BLASTX nr result
ID: Ephedra28_contig00020625
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00020625
(608 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chlor... 65 2e-08
gb|ACG41877.1| RNA binding protein [Zea mays] 65 2e-08
ref|XP_003603819.1| RNA pseudourine synthase [Medicago truncatul... 65 2e-08
emb|CAN66750.1| hypothetical protein VITISV_034413 [Vitis vinifera] 65 2e-08
ref|XP_004161095.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour... 64 4e-08
ref|XP_004143077.1| PREDICTED: RNA pseudourine synthase 2, chlor... 64 4e-08
ref|XP_003523282.1| PREDICTED: RNA pseudouridine synthase 2, chl... 64 4e-08
ref|XP_006473714.1| PREDICTED: RNA pseudouridine synthase 2, chl... 63 5e-08
ref|XP_006828851.1| hypothetical protein AMTR_s00001p00157430 [A... 63 7e-08
ref|XP_004500918.1| PREDICTED: RNA pseudourine synthase 2, chlor... 63 7e-08
ref|XP_002301949.1| pseudouridine synthase family protein [Popul... 63 7e-08
gb|ESW08114.1| hypothetical protein PHAVU_009G019500g [Phaseolus... 62 1e-07
gb|ESW08113.1| hypothetical protein PHAVU_009G019500g [Phaseolus... 62 1e-07
ref|XP_002439034.1| hypothetical protein SORBIDRAFT_10g030300 [S... 62 2e-07
ref|XP_006656497.1| PREDICTED: RNA pseudouridine synthase 2, chl... 61 2e-07
ref|XP_003563280.1| PREDICTED: RNA pseudourine synthase 2, chlor... 61 2e-07
ref|XP_006390244.1| hypothetical protein EUTSA_v10018588mg [Eutr... 60 5e-07
ref|XP_002977737.1| hypothetical protein SELMODRAFT_107344 [Sela... 60 6e-07
ref|XP_002977735.1| hypothetical protein SELMODRAFT_107717 [Sela... 60 6e-07
ref|XP_004966473.1| PREDICTED: RNA pseudouridine synthase 2, chl... 59 8e-07
>ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Vitis
vinifera] gi|302141717|emb|CBI18920.3| unnamed protein
product [Vitis vinifera]
Length = 433
Score = 64.7 bits (156), Expect = 2e-08
Identities = 25/41 (60%), Positives = 35/41 (85%)
Frame = -2
Query: 607 ERPCLHAHSLGFEHPRTGEKVLFSCPPPQDFMDVLNYLRKL 485
+RPCLHA +LGF HP+TG+ V FSC PP+DF ++L++LRK+
Sbjct: 383 DRPCLHAVALGFNHPKTGKNVHFSCQPPEDFAEILSWLRKI 423
>gb|ACG41877.1| RNA binding protein [Zea mays]
Length = 439
Score = 64.7 bits (156), Expect = 2e-08
Identities = 26/41 (63%), Positives = 35/41 (85%)
Frame = -2
Query: 607 ERPCLHAHSLGFEHPRTGEKVLFSCPPPQDFMDVLNYLRKL 485
+RPCLHA SLGF+HPR+G+ + FSCPPP DF++VL LR++
Sbjct: 386 DRPCLHAASLGFKHPRSGKVLEFSCPPPDDFLEVLGELRRV 426
>ref|XP_003603819.1| RNA pseudourine synthase [Medicago truncatula]
gi|355492867|gb|AES74070.1| RNA pseudourine synthase
[Medicago truncatula]
Length = 465
Score = 64.7 bits (156), Expect = 2e-08
Identities = 26/41 (63%), Positives = 34/41 (82%)
Frame = -2
Query: 607 ERPCLHAHSLGFEHPRTGEKVLFSCPPPQDFMDVLNYLRKL 485
+RPCLHA +LGF+HP TGE+V FSC PP DF D+L+ LR++
Sbjct: 408 DRPCLHASTLGFQHPHTGEQVHFSCEPPVDFNDILSQLRRI 448
>emb|CAN66750.1| hypothetical protein VITISV_034413 [Vitis vinifera]
Length = 611
Score = 64.7 bits (156), Expect = 2e-08
Identities = 25/41 (60%), Positives = 35/41 (85%)
Frame = -2
Query: 607 ERPCLHAHSLGFEHPRTGEKVLFSCPPPQDFMDVLNYLRKL 485
+RPCLHA +LGF HP+TG+ V FSC PP+DF ++L++LRK+
Sbjct: 529 DRPCLHAVALGFNHPKTGKNVHFSCQPPEDFAEILSWLRKI 569
>ref|XP_004161095.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 2,
