BLASTX nr result
ID: Ephedra28_contig00020465
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00020465
(715 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004144985.1| PREDICTED: flap endonuclease GEN-like 1-like... 154 4e-35
ref|XP_004306852.1| PREDICTED: flap endonuclease GEN-like 1-like... 141 2e-31
ref|XP_002320770.2| hypothetical protein POPTR_0014s07330g [Popu... 140 4e-31
gb|EMJ20325.1| hypothetical protein PRUPE_ppa015861mg [Prunus pe... 140 4e-31
ref|XP_006303692.1| hypothetical protein CARUB_v10011785mg [Caps... 140 5e-31
ref|XP_006857917.1| hypothetical protein AMTR_s00069p00141590 [A... 136 8e-30
gb|EXC33535.1| Flap endonuclease GEN-like 1 [Morus notabilis] 135 1e-29
ref|XP_002273159.1| PREDICTED: flap endonuclease GEN-like 1 [Vit... 135 1e-29
ref|XP_006339484.1| PREDICTED: flap endonuclease GEN-like 1-like... 135 2e-29
ref|XP_004229854.1| PREDICTED: flap endonuclease GEN-like 1-like... 132 9e-29
gb|ABN08837.1| Helix-hairpin-helix motif, class 2 [Medicago trun... 131 2e-28
ref|XP_003623847.1| Flap endonuclease GEN-like protein [Medicago... 131 2e-28
ref|XP_002511787.1| DNA binding protein, putative [Ricinus commu... 131 2e-28
ref|XP_006445168.1| hypothetical protein CICLE_v10019320mg [Citr... 130 6e-28
ref|NP_001184887.1| 5'-3' exonuclease family protein [Arabidopsi... 129 7e-28
ref|NP_171691.2| 5'-3' exonuclease family protein [Arabidopsis t... 129 7e-28
ref|XP_006602772.1| PREDICTED: flap endonuclease GEN-like 1-like... 127 3e-27
gb|ESW11919.1| hypothetical protein PHAVU_008G070200g [Phaseolus... 127 4e-27
ref|XP_006445167.1| hypothetical protein CICLE_v10019320mg [Citr... 127 5e-27
sp|Q64MA3.1|GENL1_ORYSJ RecName: Full=Flap endonuclease GEN-like... 125 1e-26
>ref|XP_004144985.1| PREDICTED: flap endonuclease GEN-like 1-like [Cucumis sativus]
gi|449472478|ref|XP_004153607.1| PREDICTED: flap
endonuclease GEN-like 1-like [Cucumis sativus]
gi|449516535|ref|XP_004165302.1| PREDICTED: flap
endonuclease GEN-like 1-like [Cucumis sativus]
Length = 606
Score = 154 bits (388), Expect = 4e-35
Identities = 87/235 (37%), Positives = 127/235 (54%), Gaps = 4/235 (1%)
Frame = -1
Query: 712 ETCVKKQQGFKCACESCKMEHSKKVKTKYLNWTKKTIAKICATEGFPNEDIISIFL--NQ 539
E C+KK GFKC C SC M+ +K K K NW + KI FP+ ++I ++ N
Sbjct: 306 EGCIKKPDGFKCNCSSCNMDREEKEKKKQENWRLRVRNKIAMEPNFPSSELIQMYQCDNH 365
Query: 538 EIFNISELKMSWENPQMEHLENFLQSQLFWPSTYTRRKVLPLCSAMFLREMAMRNQEKSK 359
F+ +L +SW +P+ E L +FL L W +Y R+++LP+ S +FLREMA
Sbjct: 366 SYFSDDDLVLSWGSPRTEMLVDFLVFHLQWEPSYIRQRMLPMLSTIFLREMA-------- 417
Query: 358 TKEGQRLLCHRYVPNSIVRTKVRYTHTFYVLKWEAV--NIGTTTEDWLGCRNELEQAMLS 185
Q LL +Y +SI+R K+RY H+FYV+KW+ I +T ED G +
Sbjct: 418 NNPTQTLLYGQYEFDSILREKIRYGHSFYVVKWKKAVPAISSTYEDSSGEFGTGPDDAID 477
Query: 184 SDTKEEPVGDANEPEAETLEGGRFITTDENMQLLMSACPELVEKFKHEKEMARQR 20
D +++ P+ +G F+ TDENM+L+ +A PE KF EKEM RQ+
Sbjct: 478 VDEAVNLTDESDSPKIHIQDGCSFLLTDENMELVAAAYPEQAAKFLQEKEMKRQK 532
>ref|XP_004306852.1| PREDICTED: flap endonuclease GEN-like 1-like [Fragaria vesca subsp.
