BLASTX nr result
ID: Ephedra28_contig00020315
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00020315
(683 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002321639.2| pentatricopeptide repeat-containing family p... 162 1e-37
ref|XP_002511313.1| pentatricopeptide repeat-containing protein,... 150 3e-34
ref|XP_006439927.1| hypothetical protein CICLE_v10019266mg [Citr... 149 1e-33
ref|XP_006476892.1| PREDICTED: pentatricopeptide repeat-containi... 147 4e-33
ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containi... 147 4e-33
gb|EXB93901.1| hypothetical protein L484_002057 [Morus notabilis] 146 7e-33
ref|XP_006852369.1| hypothetical protein AMTR_s00049p00223850 [A... 144 3e-32
ref|XP_004515865.1| PREDICTED: pentatricopeptide repeat-containi... 142 7e-32
gb|EMJ11699.1| hypothetical protein PRUPE_ppa002676mg [Prunus pe... 142 1e-31
ref|NP_190408.1| pentatricopeptide repeat-containing protein [Ar... 142 1e-31
ref|XP_002877605.1| pentatricopeptide repeat-containing protein ... 141 2e-31
ref|XP_006290749.1| hypothetical protein CARUB_v10016848mg [Caps... 138 2e-30
ref|XP_006404282.1| hypothetical protein EUTSA_v10010209mg [Eutr... 137 3e-30
ref|XP_004515902.1| PREDICTED: pentatricopeptide repeat-containi... 135 9e-30
ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containi... 134 2e-29
ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containi... 133 4e-29
gb|ESW27478.1| hypothetical protein PHAVU_003G205300g [Phaseolus... 132 1e-28
ref|XP_004236267.1| PREDICTED: pentatricopeptide repeat-containi... 131 2e-28
ref|XP_003549820.1| PREDICTED: pentatricopeptide repeat-containi... 131 2e-28
ref|XP_004299145.1| PREDICTED: pentatricopeptide repeat-containi... 128 2e-27
>ref|XP_002321639.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550322390|gb|EEF05766.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 486
Score = 162 bits (409), Expect = 1e-37
Identities = 81/228 (35%), Positives = 134/228 (58%), Gaps = 3/228 (1%)
Frame = +2
Query: 8 AKVEEKNQVLSILKAKDWGSETEEKLNGLTDISVDHVVSALTNQ---NPVKALSFFDCYK 178
AK V+ I+ ++W E E+KL G+ + D+ V + + PVKAL FF
Sbjct: 54 AKDNVVKDVVRIILEREWNKEVEKKLVGMRIVLTDNFVIRVLKELRSYPVKALRFFQWVD 113
Query: 179 KHPSYKPSSPVYNAMLRAVSKKTHMAKFWELAEEMKSHGFLMEKHTYLLIKGRLRKDGTS 358
+ Y+ ++ YNA++R + + + +FW + +EMK+ G+ M+ TY+ I + +K
Sbjct: 114 RREGYQHNTVTYNALVRVLGRDDSIGEFWSVVDEMKNAGYEMDIDTYIKISRQFQKIKLM 173
Query: 359 EESAKVFIWMTENCQEVPTAQTCYDVIRFMANEDIPDIDAATRVLEAYKNCGGSMDKSVY 538
E++ +++ +M + + P+ Q CY ++R +A D PD+D +RV++ YK G S+ KSVY
Sbjct: 174 EDAVRLYEFMMDGPFK-PSVQDCYILLRSVAASDNPDLDLVSRVVDGYKATGNSLSKSVY 232
Query: 539 DSLQRCLTRAGLVDEAMKLMDTMTKEGFAPDNVTYGQLIFGLCRANRL 682
D + R T AG DEA K++ M G+ PDN+TY QL+FGLC++ RL
Sbjct: 233 DGMHRSFTSAGKFDEAEKIVKAMRDAGYEPDNITYSQLVFGLCKSKRL 280
>ref|XP_002511313.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223550428|gb|EEF51915.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 627
Score = 150 bits (380), Expect = 3e-34
