404 MYAKCDSLDTSREIFDGIARK-DTVTWSAMIA 496
+ LD + E+ + RK D+ W ++++
Sbjct: 395 LLGLSGRLDQALELVKKMPRKPDSPIWGSLLS 426
>gb|ESW09151.1| hypothetical protein PHAVU_009G104600g [Phaseolus vulgaris]
Length = 527
Score = 133 bits (334), Expect = 3e-29
Identities = 67/163 (41%), Positives = 100/163 (61%)
Frame = +2
Query: 5 KCRMISDAHRIFASHFSPNIVSWNALIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWCS 184
KC +S A+++F + VSWN+LI G+ G A + F+EM I +SW +
Sbjct: 155 KCGDLSGAYQVFEEMADRDSVSWNSLISGHARLGQMKSAREAFDEMPCRTI----VSWTT 210
Query: 185 IISSYAQNDRSEEAIRFYDDMMLHGVEPDCVTVASVLRACAELGSVEKGKEIHEYAAKRG 364
+I+ YA+ S EA+ + +M + G+EPD ++V SVL ACA+LG++E GK IH+Y+ K G
Sbjct: 211 MINGYARAGCSVEALEIFREMQVVGIEPDEISVISVLPACAQLGALEVGKWIHKYSEKSG 270
Query: 365 LASETMVANALVAMYAKCDSLDTSREIFDGIARKDTVTWSAMI 493
+T V NAL+ MY+KC +D S +FD + KD + WS MI
Sbjct: 271 FLKKTAVCNALIEMYSKCGCIDESLGLFDQMVEKDVICWSTMI 313
Score = 74.3 bits (181), Expect = 2e-11
Identities = 36/115 (31%), Positives = 67/115 (58%), Gaps = 3/115 (2%)
Frame = +2
Query: 161 PNAISWCSIISSYAQNDRSEEAIRFYDDMMLHGVE---PDCVTVASVLRACAELGSVEKG 331
PN S+ +II + N + AI +++M+ H ++ PD T SV+++CA + G
Sbjct: 68 PNVFSYNAIIRTCTHNHKHSLAITVFNEMLRHAMKSALPDKFTFPSVIKSCAGILCHRLG 127
Query: 332 KEIHEYAAKRGLASETMVANALVAMYAKCDSLDTSREIFDGIARKDTVTWSAMIA 496
+++H K G S + NAL+ MY KC L + ++F+ +A +D+V+W+++I+
Sbjct: 128 QQVHAQVCKFGPKSHAITDNALIDMYTKCGDLSGAYQVFEEMADRDSVSWNSLIS 182
Score = 57.0 bits (136), Expect = 3e-06
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 2/143 (1%)
Frame = +2
Query: 74 NALIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWCSIISSYAQNDRSEEAIRFYDDMML 253
NALI Y G D++L LF++MV + + I W ++I A + + AIR ++DM
Sbjct: 279 NALIEMYSKCGCIDESLGLFDQMV----EKDVICWSTMIGGLANHGKGYAAIRVFEDMQN 334
Query: 254 HGVEPDCVTVASVLRACAELGSVEKGKEIHE-YAAKRGLASETMVANALVAMYAKCDSLD 430
GV P+ VT VL AC G ++G + L E LV + +C L
Sbjct: 335 AGVAPNGVTFVGVLSACVHAGLWKEGLRYFDVMRVDHHLEPEIEHYGCLVDLLGRCGRLH 394
Query: 431 TSRE-IFDGIARKDTVTWSAMIA 496
+ + I + D+ W+ +++
Sbjct: 395 QALDTIMTMPMQPDSRIWNTLLS 417
>ref|XP_006832838.1| hypothetical protein AMTR_s00095p00038100 [Amborella trichopoda]
gi|548837338|gb|ERM98116.1| hypothetical protein
AMTR_s00095p00038100 [Amborella trichopoda]
Length = 464
Score = 133 bits (334), Expect = 3e-29
Identities = 65/166 (39%), Positives = 101/166 (60%), Gaps = 2/166 (1%)
Frame = +2
Query: 2 AKCRMISDAHRIFASHFSPNIVSWNALIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWC 181
AKC ++ +A +F + +IVSWN+++ G NG C++A+ L +M +L I N I+W
Sbjct: 159 AKCELMGEALSVFQNMGVKDIVSWNSIVTGLSQNGRCEEAMKLMAKMEALKIGLNVITWS 218
Query: 182 SIISSYAQNDRSEEAIRFYDDMMLHGVEPDCVTVASVLRACAELGSVEKGKEIHEYAAKR 361
++IS YAQ R EA+R + +M + EP+ VT+ S+L AC+ G++ G+EIH Y K
Sbjct: 219 AVISGYAQRGRGTEALRVFREMQVARAEPNHVTLISLLSACSSAGALLHGREIHAYITKF 278
Query: 362 GLASETMVANALVAMYAKCDSLDTSREIFDGIA--RKDTVTWSAMI 493
G MV NAL+ YAKC + + +FD +A ++ VTW+ MI
