BLASTX nr result

ID: Ephedra28_contig00020626 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00020626
         (663 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006828851.1| hypothetical protein AMTR_s00001p00157430 [A...    64   4e-08
ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chlor...    64   4e-08
emb|CAN66750.1| hypothetical protein VITISV_034413 [Vitis vinifera]    64   4e-08
ref|XP_003523282.1| PREDICTED: RNA pseudouridine synthase 2, chl...    64   5e-08
gb|ACG41877.1| RNA binding protein [Zea mays]                          63   7e-08
ref|XP_004161095.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour...    63   9e-08
ref|XP_004143077.1| PREDICTED: RNA pseudourine synthase 2, chlor...    63   9e-08
ref|XP_003603819.1| RNA pseudourine synthase [Medicago truncatul...    63   9e-08
ref|XP_006473714.1| PREDICTED: RNA pseudouridine synthase 2, chl...    62   1e-07
ref|XP_002301949.1| pseudouridine synthase family protein [Popul...    62   2e-07
ref|XP_004500918.1| PREDICTED: RNA pseudourine synthase 2, chlor...    62   2e-07
gb|ESW08114.1| hypothetical protein PHAVU_009G019500g [Phaseolus...    61   3e-07
gb|ESW08113.1| hypothetical protein PHAVU_009G019500g [Phaseolus...    61   3e-07
ref|XP_002977737.1| hypothetical protein SELMODRAFT_107344 [Sela...    60   6e-07
ref|XP_002977735.1| hypothetical protein SELMODRAFT_107717 [Sela...    60   6e-07
ref|XP_006656497.1| PREDICTED: RNA pseudouridine synthase 2, chl...    60   8e-07
ref|XP_006390244.1| hypothetical protein EUTSA_v10018588mg [Eutr...    59   1e-06
ref|XP_002439034.1| hypothetical protein SORBIDRAFT_10g030300 [S...    59   1e-06
ref|XP_003563280.1| PREDICTED: RNA pseudourine synthase 2, chlor...    59   2e-06
ref|XP_004966473.1| PREDICTED: RNA pseudouridine synthase 2, chl...    58   2e-06

>ref|XP_006828851.1| hypothetical protein AMTR_s00001p00157430 [Amborella trichopoda]
           gi|548833830|gb|ERM96267.1| hypothetical protein
           AMTR_s00001p00157430 [Amborella trichopoda]
          Length = 452

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 31/64 (48%), Positives = 44/64 (68%)
 Frame = -2

Query: 662 ERPCLHAYSLGFEHPRTGEKVLFSCPPPQDFMDVLNYFRKLKGVC*SPQTGDY*NVEASM 483
           +RPCLHA+SLGF+HP + E VLF+CPPP DF +VL   R+L+ +  S   G   +  AS+
Sbjct: 391 QRPCLHAFSLGFKHPHSKENVLFTCPPPPDFAEVL---RQLQSIRSSNNHGGLGDQTASL 447

Query: 482 NIVL 471
           ++ L
Sbjct: 448 SLFL 451


>ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Vitis
           vinifera] gi|302141717|emb|CBI18920.3| unnamed protein
           product [Vitis vinifera]
          Length = 433

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 24/41 (58%), Positives = 34/41 (82%)
 Frame = -2

Query: 662 ERPCLHAYSLGFEHPRTGEKVLFSCPPPQDFMDVLNYFRKL 540
           +RPCLHA +LGF HP+TG+ V FSC PP+DF ++L++ RK+
Sbjct: 383 DRPCLHAVALGFNHPKTGKNVHFSCQPPEDFAEILSWLRKI 423


>emb|CAN66750.1| hypothetical protein VITISV_034413 [Vitis vinifera]
          Length = 611

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 24/41 (58%), Positives = 34/41 (82%)
 Frame = -2

Query: 662 ERPCLHAYSLGFEHPRTGEKVLFSCPPPQDFMDVLNYFRKL 540
           +RPCLHA +LGF HP+TG+ V FSC PP+DF ++L++ RK+
Sbjct: 529 DRPCLHAVALGFNHPKTGKNVHFSCQPPEDFAEILSWLRKI 569


>ref|XP_003523282.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like isoform
           X1 [Glycine max] gi|571448797|ref|XP_006577958.1|
           PREDICTED: RNA pseudouridine synthase 2,
           chloroplastic-like isoform X2 [Glycine max]
          Length = 450

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 24/41 (58%), Positives = 34/41 (82%)
 Frame = -2

Query: 662 ERPCLHAYSLGFEHPRTGEKVLFSCPPPQDFMDVLNYFRKL 540
           +RPCLHA++LGF+HP TGE+V FSC PP DF ++L+  R++
Sbjct: 397 DRPCLHAWTLGFQHPHTGEQVHFSCEPPADFAEILSQLRRI 437


