BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00020377
         (519 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ESW31380.1| hypothetical protein PHAVU_002G233900g [Phaseolus...    64   3e-08
gb|AEW07845.1| hypothetical protein 0_12933_01, partial [Pinus r...    61   2e-07
gb|AFG45721.1| hypothetical protein 0_12933_01, partial [Pinus t...    60   2e-07
gb|AFG45720.1| hypothetical protein 0_12933_01, partial [Pinus t...    60   2e-07
ref|XP_004516023.1| PREDICTED: pentatricopeptide repeat-containi...    59   7e-07
gb|AFG45729.1| hypothetical protein 0_12933_01, partial [Pinus t...    59   7e-07
ref|XP_002978456.1| hypothetical protein SELMODRAFT_108616 [Sela...    58   1e-06
gb|EOY33969.1| Tetratricopeptide repeat (TPR)-like superfamily p...    58   1e-06
gb|AFG45724.1| hypothetical protein 0_12933_01, partial [Pinus t...    57   2e-06
gb|AFG45722.1| hypothetical protein 0_12933_01, partial [Pinus t...    57   2e-06
ref|XP_006467801.1| PREDICTED: pentatricopeptide repeat-containi...    57   3e-06
ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containi...    56   4e-06
gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygr...    56   6e-06
emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]    56   6e-06
ref|XP_003541534.1| PREDICTED: pentatricopeptide repeat-containi...    55   7e-06
ref|XP_001775099.1| predicted protein [Physcomitrella patens] gi...    55   7e-06
ref|XP_003545972.2| PREDICTED: pentatricopeptide repeat-containi...    55   1e-05
ref|XP_002970294.1| hypothetical protein SELMODRAFT_93439 [Selag...    55   1e-05

>gb|ESW31380.1| hypothetical protein PHAVU_002G233900g [Phaseolus vulgaris]
          Length = 582

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 31/105 (29%), Positives = 61/105 (58%)
 Frame = -1

Query: 324 PKPTRYTNLLNSCKHYESIPCTKLVQAHIIQSGLANRHDLINKLAFLYATLRNPGIAWKI 145
           P    +T+++ +C     +    LVQ+H+  SG  +   +   L   YA  RNP +A K+
Sbjct: 106 PSTYTFTSVIKACADISDLRLGMLVQSHVFVSGYVSDSFVQAALVTFYAKSRNPRVARKV 165

Query: 144 MEKIPSNASVITWSAVICCHVRSGLSQEAINIYNVMRGEASVSPN 10
            +++P   S++ W+++I  + ++GL++EA+ ++N MR E+ V P+
Sbjct: 166 FDEMPQR-SIVAWNSMISGYEQNGLAREAVEVFNKMR-ESGVEPD 208


>gb|AEW07845.1| hypothetical protein 0_12933_01, partial [Pinus radiata]
          Length = 147

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 38/128 (29%), Positives = 65/128 (50%), Gaps = 1/128 (0%)
 Frame = -1

Query: 390 ENLFSNGSIHKDIFQVLCKLKNP-KPTRYTNLLNSCKHYESIPCTKLVQAHIIQSGLANR 214
           +NL + G + KD    L +   P KP+ Y  LL SC    ++P  KL+ AHI +   A  
Sbjct: 13  KNLCNQGQL-KDAVHALQQTSIPVKPSTYAYLLQSCTKKNALPEGKLIHAHINERAPAKD 71

Query: 213 HDLINKLAFLYATLRNPGIAWKIMEKIPSNASVITWSAVICCHVRSGLSQEAINIYNVMR 34
             L N L  +Y   RN   A K+ +++P      +W+ +I  + + G+++EA+ ++  M+
Sbjct: 72  TFLHNSLIMMYVRCRNLTDARKVFDRMPERDD-FSWNVMIAAYTKHGIAEEALRMFYQMQ 130