Identities = 81/221 (36%), Positives = 131/221 (59%), Gaps = 4/221 (1%)
Frame = +2
Query: 32 VLSILKAKDWGSETEEKLNG----LTDISVDHVVSALTNQNPVKALSFFDCYKKHPSYKP 199
V+S++ A +W +E E++L G LTD V V+ L N P+KAL FF+ K Y+
Sbjct: 203 VVSVVSATEWSNEVEKELEGMGILLTDNFVIRVLKELRNY-PLKALQFFNWAGKCERYEC 261
Query: 200 SSPVYNAMLRAVSKKTHMAKFWELAEEMKSHGFLMEKHTYLLIKGRLRKDGTSEESAKVF 379
++ YNA+ R + + + +FW + EEMK+ G M+ TY+ I + +K+ ++ K++
Sbjct: 262 NTITYNAIARVLGRDDSIGEFWSVVEEMKNAGHEMDIDTYIKISRQFQKNKLMGDAVKLY 321
Query: 380 IWMTENCQEVPTAQTCYDVIRFMANEDIPDIDAATRVLEAYKNCGGSMDKSVYDSLQRCL 559
+M + + P+ Q C ++R ++ + PD++ RV+ Y+ G S+ K+VYD + R L
Sbjct: 322 EFMMDGPFK-PSVQDCSMLLRSISASNYPDLNLVFRVVNKYEATGNSLSKAVYDGIHRSL 380
Query: 560 TRAGLVDEAMKLMDTMTKEGFAPDNVTYGQLIFGLCRANRL 682
T G DEA K+M M G+ PDN+TY QL+FGLC+A RL
Sbjct: 381 TSIGNFDEAAKMMKCMQTAGYEPDNITYSQLVFGLCKARRL 421
Score = 72.4 bits (176), Expect = 1e-10
Identities = 41/112 (36%), Positives = 61/112 (54%), Gaps = 4/112 (3%)
Frame = +2
Query: 26 NQVLSILKAKDWGSETEEKLNG----LTDISVDHVVSALTNQNPVKALSFFDCYKKHPSY 193
+ ++ +L DW E E +L LT +V +V+ L +++P KA FF+ +
Sbjct: 64 SSLVELLSVNDWSPELETQLENSSPLLTHETVIYVLKKL-DKDPHKAWDFFNWVCDRNGF 122
Query: 194 KPSSPVYNAMLRAVSKKTHMAKFWELAEEMKSHGFLMEKHTYLLIKGRLRKD 349
KPSSP+Y+ MLR + KK M FW +MK GF ++ TYL I G RK+
Sbjct: 123 KPSSPLYSLMLRILVKKDSMKNFWITLRKMKEQGFYTDEETYLTILGVFRKE 174
>ref|XP_006439927.1| hypothetical protein CICLE_v10019266mg [Citrus clementina]
gi|557542189|gb|ESR53167.1| hypothetical protein
CICLE_v10019266mg [Citrus clementina]
Length = 639
Score = 149 bits (375), Expect = 1e-33
Identities = 78/219 (35%), Positives = 127/219 (57%), Gaps = 3/219 (1%)
Frame = +2
Query: 32 VLSILKAKDWGSETEEKLNGLT-DISVDHVVSALTNQN--PVKALSFFDCYKKHPSYKPS 202
++ ++ DW + +KL + ++S + V++ L PVKAL FF +H YK +
Sbjct: 206 LVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHN 265
Query: 203 SPVYNAMLRAVSKKTHMAKFWELAEEMKSHGFLMEKHTYLLIKGRLRKDGTSEESAKVFI 382
+ YN +LR +++ + FW + EEMK G+ M+ TY+ I + +K E++ K+F
Sbjct: 266 TITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRIMEDAVKLFE 325
Query: 383 WMTENCQEVPTAQTCYDVIRFMANEDIPDIDAATRVLEAYKNCGGSMDKSVYDSLQRCLT 562
+M + + P+ Q C ++R +++ + PD+ RV Y++ G S+ KSVYD + R LT
Sbjct: 326 FMMDGPYK-PSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
Query: 563 RAGLVDEAMKLMDTMTKEGFAPDNVTYGQLIFGLCRANR 679
+ G DEA K+M M GF PDN+TY Q+IFGLC+A R
Sbjct: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
Score = 68.2 bits (165), Expect = 2e-09
Identities = 61/239 (25%), Positives = 98/239 (41%), Gaps = 33/239 (13%)
Frame = +2
Query: 26 NQVLSILKAKDWGSETEEKLNGL----TDISVDHVVSALTNQNPVKALSFFDCYKKHPSY 193
N L ++ A DW E E KL L T SV +V+ L N +P KA +FF+ +
Sbjct: 67 NSSLELILACDWSDELENKLEELSPKLTHESVVYVLRKLDN-DPEKASAFFNWVCDKKQF 125
Query: 194 KPSSPVYNAMLRAVSKKTHMAKFWELAEEMKSHGFLMEKHTYLLIKGRLRKDGTSEESAK 373
+PSS VY+ MLR + K + +FW MK +E+ TYL I G L+K + + A
Sbjct: 126 RPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAA 185