>gb|ACG41877.1| RNA binding protein [Zea mays]
          Length = 439

 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 25/41 (60%), Positives = 34/41 (82%)
 Frame = -2

Query: 662 ERPCLHAYSLGFEHPRTGEKVLFSCPPPQDFMDVLNYFRKL 540
           +RPCLHA SLGF+HPR+G+ + FSCPPP DF++VL   R++
Sbjct: 386 DRPCLHAASLGFKHPRSGKVLEFSCPPPDDFLEVLGELRRV 426


>ref|XP_004161095.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 2,
           chloroplastic-like [Cucumis sativus]
          Length = 452

 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 24/41 (58%), Positives = 32/41 (78%)
 Frame = -2

Query: 662 ERPCLHAYSLGFEHPRTGEKVLFSCPPPQDFMDVLNYFRKL 540
           ERPCLHA +LGF HP TG+ + FSCPPP DF ++L+  R++
Sbjct: 381 ERPCLHALTLGFVHPHTGKNIRFSCPPPTDFTEILSQLREI 421


>ref|XP_004143077.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Cucumis
           sativus]
          Length = 453

 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 24/41 (58%), Positives = 32/41 (78%)
 Frame = -2

Query: 662 ERPCLHAYSLGFEHPRTGEKVLFSCPPPQDFMDVLNYFRKL 540
           ERPCLHA +LGF HP TG+ + FSCPPP DF ++L+  R++
Sbjct: 382 ERPCLHALTLGFVHPHTGKNIRFSCPPPTDFTEILSQLREI 422


>ref|XP_003603819.1| RNA pseudourine synthase [Medicago truncatula]
           gi|355492867|gb|AES74070.1| RNA pseudourine synthase
           [Medicago truncatula]
          Length = 465

 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 25/41 (60%), Positives = 33/41 (80%)
 Frame = -2

Query: 662 ERPCLHAYSLGFEHPRTGEKVLFSCPPPQDFMDVLNYFRKL 540
           +RPCLHA +LGF+HP TGE+V FSC PP DF D+L+  R++
Sbjct: 408 DRPCLHASTLGFQHPHTGEQVHFSCEPPVDFNDILSQLRRI 448


>ref|XP_006473714.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like [Citrus
           sinensis]
          Length = 421

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 24/41 (58%), Positives = 32/41 (78%)
 Frame = -2

Query: 662 ERPCLHAYSLGFEHPRTGEKVLFSCPPPQDFMDVLNYFRKL 540
           +RPCLHA +LGF HP T EK+ FSCPPP DF ++L+  R++
Sbjct: 373 QRPCLHAVALGFTHPHTREKIQFSCPPPADFAEILSQLREI 413


>ref|XP_002301949.1| pseudouridine synthase family protein [Populus trichocarpa]
           gi|222843675|gb|EEE81222.1| pseudouridine synthase
           family protein [Populus trichocarpa]
          Length = 444

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 24/41 (58%), Positives = 33/41 (80%)
 Frame = -2

Query: 662 ERPCLHAYSLGFEHPRTGEKVLFSCPPPQDFMDVLNYFRKL 540
           ERPCLHA +LGF HP TG+++ FSCPPP DF ++L+  R++
Sbjct: 395 ERPCLHALALGFTHPCTGKEIHFSCPPPPDFTEILSQLREM 435


>ref|XP_004500918.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Cicer
           arietinum]
          Length = 438

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 24/41 (58%), Positives = 33/41 (80%)
 Frame = -2

Query: 662 ERPCLHAYSLGFEHPRTGEKVLFSCPPPQDFMDVLNYFRKL 540
           +RPCLHA +LGF+HP TGE+V FSC PP DF ++L+  R++
Sbjct: 395 DRPCLHAMTLGFQHPHTGEQVHFSCEPPVDFNEILSQLRRI 435


>gb|ESW08114.1| hypothetical protein PHAVU_009G019500g [Phaseolus vulgaris]
          Length = 447

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 24/41 (58%), Positives = 33/41 (80%)
 Frame = -2

Query: 662 ERPCLHAYSLGFEHPRTGEKVLFSCPPPQDFMDVLNYFRKL 540
           +RPCLHA +LGF+HP TGE+V FSC PP DF ++L+  R++
Sbjct: 394 DRPCLHALTLGFQHPHTGEQVHFSCEPPVDFDEILSQLRRI 434


>gb|ESW08113.1| hypothetical protein PHAVU_009G019500g [Phaseolus vulgaris]
          Length = 458

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 24/41 (58%), Positives = 33/41 (80%)
 Frame = -2