Query: 33  GEASVSPN 10
               + PN
Sbjct: 131 -RTGIEPN 137


>gb|AFG45721.1| hypothetical protein 0_12933_01, partial [Pinus taeda]
           gi|383130011|gb|AFG45726.1| hypothetical protein
           0_12933_01, partial [Pinus taeda]
           gi|383130015|gb|AFG45730.1| hypothetical protein
           0_12933_01, partial [Pinus taeda]
           gi|383130016|gb|AFG45731.1| hypothetical protein
           0_12933_01, partial [Pinus taeda]
           gi|383130017|gb|AFG45732.1| hypothetical protein
           0_12933_01, partial [Pinus taeda]
           gi|383130019|gb|AFG45734.1| hypothetical protein
           0_12933_01, partial [Pinus taeda]
           gi|383130020|gb|AFG45735.1| hypothetical protein
           0_12933_01, partial [Pinus taeda]
          Length = 147

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 38/128 (29%), Positives = 64/128 (50%), Gaps = 1/128 (0%)
 Frame = -1

Query: 390 ENLFSNGSIHKDIFQVLCKLKNP-KPTRYTNLLNSCKHYESIPCTKLVQAHIIQSGLANR 214
           +NL   G + KD    L +   P KP+ Y  LL SC    ++P  KL+ AHI +   A  
Sbjct: 13  KNLCKQGQL-KDAVHALQQTSIPVKPSTYAYLLQSCTKKNALPEGKLIHAHINERAPATD 71

Query: 213 HDLINKLAFLYATLRNPGIAWKIMEKIPSNASVITWSAVICCHVRSGLSQEAINIYNVMR 34
             L N L  +Y   RN   A K+ +++P      +W+ +I  + + G+++EA+ ++  M+
Sbjct: 72  TFLHNSLIMMYVRCRNLTDARKVFDRMPERDD-FSWNVMIAAYTKHGIAEEALRMFYQMQ 130

Query: 33  GEASVSPN 10
               + PN
Sbjct: 131 -RTGIEPN 137


>gb|AFG45720.1| hypothetical protein 0_12933_01, partial [Pinus taeda]
           gi|383130008|gb|AFG45723.1| hypothetical protein
           0_12933_01, partial [Pinus taeda]
           gi|383130010|gb|AFG45725.1| hypothetical protein
           0_12933_01, partial [Pinus taeda]
           gi|383130012|gb|AFG45727.1| hypothetical protein
           0_12933_01, partial [Pinus taeda]
           gi|383130013|gb|AFG45728.1| hypothetical protein
           0_12933_01, partial [Pinus taeda]
           gi|383130018|gb|AFG45733.1| hypothetical protein
           0_12933_01, partial [Pinus taeda]
          Length = 147

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 38/128 (29%), Positives = 64/128 (50%), Gaps = 1/128 (0%)
 Frame = -1

Query: 390 ENLFSNGSIHKDIFQVLCKLKNP-KPTRYTNLLNSCKHYESIPCTKLVQAHIIQSGLANR 214
           +NL   G + KD    L +   P KP+ Y  LL SC    ++P  KL+ AHI +   A  
Sbjct: 13  KNLCKQGQL-KDAVHALQQTSIPIKPSTYAYLLQSCTKKNALPEGKLIHAHINERAPATD 71

Query: 213 HDLINKLAFLYATLRNPGIAWKIMEKIPSNASVITWSAVICCHVRSGLSQEAINIYNVMR 34
             L N L  +Y   RN   A K+ +++P      +W+ +I  + + G+++EA+ ++  M+
Sbjct: 72  TFLHNSLIMMYVRCRNLTDARKVFDRMPERDD-FSWNVMIAAYTKHGIAEEALRMFYQMQ 130

Query: 33  GEASVSPN 10
               + PN
Sbjct: 131 -RTGIEPN 137


>ref|XP_004516023.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Cicer arietinum]
          Length = 925

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 30/94 (31%), Positives = 53/94 (56%)
 Frame = -1

Query: 318 PTRYTNLLNSCKHYESIPCTKLVQAHIIQSGLANRHDLINKLAFLYATLRNPGIAWKIME 139
           P  Y NLL+ C   +S+     + AH+I+ G ++   L N L  +Y+  R  G A K+ +
Sbjct: 47  PISYNNLLSHCVASKSLNSGMEIHAHMIKFGFSHHPSLRNHLVTIYSKSRRFGYARKLFD 106

Query: 138 KIPSNASVITWSAVICCHVRSGLSQEAINIYNVM 37
           +    + V++WSA+I  +V++G  +EA+  +N M
Sbjct: 107 QSTEPSMVVSWSALISGYVQNGFDKEALLAFNEM 140