vesca]
Length = 626
Score = 141 bits (356), Expect = 2e-31
Identities = 86/239 (35%), Positives = 131/239 (54%), Gaps = 7/239 (2%)
Frame = -1
Query: 712 ETCVKKQQGFKCACESCKMEHSKKVKTKYLNWTKKTIAKICATEGFPNEDIISIFL--NQ 539
E C+KK +GF+C+C SC M+ K + K NW K + KI FPNE+II I+L N
Sbjct: 323 EGCMKKPEGFRCSCSSCNMDRKDKEQKKQENWRLKVLNKIAQEPNFPNEEIIEIYLCNNH 382
Query: 538 EIFNISELK-MSWENPQMEHLENFLQSQLFWPSTYTRRKVLPLCSAMFLREMAMRNQEKS 362
F+ +E +SWE+P+ E L +FL W +Y R+++LP+ S ++LREMA N S
Sbjct: 383 GYFSANEGPCISWESPKTEALVDFLAFHQLWEPSYIRQRMLPMLSTIYLREMA-ENPLYS 441
Query: 361 KTKEGQRLLCHRYVPNSIVRTKVRYTHTFYVLKWEAVNIGTTTEDWLGCRNE----LEQA 194
LL +Y +SI R K+R H FYV+KW+ + T L E L+
Sbjct: 442 -------LLYGQYEFHSIDRLKIRNGHQFYVVKWKRA-VPTVNSVTLANPEEESDILQDD 493
Query: 193 MLSSDTKEEPVGDANEPEAETLEGGRFITTDENMQLLMSACPELVEKFKHEKEMARQRK 17
++ D ++++P+ +G F+ TDENM L+ +A PE V++F EKE+ ++
Sbjct: 494 VIEVDESISVWDESDDPKIRNSDGCYFMLTDENMDLVQAAFPEEVDRFLQEKELKELKR 552
>ref|XP_002320770.2| hypothetical protein POPTR_0014s07330g [Populus trichocarpa]
gi|550323704|gb|EEE99085.2| hypothetical protein
POPTR_0014s07330g [Populus trichocarpa]
Length = 615
Score = 140 bits (353), Expect = 4e-31
Identities = 84/246 (34%), Positives = 131/246 (53%), Gaps = 13/246 (5%)
Frame = -1
Query: 715 NETCVKKQQGFKCACESCKMEHSKKVKTKYLNWTKKTIAKICATEGFPNEDIISIFLNQE 536
++ C++K +GFKC C SC + +K + K+ NW K KI FPN+DII ++L +
Sbjct: 305 SQGCIRKAEGFKCNCSSCNKDRKEKEQQKHENWHIKVCNKISTEPNFPNDDIIRMYLCNK 364
Query: 535 IFNISE---LKMSWENPQMEHLENFLQSQLFWPSTYTRRKVLPLCSAMFLREMAMRNQEK 365
N + L +SW P E L +FL W +Y R+++LP+ S ++LREMA
Sbjct: 365 HGNFTAGDGLCLSWRCPDTEILVDFLDFHQHWEPSYVRQRMLPMLSTIYLREMA------ 418
Query: 364 SKTKEGQRLLCHRYVPNSIVRTKVRYTHTFYVLKWEAVNIGTTTEDWLGCRNELEQAMLS 185
K + +L +YV +SI R K+RY H YV++W V T+T + N +E+
Sbjct: 419 --AKPEKTMLYGQYVFDSIQRVKIRYGHQSYVIRWRKV---TSTAGSIVRTNSVEE---- 469
Query: 184 SDTKEEPVGDANE----------PEAETLEGGRFITTDENMQLLMSACPELVEKFKHEKE 35
SD +E + + +E P+ + F+ TDENM+L+ A PE VE+F HEKE
Sbjct: 470 SDKPQEEIVEIDEFIDHLDEDTAPQIHIDDECCFLLTDENMELIRVAFPEEVERFWHEKE 529
Query: 34 MARQRK 17
+ ++
Sbjct: 530 LKASKR 535
>gb|EMJ20325.1| hypothetical protein PRUPE_ppa015861mg [Prunus persica]
Length = 611
Score = 140 bits (353), Expect = 4e-31
Identities = 84/238 (35%), Positives = 134/238 (56%), Gaps = 6/238 (2%)
Frame = -1
Query: 712 ETCVKKQQGFKCACESCKMEHSKKVKTKYLNWTKKTIAKICATEGFPNEDIISIFLNQEI 533
E C+KK +GFKC+C SC M+ +K + K NW K ++KI FPN+ II ++L
Sbjct: 306 EGCMKKSEGFKCSCSSCDMDRKEKEQKKQDNWRLKVLSKIALEPNFPNDAIIEMYLCNSH 365
Query: 532 FNISELK---MSWENPQMEHLENFLQSQLFWPSTYTRRKVLPLCSAMFLREMAMRNQEKS 362
+E +SW +P+ E + +FL W +Y RR++LP+ S +FLREMA ++ KS
Sbjct: 366 GYFTENDGPCISWGSPKTEMVVDFLAYHQLWEPSYIRRRMLPMLSTIFLREMA-KDPLKS 424
Query: 361 KTKEGQRLLCHRYVPNSIVRTKVRYTHTFYVLKWE--AVNIGTTTEDWLGCRNELEQ-AM 191
LL +Y +SI R K+RY H FYV+KW+ A ++G + ++++Q +
Sbjct: 425 -------LLYGQYEFDSIDRLKIRYGHQFYVVKWKKSAPSLGCVSCTVPPEESDVQQDDV 477
Query: 190 LSSDTKEEPVGDANEPEAETLEGGRFITTDENMQLLMSACPELVEKFKHEKEMARQRK 17
+ D P +++ P + G F+ TDENM L+ +A PE V++F EKE+ ++