Query: 374 VFIWMTENCQEVPTAQTCYDVIRFMANEDIPD-----------------IDAATRVLEAY 502
+ + +E+ ++ + D D + + L Y
Sbjct: 186 LNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIY 245
Query: 503 ------------KNCGGSMDKSVYDSLQRCLTRAGLVDEAMKLMDTMTKEGFAPDNVTY 643
++ G + Y+ + R L R V + +++ M KEG+ D TY
Sbjct: 246 PVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY 304
>ref|XP_006476892.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Citrus sinensis]
Length = 639
Score = 147 bits (370), Expect = 4e-33
Identities = 77/217 (35%), Positives = 126/217 (58%), Gaps = 3/217 (1%)
Frame = +2
Query: 32 VLSILKAKDWGSETEEKLNGLT-DISVDHVVSALTNQN--PVKALSFFDCYKKHPSYKPS 202
++ ++ DW + +KL + ++S + V++ L PVKAL FF +H YK +
Sbjct: 206 LVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHN 265
Query: 203 SPVYNAMLRAVSKKTHMAKFWELAEEMKSHGFLMEKHTYLLIKGRLRKDGTSEESAKVFI 382
+ YN +LR +++ + FW + EEMK G+ M+ TY+ I + +K E++ K+F
Sbjct: 266 TITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFE 325
Query: 383 WMTENCQEVPTAQTCYDVIRFMANEDIPDIDAATRVLEAYKNCGGSMDKSVYDSLQRCLT 562
+M + + P+ Q C ++R +++ + PD+ RV Y++ G S+ KSVYD + R LT
Sbjct: 326 FMMDGPYK-PSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
Query: 563 RAGLVDEAMKLMDTMTKEGFAPDNVTYGQLIFGLCRA 673
+ G DEA K+M M GF PDN+TY Q+IFGLC+A
Sbjct: 385 KLGRFDEAEKIMKAMKNAGFEPDNITYSQVIFGLCKA 421
Score = 67.0 bits (162), Expect = 5e-09
Identities = 60/239 (25%), Positives = 99/239 (41%), Gaps = 33/239 (13%)
Frame = +2
Query: 26 NQVLSILKAKDWGSETEEKLNGL----TDISVDHVVSALTNQNPVKALSFFDCYKKHPSY 193
N L ++ A DW E E KL L T SV +V+ L +++P KA +FF+ +
Sbjct: 67 NSSLELILACDWSDELENKLEELSPKLTHESVVYVLRKL-DKDPQKASAFFNWVCDKKQF 125
Query: 194 KPSSPVYNAMLRAVSKKTHMAKFWELAEEMKSHGFLMEKHTYLLIKGRLRKDGTSEESAK 373
+PSS VY+ MLR + K + +FW MK +E+ TYL I G L+K + + A
Sbjct: 126 RPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAA 185
Query: 374 VFIWMTENCQEVPTAQTCYDVIRFMANEDIPD-----------------IDAATRVLEAY 502
+ + +E+ ++ + D D + + L Y
Sbjct: 186 LNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIY 245
Query: 503 ------------KNCGGSMDKSVYDSLQRCLTRAGLVDEAMKLMDTMTKEGFAPDNVTY 643
++ G + Y+ + R L R V + +++ M KEG+ D TY
Sbjct: 246 PVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY 304
>ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Vitis vinifera]
Length = 631
Score = 147 bits (370), Expect = 4e-33
Identities = 82/226 (36%), Positives = 127/226 (56%), Gaps = 4/226 (1%)
Frame = +2
Query: 17 EEKNQVLSILKAKDWGSETEEKL----NGLTDISVDHVVSALTNQNPVKALSFFDCYKKH 184
E +V+ ++ W SE E+KL N +D V HV+ L P+KAL FF +
Sbjct: 200 EVVKKVVELVTMSVWSSEVEKKLGELKNSFSDNFVLHVLRELRGY-PLKALRFFQWVGEC 258
Query: 185 PSYKPSSPVYNAMLRAVSKKTHMAKFWELAEEMKSHGFLMEKHTYLLIKGRLRKDGTSEE 364
P Y+ SS YN + R + + + +FW + EEMKS G M+ TY+ I + +K+ E+
Sbjct: 259 PGYEHSSITYNVIARVLGRDDSIGEFWSMVEEMKSKGHEMDIDTYIKISRQFQKNKMLED 318
Query: 365 SAKVFIWMTENCQEVPTAQTCYDVIRFMANEDIPDIDAATRVLEAYKNCGGSMDKSVYDS 544
+ K++ M + + P+ Q C ++R ++ PD+ RV E Y+ G S+ K+VYD
