BLASTX nr result
ID: Ephedra28_contig00020458
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00020458
(984 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACN40817.1| unknown [Picea sitchensis] 155 2e-35
gb|ABK22259.1| unknown [Picea sitchensis] 137 6e-30
ref|XP_004501453.1| PREDICTED: U1 small nuclear ribonucleoprotei... 128 4e-27
ref|XP_004303492.1| PREDICTED: uncharacterized protein LOC101308... 127 9e-27
ref|XP_003526036.1| PREDICTED: uncharacterized protein LOC100809... 126 1e-26
gb|AFK48970.1| unknown [Lotus japonicus] 126 1e-26
ref|XP_004141330.1| PREDICTED: uncharacterized protein LOC101211... 125 3e-26
ref|XP_006474441.1| PREDICTED: U1 small nuclear ribonucleoprotei... 124 4e-26
ref|XP_006474439.1| PREDICTED: U1 small nuclear ribonucleoprotei... 124 4e-26
ref|XP_006453055.1| hypothetical protein CICLE_v10009319mg [Citr... 124 4e-26
ref|NP_001242381.1| uncharacterized protein LOC100816255 [Glycin... 124 6e-26
gb|ESW08854.1| hypothetical protein PHAVU_009G079800g [Phaseolus... 123 1e-25
gb|EOY23631.1| RNA-binding family protein isoform 1 [Theobroma c... 123 1e-25
gb|EOY29962.1| RNA-binding family protein isoform 1 [Theobroma c... 122 2e-25
ref|XP_002275189.2| PREDICTED: uncharacterized protein LOC100265... 122 2e-25
ref|XP_003603172.1| RNA-binding protein with multiple splicing [... 122 2e-25
emb|CBI23047.3| unnamed protein product [Vitis vinifera] 122 2e-25
gb|EMJ19504.1| hypothetical protein PRUPE_ppa010843mg [Prunus pe... 121 4e-25
ref|XP_002515833.1| nucleic acid binding protein, putative [Rici... 121 4e-25
gb|ABK22075.1| unknown [Picea sitchensis] 121 5e-25
>gb|ACN40817.1| unknown [Picea sitchensis]
Length = 308
Score = 155 bits (393), Expect = 2e-35
Identities = 77/117 (65%), Positives = 94/117 (80%), Gaps = 3/117 (2%)
Frame = +1
Query: 151 RLAEAVIPPS--KSPDQLASDTLPCTIFVEGLPADCTRREVAHIFRPFIGYKQMRVIHKE 324
RL ++ I S + PD L D TIF+EGLPADC+RREVAHIFRPFIGYKQ++VIHKE
Sbjct: 180 RLPDSAISGSTFRLPDHLKPDESSNTIFIEGLPADCSRREVAHIFRPFIGYKQIKVIHKE 239
Query: 325 PRKTGGEPYVLCFVEFVDEKSALSALNALQGYKFDASEND-SNGLKIQLVHFPGTQP 492
PR+ GGEPYVLCFVEF D K AL+AL+AL+GYKFD E+D S+ LK+QL +FPG++P
Sbjct: 240 PRRAGGEPYVLCFVEFTDAKCALTALSALKGYKFDEHEHDSSSSLKLQLANFPGSRP 296
>gb|ABK22259.1| unknown [Picea sitchensis]
Length = 274
Score = 137 bits (345), Expect = 6e-30