Sbjct: 478 MEVDESINPFDESDVPTIDINNGCCFLLTDENMDLVHAAFPEEVDRFLQEKELKELKR 535
>ref|XP_006303692.1| hypothetical protein CARUB_v10011785mg [Capsella rubella]
gi|482572403|gb|EOA36590.1| hypothetical protein
CARUB_v10011785mg [Capsella rubella]
Length = 597
Score = 140 bits (352), Expect = 5e-31
Identities = 80/233 (34%), Positives = 120/233 (51%), Gaps = 3/233 (1%)
Frame = -1
Query: 706 CVKKQQGFKCACESCKMEHSKKVKTKYLNWTKKTIAKICATEGFPNEDIISIFLNQEIFN 527
C+KK GF+C C C M+ K + K +W K KI FPN+DII ++L+ + F
Sbjct: 304 CIKKPSGFRCECSLCSMDRDLKEQKKTEDWWIKVCDKIARGPEFPNKDIIELYLS-DGFT 362
Query: 526 ISELKMSWENPQMEHLENFLQSQLFWPSTYTRRKVLPLCSAMFLREMAMRNQEKSKTKEG 347
MSW P E L +F+ +L W +Y R+ +LP+ SA++LRE A N E
Sbjct: 363 EDGSSMSWGTPDTEMLVDFMVFKLHWDPSYVRKMLLPMLSAIYLRERARNNSENP----- 417
Query: 346 QRLLCHRYVPNSIVRTKVRYTHTFYVLKWEAVNIGTTTEDWLGCRNE---LEQAMLSSDT 176
LLC +Y +SI K RY H F+V++W T + E LE ++ +
Sbjct: 418 --LLCDKYEFHSIKCIKTRYGHQFFVIRWRK---PIYTSGFTHGEPEIVILEDELIEDEE 472
Query: 175 KEEPVGDANEPEAETLEGGRFITTDENMQLLMSACPELVEKFKHEKEMARQRK 17
+P+ NEP+ + G F+ TDE+++L+ SA P+ E F EK++ RK
Sbjct: 473 SGDPLDGLNEPQVQNENGDCFLLTDESIRLVQSAFPDETEHFLREKKLRELRK 525
>ref|XP_006857917.1| hypothetical protein AMTR_s00069p00141590 [Amborella trichopoda]
gi|548862019|gb|ERN19384.1| hypothetical protein
AMTR_s00069p00141590 [Amborella trichopoda]
Length = 647
Score = 136 bits (342), Expect = 8e-30
Identities = 85/244 (34%), Positives = 126/244 (51%), Gaps = 8/244 (3%)
Frame = -1
Query: 712 ETCVKKQQGFKCACESCKMEHSKKVKTKYLNWTKKTIAKICATEGFPNEDIISIFL--NQ 539
E C K Q F C C C E K + K ++W +K KI FPNE+II +FL N
Sbjct: 307 EGCQPKPQNFTCECSHCIEERKSKDQKKCMSWREKICTKIATVGNFPNEEIIEMFLCQNH 366
Query: 538 EIFN-ISELKMSWENPQMEHLENFLQSQLFWPSTYTRRKVLPLCSAMFLREMAMRNQEKS 362
IFN I +SW+ P+ E L +FL+ W + R+ +LPL S +FLREMA R+ E
Sbjct: 367 GIFNGIDGSTLSWKAPETELLVDFLEYHQHWSPSLIRQGMLPLLSTIFLREMASRHTE-- 424
Query: 361 KTKEGQRLLCHRYVPNSIVRTKVRYTHTFYVLKWEAVNIGTTTEDWLGCRN-----ELEQ 197
LLC +Y +SI R K RY H FYV+KW+ + G +N E ++
Sbjct: 425 -----GLLLCDKYEFHSIQREKARYGHPFYVVKWKRAGSFPINLEDFGPKNARIVHEQDE 479
Query: 196 AMLSSDTKEEPVGDANEPEAETLEGGRFITTDENMQLLMSACPELVEKFKHEKEMARQRK 17
+ D + + ++ + T G F++TDE++ L+ +A PE+VE F KE +++
Sbjct: 480 NIDGGDLIDLLDDNPDDHQIITFNGCEFLSTDEDVGLVQAAFPEIVEIFLKGKETKKEKS 539
Query: 16 ITLK 5
+ K
Sbjct: 540 MKNK 543
>gb|EXC33535.1| Flap endonuclease GEN-like 1 [Morus notabilis]
Length = 661
Score = 135 bits (341), Expect = 1e-29
Identities = 82/238 (34%), Positives = 132/238 (55%), Gaps = 5/238 (2%)
Frame = -1
Query: 715 NETCVKKQQGFKCACESCKMEHSKKVKTKYLNWTKKTIAKICATEGFPNEDIISIFL--N 542
N C KK +GFKC C SC + +K + K +W + +KI FPN +II ++L N
Sbjct: 313 NGGCKKKPEGFKCGCMSCDVGRKEKERKKQDHWFDRVSSKIALEPNFPNREIIEMYLCDN 372
Query: 541 QEIFNISELK-MSWENPQMEHLENFLQSQLFWPSTYTRRKVLPLCSAMFLREMAMRNQEK 365
F ++ +SW +P++E L +FL W +Y R+++LP+ S +FLREMA +Q K
Sbjct: 373 HGSFTGNDGPCISWRSPKIELLVDFLAFHQRWEPSYIRQRMLPMLSTIFLREMA-AHQIK 431
Query: 364 SKTKEGQRLLCHRYVPNSIVRTKVRYTHTFYVLKWEAV--NIGTTTEDWLGCRNELEQAM 191