Sbjct: 319 AVKLYEIMMDGPYK-PSVQDCTMLLRSISLSSNPDLALVFRVTEKYEAVGNSLCKAVYDG 377
Query: 545 LQRCLTRAGLVDEAMKLMDTMTKEGFAPDNVTYGQLIFGLCRANRL 682
+ R LT G DEA K+M++M G PDN+TY QL++GLC+A +L
Sbjct: 378 IHRSLTSVGRFDEAGKIMESMRSAGCEPDNITYSQLVYGLCKARKL 423
Score = 64.7 bits (156), Expect = 3e-08
Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 4/131 (3%)
Frame = +2
Query: 26 NQVLSILKAKDWGSETEEKLNG----LTDISVDHVVSALTNQNPVKALSFFDCYKKHPSY 193
N ++ ++ DW E E +L LT +V +V+ L +++P + +FF+ + +
Sbjct: 66 NSIVELVLENDWSDELESELEKSSSVLTHETVIYVLKKL-DKDPQRTWNFFNWVTEKNGF 124
Query: 194 KPSSPVYNAMLRAVSKKTHMAKFWELAEEMKSHGFLMEKHTYLLIKGRLRKDGTSEESAK 373
+PSS +Y+ +LR++ M +FW +MK GF ++K TYL I G +K + E
Sbjct: 125 RPSSAMYSLILRSLVHGESMKQFWVTIRKMKEQGFCIDKETYLTILGVFKKGKMASEEVA 184
Query: 374 VFIWMTENCQE 406
+ + QE
Sbjct: 185 LTHFYNRMVQE 195
>gb|EXB93901.1| hypothetical protein L484_002057 [Morus notabilis]
Length = 628
Score = 146 bits (368), Expect = 7e-33
Identities = 79/221 (35%), Positives = 127/221 (57%), Gaps = 3/221 (1%)
Frame = +2
Query: 29 QVLSILKAKDWGSETEEKLNGL-TDISVDHVVSALTNQN--PVKALSFFDCYKKHPSYKP 199
+V+ ++ W E E++L + D+S + V+ L P KA SFF ++P Y+
Sbjct: 203 KVVDVVLGLQWSDEVEKQLGKIIVDLSDNIVLRVLKGLRTYPSKASSFFRWVGRYPGYEH 262
Query: 200 SSPVYNAMLRAVSKKTHMAKFWELAEEMKSHGFLMEKHTYLLIKGRLRKDGTSEESAKVF 379
+S YNA R +S+ + +FW + EEMK G+ ++ Y+ I + +K E+S K++
Sbjct: 263 NSVTYNAAARVLSRDDSIGEFWGMIEEMKGAGYDLDIDNYIKISRQFQKSKMMEDSVKLY 322
Query: 380 IWMTENCQEVPTAQTCYDVIRFMANEDIPDIDAATRVLEAYKNCGGSMDKSVYDSLQRCL 559
+M + + P+AQ C ++R ++ D PD A RV + Y++ G ++ K+ YD + R L
Sbjct: 323 EFMMDGPFK-PSAQDCNLLLRSISAGDNPDCSLAFRVAKKYESTGRTLSKAAYDGIHRSL 381
Query: 560 TRAGLVDEAMKLMDTMTKEGFAPDNVTYGQLIFGLCRANRL 682
T AG DEA K+M M G+ PDN+TY QL+FGLC+A RL
Sbjct: 382 TSAGRFDEAEKMMKVMRNAGYEPDNITYSQLVFGLCKARRL 422
Score = 58.2 bits (139), Expect = 2e-06
Identities = 36/112 (32%), Positives = 62/112 (55%), Gaps = 4/112 (3%)
Frame = +2
Query: 26 NQVLSILKAKDWGSETEEKLN----GLTDISVDHVVSALTNQNPVKALSFFDCYKKHPSY 193
N V+ ++ A +W +E E +L+ G T V +V+ L ++NP KA FF+ + +
Sbjct: 66 NSVVELVLANEWSTELENELDDSNLGWTHERVIYVLKKL-DKNPQKASVFFNWVSQKDGF 124
Query: 194 KPSSPVYNAMLRAVSKKTHMAKFWELAEEMKSHGFLMEKHTYLLIKGRLRKD 349
+PSS +Y+ MLR + K M +FW +MK F +++ T+ I +L K+
Sbjct: 125 RPSSLLYSLMLRILVLK-DMKRFWATLAKMKEQSFYIDEETFDSILAQLVKE 175
>ref|XP_006852369.1| hypothetical protein AMTR_s00049p00223850 [Amborella trichopoda]
gi|548855973|gb|ERN13836.1| hypothetical protein
AMTR_s00049p00223850 [Amborella trichopoda]
Length = 570
Score = 144 bits (362), Expect = 3e-32
Identities = 73/222 (32%), Positives = 130/222 (58%), Gaps = 4/222 (1%)
Frame = +2
Query: 26 NQVLSILKAKDWGSETEEKLNGL----TDISVDHVVSALTNQNPVKALSFFDCYKKHPSY 193
N+ + +L +W E + KL+ L +D ++ V+ + +P+KAL F+ P++
Sbjct: 145 NEAIKLLVDSEWNEEVKCKLSSLGLPLSDSTILRVLEEI-RVDPLKALDFYRWVGGQPNF 203
Query: 194 KPSSPVYNAMLRAVSKKTHMAKFWELAEEMKSHGFLMEKHTYLLIKGRLRKDGTSEESAK 373
+ S+ YN+++R + + + +FW + +EMK GF M+ +Y+ + R +K +E+ +