Sbjct: 279 GWCDNLMVKNALIDTYAKCRDYEHALRLFDSVAFTERNVVTWTVMI 324
Score = 100 bits (248), Expect = 3e-19
Identities = 54/149 (36%), Positives = 86/149 (57%), Gaps = 1/149 (0%)
Frame = +2
Query: 50 FSPNIVSWNALIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWCSIISSYAQNDRSEEAI 229
F NI N+LI Y A +F+EM ++ +AISW S+I++Y+QN A+
Sbjct: 42 FVSNIFVSNSLIAFYARCSEISVAHQVFDEM----LERDAISWNSLIAAYSQNYHPAGAL 97
Query: 230 RFYDDMMLH-GVEPDCVTVASVLRACAELGSVEKGKEIHEYAAKRGLASETMVANALVAM 406
+ MM+H +PD VT+ +VL AC L + G EIH Y + GL+ + +V NAL+ M
Sbjct: 98 DVFAHMMMHENPKPDRVTIVNVLPACGTLRAGRSGCEIHAYTMRHGLSEDVLVGNALIDM 157
Query: 407 YAKCDSLDTSREIFDGIARKDTVTWSAMI 493
YAKC+ + + +F + KD V+W++++
Sbjct: 158 YAKCELMGEALSVFQNMGVKDIVSWNSIV 186
Score = 63.5 bits (153), Expect = 3e-08
Identities = 24/79 (30%), Positives = 46/79 (58%)
Frame = +2
Query: 260 VEPDCVTVASVLRACAELGSVEKGKEIHEYAAKRGLASETMVANALVAMYAKCDSLDTSR 439
+ PD T + ++C L + G+ +H AA G S V+N+L+A YA+C + +
Sbjct: 7 LNPDNFTFPFLFKSCGSLSLISLGRVLHALAATLGFVSNIFVSNSLIAFYARCSEISVAH 66
Query: 440 EIFDGIARKDTVTWSAMIA 496
++FD + +D ++W+++IA
Sbjct: 67 QVFDEMLERDAISWNSLIA 85
Score = 63.2 bits (152), Expect = 4e-08
Identities = 34/119 (28%), Positives = 62/119 (52%)
Frame = +2
Query: 59 NIVSWNALIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWCSIISSYAQNDRSEEAIRFY 238
N++ NALI Y + AL LF+ + + N ++W +I YAQN + EA++F+
Sbjct: 283 NLMVKNALIDTYAKCRDYEHALRLFDSVAFT--ERNVVTWTVMIGGYAQNGHANEALQFF 340
Query: 239 DDMMLHGVEPDCVTVASVLRACAELGSVEKGKEIHEYAAKRGLASETMVANALVAMYAK 415
M+ P+ T++ L ACA L ++ GK+IH + + +++ + A ++ K
Sbjct: 341 SQMLTAKASPNAFTISCALIACAHLSALRIGKQIHAFVFRHRVSALLCLMGACSELHKK 399
>ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g16860 gi|9755687|emb|CAC01699.1| putative protein
[Arabidopsis thaliana] gi|332004967|gb|AED92350.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 850
Score = 132 bits (333), Expect = 4e-29
Identities = 70/173 (40%), Positives = 103/173 (59%), Gaps = 9/173 (5%)
Frame = +2
Query: 2 AKCRMISDAHRIFASHFSPNIVSWNALIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWC 181
AKC M+ +A+ +F++ ++VSWNA++ GY G + A+ LF +M IK + ++W
Sbjct: 275 AKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWS 334
Query: 182 SIISSYAQNDRSEEAIRFYDDMMLHGVEPDCVTVASVLRACAELGSVEKGKEIHEYA--- 352
+ IS YAQ EA+ M+ G++P+ VT+ SVL CA +G++ GKEIH YA
Sbjct: 335 AAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKY 394
Query: 353 ----AKRGLASETMVANALVAMYAKCDSLDTSREIFDGIARK--DTVTWSAMI 493
K G E MV N L+ MYAKC +DT+R +FD ++ K D VTW+ MI
Sbjct: 395 PIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMI 447
Score = 92.8 bits (229), Expect = 4e-17
Identities = 52/150 (34%), Positives = 79/150 (52%), Gaps = 1/150 (0%)
Frame = +2
Query: 50 FSPNIVSWNALIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWCSIISSYAQNDRSEEAI 229
F N+ NAL+ Y A +F+EM + +SW SII SYA+ + + A+