S LL +Y +SI R KVR+ HTFYV+KW G + ++++Q +
Sbjct: 432 S-------LLYGQYDFDSIDRVKVRHGHTFYVIKWSKATPKSGGVSNATCSEVSDMQQDV 484
Query: 190 LSSDTKEEPVGDANEPEAETLEGGRFITTDENMQLLMSACPELVEKFKHEKEMARQRK 17
+ SD + + + + P +G +FI TDEN++L+ +A P +++F EKE+ R+
Sbjct: 485 VDSDESVDLLDEMDAPMIHIKDGCQFILTDENVELVHAAFPRELDRFLREKELKESRR 542
>ref|XP_002273159.1| PREDICTED: flap endonuclease GEN-like 1 [Vitis vinifera]
gi|296089141|emb|CBI38844.3| unnamed protein product
[Vitis vinifera]
Length = 667
Score = 135 bits (341), Expect = 1e-29
Identities = 78/240 (32%), Positives = 129/240 (53%), Gaps = 5/240 (2%)
Frame = -1
Query: 706 CVKKQQGFKCACESCKMEHSKKVKTKYLNWTKKTIAKICATEGFPNEDIISIFLNQEIFN 527
C++K +GF C C +C M+ +K + K NW + KI + FPN +II ++L+ +
Sbjct: 362 CLEKPEGFVCDCSTCDMDRKEKAQKKQENWQLRVCKKIAMEQNFPNNEIIELYLSNNHGH 421
Query: 526 ISEL---KMSWENPQMEHLENFLQSQLFWPSTYTRRKVLPLCSAMFLREMAMRNQEKSKT 356
+E +SWE+P+ E L +FL W +Y R+++LP+ S +F RE A+
Sbjct: 422 FTEKDGPHISWESPKTEVLVDFLAYHQHWEPSYIRQRMLPMLSTIFFREKAL-------- 473
Query: 355 KEGQRLLCHRYVPNSIVRTKVRYTHTFYVLKW-EAVNIGTTTEDWLGCRNELEQAMLSS- 182
LL +Y +SI R KVR+ H F+V+KW +AV+ + + +++EQ L+
Sbjct: 474 NPTNTLLYGQYEFDSIQRVKVRFGHQFFVVKWKKAVHAMASVAYTIPGDSDIEQEKLTEV 533
Query: 181 DTKEEPVGDANEPEAETLEGGRFITTDENMQLLMSACPELVEKFKHEKEMARQRKITLKG 2
D + + + N P+ +G F+ TDENM L+ +A PE V +F EKE+ ++ G
Sbjct: 534 DESIDLLDECNVPQIHVDDGCWFLLTDENMDLVRAAFPEEVNRFLLEKELKESKRRNKSG 593
>ref|XP_006339484.1| PREDICTED: flap endonuclease GEN-like 1-like [Solanum tuberosum]
Length = 603
Score = 135 bits (339), Expect = 2e-29
Identities = 73/237 (30%), Positives = 128/237 (54%), Gaps = 5/237 (2%)
Frame = -1
Query: 715 NETCVKKQQGFKCACESCKMEHSKKVKTKYLNWTKKTIAKICATEGFPNEDIISIFLNQE 536
NE C+KK GFKC C C +++ +K + + NW K +I + + F N +I ++LN++
Sbjct: 305 NEGCIKKPLGFKCNCSPCDLDNKEKEQKRNENWKLKVCRRIASEQNFRNNEITEMYLNKQ 364
Query: 535 IFNISELKMSWENPQMEHLENFLQSQLFWPSTYTRRKVLPLCSAMFLREMAMRNQEKSKT 356
+ +SWENP+++ + ++L W +YTR+++ P+ S ++LR++A +++
Sbjct: 365 QQYDGDYHLSWENPKIDMIVDYLAYYQHWEPSYTRQRMFPMLSTIYLRDVASNSKD---- 420
Query: 355 KEGQRLLCHRYVPNSIVRTKVRYTHTFYVLKW-----EAVNIGTTTEDWLGCRNELEQAM 191
+LL +Y +SI R K R+ H YV+ W E N+ + EL A
Sbjct: 421 ----QLLGGQYEFDSIQRVKTRFGHQLYVINWKKPTREMSNVIFIPSEDSDTEQELGIAG 476
Query: 190 LSSDTKEEPVGDANEPEAETLEGGRFITTDENMQLLMSACPELVEKFKHEKEMARQR 20
S+D +EP + P+ EG F++T+E+M L+ +A PE V +F +KE+ R
Sbjct: 477 ESTDLLDEP----DSPQIHVKEGCSFLSTEEDMVLVQNAFPEKVSQFLRDKELKESR 529
>ref|XP_004229854.1| PREDICTED: flap endonuclease GEN-like 1-like [Solanum lycopersicum]
Length = 603
Score = 132 bits (333), Expect = 9e-29
Identities = 73/237 (30%), Positives = 126/237 (53%), Gaps = 5/237 (2%)
Frame = -1
Query: 715 NETCVKKQQGFKCACESCKMEHSKKVKTKYLNWTKKTIAKICATEGFPNEDIISIFLNQE 536
N+ C++K GFKC C C +++ +K + + NW K KI + + F N +I ++LN++
Sbjct: 305 NKGCIQKPLGFKCDCAPCDLDNKEKEQKRNKNWKLKVCRKIASEQNFRNNEITEMYLNKQ 364
Query: 535 IFNISELKMSWENPQMEHLENFLQSQLFWPSTYTRRKVLPLCSAMFLREMAMRNQEKSKT 356
+ +SWENP+++ + ++L W +YTR+++ P+ S +FLR++A +++