>gb|AFG45729.1| hypothetical protein 0_12933_01, partial [Pinus taeda]
          Length = 147

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
 Frame = -1

Query: 390 ENLFSNGSIHKDIFQVLCKLKNP-KPTRYTNLLNSCKHYESIPCTKLVQAHIIQSGLANR 214
           +NL   G + KD    L +   P KP+ Y  LL SC    ++P  KL+ AHI +   A  
Sbjct: 13  KNLCKQGQL-KDAVHALQQTSIPVKPSTYAYLLQSCTKKNALPEGKLIHAHINERAPATD 71

Query: 213 HDLINKLAFLYATLRNPGIAWKIMEKIPSNASVITWSAVICCHVRSGLSQEAINIYNVMR 34
             L N L  +Y   RN   A K+ +++P      +W+ +I  + + G+++E + ++  M+
Sbjct: 72  TFLHNSLIMMYVRCRNLTDARKVFDRMPERDD-FSWNVMIAAYTKHGIAEEGLRMFYQMQ 130

Query: 33  GEASVSPN 10
               + PN
Sbjct: 131 -RTGIEPN 137


>ref|XP_002978456.1| hypothetical protein SELMODRAFT_108616 [Selaginella moellendorffii]
           gi|300153805|gb|EFJ20442.1| hypothetical protein
           SELMODRAFT_108616 [Selaginella moellendorffii]
          Length = 899

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 33/112 (29%), Positives = 57/112 (50%)
 Frame = -1

Query: 369 SIHKDIFQVLCKLKNPKPTRYTNLLNSCKHYESIPCTKLVQAHIIQSGLANRHDLINKLA 190
           S+   I Q+    ++ +P RY +LL  C   +S    KLV  HI+ SG      + N L 
Sbjct: 9   SLQTHINQLKKSSESLQPARYASLLQKCTEQKSAAAGKLVHQHILSSGCGVNRYIQNHLI 68

Query: 189 FLYATLRNPGIAWKIMEKIPSNASVITWSAVICCHVRSGLSQEAINIYNVMR 34
           F+YA       A ++ E +P N +V +W+A+I  + + G  +E + ++  M+
Sbjct: 69  FMYAKCGCLEDALEVFELLP-NPNVFSWTALITAYAKEGHLREVLGLFRKMQ 119


>gb|EOY33969.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           [Theobroma cacao]
          Length = 542

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 34/112 (30%), Positives = 56/112 (50%)
 Frame = -1

Query: 363 HKDIFQVLCKLKNPKPTRYTNLLNSCKHYESIPCTKLVQAHIIQSGLANRHDLINKLAFL 184
           HK    ++ +L       Y NLL       ++   +L+ AH+I +GLA   DL +K    
Sbjct: 9   HKTKITIMHRLSPSFTDAYANLLEIYARDRALKSGRLLHAHLIINGLARLTDLASKFKAF 68

Query: 183 YATLRNPGIAWKIMEKIPSNASVITWSAVICCHVRSGLSQEAINIYNVMRGE 28
           Y        A K+ +KIP   +V  W+++I  + + G  QEAIN+++ M+ E
Sbjct: 69  YTECGQISDARKLFDKIP-KTNVSRWTSIIGAYCQRGYYQEAINVFSEMQAE 119


>gb|AFG45724.1| hypothetical protein 0_12933_01, partial [Pinus taeda]
          Length = 147

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
 Frame = -1

Query: 390 ENLFSNGSIHKDIFQVLCKLKNP-KPTRYTNLLNSCKHYESIPCTKLVQAHIIQSGLANR 214
           +NL   G + KD    L +   P KP+ Y  LL SC    ++P  KL+ AHI +   A  
Sbjct: 13  KNLCKQGQL-KDAVHALQQTSIPVKPSTYAYLLQSCTKKNALPEGKLIHAHINERAPATD 71

Query: 213 HDLINKLAFLYATLRNPGIAWKIMEKIPSNASVITWSAVICCHVRSGLSQEAINIYNVMR 34
             L N L  +Y    N   A K+ +++P      +W+ +I  + + G+++EA+ ++  M+
Sbjct: 72  TFLHNSLIIMYVRCGNLTDARKLFDRMPERDD-FSWNVMIAAYTKHGIAEEALRMFYQMQ 130