Identities = 61/109 (55%), Positives = 81/109 (74%)
Frame = +1
Query: 157 AEAVIPPSKSPDQLASDTLPCTIFVEGLPADCTRREVAHIFRPFIGYKQMRVIHKEPRKT 336
A+ + P + PD+ T+FVEGLPADCTRRE AHIFRPFIG+K++R++ KEPR+
Sbjct: 138 AQGLRDPLRRPDEHLPPDASNTLFVEGLPADCTRREAAHIFRPFIGFKEVRLVQKEPRRP 197
Query: 337 GGEPYVLCFVEFVDEKSALSALNALQGYKFDASENDSNGLKIQLVHFPG 483
GG+P VLCFV+F D + A +AL ALQGYKFD ++ +S GL++Q FPG
Sbjct: 198 GGDPLVLCFVDFTDARCAATALEALQGYKFDETDRESTGLRLQFARFPG 246
>ref|XP_004501453.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cicer
arietinum]
Length = 226
Score = 128 bits (321), Expect = 4e-27
Identities = 70/167 (41%), Positives = 95/167 (56%), Gaps = 6/167 (3%)
Frame = +1
Query: 10 LEPGFSEKPVKANLYSPNEAAAVKVQDSARMEAITKTPESVRPDSAPRLAEAVIPPSKSP 189
+EP + + ++S + A + + TP V P P L +P S
Sbjct: 62 MEPYGVDDTRGSRVHSEHNATGYSHPEDPELSTKRDTPLGVNP-GVPDLNNESMPKSNY- 119
Query: 190 DQLASDTLPCT------IFVEGLPADCTRREVAHIFRPFIGYKQMRVIHKEPRKTGGEPY 351
D +P T +FV GLP DCTRREV H+FRPFIGYK ++++HKEPR++G +
Sbjct: 120 -----DAVPVTAAESNILFVGGLPKDCTRREVGHLFRPFIGYKDIKLVHKEPRRSGDKSM 174
Query: 352 VLCFVEFVDEKSALSALNALQGYKFDASENDSNGLKIQLVHFPGTQP 492
+LCFVEF + K AL+A+ ALQGYKFD + DS+ LKIQ HFP P
Sbjct: 175 ILCFVEFTEPKCALTAMEALQGYKFDDKKPDSSILKIQFAHFPFRPP 221
>ref|XP_004303492.1| PREDICTED: uncharacterized protein LOC101308481 [Fragaria vesca
subsp. vesca]
Length = 288
Score = 127 bits (318), Expect = 9e-27
Identities = 57/90 (63%), Positives = 72/90 (80%)
Frame = +1
Query: 223 IFVEGLPADCTRREVAHIFRPFIGYKQMRVIHKEPRKTGGEPYVLCFVEFVDEKSALSAL 402
+FV+GLP DCTRREV H+FRPFIGY+++RV+HKEPR++G + VLCFVEFVD K AL+A+
Sbjct: 187 LFVDGLPTDCTRREVGHLFRPFIGYREIRVVHKEPRRSGDKAMVLCFVEFVDPKCALTAM 246
Query: 403 NALQGYKFDASENDSNGLKIQLVHFPGTQP 492
ALQGYKFD + +S L+IQ HFP P
Sbjct: 247 EALQGYKFDDKKPNSLPLRIQFAHFPFRLP 276
>ref|XP_003526036.1| PREDICTED: uncharacterized protein LOC100809186 [Glycine max]
Length = 228
Score = 126 bits (317), Expect = 1e-26
Identities = 65/113 (57%), Positives = 78/113 (69%), Gaps = 6/113 (5%)
Frame = +1
Query: 172 PPSKSPDQLASDTLPCT------IFVEGLPADCTRREVAHIFRPFIGYKQMRVIHKEPRK 333
P SKS + D LP + +FV GLP DCTRREV H+FRPFIGYK +RV+HKEPR+
Sbjct: 104 PASKS----SYDGLPISAADSNILFVGGLPNDCTRREVGHLFRPFIGYKDIRVVHKEPRR 159
Query: 334 TGGEPYVLCFVEFVDEKSALSALNALQGYKFDASENDSNGLKIQLVHFPGTQP 492