Sbjct: 158 FISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDV----VSWNSIIESYAKLGKPKVAL 213
Query: 230 RFYDDMMLH-GVEPDCVTVASVLRACAELGSVEKGKEIHEYAAKRGLASETMVANALVAM 406
+ M G PD +T+ +VL CA LG+ GK++H +A + V N LV M
Sbjct: 214 EMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDM 273
Query: 407 YAKCDSLDTSREIFDGIARKDTVTWSAMIA 496
YAKC +D + +F ++ KD V+W+AM+A
Sbjct: 274 YAKCGMMDEANTVFSNMSVKDVVSWNAMVA 303
Score = 78.6 bits (192), Expect = 8e-13
Identities = 52/166 (31%), Positives = 76/166 (45%), Gaps = 3/166 (1%)
Frame = +2
Query: 5 KCRMISDAHRIFASHFSPNIVSWNA---LIGGYGHNGMCDKALDLFNEMVSLGIKPNAIS 175
KC+ IS I S I++ N LI Y G A+ L
Sbjct: 37 KCKTISQVKLIHQKLLSFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDA--GVYH 94
Query: 176 WCSIISSYAQNDRSEEAIRFYDDMMLHGVEPDCVTVASVLRACAELGSVEKGKEIHEYAA 355
W S+I SY N + + + + M PD T V +AC E+ SV G+ H +
Sbjct: 95 WNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSL 154
Query: 356 KRGLASETMVANALVAMYAKCDSLDTSREIFDGIARKDTVTWSAMI 493
G S V NALVAMY++C SL +R++FD ++ D V+W+++I
Sbjct: 155 VTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSII 200
Score = 76.3 bits (186), Expect = 4e-12
Identities = 46/152 (30%), Positives = 80/152 (52%), Gaps = 3/152 (1%)
Frame = +2
Query: 47 HFSPNIVSWNALIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWCSIISSYAQNDRSEEA 226
H N+V N LI Y D A +F+ + + + ++W +I Y+Q+ + +A
Sbjct: 403 HGDENMVI-NQLIDMYAKCKKVDTARAMFDSLSPK--ERDVVTWTVMIGGYSQHGDANKA 459
Query: 227 IRFYDDMMLHGVE--PDCVTVASVLRACAELGSVEKGKEIHEYAAKRGL-ASETMVANAL 397
+ +M + P+ T++ L ACA L ++ GK+IH YA + A V+N L
Sbjct: 460 LELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCL 519
Query: 398 VAMYAKCDSLDTSREIFDGIARKDTVTWSAMI 493
+ MYAKC S+ +R +FD + K+ VTW++++
Sbjct: 520 IDMYAKCGSISDARLVFDNMMAKNEVTWTSLM 551
Score = 56.2 bits (134), Expect = 4e-06
Identities = 27/90 (30%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Frame = +2
Query: 2 AKCRMISDAHRIFASHFSPNIVSWNALIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWC 181
AKC ISDA +F + + N V+W +L+ GYG +G ++AL +F+EM +G K + ++
Sbjct: 524 AKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLL 583
Query: 182 SIISSYAQNDRSEEAIRFYDDM-MLHGVEP 268
++ + + + ++ + +++ M + GV P
Sbjct: 584 VVLYACSHSGMIDQGMEYFNRMKTVFGVSP 613
>ref|XP_006471568.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Citrus sinensis]
Length = 860
Score = 132 bits (332), Expect = 5e-29
Identities = 67/172 (38%), Positives = 103/172 (59%), Gaps = 8/172 (4%)
Frame = +2
Query: 2 AKCRMISDAHRIFASHFSPNIVSWNALIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWC 181
AKC M+ +A ++F ++VSWNA++ GY G + A LF +M +K N ++W
Sbjct: 286 AKCGMMEEAKKVFERMKVKDVVSWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWS 345
Query: 182 SIISSYAQNDRSEEAIRFYDDMMLHGVEPDCVTVASVLRACAELGSVEKGKEIHEYAAKR 361
++I+ YAQ EA+ + M G+EP+ VT+ S+L CA +G++ GKE H Y KR
Sbjct: 346 AVIAGYAQRGHGHEALDVFRQMQFCGLEPNVVTLVSLLSGCASVGALLLGKETHCYTIKR 405