Sbjct: 204 RHSAITYNSIIRVLGRNDSVKEFWAMVKEMKESGFDMDMDSYVKLSRRFQKWNMLKEAVE 263
Query: 374 VFIWMTENCQEVPTAQTCYDVIRFMANEDIPDIDAATRVLEAYKNCGGSMDKSVYDSLQR 553
++ +M+E + P+ Q C ++R +A P D RV++ ++ G S+ KS+YD + R
Sbjct: 264 LYEFMSEGPYQ-PSVQHCGLLLRKLATSGNPGPDLVFRVVKKFEGAGNSLTKSIYDGIHR 322
Query: 554 CLTRAGLVDEAMKLMDTMTKEGFAPDNVTYGQLIFGLCRANR 679
LT G DEA +++ M K GF PDN+TY QLIFGLC+A+R
Sbjct: 323 SLTSMGRFDEAQNILEAMEKAGFIPDNITYSQLIFGLCKAHR 364
Score = 63.5 bits (153), Expect = 6e-08
Identities = 61/240 (25%), Positives = 100/240 (41%), Gaps = 33/240 (13%)
Frame = +2
Query: 32 VLSILKAKDWGSETEEKLNGL----TDISVDHVVSALTNQNPVKALSFFDCYKKHPSYKP 199
V ++ K W E E +LN L TD V V+ L ++P +L FF + KP
Sbjct: 10 VTKLVSQKGWCEEIENQLNKLNLKLTDEGVLFVLKEL-EKSPRNSLGFFKWVCDKMALKP 68
Query: 200 SSPVYNAMLRAVSKKTHMAKFWELAEEMKSHGFLMEKHTYLLIKGRLRKDGTSEESAKVF 379
SS YN MLR + K M FW + +M+ G ++K TY + GR K+ E++ +
Sbjct: 69 SSVAYNLMLRILGVKDSMKDFWWVMNKMREVGHEIDKETYPTLLGRFVKEKMVIEASSLR 128
Query: 380 IWMTENCQEVPTAQTCYDVIRFMANED-------------IPDIDAA------------T 484
+ +E T + I+ + + + +P D+
Sbjct: 129 ELFSLRQRETHTNSLLNEAIKLLVDSEWNEEVKCKLSSLGLPLSDSTILRVLEEIRVDPL 188
Query: 485 RVLEAYKNCGGSMD----KSVYDSLQRCLTRAGLVDEAMKLMDTMTKEGFAPDNVTYGQL 652
+ L+ Y+ GG + Y+S+ R L R V E ++ M + GF D +Y +L
Sbjct: 189 KALDFYRWVGGQPNFRHSAITYNSIIRVLGRNDSVKEFWAMVKEMKESGFDMDMDSYVKL 248
>ref|XP_004515865.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Cicer arietinum]
Length = 641
Score = 142 bits (359), Expect = 7e-32
Identities = 80/220 (36%), Positives = 127/220 (57%), Gaps = 4/220 (1%)
Frame = +2
Query: 32 VLSILKAKDWGSETEEKLNGL----TDISVDHVVSALTNQNPVKALSFFDCYKKHPSYKP 199
V+ I+ +W + E KL+ L +D V V+ L N P+KA FF K SY+
Sbjct: 206 VVGIVSGSEWDDKVENKLSELKIKLSDNFVIRVLKELRNC-PLKAYKFFQWVGKQSSYQL 264
Query: 200 SSPVYNAMLRAVSKKTHMAKFWELAEEMKSHGFLMEKHTYLLIKGRLRKDGTSEESAKVF 379
++ YNA+ R ++K + +FW + EEMKS G ++ TY+ I +L+K+ E++ K++
Sbjct: 265 NTVTYNAVARVLAKMDSIEEFWSILEEMKSVGHQLDLDTYIKISRQLQKNRMMEDAVKLY 324
Query: 380 IWMTENCQEVPTAQTCYDVIRFMANEDIPDIDAATRVLEAYKNCGGSMDKSVYDSLQRCL 559
M ++ + PT C ++R ++ D P+ID RV + +++ G ++ K VYDS+ R L
Sbjct: 325 ELMMDSLYK-PTVVDCVVLLRTISASDKPNIDLVFRVAKKFESTGYTISKVVYDSIHRSL 383
Query: 560 TRAGLVDEAMKLMDTMTKEGFAPDNVTYGQLIFGLCRANR 679
T AG DEA K++ TM G+ DN+TY Q IFGLC+ R
Sbjct: 384 TSAGKFDEAEKMVQTMKNAGYELDNITYSQTIFGLCKFRR 423
Score = 65.9 bits (159), Expect = 1e-08
Identities = 51/239 (21%), Positives = 102/239 (42%), Gaps = 33/239 (13%)
Frame = +2
Query: 26 NQVLSILKAKDWGSETEEKL----NGLTDISVDHVVSALTNQNPVKALSFFDCYKKHPSY 193
+ +L ++ + DW + E +L + LT +V +V+ L ++NP KA SFF+ K +
Sbjct: 67 HSILELVYSNDWSQDLEHELENCRSSLTHETVVYVLKRL-DKNPEKAFSFFNWVSKKEWF 125
Query: 194 KPSSPVYNAMLRAVSKKTHMAKFWELAEEMKSHGFLMEKHTYLLIKGRLRKDGTSEESAK 373
SS VY+ ++R ++ + M +FW MK GF +++ TYL I +K + +
Sbjct: 126 MASSSVYSLIIRVLANQETMKQFWITLRTMKEKGFYLDEETYLTISVGFKKQKMNSDVVA 185
Query: 374 VFIWMTENCQEVPTAQTCYDVIRFMANEDIPD--------------IDAATRVLEAYKNC 511
+ + ++ +V+ ++ + D + RVL+ +NC