+G + LCFVEFVD K AL+A+ ALQGYKFD + DS LKI+ HFP P
Sbjct: 160 SGDKAMTLCFVEFVDSKCALTAMEALQGYKFDDKKPDSPTLKIEFAHFPFRLP 212
>gb|AFK48970.1| unknown [Lotus japonicus]
Length = 229
Score = 126 bits (316), Expect = 1e-26
Identities = 67/125 (53%), Positives = 81/125 (64%)
Frame = +1
Query: 118 TPESVRPDSAPRLAEAVIPPSKSPDQLASDTLPCTIFVEGLPADCTRREVAHIFRPFIGY 297
T V PD + +E IP + S+ L FV+ LP DCTRREV H+FRPFIGY
Sbjct: 104 TSLGVNPDVS---SERPIPKANREGLADSNVL----FVDVLPRDCTRREVGHLFRPFIGY 156
Query: 298 KQMRVIHKEPRKTGGEPYVLCFVEFVDEKSALSALNALQGYKFDASENDSNGLKIQLVHF 477
K +RV+HKEPR++G + VLCFVEF D K AL+A+ ALQGYKFD + DS LKIQ HF
Sbjct: 157 KDIRVVHKEPRRSGDKAMVLCFVEFDDSKCALTAMEALQGYKFDDKKPDSRTLKIQFAHF 216
Query: 478 PGTQP 492
P P
Sbjct: 217 PFRPP 221
>ref|XP_004141330.1| PREDICTED: uncharacterized protein LOC101211987 [Cucumis sativus]
gi|449486681|ref|XP_004157367.1| PREDICTED:
uncharacterized protein LOC101228687 [Cucumis sativus]
Length = 246
Score = 125 bits (313), Expect = 3e-26
Identities = 56/86 (65%), Positives = 69/86 (80%)
Frame = +1
Query: 223 IFVEGLPADCTRREVAHIFRPFIGYKQMRVIHKEPRKTGGEPYVLCFVEFVDEKSALSAL 402
+FV+GLP DCTRREV H+FRPF+GYK +RV+HKEPR+TG + VLCFVEFV+ K + +A+
Sbjct: 150 LFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPRRTGDKAMVLCFVEFVEAKFSQAAM 209
Query: 403 NALQGYKFDASENDSNGLKIQLVHFP 480
ALQGYKFD + DS LKIQ HFP
Sbjct: 210 EALQGYKFDDKKPDSPVLKIQFAHFP 235
>ref|XP_006474441.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform X3
[Citrus sinensis]
Length = 242
Score = 124 bits (312), Expect = 4e-26
Identities = 56/90 (62%), Positives = 70/90 (77%)
Frame = +1
Query: 223 IFVEGLPADCTRREVAHIFRPFIGYKQMRVIHKEPRKTGGEPYVLCFVEFVDEKSALSAL 402
+FV+GLP DCTRREV+H+FRPF+GY+++RVIHKEPR++G VLCFVEF D K A +A+
Sbjct: 143 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRSGDRAMVLCFVEFDDPKCARTAM 202
Query: 403 NALQGYKFDASENDSNGLKIQLVHFPGTQP 492
+AL GYKFD + DS LKIQ HFP P
Sbjct: 203 DALHGYKFDDKKPDSPALKIQFAHFPFRLP 232
>ref|XP_006474439.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform X1
[Citrus sinensis]
Length = 287
Score = 124 bits (312), Expect = 4e-26
Identities = 56/90 (62%), Positives = 70/90 (77%)
Frame = +1
Query: 223 IFVEGLPADCTRREVAHIFRPFIGYKQMRVIHKEPRKTGGEPYVLCFVEFVDEKSALSAL 402
+FV+GLP DCTRREV+H+FRPF+GY+++RVIHKEPR++G VLCFVEF D K A +A+