Query: 662 ERPCLHAYSLGFEHPRTGEKVLFSCPPPQDFMDVLNYFRKL 540
           +RPCLHA +LGF+HP TGE+V FSC PP DF ++L+  R++
Sbjct: 405 DRPCLHALTLGFQHPHTGEQVHFSCEPPVDFDEILSQLRRI 445


>ref|XP_002977737.1| hypothetical protein SELMODRAFT_107344 [Selaginella moellendorffii]
           gi|300154440|gb|EFJ21075.1| hypothetical protein
           SELMODRAFT_107344 [Selaginella moellendorffii]
          Length = 421

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 25/41 (60%), Positives = 30/41 (73%)
 Frame = -2

Query: 659 RPCLHAYSLGFEHPRTGEKVLFSCPPPQDFMDVLNYFRKLK 537
           RPCLHAYSLGFEHP T + V F+CPPP+DF +     R +K
Sbjct: 378 RPCLHAYSLGFEHPATEKYVHFTCPPPEDFEEAWTRLRDMK 418


>ref|XP_002977735.1| hypothetical protein SELMODRAFT_107717 [Selaginella moellendorffii]
           gi|300154438|gb|EFJ21073.1| hypothetical protein
           SELMODRAFT_107717 [Selaginella moellendorffii]
          Length = 191

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 25/41 (60%), Positives = 30/41 (73%)
 Frame = -2

Query: 659 RPCLHAYSLGFEHPRTGEKVLFSCPPPQDFMDVLNYFRKLK 537
           RPCLHAYSLGFEHP T + V F+CPPP+DF +     R +K
Sbjct: 148 RPCLHAYSLGFEHPATEKYVHFTCPPPEDFEEAWTRLRDMK 188


>ref|XP_006656497.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like [Oryza
           brachyantha]
          Length = 442

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 24/41 (58%), Positives = 32/41 (78%)
 Frame = -2

Query: 662 ERPCLHAYSLGFEHPRTGEKVLFSCPPPQDFMDVLNYFRKL 540
           +RPCLHA  LGF+HP +G+ + FSCPPP DF +VLN  R++
Sbjct: 386 DRPCLHAALLGFKHPHSGKILEFSCPPPDDFTEVLNELRRV 426


>ref|XP_006390244.1| hypothetical protein EUTSA_v10018588mg [Eutrema salsugineum]
           gi|557086678|gb|ESQ27530.1| hypothetical protein
           EUTSA_v10018588mg [Eutrema salsugineum]
          Length = 432

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 24/40 (60%), Positives = 29/40 (72%)
 Frame = -2

Query: 662 ERPCLHAYSLGFEHPRTGEKVLFSCPPPQDFMDVLNYFRK 543
           +RPCLHA  LGFEHP TGE V FSCPPP D  +++   R+
Sbjct: 386 DRPCLHAIVLGFEHPCTGEVVKFSCPPPSDLAEIVGLLRR 425


>ref|XP_002439034.1| hypothetical protein SORBIDRAFT_10g030300 [Sorghum bicolor]
           gi|241917257|gb|EER90401.1| hypothetical protein
           SORBIDRAFT_10g030300 [Sorghum bicolor]
          Length = 441

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 24/41 (58%), Positives = 32/41 (78%)
 Frame = -2

Query: 662 ERPCLHAYSLGFEHPRTGEKVLFSCPPPQDFMDVLNYFRKL 540
           +RPCLHA  LGF+HP +G+ + FSCPPP DF +VL+  RK+
Sbjct: 389 DRPCLHAALLGFKHPHSGKILEFSCPPPDDFSEVLDELRKV 429


>ref|XP_003563280.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like
           [Brachypodium distachyon]
          Length = 439

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 23/41 (56%), Positives = 32/41 (78%)
 Frame = -2

Query: 662 ERPCLHAYSLGFEHPRTGEKVLFSCPPPQDFMDVLNYFRKL 540
           +RPCLHA  LGF+HP +G+ + FSCPPP DF +VL+  R++
Sbjct: 383 DRPCLHAALLGFKHPHSGKMLEFSCPPPDDFAEVLDELRRV 423


>ref|XP_004966473.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like
           [Setaria italica]
          Length = 437

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 26/52 (50%), Positives = 35/52 (67%)
 Frame = -2

Query: 662 ERPCLHAYSLGFEHPRTGEKVLFSCPPPQDFMDVLNYFRKLKGVC*SPQTGD 507
           +RPCLHA  LGF+HP +G+ + FSCPPP DF +VL+  R++       Q GD
Sbjct: 384 DRPCLHAALLGFKHPHSGKILEFSCPPPDDFTEVLDELRRVTSA--DGQNGD 433


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