Sbjct: 365 QQYDGDYHLSWENPKIDMIVDYLAYYQHWEPSYTRQRMFPMLSTIFLRDVASNSKD---- 420
Query: 355 KEGQRLLCHRYVPNSIVRTKVRYTHTFYVLKW-----EAVNIGTTTEDWLGCRNELEQAM 191
+LL +Y +SI R K R+ H YV+ W E N+ + EL A
Sbjct: 421 ----QLLGGQYEFDSIQRVKTRFGHQLYVINWKKPTREMSNVTCIPSEDSDTELELGIAD 476
Query: 190 LSSDTKEEPVGDANEPEAETLEGGRFITTDENMQLLMSACPELVEKFKHEKEMARQR 20
S+D EP + P+ EG F++T+E+M L+ +A PE V F +KE+ R
Sbjct: 477 ESTDLLNEP----DSPQIHVKEGCNFLSTEEDMVLVQNAFPEKVSLFLRDKELKESR 529
>gb|ABN08837.1| Helix-hairpin-helix motif, class 2 [Medicago truncatula]
Length = 547
Score = 131 bits (330), Expect = 2e-28
Identities = 79/233 (33%), Positives = 125/233 (53%), Gaps = 5/233 (2%)
Frame = -1
Query: 715 NETCVKKQQGFKCACESCKMEHSKKVKTKYLNWTKKTIAKICATEGFPNEDIISIFL--N 542
NE C+KK +GFKC C SC M K + K NW K KI FP ++II ++L +
Sbjct: 238 NEGCLKKPEGFKCDCNSCCMNRKHKEQKKMENWHTKICDKIAKEPNFPKDEIIDMYLCND 297
Query: 541 QEIFNISE-LKMSWENPQMEHLENFLQSQLFWPSTYTRRKVLPLCSAMFLREMAMRNQEK 365
F+ ++ ++SWE P M+ L +FL W +Y RR + P+ S +FLREMA
Sbjct: 298 NGYFSANDGPQISWERPNMDLLVDFLNFHQNWDPSYIRRIMFPMMSTIFLREMA------ 351
Query: 364 SKTKEGQRLLCHRYVPNSIVRTKVRYTHTFYVLKWEAVNIGTTTEDWLGCRNELEQAMLS 185
T LL ++ S+ R K RY + FYV+KW+ +G ++ +++ ++
Sbjct: 352 --TTPTDSLLFGQFEFASLKRVKTRYGYQFYVVKWKRA-MGNIASKTPANKSGMQEDVIE 408
Query: 184 SDTKE--EPVGDANEPEAETLEGGRFITTDENMQLLMSACPELVEKFKHEKEM 32
D E + + D + P+ +G F+ TDENM L+ +A PE V++F+ E+E+
Sbjct: 409 LDVDETVDLLDDCDFPQICEEDGCSFLLTDENMDLVGAAYPEEVKRFRQEQEL 461
>ref|XP_003623847.1| Flap endonuclease GEN-like protein [Medicago truncatula]
gi|124360235|gb|ABN08248.1| Helix-hairpin-helix motif,
class 2 [Medicago truncatula]
gi|355498862|gb|AES80065.1| Flap endonuclease GEN-like
protein [Medicago truncatula]
Length = 612
Score = 131 bits (330), Expect = 2e-28
Identities = 79/233 (33%), Positives = 125/233 (53%), Gaps = 5/233 (2%)
Frame = -1
Query: 715 NETCVKKQQGFKCACESCKMEHSKKVKTKYLNWTKKTIAKICATEGFPNEDIISIFL--N 542
NE C+KK +GFKC C SC M K + K NW K KI FP ++II ++L +
Sbjct: 303 NEGCLKKPEGFKCDCNSCCMNRKHKEQKKMENWHTKICDKIAKEPNFPKDEIIDMYLCND 362
Query: 541 QEIFNISE-LKMSWENPQMEHLENFLQSQLFWPSTYTRRKVLPLCSAMFLREMAMRNQEK 365
F+ ++ ++SWE P M+ L +FL W +Y RR + P+ S +FLREMA
Sbjct: 363 NGYFSANDGPQISWERPNMDLLVDFLNFHQNWDPSYIRRIMFPMMSTIFLREMA------ 416
Query: 364 SKTKEGQRLLCHRYVPNSIVRTKVRYTHTFYVLKWEAVNIGTTTEDWLGCRNELEQAMLS 185
T LL ++ S+ R K RY + FYV+KW+ +G ++ +++ ++
Sbjct: 417 --TTPTDSLLFGQFEFASLKRVKTRYGYQFYVVKWKRA-MGNIASKTPANKSGMQEDVIE 473
Query: 184 SDTKE--EPVGDANEPEAETLEGGRFITTDENMQLLMSACPELVEKFKHEKEM 32
D E + + D + P+ +G F+ TDENM L+ +A PE V++F+ E+E+
Sbjct: 474 LDVDETVDLLDDCDFPQICEEDGCSFLLTDENMDLVGAAYPEEVKRFRQEQEL 526
>ref|XP_002511787.1| DNA binding protein, putative [Ricinus communis]
gi|223548967|gb|EEF50456.1| DNA binding protein,
putative [Ricinus communis]
Length = 609
Score = 131 bits (329), Expect = 2e-28
Identities = 76/238 (31%), Positives = 123/238 (51%), Gaps = 6/238 (2%)
Frame = -1
Query: 712 ETCVKKQQGFKCACESCKMEHSKKVKTKYLNWTKKTIAKICATEGFPNEDIISIFL---N 542
E C KK F+C C SC + K + K NW K K+ FPN+DII ++L +