Sbjct: 188 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRSGDRAMVLCFVEFDDPKCARTAM 247
Query: 403 NALQGYKFDASENDSNGLKIQLVHFPGTQP 492
+AL GYKFD + DS LKIQ HFP P
Sbjct: 248 DALHGYKFDDKKPDSPALKIQFAHFPFRLP 277
>ref|XP_006453055.1| hypothetical protein CICLE_v10009319mg [Citrus clementina]
gi|557556281|gb|ESR66295.1| hypothetical protein
CICLE_v10009319mg [Citrus clementina]
Length = 242
Score = 124 bits (312), Expect = 4e-26
Identities = 56/86 (65%), Positives = 69/86 (80%)
Frame = +1
Query: 223 IFVEGLPADCTRREVAHIFRPFIGYKQMRVIHKEPRKTGGEPYVLCFVEFVDEKSALSAL 402
+FV+GLP DCTRREV+H+FRPF+GY+++RVIHKEPR+TG VLCFVEF D K A +A+
Sbjct: 143 LFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCARTAM 202
Query: 403 NALQGYKFDASENDSNGLKIQLVHFP 480
+AL GYKFD + DS LKIQ HFP
Sbjct: 203 DALYGYKFDDKKPDSPTLKIQFAHFP 228
>ref|NP_001242381.1| uncharacterized protein LOC100816255 [Glycine max]
gi|255647054|gb|ACU23995.1| unknown [Glycine max]
Length = 220
Score = 124 bits (311), Expect = 6e-26
Identities = 65/113 (57%), Positives = 76/113 (67%), Gaps = 6/113 (5%)
Frame = +1
Query: 172 PPSKSPDQLASDTLPCT------IFVEGLPADCTRREVAHIFRPFIGYKQMRVIHKEPRK 333
P SKS + D LP + +FV GLP DCTRREV H+FRPFIGYK +RV+HKEPR+
Sbjct: 103 PASKS----SYDGLPISAADSNILFVGGLPKDCTRREVGHLFRPFIGYKDIRVVHKEPRR 158
Query: 334 TGGEPYVLCFVEFVDEKSALSALNALQGYKFDASENDSNGLKIQLVHFPGTQP 492
+G + LCFVEFVD AL+AL LQGYKFD + DS LKIQ HFP P
Sbjct: 159 SGDKAMTLCFVEFVDSNCALTALETLQGYKFDDKKPDSPTLKIQPAHFPFRLP 211
>gb|ESW08854.1| hypothetical protein PHAVU_009G079800g [Phaseolus vulgaris]
Length = 218
Score = 123 bits (309), Expect = 1e-25
Identities = 58/90 (64%), Positives = 68/90 (75%)
Frame = +1
Query: 223 IFVEGLPADCTRREVAHIFRPFIGYKQMRVIHKEPRKTGGEPYVLCFVEFVDEKSALSAL 402
+FV GLP +CTRREV H+FRPFIGYK +RV+HKEPR++G + LCFVEF+D K AL+AL
Sbjct: 120 LFVGGLPNNCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAVTLCFVEFLDSKCALTAL 179
Query: 403 NALQGYKFDASENDSNGLKIQLVHFPGTQP 492
ALQGYKFD DS LKIQ HFP P
Sbjct: 180 EALQGYKFDDKLPDSPTLKIQFAHFPFRLP 209
>gb|EOY23631.1| RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 233
Score = 123 bits (308), Expect = 1e-25
Identities = 57/110 (51%), Positives = 77/110 (70%)
Frame = +1
Query: 160 EAVIPPSKSPDQLASDTLPCTIFVEGLPADCTRREVAHIFRPFIGYKQMRVIHKEPRKTG 339
EA +PP S T+FVEGLP+DCTRREV+HIFRPF+GYK++R++ KE R G
