BLASTX nr result

ID: Ephedra28_contig00020689 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00020689
         (538 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001757510.1| predicted protein [Physcomitrella patens] gi...    60   4e-07
ref|XP_002881734.1| hypothetical protein ARALYDRAFT_483124 [Arab...    56   6e-06
gb|ESW16973.1| hypothetical protein PHAVU_007G199400g [Phaseolus...    55   8e-06
ref|XP_006375728.1| pre-mRNA splicing factor PRP38 family protei...    55   8e-06
ref|XP_003556528.1| PREDICTED: pre-mRNA-splicing factor 38A-like...    55   8e-06
ref|NP_001242475.1| uncharacterized protein LOC100792466 [Glycin...    55   8e-06

>ref|XP_001757510.1| predicted protein [Physcomitrella patens]
           gi|162691204|gb|EDQ77567.1| predicted protein
           [Physcomitrella patens]
          Length = 357

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 26/29 (89%), Positives = 29/29 (100%)
 Frame = +3

Query: 387 VTDGTDHPDPEIAEANKLRAALGLKPLQP 473
           VTDGTDHPDPEIAEAN++RAALGLKPL+P
Sbjct: 329 VTDGTDHPDPEIAEANRIRAALGLKPLRP 357


>ref|XP_002881734.1| hypothetical protein ARALYDRAFT_483124 [Arabidopsis lyrata subsp.
           lyrata] gi|297327573|gb|EFH57993.1| hypothetical protein
           ARALYDRAFT_483124 [Arabidopsis lyrata subsp. lyrata]
          Length = 355

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/27 (88%), Positives = 27/27 (100%)
 Frame = +3

Query: 393 DGTDHPDPEIAEANKLRAALGLKPLQP 473
           DGTDHPDPEIAEAN+LRA+LGLKPL+P
Sbjct: 329 DGTDHPDPEIAEANRLRASLGLKPLRP 355


>gb|ESW16973.1| hypothetical protein PHAVU_007G199400g [Phaseolus vulgaris]
          Length = 380

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = +3

Query: 393 DGTDHPDPEIAEANKLRAALGLKPLQ 470
           DGTDHPDPEIAEANKLRAALGLKPL+
Sbjct: 354 DGTDHPDPEIAEANKLRAALGLKPLK 379


>ref|XP_006375728.1| pre-mRNA splicing factor PRP38 family protein [Populus trichocarpa]
           gi|550324677|gb|ERP53525.1| pre-mRNA splicing factor
           PRP38 family protein [Populus trichocarpa]
          Length = 324

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = +3

Query: 393 DGTDHPDPEIAEANKLRAALGLKPLQ 470
           DGTDHPDPEIAEANKLRAALGLKPL+
Sbjct: 299 DGTDHPDPEIAEANKLRAALGLKPLK 324


>ref|XP_003556528.1| PREDICTED: pre-mRNA-splicing factor 38A-like [Glycine max]
          Length = 383

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = +3

Query: 393 DGTDHPDPEIAEANKLRAALGLKPLQ 470
           DGTDHPDPEIAEANKLRAALGLKPL+
Sbjct: 357 DGTDHPDPEIAEANKLRAALGLKPLR 382


>ref|NP_001242475.1| uncharacterized protein LOC100792466 [Glycine max]
           gi|255642457|gb|ACU21492.1| unknown [Glycine max]
          Length = 381

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = +3

Query: 393 DGTDHPDPEIAEANKLRAALGLKPLQ 470
           DGTDHPDPEIAEANKLRAALGLKPL+
Sbjct: 355 DGTDHPDPEIAEANKLRAALGLKPLR 380


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