Sbjct: 306 EGCTKKSGAFRCNCGSCNKDRKAKEEQKRENWQIKVCDKMFMEPNFPNDDIIEMYLCNNH 365
Query: 541 QEIFNISELKMSWENPQMEHLENFLQSQLFWPSTYTRRKVLPLCSAMFLREMAMRNQEKS 362
E + +SW +P + L +FL W +Y R+++LP+ S ++LR+MA
Sbjct: 366 AEFTEDDDTCLSWGSPNTDMLVDFLAFHKLWHPSYIRQRILPVLSTIYLRDMA------- 418
Query: 361 KTKEGQRLLCHRYVPNSIVRTKVRYTHTFYVLKWEAVNIGTTTEDWLGCRNEL---EQAM 191
K + LL +Y +SI R KVRY H YV+KW+ ++ + EL ++ +
Sbjct: 419 -AKPEKALLYGQYEFDSIQRIKVRYGHESYVIKWKKAANTISSNICINIVEELDKHQEDI 477
Query: 190 LSSDTKEEPVGDANEPEAETLEGGRFITTDENMQLLMSACPELVEKFKHEKEMARQRK 17
+ +D + + + N P++ +G F+ TDENM L+ +A P+ V+KF EKE ++
Sbjct: 478 VKTDESIDQLEEYNVPKSYVDDGCWFLLTDENMDLVQNAFPDAVDKFLKEKEQKESKR 535
>ref|XP_006445168.1| hypothetical protein CICLE_v10019320mg [Citrus clementina]
gi|568875842|ref|XP_006490999.1| PREDICTED: flap
endonuclease GEN-like 1-like isoform X2 [Citrus sinensis]
gi|557547430|gb|ESR58408.1| hypothetical protein
CICLE_v10019320mg [Citrus clementina]
Length = 614
Score = 130 bits (326), Expect = 6e-28
Identities = 81/245 (33%), Positives = 131/245 (53%), Gaps = 8/245 (3%)
Frame = -1
Query: 715 NETCVKKQQGFKCACESCKMEHSKKVKTKYLNWTKKTIAKICATEGFPNEDIISIFL--N 542
NE C+KK GFKC C C +K + K+ W K +KI FPN++I++++L N
Sbjct: 305 NEGCLKKPDGFKCNCSLCNKNRKEKEQKKHETWWIKVCSKIALETNFPNDEIVTMYLCEN 364
Query: 541 QEIFNISE-LKMSWENPQMEHLENFLQSQLFWPSTYTRRKVLPLCSAMFLREMAMRNQEK 365
F ++ +SW +P E L +FL W +Y R+K+LP+ S ++LREMA
Sbjct: 365 NGTFTATDGPSISWGSPMTEMLVDFLVYHQPWQPSYIRQKMLPMLSTIYLREMA------ 418
Query: 364 SKTKEGQRLLCHRYVPNSIVRTKVRYTHTFYVLKW-EAVNIGTTTEDWLGCRNELE-QAM 191
T Q LLC +Y +SI R K+RY H YV+KW +A + + + ++L +
Sbjct: 419 --TNPVQTLLCGQYEFDSIRRVKIRYGHQSYVVKWKKAASAISGVKYTAPVDSDLHLEEF 476
Query: 190 LSSDTKEEPVGDANEPEAETLEGGRFITTDENMQLLMSACPELVEKFKHE---KEMARQR 20
+ D + + +++ P+ F+ TDENM+L+ SA P+ V+ F E +E+ R+R
Sbjct: 477 MEVDEPNDLLDESSNPQIHVDGDCWFLLTDENMKLVHSAFPKKVDHFLQENERRELKRKR 536
Query: 19 KITLK 5
+L+
Sbjct: 537 TSSLR 541
>ref|NP_001184887.1| 5'-3' exonuclease family protein [Arabidopsis thaliana]
gi|332189225|gb|AEE27346.1| 5'-3' exonuclease family
protein [Arabidopsis thaliana]
Length = 598
Score = 129 bits (325), Expect = 7e-28
Identities = 72/233 (30%), Positives = 117/233 (50%), Gaps = 3/233 (1%)
Frame = -1
Query: 706 CVKKQQGFKCACESCKMEHSKKVKTKYLNWTKKTIAKICATEGFPNEDIISIFLNQEIFN 527
C+KK GF+C C C + + + K +W K KI FPN II ++L+ +
Sbjct: 303 CIKKPLGFRCECSFCSKDRDLREQKKTNDWWIKVCDKIALAPEFPNRKIIELYLSDGLMT 362
Query: 526 ISELKMSWENPQMEHLENFLQSQLFWPSTYTRRKVLPLCSAMFLREMAMRNQEKSKTKEG 347
MSW P L + + +L W +Y R+ +LP+ S ++LR EK++ G
Sbjct: 363 GDGSSMSWGTPDTGMLVDLMVFKLHWDPSYVRKMLLPMLSTIYLR-------EKARNNTG 415
Query: 346 QRLLCHRYVPNSIVRTKVRYTHTFYVLKWEAVNIGTTTEDWLGCRNELEQAMLSSDTKEE 167
LLC +Y +SI K RY H +V++W +T + +E E++++ + +EE
Sbjct: 416 YALLCDQYEFHSIKCIKTRYGHQSFVIRWRKPK---STSGYSHSHSEPEESIVVLEEEEE 472
Query: 166 ---PVGDANEPEAETLEGGRFITTDENMQLLMSACPELVEKFKHEKEMARQRK 17
P+ NEP+ + G F+ TDE + L+ SA P+ E F HEK++ +K
Sbjct: 473 SVDPLDGLNEPQVQNDNGDCFLLTDECIGLVQSAFPDETEHFLHEKKLRESKK 525
