BLASTX nr result

ID: Ephedra28_contig00020541 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00020541
         (531 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004291204.1| PREDICTED: lupus La protein homolog A-like [...    61   2e-07
gb|EXB82279.1| La-like protein [Morus notabilis]                       57   2e-06
ref|XP_002309558.2| hypothetical protein POPTR_0006s25850g [Popu...    56   6e-06
gb|ESW33337.1| hypothetical protein PHAVU_001G061100g [Phaseolus...    55   8e-06
ref|XP_006476089.1| PREDICTED: la protein homolog [Citrus sinensis]    55   1e-05
ref|XP_006450633.1| hypothetical protein CICLE_v10008260mg [Citr...    55   1e-05
ref|XP_006450632.1| hypothetical protein CICLE_v10008260mg [Citr...    55   1e-05
ref|XP_002324815.2| hypothetical protein POPTR_0018s00720g [Popu...    55   1e-05

>ref|XP_004291204.1| PREDICTED: lupus La protein homolog A-like [Fragaria vesca subsp.
           vesca]
          Length = 439

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 36/83 (43%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
 Frame = +3

Query: 9   KARMATT-SEDGGLIVKNCIIKLEALDGEAEKIYWKNIHGRQSRNMDCGQGNRGR-GRHS 182
           KAR A   +E GGL+VKN I  LE + GEAEK YWKN  G Q +  +   GNRGR G++ 
Sbjct: 356 KARAAAVLTELGGLVVKNFIATLEPVSGEAEKEYWKNFRGSQEKFRESKGGNRGRGGKYH 415

Query: 183 KGNWTDRRQRIELHADNQRTKRK 251
           +G     R R + +       RK
Sbjct: 416 RGGHKHGRSRDDNNGGRPNKHRK 438


>gb|EXB82279.1| La-like protein [Morus notabilis]
          Length = 480

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
 Frame = +3

Query: 3   SKKARMATT-SEDGGLIVKNCIIKLEALDGEAEKIYWKNIHGRQSRNMDCGQGNRGR-GR 176
           ++KAR A   +E+GGL+VKN I  LE + G+AE+ YW  + G Q ++ D  +GNRGR G+
Sbjct: 378 TQKARAAAVLAEEGGLVVKNFIATLEPVTGDAERDYWGLLRGNQDKHRDF-KGNRGRGGK 436

Query: 177 HSKGNWTDRRQRIELHADNQRTKRK 251
           H++G    R +  +  A      +K
Sbjct: 437 HNRGRKQSRSRDNDASAGRPSKSQK 461


>ref|XP_002309558.2| hypothetical protein POPTR_0006s25850g [Populus trichocarpa]
           gi|550337094|gb|EEE93081.2| hypothetical protein
           POPTR_0006s25850g [Populus trichocarpa]
          Length = 463

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 31/72 (43%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
 Frame = +3

Query: 3   SKKARMATT-SEDGGLIVKNCIIKLEALDGEAEKIYWKNIHGRQSRNMDCGQGNRGR-GR 176
           ++KAR A   +++ GL+VKN I  LE + GEAEK YW  + G++ R  +  +GNRGR G+
Sbjct: 377 AQKARAAAVLAKEEGLVVKNFIATLEPVTGEAEKEYWNQLRGQKERRFE-NKGNRGRGGK 435

Query: 177 HSKGNWTDRRQR 212
           H +G     R R
Sbjct: 436 HYRGGGKHPRSR 447


>gb|ESW33337.1| hypothetical protein PHAVU_001G061100g [Phaseolus vulgaris]
          Length = 391

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 31/63 (49%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
 Frame = +3

Query: 3   SKKARMATT-SEDGGLIVKNCIIKLEALDGEAEKIYWKNIHGRQSRNMDCGQGNRGRGRH 179
           ++KAR A   SE  GL VKNCI  LE + GEAE+ YW  + G Q +   C   NRGRGR 
Sbjct: 306 AQKARAAVVLSEKEGLDVKNCIAILEPVTGEAEREYWSLLRGNQEKRRGC-MNNRGRGRQ 364

Query: 180 SKG 188
             G
Sbjct: 365 HGG 367


>ref|XP_006476089.1| PREDICTED: la protein homolog [Citrus sinensis]
          Length = 453

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 30/58 (51%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
 Frame = +3

Query: 3   SKKARMATT-SEDGGLIVKNCIIKLEALDGEAEKIYWKNIHGRQSRNMDCGQGNRGRG 173
           ++KAR A   +++GGL VKN I  LE + GEAEK YW  + G Q R+ D  +GNRGRG
Sbjct: 369 AQKARAAAVLAQEGGLSVKNFIAVLEPVTGEAEKEYWSLLRGNQERHRDV-KGNRGRG 425


>ref|XP_006450633.1| hypothetical protein CICLE_v10008260mg [Citrus clementina]
           gi|557553859|gb|ESR63873.1| hypothetical protein
           CICLE_v10008260mg [Citrus clementina]
          Length = 453

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 30/58 (51%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
 Frame = +3

Query: 3   SKKARMATT-SEDGGLIVKNCIIKLEALDGEAEKIYWKNIHGRQSRNMDCGQGNRGRG 173
           ++KAR A   +++GGL VKN I  LE + GEAEK YW  + G Q R+ D  +GNRGRG
Sbjct: 369 AQKARAAAVLAQEGGLSVKNFIAVLEPVTGEAEKEYWSLLRGNQERHRDV-KGNRGRG 425


>ref|XP_006450632.1| hypothetical protein CICLE_v10008260mg [Citrus clementina]
           gi|557553858|gb|ESR63872.1| hypothetical protein
           CICLE_v10008260mg [Citrus clementina]
          Length = 400

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 30/58 (51%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
 Frame = +3

Query: 3   SKKARMATT-SEDGGLIVKNCIIKLEALDGEAEKIYWKNIHGRQSRNMDCGQGNRGRG 173
           ++KAR A   +++GGL VKN I  LE + GEAEK YW  + G Q R+ D  +GNRGRG
Sbjct: 316 AQKARAAAVLAQEGGLSVKNFIAVLEPVTGEAEKEYWSLLRGNQERHRDV-KGNRGRG 372


>ref|XP_002324815.2| hypothetical protein POPTR_0018s00720g [Populus trichocarpa]
           gi|550317738|gb|EEF03380.2| hypothetical protein
           POPTR_0018s00720g [Populus trichocarpa]
          Length = 461

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 32/72 (44%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
 Frame = +3

Query: 3   SKKARMATT-SEDGGLIVKNCIIKLEALDGEAEKIYWKNIHGRQSRNMDCGQGNRGR-GR 176
           ++KAR A   +++ GL+VKN I  LE + GEAEK YW    G + R  +  +GNRGR GR
Sbjct: 375 AQKARAAAVLAKEEGLVVKNFIATLEPVTGEAEKEYWNQFRGHKERRFE-NKGNRGRGGR 433

Query: 177 HSKGNWTDRRQR 212
           + KG     R R
Sbjct: 434 YHKGGGKHPRSR 445


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