chloroplastic-like [Cucumis sativus]
Length = 452
Score = 63.5 bits (153), Expect = 4e-08
Identities = 25/41 (60%), Positives = 33/41 (80%)
Frame = -2
Query: 607 ERPCLHAHSLGFEHPRTGEKVLFSCPPPQDFMDVLNYLRKL 485
ERPCLHA +LGF HP TG+ + FSCPPP DF ++L+ LR++
Sbjct: 381 ERPCLHALTLGFVHPHTGKNIRFSCPPPTDFTEILSQLREI 421
>ref|XP_004143077.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Cucumis
sativus]
Length = 453
Score = 63.5 bits (153), Expect = 4e-08
Identities = 25/41 (60%), Positives = 33/41 (80%)
Frame = -2
Query: 607 ERPCLHAHSLGFEHPRTGEKVLFSCPPPQDFMDVLNYLRKL 485
ERPCLHA +LGF HP TG+ + FSCPPP DF ++L+ LR++
Sbjct: 382 ERPCLHALTLGFVHPHTGKNIRFSCPPPTDFTEILSQLREI 422
>ref|XP_003523282.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like isoform
X1 [Glycine max] gi|571448797|ref|XP_006577958.1|
PREDICTED: RNA pseudouridine synthase 2,
chloroplastic-like isoform X2 [Glycine max]
Length = 450
Score = 63.5 bits (153), Expect = 4e-08
Identities = 25/41 (60%), Positives = 34/41 (82%)
Frame = -2
Query: 607 ERPCLHAHSLGFEHPRTGEKVLFSCPPPQDFMDVLNYLRKL 485
+RPCLHA +LGF+HP TGE+V FSC PP DF ++L+ LR++
Sbjct: 397 DRPCLHAWTLGFQHPHTGEQVHFSCEPPADFAEILSQLRRI 437
>ref|XP_006473714.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like [Citrus
sinensis]
Length = 421
Score = 63.2 bits (152), Expect = 5e-08
Identities = 25/41 (60%), Positives = 33/41 (80%)
Frame = -2
Query: 607 ERPCLHAHSLGFEHPRTGEKVLFSCPPPQDFMDVLNYLRKL 485
+RPCLHA +LGF HP T EK+ FSCPPP DF ++L+ LR++
Sbjct: 373 QRPCLHAVALGFTHPHTREKIQFSCPPPADFAEILSQLREI 413
>ref|XP_006828851.1| hypothetical protein AMTR_s00001p00157430 [Amborella trichopoda]
gi|548833830|gb|ERM96267.1| hypothetical protein
AMTR_s00001p00157430 [Amborella trichopoda]
Length = 452
Score = 62.8 bits (151), Expect = 7e-08
Identities = 25/42 (59%), Positives = 33/42 (78%)
Frame = -2
Query: 607 ERPCLHAHSLGFEHPRTGEKVLFSCPPPQDFMDVLNYLRKLK 482
+RPCLHA SLGF+HP + E VLF+CPPP DF +VL L+ ++
Sbjct: 391 QRPCLHAFSLGFKHPHSKENVLFTCPPPPDFAEVLRQLQSIR 432
>ref|XP_004500918.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Cicer
arietinum]
Length = 438
Score = 62.8 bits (151), Expect = 7e-08
Identities = 25/41 (60%), Positives = 34/41 (82%)
Frame = -2
Query: 607 ERPCLHAHSLGFEHPRTGEKVLFSCPPPQDFMDVLNYLRKL 485
+RPCLHA +LGF+HP TGE+V FSC PP DF ++L+ LR++
Sbjct: 395 DRPCLHAMTLGFQHPHTGEQVHFSCEPPVDFNEILSQLRRI 435
>ref|XP_002301949.1| pseudouridine synthase family protein [Populus trichocarpa]
gi|222843675|gb|EEE81222.1| pseudouridine synthase
family protein [Populus trichocarpa]
Length = 444
Score = 62.8 bits (151), Expect = 7e-08
Identities = 25/41 (60%), Positives = 34/41 (82%)
Frame = -2
Query: 607 ERPCLHAHSLGFEHPRTGEKVLFSCPPPQDFMDVLNYLRKL 485
ERPCLHA +LGF HP TG+++ FSCPPP DF ++L+ LR++
Sbjct: 395 ERPCLHALALGFTHPCTGKEIHFSCPPPPDFTEILSQLREM 435
>gb|ESW08114.1| hypothetical protein PHAVU_009G019500g [Phaseolus vulgaris]
Length = 447
Score = 62.0 bits (149), Expect = 1e-07
Identities = 25/41 (60%), Positives = 34/41 (82%)
Frame = -2
Query: 607 ERPCLHAHSLGFEHPRTGEKVLFSCPPPQDFMDVLNYLRKL 485
+RPCLHA +LGF+HP TGE+V FSC PP DF ++L+ LR++
Sbjct: 394 DRPCLHALTLGFQHPHTGEQVHFSCEPPVDFDEILSQLRRI 434
>gb|ESW08113.1| hypothetical protein PHAVU_009G019500g [Phaseolus vulgaris]
Length = 458