>ref|NP_171691.2| 5'-3' exonuclease family protein [Arabidopsis thaliana]
gi|357529503|sp|Q9LPD2.3|GENL1_ARATH RecName: Full=Flap
endonuclease GEN-like 1 gi|332189224|gb|AEE27345.1|
5'-3' exonuclease family protein [Arabidopsis thaliana]
Length = 599
Score = 129 bits (325), Expect = 7e-28
Identities = 72/233 (30%), Positives = 117/233 (50%), Gaps = 3/233 (1%)
Frame = -1
Query: 706 CVKKQQGFKCACESCKMEHSKKVKTKYLNWTKKTIAKICATEGFPNEDIISIFLNQEIFN 527
C+KK GF+C C C + + + K +W K KI FPN II ++L+ +
Sbjct: 304 CIKKPLGFRCECSFCSKDRDLREQKKTNDWWIKVCDKIALAPEFPNRKIIELYLSDGLMT 363
Query: 526 ISELKMSWENPQMEHLENFLQSQLFWPSTYTRRKVLPLCSAMFLREMAMRNQEKSKTKEG 347
MSW P L + + +L W +Y R+ +LP+ S ++LR EK++ G
Sbjct: 364 GDGSSMSWGTPDTGMLVDLMVFKLHWDPSYVRKMLLPMLSTIYLR-------EKARNNTG 416
Query: 346 QRLLCHRYVPNSIVRTKVRYTHTFYVLKWEAVNIGTTTEDWLGCRNELEQAMLSSDTKEE 167
LLC +Y +SI K RY H +V++W +T + +E E++++ + +EE
Sbjct: 417 YALLCDQYEFHSIKCIKTRYGHQSFVIRWRKPK---STSGYSHSHSEPEESIVVLEEEEE 473
Query: 166 ---PVGDANEPEAETLEGGRFITTDENMQLLMSACPELVEKFKHEKEMARQRK 17
P+ NEP+ + G F+ TDE + L+ SA P+ E F HEK++ +K
Sbjct: 474 SVDPLDGLNEPQVQNDNGDCFLLTDECIGLVQSAFPDETEHFLHEKKLRESKK 526
>ref|XP_006602772.1| PREDICTED: flap endonuclease GEN-like 1-like [Glycine max]
Length = 606
Score = 127 bits (320), Expect = 3e-27
Identities = 75/236 (31%), Positives = 120/236 (50%), Gaps = 1/236 (0%)
Frame = -1
Query: 715 NETCVKKQQGFKCACESCKMEHSKKVKTKYLNWTKKTIAKICATEGFPNEDIISIFLNQE 536
+E C +K + FKC C SC M K K + NW K KI FP +II ++L +
Sbjct: 304 DEGCQRKPEDFKCDCFSCDMNRKHKEKKRLKNWHTKICHKIAEEPNFPKNEIIDMYLCND 363
Query: 535 IFNISE-LKMSWENPQMEHLENFLQSQLFWPSTYTRRKVLPLCSAMFLREMAMRNQEKSK 359
N S+ + W P +E L +FL W Y RR + P+ S +FLR+M +E
Sbjct: 364 --NASDGPHIVWGKPNIEMLIDFLNFHQHWEPAYVRRMMFPMMSTIFLRDMTTTTEET-- 419
Query: 358 TKEGQRLLCHRYVPNSIVRTKVRYTHTFYVLKWEAVNIGTTTEDWLGCRNELEQAMLSSD 179
+L +Y +SI R K+RY + F+V+KW+ + + + L + + A++ D
Sbjct: 420 ------MLFGQYQFDSIERVKMRYGYQFFVVKWKHAGVNISCKVPLKESSVQQDAIIELD 473
Query: 178 TKEEPVGDANEPEAETLEGGRFITTDENMQLLMSACPELVEKFKHEKEMARQRKIT 11
+ + D + PE G RF+ TDENM L+ +A P V++F ++E+ R++ T
Sbjct: 474 ETVDLLDDCDVPEIHEDSGCRFLLTDENMDLVGAAFPAEVKRFWQDQELKRRKNST 529
>gb|ESW11919.1| hypothetical protein PHAVU_008G070200g [Phaseolus vulgaris]
Length = 609
Score = 127 bits (319), Expect = 4e-27
Identities = 75/238 (31%), Positives = 121/238 (50%), Gaps = 3/238 (1%)
Frame = -1
Query: 715 NETCVKKQQGFKCACESCKMEHSKKVKTKYLNWTKKTIAKICATEGFPNEDIISIFLNQE 536
+E C +K +GFKC C SC K + + NW K KI FP ++II ++L +
Sbjct: 304 DEGCQRKPEGFKCHCFSCVSNRRHKEQKREENWYSKICHKIAEEPNFPKDEIIDMYLCND 363
Query: 535 --IFNISE-LKMSWENPQMEHLENFLQSQLFWPSTYTRRKVLPLCSAMFLREMAMRNQEK 365
F++S+ ++ W P +E L +FL W +Y RR + P+ S +FLR+M+ +E
Sbjct: 364 NGYFSVSDGPQIMWGKPNIEMLIDFLNFHQRWEPSYIRRTMFPMMSTIFLRDMSTPTRET 423
Query: 364 SKTKEGQRLLCHRYVPNSIVRTKVRYTHTFYVLKWEAVNIGTTTEDWLGCRNELEQAMLS 185
LL +Y +S+ R K+RY + FYV+KW TT + ++Q ++
Sbjct: 424 --------LLFGQYEFDSVERVKMRYGYQFYVVKWRRAGGNITTSKVPSNESSVQQDVVE 475
Query: 184 SDTKEEPVGDANEPEAETLEGGRFITTDENMQLLMSACPELVEKFKHEKEMARQRKIT 11