Query: 33  GEASVSPN 10
               + PN
Sbjct: 131 -RTGIEPN 137


>gb|AFG45722.1| hypothetical protein 0_12933_01, partial [Pinus taeda]
          Length = 147

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
 Frame = -1

Query: 390 ENLFSNGSIHKDIFQVLCKLKNP-KPTRYTNLLNSCKHYESIPCTKLVQAHIIQSGLANR 214
           +NL   G + KD    L +   P KP+ Y  LL SC    ++P  KL+ AHI +   A  
Sbjct: 13  KNLCKQGQL-KDAVHALQQTSIPVKPSTYAYLLQSCTKKNALPEGKLIHAHINERAPATD 71

Query: 213 HDLINKLAFLYATLRNPGIAWKIMEKIPSNASVITWSAVICCHVRSGLSQEAINIYNVMR 34
             L N L  +Y    N   A K+ +++P      +W+ +I  + + G+++EA+ ++  M+
Sbjct: 72  TFLHNSLIMMYVRCGNLTDARKLFDRMPERDD-FSWNVMIAAYTKHGIAEEALRMFYQMQ 130

Query: 33  GEASVSPN 10
               + PN
Sbjct: 131 -RTGIEPN 137


>ref|XP_006467801.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33760-like [Citrus sinensis]
          Length = 580

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 36/132 (27%), Positives = 69/132 (52%), Gaps = 2/132 (1%)
 Frame = -1

Query: 399 KNQENLFSNGSIHKDIFQVLCKLKNPKPTRYT--NLLNSCKHYESIPCTKLVQAHIIQSG 226
           +N +  FS  S+   +F     + N  P+ YT   ++ SC H   +   + V  H+  SG
Sbjct: 80  RNSKANFSTDSL---LFYRRMIVSNISPSNYTFSAVIKSCAHLSILNLGRAVHCHVFVSG 136

Query: 225 LANRHDLINKLAFLYATLRNPGIAWKIMEKIPSNASVITWSAVICCHVRSGLSQEAINIY 46
             +   +   L   YA   N  +A K+ +++P   SV+ W+++I  + ++G ++EAI ++
Sbjct: 137 YDSDLHVQAALVNFYAKSNNVDVARKVFDRMPDK-SVVAWNSMISGYEQNGFAKEAIGLF 195

Query: 45  NVMRGEASVSPN 10
           N+MR +  V+P+
Sbjct: 196 NLMR-DFGVNPD 206


>ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
           [Vitis vinifera] gi|296082987|emb|CBI22288.3| unnamed
           protein product [Vitis vinifera]
          Length = 676

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 5/106 (4%)
 Frame = -1

Query: 348 QVLCKLKN--PKPTRYTNLLNSCKHYESIPCTKLVQAHIIQSGLAN---RHDLINKLAFL 184
           Q L K K+      RY +LL  C   +SIP TK + AH I  GL +    H L++ LA  
Sbjct: 6   QALSKSKHLLTATARYQSLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAA 65

Query: 183 YATLRNPGIAWKIMEKIPSNASVITWSAVICCHVRSGLSQEAINIY 46
           YA       A K+ +++  N S+ +W+A+I  +  SGLS +A+ ++
Sbjct: 66  YAMFGCAPHARKLFDEL-RNPSLFSWNAMIRMYTNSGLSYDALGLF 110


>gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
          Length = 820

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 31/94 (32%), Positives = 50/94 (53%)
 Frame = -1

Query: 309 YTNLLNSCKHYESIPCTKLVQAHIIQSGLANRHDLINKLAFLYATLRNPGIAWKIMEKIP 130
           Y  LL SC   + +   K V  HI++ G+     +IN L  LY    +   A ++ +K  
Sbjct: 47  YVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLFDKF- 105

Query: 129 SNASVITWSAVICCHVRSGLSQEAINIYNVMRGE 28
           SN SV++W+ +I  +   GL QEA N++ +M+ E
Sbjct: 106 SNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQE 139


>emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
          Length = 676

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 5/106 (4%)
 Frame = -1

Query: 348 QVLCKLKN--PKPTRYTNLLNSCKHYESIPCTKLVQAHIIQSGLAN---RHDLINKLAFL 184
           Q L K K+      RY +LL  C   +SIP TK + AH I  GL +    H L++ LA  
Sbjct: 6   QALSKSKHLLTATARYQSLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAA 65

Query: 183 YATLRNPGIAWKIMEKIPSNASVITWSAVICCHVRSGLSQEAINIY 46
           YA       A K+ +++  N S+ +W+A+I  +  SGLS +A+ ++
Sbjct: 66  YAMCGCAPHARKLFDEL-RNPSLFSWNAMIRMYTNSGLSYDALGLF 110


>ref|XP_003541534.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33760-like [Glycine max]
          Length = 582

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 29/105 (27%), Positives = 58/105 (55%)
 Frame = -1

Query: 324 PKPTRYTNLLNSCKHYESIPCTKLVQAHIIQSGLANRHDLINKLAFLYATLRNPGIAWKI 145
           P    +T+++ +C     +    LV +H+  SG A+   +   L   YA    P +A K+
Sbjct: 106 PSTYTFTSVIKACADLSLLCIGTLVHSHVFVSGYASDSFVQAALIAFYAKSCTPRVARKV 165

Query: 144 MEKIPSNASVITWSAVICCHVRSGLSQEAINIYNVMRGEASVSPN 10
            +++P   S++ W+++I  + ++GL+ EA+ ++N MR E+ V P+
Sbjct: 166 FDEMPQR-SIVAWNSMISGYEQNGLANEAVEVFNKMR-ESRVEPD 208


>ref|XP_001775099.1| predicted protein [Physcomitrella patens]
           gi|162673550|gb|EDQ60071.1| predicted protein
           [Physcomitrella patens]
          Length = 804

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 31/94 (32%), Positives = 51/94 (54%)
 Frame = -1

Query: 309 YTNLLNSCKHYESIPCTKLVQAHIIQSGLANRHDLINKLAFLYATLRNPGIAWKIMEKIP 130
           Y  LL SC   + +   K V  HI++ G+     + N L  LYA   +   A ++ +K  
Sbjct: 31  YVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQLFDKF- 89

Query: 129 SNASVITWSAVICCHVRSGLSQEAINIYNVMRGE 28
           SN SV++W+ +I  +   GL+QEA N++ +M+ E
Sbjct: 90  SNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQE 123


>ref|XP_003545972.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 930

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 29/94 (30%), Positives = 54/94 (57%)
 Frame = -1

Query: 318 PTRYTNLLNSCKHYESIPCTKLVQAHIIQSGLANRHDLINKLAFLYATLRNPGIAWKIME 139
           P  Y+ LL+ C   +S+     + AH+I+ G +    L N L  LY+  R  G A K+++
Sbjct: 53  PISYSKLLSQCVASKSLTSGMELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVD 112

Query: 138 KIPSNASVITWSAVICCHVRSGLSQEAINIYNVM 37
           +  S   V++WS+++  +V++G  +EA+ ++N M
Sbjct: 113 E-SSELDVVSWSSLLSGYVQNGFVEEALLVFNEM 145


>ref|XP_002970294.1| hypothetical protein SELMODRAFT_93439 [Selaginella moellendorffii]
           gi|300161810|gb|EFJ28424.1| hypothetical protein
           SELMODRAFT_93439 [Selaginella moellendorffii]
          Length = 1096

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 33/112 (29%), Positives = 55/112 (49%)
 Frame = -1

Query: 369 SIHKDIFQVLCKLKNPKPTRYTNLLNSCKHYESIPCTKLVQAHIIQSGLANRHDLINKLA 190
           S+   I Q+    ++ +P RY +LL  C   +S    KLV  HI+ SG      L N L 
Sbjct: 9   SLQTHINQLKKSSESLQPARYASLLQKCAEQKSAAAGKLVHQHILSSGCGVNRYLQNHLI 68

Query: 189 FLYATLRNPGIAWKIMEKIPSNASVITWSAVICCHVRSGLSQEAINIYNVMR 34
           F+YA       A ++ E +P   +V +W+A+I  + + G  +E +  +  M+
Sbjct: 69  FMYAKCGCLQDAVEVFELLPC-PNVFSWTALITAYAKEGHLREVLGFFRKMQ 119