Sbjct: 125 EAPLPPDASS----------TLFVEGLPSDCTRREVSHIFRPFVGYKEVRLVSKESRHPG 174
Query: 340 GEPYVLCFVEFVDEKSALSALNALQGYKFDASENDSNGLKIQLVHFPGTQ 489
G+P +LCFV+FV A +A++ALQGYKFD + DS L++Q +PG +
Sbjct: 175 GDPLILCFVDFVSPAHAATAMDALQGYKFDEHDRDSVKLRLQFARYPGAR 224
>gb|EOY29962.1| RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 410
Score = 122 bits (307), Expect = 2e-25
Identities = 70/162 (43%), Positives = 91/162 (56%), Gaps = 4/162 (2%)
Frame = +1
Query: 7 ALEPGFSEKPVKANLYSPNEAA----AVKVQDSARMEAITKTPESVRPDSAPRLAEAVIP 174
A+ G S K + L PN V +A+ + P S+R P++
Sbjct: 250 AVSAGASIKGCSSPLEDPNLVGQRQDGTAVMRPGIPDAVDEMPASLRNGDGPQV------ 303
Query: 175 PSKSPDQLASDTLPCTIFVEGLPADCTRREVAHIFRPFIGYKQMRVIHKEPRKTGGEPYV 354
D S+ L FV+GLP DCTRREV H+FRPF+GYK+++VIHKEPR +G V
Sbjct: 304 -----DAGESNIL----FVDGLPTDCTRREVGHLFRPFLGYKEIKVIHKEPRHSGDRAMV 354
Query: 355 LCFVEFVDEKSALSALNALQGYKFDASENDSNGLKIQLVHFP 480
LCFVEF D K A +A+ ALQGYKFD + DS L++Q HFP
Sbjct: 355 LCFVEFHDSKFARAAMQALQGYKFDDKKPDSPALRVQFAHFP 396
>ref|XP_002275189.2| PREDICTED: uncharacterized protein LOC100265772 [Vitis vinifera]
Length = 229
Score = 122 bits (307), Expect = 2e-25
Identities = 53/90 (58%), Positives = 72/90 (80%)
Frame = +1
Query: 220 TIFVEGLPADCTRREVAHIFRPFIGYKQMRVIHKEPRKTGGEPYVLCFVEFVDEKSALSA 399
T+FVEGLPA+CTRREV+HIFRPF+GYK++R++ KE R +GG+P VLCFV+FV A +A
Sbjct: 131 TLFVEGLPANCTRREVSHIFRPFVGYKEVRLVSKESRHSGGDPLVLCFVDFVSPAHAATA 190
Query: 400 LNALQGYKFDASENDSNGLKIQLVHFPGTQ 489
++ALQGYKFD + DS L++Q +PG +
Sbjct: 191 MDALQGYKFDEHDRDSVNLRLQFARYPGAR 220
>ref|XP_003603172.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|355492220|gb|AES73423.1| RNA-binding protein with
multiple splicing [Medicago truncatula]
Length = 229
Score = 122 bits (307), Expect = 2e-25
Identities = 64/152 (42%), Positives = 89/152 (58%), Gaps = 2/152 (1%)
Frame = +1
Query: 43 ANLYSPNEAAAVKVQDSARMEAITKTPESVRPD--SAPRLAEAVIPPSKSPDQLASDTLP 216
A Y+P E + + A + T P+ + + S + +P S + +
Sbjct: 81 ATSYNPLEDVDLSTKRDALLGVSTGVPDPIANNERSISKSNYDALPVSAAESNI------ 134
Query: 217 CTIFVEGLPADCTRREVAHIFRPFIGYKQMRVIHKEPRKTGGEPYVLCFVEFVDEKSALS 396
+FV GLP DCTRREV H+FRPFIGYK ++V+HKEPR++G + + CFVEF + K AL+
Sbjct: 135 --LFVGGLPKDCTRREVGHLFRPFIGYKDIKVVHKEPRRSGDKAMIFCFVEFTEPKCALT 192
Query: 397 ALNALQGYKFDASENDSNGLKIQLVHFPGTQP 492
A+ ALQGYKFD + DS LKI+ HFP P