Sbjct: 186 LSHFYDGMIKQNAMQSVVTNVVGIVSGSEWDDKVENKLSELKIKLSDNFVIRVLKELRNC 245
Query: 512 ---------------GGSMDKSVYDSLQRCLTRAGLVDEAMKLMDTMTKEGFAPDNVTY 643
++ Y+++ R L + ++E +++ M G D TY
Sbjct: 246 PLKAYKFFQWVGKQSSYQLNTVTYNAVARVLAKMDSIEEFWSILEEMKSVGHQLDLDTY 304
>gb|EMJ11699.1| hypothetical protein PRUPE_ppa002676mg [Prunus persica]
Length = 646
Score = 142 bits (358), Expect = 1e-31
Identities = 77/225 (34%), Positives = 127/225 (56%), Gaps = 3/225 (1%)
Frame = +2
Query: 17 EEKNQVLSILKAKDWGSETEEKLNGLT-DISVDHVVSALTNQN--PVKALSFFDCYKKHP 187
E +V ++ +W + E++L L +S + VV L P KALSFF +
Sbjct: 217 EVAKKVADVVSGSEWSAGIEKELGELKITLSDNFVVRVLKELRICPSKALSFFHWVGQSS 276
Query: 188 SYKPSSPVYNAMLRAVSKKTHMAKFWELAEEMKSHGFLMEKHTYLLIKGRLRKDGTSEES 367
Y+ ++ YNA+ R +++ + +FW + EEMK G ++ TY+ I + +K E++
Sbjct: 277 GYEHNTITYNAVARILAQADSIGEFWSVIEEMKGAGHELDLDTYIKITRQFQKSKMMEDA 336
Query: 368 AKVFIWMTENCQEVPTAQTCYDVIRFMANEDIPDIDAATRVLEAYKNCGGSMDKSVYDSL 547
K++ M + + P+AQ C ++R ++ D PD+D RV + +++ G ++ K+VYD +
Sbjct: 337 VKLYELMMDGPYK-PSAQDCSMLLRSISANDKPDLDMVFRVAKKFESAGNTLSKAVYDGI 395
Query: 548 QRCLTRAGLVDEAMKLMDTMTKEGFAPDNVTYGQLIFGLCRANRL 682
R LT AG DEA K+ M G+ PDN+TY QL+FGLC+A RL
Sbjct: 396 HRSLTSAGSFDEAEKITKVMRNAGYEPDNITYSQLVFGLCKAKRL 440
Score = 69.3 bits (168), Expect = 1e-09
Identities = 41/111 (36%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Frame = +2
Query: 26 NQVLSILKAKDWGSETEEKLN----GLTDISVDHVVSALTNQNPVKALSFFDCYKKHPSY 193
N VL ++ A W +E E +L+ LT +V +V+ L +++P KA FF+ + +
Sbjct: 83 NSVLQLVLANQWSAELENELSESYPSLTHDAVIYVLKKL-DKDPKKAWDFFNWVCEKNGF 141
Query: 194 KPSSPVYNAMLRAVSKKTHMAKFWELAEEMKSHGFLMEKHTYLLIKGRLRK 346
KPSS V+N ML + K M +FW +MK GF +E TY I RL+K
Sbjct: 142 KPSSLVFNLMLGVLGHKDSMKQFWITLRQMKEQGFYIEVQTYSAIAERLKK 192
>ref|NP_190408.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207690|sp|Q9STK5.1|PP269_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g48250, chloroplastic; Flags: Precursor
gi|4678363|emb|CAB41173.1| putative protein [Arabidopsis
thaliana] gi|332644870|gb|AEE78391.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 142 bits (358), Expect = 1e-31
Identities = 75/224 (33%), Positives = 128/224 (57%), Gaps = 6/224 (2%)
Frame = +2
Query: 29 QVLSILKAKDWGSETEEKLNGLTDISVDHVVSALTNQ---NPVKALSFFDCYKKHPS--- 190
+V +++ DW E E +L + + D+ V + + +P+KAL+FF S
Sbjct: 199 EVSAVVTKGDWSCEVERELQEMKLVLSDNFVIRVLKELREHPLKALAFFHWVGGGGSSSG 258
Query: 191 YKPSSPVYNAMLRAVSKKTHMAKFWELAEEMKSHGFLMEKHTYLLIKGRLRKDGTSEESA 370
Y+ S+ YNA LR +++ +A+FW + +EMK+ G+ M+ TY+ + + +K E+
Sbjct: 259 YQHSTVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETV 318
Query: 371 KVFIWMTENCQEVPTAQTCYDVIRFMANEDIPDIDAATRVLEAYKNCGGSMDKSVYDSLQ 550
K++ +M + + P+ Q C ++R+++ PD+D RV Y++ G S+ K+VYD +
Sbjct: 319 KLYEYMMDGPFK-PSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIH 377
Query: 551 RCLTRAGLVDEAMKLMDTMTKEGFAPDNVTYGQLIFGLCRANRL 682
R LT G DEA ++ M G+ PDN+TY QL+FGLC+A RL
Sbjct: 378 RSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRL 421