Query: 362 GLAS------ETMVANALVAMYAKCDSLDTSREIFDGIA--RKDTVTWSAMI 493
L++ + MV NAL+ MYAKC S++ +R +FD IA ++D TW+ MI
Sbjct: 406 VLSADGNHPDDLMVINALIDMYAKCKSVNVARVMFDAIAPKKRDVATWTVMI 457
Score = 97.8 bits (242), Expect = 1e-18
Identities = 54/154 (35%), Positives = 90/154 (58%), Gaps = 1/154 (0%)
Frame = +2
Query: 35 IFASHFSPNIVSWNALIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWCSIISSYAQNDR 214
I +S F N+ NAL+ Y A LF+EM GI + +SW +I+++YAQ+
Sbjct: 161 ICSSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGIC-DIVSWNTIVAAYAQSGD 219
Query: 215 SEEAIRFYDDMMLH-GVEPDCVTVASVLRACAELGSVEKGKEIHEYAAKRGLASETMVAN 391
+E + + M V+ D V++ + L ACA LG+ +GK++H +A + L + V N
Sbjct: 220 AEGGLMLFARMTGDVKVQGDGVSLVNALSACASLGTWSRGKQVHGHALRTMLIEDVFVGN 279
Query: 392 ALVAMYAKCDSLDTSREIFDGIARKDTVTWSAMI 493
ALV MYAKC ++ ++++F+ + KD V+W+AM+
Sbjct: 280 ALVDMYAKCGMMEEAKKVFERMKVKDVVSWNAMV 313
Score = 75.9 bits (185), Expect = 5e-12
Identities = 52/172 (30%), Positives = 80/172 (46%), Gaps = 8/172 (4%)
Frame = +2
Query: 5 KCRMISDAHRIFASHFSPNI--VSWNALIGGYGHNGMCDKALDLFNEMVSLGIKPNAIS- 175
+C+ ++ + I N+ V + LI Y + AL L I P+ S
Sbjct: 46 QCKSLTQVYLIHQQIIVQNLTHVPPSHLIAAYVSHNAPSPALSLLQR-----ISPSPFSV 100
Query: 176 --WCSIISSYAQNDRSEEAIRFYDDMMLHGVEPDCVTVASVLRACAELGSVEKGKEIHEY 349
W ++I + + A R + MM G PD T VL+AC EL S G +H
Sbjct: 101 FWWNALIRRAVRLRLPDNAFRLFLQMMRRGWHPDEYTFPFVLKACGELPSSRCGSSVHAV 160
Query: 350 AAKRGLASETMVANALVAMYAKCDSLDTSREIFDGIARK---DTVTWSAMIA 496
G S V NAL+AMYA+CD+L +R++FD + + D V+W+ ++A
Sbjct: 161 ICSSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGICDIVSWNTIVA 212
Score = 70.9 bits (172), Expect = 2e-10
Identities = 39/143 (27%), Positives = 76/143 (53%), Gaps = 3/143 (2%)
Frame = +2
Query: 74 NALIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWCSIISSYAQNDRSEEAIRFYDDMML 253
NALI Y + A +F+ + K + +W +I Y+Q+ + +A+ + M
Sbjct: 421 NALIDMYAKCKSVNVARVMFDAIAPK--KRDVATWTVMIGGYSQHGEANDALALFPQMFQ 478
Query: 254 HG--VEPDCVTVASVLRACAELGSVEKGKEIHEYAAKRGLASET-MVANALVAMYAKCDS 424
V+P+ T++ L ACA L ++ G++IH Y + VAN L+ MY++
Sbjct: 479 QDKLVKPNAFTLSCALMACARLAALRFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGD 538
Query: 425 LDTSREIFDGIARKDTVTWSAMI 493
+DT+R +FD + +++ V+W++++
Sbjct: 539 IDTARVVFDNLKQRNVVSWTSLM 561
Score = 61.2 bits (147), Expect = 1e-07
Identities = 37/142 (26%), Positives = 73/142 (51%), Gaps = 2/142 (1%)
Frame = +2
Query: 74 NALIGGYGHNGMCDKALDLFNEMVSLGIKPNAISWCSIISSYAQNDRSEEAIRFYDDMML 253
N LI Y +G D A +F+ + + N +SW S+++ Y + ++A +D M
Sbjct: 527 NCLIDMYSRSGDIDTARVVFDNLK----QRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRK 582
Query: 254 HGVEPDCVTVASVLRACAELGSVEKGKEIHEYAAKR-GLASETMVANALVAMYAKCDSLD 430
G+ PD VT +L AC+ G V++G + + +K G+++ +V + + + LD
Sbjct: 583 EGLAPDGVTFLVLLYACSHSGMVDQGLKYFDSMSKEFGISARAEHYACIVDLLGRANRLD 642
Query: 431 TSREIFDGIARKDT-VTWSAMI 493
+ E+ +G+ + T + W A++
Sbjct: 643 EAVELIEGMPMEPTPIIWVALL 664