Score = 62.0 bits (149), Expect = 1e-07
Identities = 25/41 (60%), Positives = 34/41 (82%)
Frame = -2
Query: 607 ERPCLHAHSLGFEHPRTGEKVLFSCPPPQDFMDVLNYLRKL 485
+RPCLHA +LGF+HP TGE+V FSC PP DF ++L+ LR++
Sbjct: 405 DRPCLHALTLGFQHPHTGEQVHFSCEPPVDFDEILSQLRRI 445
>ref|XP_002439034.1| hypothetical protein SORBIDRAFT_10g030300 [Sorghum bicolor]
gi|241917257|gb|EER90401.1| hypothetical protein
SORBIDRAFT_10g030300 [Sorghum bicolor]
Length = 441
Score = 61.6 bits (148), Expect = 2e-07
Identities = 29/52 (55%), Positives = 37/52 (71%)
Frame = -2
Query: 607 ERPCLHAHSLGFEHPRTGEKVLFSCPPPQDFMDVLNYLRKLKGVS*SLQTGD 452
+RPCLHA LGF+HP +G+ + FSCPPP DF +VL+ LRK+ S Q GD
Sbjct: 389 DRPCLHAALLGFKHPHSGKILEFSCPPPDDFSEVLDELRKV--TSSDAQNGD 438
>ref|XP_006656497.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like [Oryza
brachyantha]
Length = 442
Score = 61.2 bits (147), Expect = 2e-07
Identities = 25/41 (60%), Positives = 33/41 (80%)
Frame = -2
Query: 607 ERPCLHAHSLGFEHPRTGEKVLFSCPPPQDFMDVLNYLRKL 485
+RPCLHA LGF+HP +G+ + FSCPPP DF +VLN LR++
Sbjct: 386 DRPCLHAALLGFKHPHSGKILEFSCPPPDDFTEVLNELRRV 426
>ref|XP_003563280.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like
[Brachypodium distachyon]
Length = 439
Score = 61.2 bits (147), Expect = 2e-07
Identities = 27/51 (52%), Positives = 36/51 (70%)
Frame = -2
Query: 607 ERPCLHAHSLGFEHPRTGEKVLFSCPPPQDFMDVLNYLRKLKGVS*SLQTG 455
+RPCLHA LGF+HP +G+ + FSCPPP DF +VL+ LR++ S S G
Sbjct: 383 DRPCLHAALLGFKHPHSGKMLEFSCPPPDDFAEVLDELRRVTPTSDSQDGG 433
>ref|XP_006390244.1| hypothetical protein EUTSA_v10018588mg [Eutrema salsugineum]
gi|557086678|gb|ESQ27530.1| hypothetical protein
EUTSA_v10018588mg [Eutrema salsugineum]
Length = 432
Score = 60.1 bits (144), Expect = 5e-07
Identities = 25/40 (62%), Positives = 30/40 (75%)
Frame = -2
Query: 607 ERPCLHAHSLGFEHPRTGEKVLFSCPPPQDFMDVLNYLRK 488
+RPCLHA LGFEHP TGE V FSCPPP D +++ LR+
Sbjct: 386 DRPCLHAIVLGFEHPCTGEVVKFSCPPPSDLAEIVGLLRR 425
>ref|XP_002977737.1| hypothetical protein SELMODRAFT_107344 [Selaginella moellendorffii]
gi|300154440|gb|EFJ21075.1| hypothetical protein
SELMODRAFT_107344 [Selaginella moellendorffii]
Length = 421
Score = 59.7 bits (143), Expect = 6e-07
Identities = 25/41 (60%), Positives = 31/41 (75%)
Frame = -2
Query: 604 RPCLHAHSLGFEHPRTGEKVLFSCPPPQDFMDVLNYLRKLK 482
RPCLHA+SLGFEHP T + V F+CPPP+DF + LR +K
Sbjct: 378 RPCLHAYSLGFEHPATEKYVHFTCPPPEDFEEAWTRLRDMK 418
>ref|XP_002977735.1| hypothetical protein SELMODRAFT_107717 [Selaginella moellendorffii]
gi|300154438|gb|EFJ21073.1| hypothetical protein
SELMODRAFT_107717 [Selaginella moellendorffii]
Length = 191
Score = 59.7 bits (143), Expect = 6e-07
Identities = 25/41 (60%), Positives = 31/41 (75%)
Frame = -2
Query: 604 RPCLHAHSLGFEHPRTGEKVLFSCPPPQDFMDVLNYLRKLK 482
RPCLHA+SLGFEHP T + V F+CPPP+DF + LR +K
Sbjct: 148 RPCLHAYSLGFEHPATEKYVHFTCPPPEDFEEAWTRLRDMK 188
>ref|XP_004966473.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like
[Setaria italica]
Length = 437
Score = 59.3 bits (142), Expect = 8e-07
Identities = 24/41 (58%), Positives = 33/41 (80%)
Frame = -2
Query: 607 ERPCLHAHSLGFEHPRTGEKVLFSCPPPQDFMDVLNYLRKL 485
+RPCLHA LGF+HP +G+ + FSCPPP DF +VL+ LR++
Sbjct: 384 DRPCLHAALLGFKHPHSGKILEFSCPPPDDFTEVLDELRRV 424