Score = 65.9 bits (159), Expect = 1e-08
Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 4/121 (3%)
Frame = +2
Query: 26 NQVLSILKAKDWGSETEEKLNGLTDISVDHVVSALT----NQNPVKALSFFDCYKKHPSY 193
+ +L ++ DW E EE L D+S+ H + + P KA F D +
Sbjct: 61 DSMLQLVLENDWSKEVEEGLRK-PDMSLTHETAIYVLRKLEKYPEKAYYFLDWVLRDSGL 119
Query: 194 KPSSPVYNAMLRAVSKKTHMAKFWELAEEMKSHGFLMEKHTYLLIKGRLRKDGTSEESAK 373
PS+P+Y+ MLR + ++ M +FW EMK GF +++ TY I G L K+ + ++
Sbjct: 120 SPSTPLYSIMLRILVQQRSMKRFWMTLREMKQGGFYLDEDTYKTIYGELSKEKSKADAVA 179
Query: 374 V 376
V
Sbjct: 180 V 180
>ref|XP_002877605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297323443|gb|EFH53864.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 618
Score = 141 bits (355), Expect = 2e-31
Identities = 75/221 (33%), Positives = 126/221 (57%), Gaps = 4/221 (1%)
Frame = +2
Query: 32 VLSILKAKDWGSETEEKLNGLTDISVDHVVSALTNQ---NPVKALSFFDCYKKHPS-YKP 199
V +++ DW E E +L + + D+ V + + +P+KAL+FF S Y+
Sbjct: 199 VSAVVTKVDWSCEVERELQEMNLVLSDNFVIRVLKELREHPLKALAFFHWVGGSSSGYQH 258
Query: 200 SSPVYNAMLRAVSKKTHMAKFWELAEEMKSHGFLMEKHTYLLIKGRLRKDGTSEESAKVF 379
S+ YNA LR +++ +A+FW + +EMK+ G M+ TY+ + + +K E+ K++
Sbjct: 259 STVTYNAALRVLARPNSVAEFWSVVDEMKTAGHEMDLDTYIKVSRQFQKSRMITETVKLY 318
Query: 380 IWMTENCQEVPTAQTCYDVIRFMANEDIPDIDAATRVLEAYKNCGGSMDKSVYDSLQRCL 559
+M + + P+ Q C ++R+++ PD+D RV Y++ G S+ K+VYD + R L
Sbjct: 319 EYMMDGPFK-PSIQDCSLLLRYLSARPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSL 377
Query: 560 TRAGLVDEAMKLMDTMTKEGFAPDNVTYGQLIFGLCRANRL 682
T G DEA ++ M G+ PDN+TY QL+FGLC+A RL
Sbjct: 378 TSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRL 418
Score = 66.2 bits (160), Expect = 9e-09
Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 4/121 (3%)
Frame = +2
Query: 26 NQVLSILKAKDWGSETEEKLNGLTDISVDHVVSALT----NQNPVKALSFFDCYKKHPSY 193
+ L ++ DW E EE L D+S+ H + + P KA F D +
Sbjct: 60 DSTLQLVLENDWSKEVEEGLRK-PDLSLTHETAIYVLRKLEKYPEKAYYFLDWVLRDSGL 118
Query: 194 KPSSPVYNAMLRAVSKKTHMAKFWELAEEMKSHGFLMEKHTYLLIKGRLRKDGTSEESAK 373
PS+P+Y+ MLR + ++ M +FW EMK GF +++ TY I G L K+ + ++
Sbjct: 119 SPSTPLYSIMLRILVQQRSMKRFWMTLSEMKQGGFYLDEDTYKTIYGELNKEKSKADAVA 178
Query: 374 V 376
V
Sbjct: 179 V 179
>ref|XP_006290749.1| hypothetical protein CARUB_v10016848mg [Capsella rubella]
gi|565465717|ref|XP_006290750.1| hypothetical protein
CARUB_v10016848mg [Capsella rubella]
gi|482559456|gb|EOA23647.1| hypothetical protein
CARUB_v10016848mg [Capsella rubella]
gi|482559457|gb|EOA23648.1| hypothetical protein
CARUB_v10016848mg [Capsella rubella]
Length = 618
Score = 138 bits (347), Expect = 2e-30
Identities = 76/230 (33%), Positives = 129/230 (56%), Gaps = 4/230 (1%)
Frame = +2
Query: 5 EAKVEEKNQVLSILKAKDWGSETEEKLNGLTDISVDHVVSALTNQ---NPVKALSFFDCY 175
E V +N ++LK DW E E++L + + D+ V + + +P+KAL+FF+
Sbjct: 191 EMYVVARNVSAAVLKV-DWSCEVEKELQEMKLVLSDNFVIRVLKELRDHPLKALAFFNWV 249
Query: 176 KKHPS-YKPSSPVYNAMLRAVSKKTHMAKFWELAEEMKSHGFLMEKHTYLLIKGRLRKDG 352