D + + D + PE +G F+ TDENM L+ +A P V+ F E+E ++ T
Sbjct: 476 LDETVDLLDDCSIPEIRVDDGCSFLFTDENMDLVGTAFPAEVQSFLQEQERKSRKSST 533
>ref|XP_006445167.1| hypothetical protein CICLE_v10019320mg [Citrus clementina]
gi|568875840|ref|XP_006490998.1| PREDICTED: flap
endonuclease GEN-like 1-like isoform X1 [Citrus sinensis]
gi|557547429|gb|ESR58407.1| hypothetical protein
CICLE_v10019320mg [Citrus clementina]
Length = 621
Score = 127 bits (318), Expect = 5e-27
Identities = 81/252 (32%), Positives = 130/252 (51%), Gaps = 15/252 (5%)
Frame = -1
Query: 715 NETCVKKQQGFKCACESCKMEHSKKVKTKYLNWTKKTIAKICATEGFPNEDIISIFL--N 542
NE C+KK GFKC C C +K + K+ W K +KI FPN++I++++L N
Sbjct: 305 NEGCLKKPDGFKCNCSLCNKNRKEKEQKKHETWWIKVCSKIALETNFPNDEIVTMYLCEN 364
Query: 541 QEIFNI--------SELKMSWENPQMEHLENFLQSQLFWPSTYTRRKVLPLCSAMFLREM 386
F + +SW +P E L +FL W +Y R+K+LP+ S ++LREM
Sbjct: 365 NGTFTVMGGGIIATDGPSISWGSPMTEMLVDFLVYHQPWQPSYIRQKMLPMLSTIYLREM 424
Query: 385 AMRNQEKSKTKEGQRLLCHRYVPNSIVRTKVRYTHTFYVLKW-EAVNIGTTTEDWLGCRN 209
A T Q LLC +Y +SI R K+RY H YV+KW +A + + + +
Sbjct: 425 A--------TNPVQTLLCGQYEFDSIRRVKIRYGHQSYVVKWKKAASAISGVKYTAPVDS 476
Query: 208 ELE-QAMLSSDTKEEPVGDANEPEAETLEGGRFITTDENMQLLMSACPELVEKFKHE--- 41
+L + + D + + +++ P+ F+ TDENM+L+ SA P+ V+ F E
Sbjct: 477 DLHLEEFMEVDEPNDLLDESSNPQIHVDGDCWFLLTDENMKLVHSAFPKKVDHFLQENER 536
Query: 40 KEMARQRKITLK 5
+E+ R+R +L+
Sbjct: 537 RELKRKRTSSLR 548
>sp|Q64MA3.1|GENL1_ORYSJ RecName: Full=Flap endonuclease GEN-like 1; Short=OsGEN-L;
Short=Protein OsGEN-like; AltName: Full=OsRAD
gi|52075592|dbj|BAD46702.1| putative single-strand DNA
endonuclease-1 [Oryza sativa Japonica Group]
gi|62122402|dbj|BAD93194.1| putative nuclease [Oryza
sativa Japonica Group] gi|62122736|dbj|BAD93331.1|
putative nuclease [Oryza sativa Japonica Group]
gi|215693373|dbj|BAG88755.1| unnamed protein product
[Oryza sativa Japonica Group] gi|222630495|gb|EEE62627.1|
hypothetical protein OsJ_17430 [Oryza sativa Japonica
Group]
Length = 629
Score = 125 bits (315), Expect = 1e-26
Identities = 82/265 (30%), Positives = 134/265 (50%), Gaps = 28/265 (10%)
Frame = -1
Query: 712 ETCVKKQQGFKCACESCKMEHSKKVKTKYLNWTKKTIAKICATEGFPNEDIISIFLNQEI 533
E CV+K GF C C SC KV+ + NW K +I A FPNE+II+++LN +
Sbjct: 314 ENCVEKPAGFICECPSCDKARDLKVQRRNENWQIKVCKRIAAETNFPNEEIINLYLNDDN 373
Query: 532 FNISE--LKMSWENPQMEHLENFLQSQLFWPSTYTRRKVLPLCSAMFLREMAMRNQEKSK 359
+ ++W P ME L +FL + W Y R+++LP+ S ++LREMA +Q KS
Sbjct: 374 LDNENGVPLLTWNKPDMEILVDFLSFKQNWEPAYIRQRMLPMLSTIYLREMA-SSQSKS- 431
Query: 358 TKEGQRLLCHRYVPNSIVRTKVRYTHTFYVLKWEAVNIGTTTEDWLGCRNELE------- 200
LL +Y +SI R K+RY H +Y++KW+ V + D + ELE
Sbjct: 432 -----FLLYDQYKFHSIQRIKIRYGHPYYLVKWKRVTRSMISNDPPSKQTELEGKNDKVE 486
Query: 199 ----QAMLSSDTKEEP---------VGDANEPEAETLEGGRFITTDENMQLLMSACPELV 59
+ + +EEP + + + P+ + F+ TDE+++L+ +A P+
Sbjct: 487 VLDGDDEVVDEEEEEPTMISETTELLDEPDVPQVLDDDKDCFLLTDEDIELVNAAFPDEA 546
Query: 58 EKFKHE------KEMARQRKITLKG 2
++F+ E K +AR+ K+ + G
Sbjct: 547 QRFQEEQRLKEAKSIARKSKLNVAG 571