BLASTX nr result

ID: Ephedra28_contig00020460 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00020460
         (1247 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR17628.1| unknown [Picea sitchensis]                              59   5e-06

>gb|ABR17628.1| unknown [Picea sitchensis]
          Length = 382

 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 43/143 (30%), Positives = 67/143 (46%), Gaps = 11/143 (7%)
 Frame = -3

Query: 399 NDPGLFE--FDHCRVQIAKMVLSKIDFVPAAFELVFYTSLV---LSKKLIADTVT----- 250
           N PGL E  +  C    +K      D+VP A  +VF   L    LS+  +++ V      
Sbjct: 30  NAPGLEEAYWKKCCANSSK------DYVPVACLIVFCMLLPTTSLSRHWLSEMVCQSLNL 83

Query: 249 -TPNQFLGSICAAFCCVAILTFQLAFPQWYQGCRKAILQYLAAILWSWESIQLFLMTEYD 73
            T    L  + A   C A+L  QL F +WYQ  R  +L   A++LW W S++LFL+   +
Sbjct: 84  QTSGNLLWHMFAVVLCSAVLVVQLGFSKWYQSNRGNVLLGFASVLWIWGSLKLFLVNNLE 143

Query: 72  WMYLTYHSLALSTCMGVLHQIPY 4
             +     L     M +L+++P+
Sbjct: 144 LSFSFPVVLIQCIFMSILYRVPF 166


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