Sbjct: 193 AMEALQGYKFDDKKPDSPTLKIKFAHFPFRPP 224
>emb|CBI23047.3| unnamed protein product [Vitis vinifera]
Length = 230
Score = 122 bits (307), Expect = 2e-25
Identities = 53/90 (58%), Positives = 72/90 (80%)
Frame = +1
Query: 220 TIFVEGLPADCTRREVAHIFRPFIGYKQMRVIHKEPRKTGGEPYVLCFVEFVDEKSALSA 399
T+FVEGLPA+CTRREV+HIFRPF+GYK++R++ KE R +GG+P VLCFV+FV A +A
Sbjct: 132 TLFVEGLPANCTRREVSHIFRPFVGYKEVRLVSKESRHSGGDPLVLCFVDFVSPAHAATA 191
Query: 400 LNALQGYKFDASENDSNGLKIQLVHFPGTQ 489
++ALQGYKFD + DS L++Q +PG +
Sbjct: 192 MDALQGYKFDEHDRDSVNLRLQFARYPGAR 221
>gb|EMJ19504.1| hypothetical protein PRUPE_ppa010843mg [Prunus persica]
Length = 233
Score = 121 bits (304), Expect = 4e-25
Identities = 57/110 (51%), Positives = 76/110 (69%)
Frame = +1
Query: 160 EAVIPPSKSPDQLASDTLPCTIFVEGLPADCTRREVAHIFRPFIGYKQMRVIHKEPRKTG 339
EA +PP + T+FVEGLP +CTRREVAHIFRPF+GYK++R++ KE R G
Sbjct: 125 EAPLPPGATS----------TLFVEGLPPNCTRREVAHIFRPFVGYKEVRLVSKESRHPG 174
Query: 340 GEPYVLCFVEFVDEKSALSALNALQGYKFDASENDSNGLKIQLVHFPGTQ 489
G+P VLCFV+FV A +A++ALQGYKFD + DS L++Q +PG +
Sbjct: 175 GDPLVLCFVDFVSPAHAATAMDALQGYKFDEHDRDSVNLRLQFARYPGAR 224
>ref|XP_002515833.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223545062|gb|EEF46575.1| nucleic acid binding
protein, putative [Ricinus communis]
Length = 232
Score = 121 bits (304), Expect = 4e-25
Identities = 52/90 (57%), Positives = 72/90 (80%)
Frame = +1
Query: 220 TIFVEGLPADCTRREVAHIFRPFIGYKQMRVIHKEPRKTGGEPYVLCFVEFVDEKSALSA 399
T+FVEGLP+DC+RREVAHIFRPF+GYK++R++ KE R+ GG+P VLCFV+F+ A +A
Sbjct: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRRPGGDPLVLCFVDFLSPAHAATA 193
Query: 400 LNALQGYKFDASENDSNGLKIQLVHFPGTQ 489
++ALQGYKFD + DS L++Q +PG +
Sbjct: 194 MDALQGYKFDEHDRDSVHLRLQFARYPGAR 223
>gb|ABK22075.1| unknown [Picea sitchensis]
Length = 265
Score = 121 bits (303), Expect = 5e-25
Identities = 58/107 (54%), Positives = 76/107 (71%), Gaps = 4/107 (3%)
Frame = +1
Query: 175 PSKSPDQLASDTLPC----TIFVEGLPADCTRREVAHIFRPFIGYKQMRVIHKEPRKTGG 342
P + PD +D LP T+FVEGLP CTRRE AHIFRPF+G+K++R+++KE R GG
Sbjct: 144 PLRRPD---NDHLPPDASNTLFVEGLPPKCTRREAAHIFRPFVGFKEVRLVNKEARNPGG 200
Query: 343 EPYVLCFVEFVDEKSALSALNALQGYKFDASENDSNGLKIQLVHFPG 483
EP VLCFV+F + A +A+ ALQGYKFD +E +S LK+Q +PG
Sbjct: 201 EPLVLCFVDFANPNCAATAMEALQGYKFDENEKESPSLKLQFARYPG 247