S Y+ S+ YNA LR +++ +A+FW + +EMK G+ M+ TY+ + + +K
Sbjct: 250 GGSSSGYQHSTVTYNAALRVLTRPNSVAEFWNVVDEMKIAGYEMDLDTYIRVSRQFQKSR 309
Query: 353 TSEESAKVFIWMTENCQEVPTAQTCYDVIRFMANEDIPDIDAATRVLEAYKNCGGSMDKS 532
E+ K++ +M + + P C ++R ++ PD+D RV +++ G S+ K+
Sbjct: 310 MMTEAVKLYEYMMDGPFK-PLVHDCSTLLRSLSAGPNPDLDLVFRVSRKFESSGNSLSKA 368
Query: 533 VYDSLQRCLTRAGLVDEAMKLMDTMTKEGFAPDNVTYGQLIFGLCRANRL 682
VYD + R LT G DEA +++ M + PDN+TY QL+FGLC+A RL
Sbjct: 369 VYDGIHRSLTSVGRFDEAEEIIKAMRNASYEPDNITYSQLVFGLCKAKRL 418
Score = 72.0 bits (175), Expect = 2e-10
Identities = 37/121 (30%), Positives = 63/121 (52%), Gaps = 4/121 (3%)
Frame = +2
Query: 26 NQVLSILKAKDWGSETEEKLNGLTDISVDHVVSALT----NQNPVKALSFFDCYKKHPSY 193
+ +L ++ DW E EE L D+S+ H + +NP KA F D +
Sbjct: 60 DSMLQLVLENDWSKEVEEGLRK-PDMSLTHETAIYVLRKLEKNPDKAYCFIDWVLRDSGL 118
Query: 194 KPSSPVYNAMLRAVSKKTHMAKFWELAEEMKSHGFLMEKHTYLLIKGRLRKDGTSEESAK 373
PS+P+Y+ MLR ++++ M +FW++ EMK GF ++ TY + G L+K + ++
Sbjct: 119 SPSTPLYSIMLRILAQQRSMKRFWKILSEMKQGGFYLDDDTYTTVYGELKKSESKADAVA 178
Query: 374 V 376
V
Sbjct: 179 V 179
>ref|XP_006404282.1| hypothetical protein EUTSA_v10010209mg [Eutrema salsugineum]
gi|557105401|gb|ESQ45735.1| hypothetical protein
EUTSA_v10010209mg [Eutrema salsugineum]
Length = 617
Score = 137 bits (345), Expect = 3e-30
Identities = 80/222 (36%), Positives = 126/222 (56%), Gaps = 5/222 (2%)
Frame = +2
Query: 32 VLSILKAKDWGSETEEKLN----GLTDISVDHVVSALTNQNPVKALSFFDCYKKHPS-YK 196
V +++ DW E E KL L+D V V+ L + +P+KAL+FF S YK
Sbjct: 199 VSALVSKVDWSYEVESKLQDMKLALSDNFVIRVLKELRD-HPLKALAFFHWVGGSSSGYK 257
Query: 197 PSSPVYNAMLRAVSKKTHMAKFWELAEEMKSHGFLMEKHTYLLIKGRLRKDGTSEESAKV 376
S+ YNA LR +++ +A+FW + +EMK G ++ TY+ + + +K E+ K+
Sbjct: 258 HSTITYNAALRVLARPNSVAEFWSVVDEMKVAGHEVDLDTYIKVLRQFQKSRMMIEAVKL 317
Query: 377 FIWMTENCQEVPTAQTCYDVIRFMANEDIPDIDAATRVLEAYKNCGGSMDKSVYDSLQRC 556
+ M + + P+AQ C ++R ++ PD+D RV Y++ G S+ K+VYD + R
Sbjct: 318 YELMMDGPFK-PSAQDCSLLLRSLSAGHKPDLDLVFRVSRKYESTGKSLSKAVYDGIHRS 376
Query: 557 LTRAGLVDEAMKLMDTMTKEGFAPDNVTYGQLIFGLCRANRL 682
LT G DEA +++ M G+ PDN+TY QL+FGLC+A RL
Sbjct: 377 LTSVGRFDEAEEIIKAMRDSGYEPDNITYSQLVFGLCKAKRL 418
Score = 64.7 bits (156), Expect = 3e-08
Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Frame = +2
Query: 32 VLSILKAKDWGSETEEKLNG----LTDISVDHVVSALTNQNPVKALSFFDCYKKHPSYKP 199
+L ++ DW E EE L LT + +V+ L +++P KA SF D + P
Sbjct: 62 MLQLVVENDWSREVEEGLKKPDMPLTHETAIYVLRKL-DKHPDKAYSFLDWVIRESGLSP 120
Query: 200 SSPVYNAMLRAVSKKTHMAKFWELAEEMKSHGFLMEKHTYLLIKGRLRKDGTSEES 367
SSP+Y+ MLR + ++ M +FW +MK GF M++ TY + L K+ + ++
Sbjct: 121 SSPLYSTMLRILVQQRSMKRFWMTLSDMKRGGFYMDEETYQTVYSLLDKENSKADA 176
>ref|XP_004515902.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Cicer arietinum]
Length = 635
Score = 135 bits (341), Expect = 9e-30
Identities = 74/223 (33%), Positives = 124/223 (55%), Gaps = 4/223 (1%)
Frame = +2
Query: 26 NQVLSILKAKDWGSETEEKLNGL----TDISVDHVVSALTNQNPVKALSFFDCYKKHPSY 193
N+V+ ++ +WG E +L L +D V V+ L N P+KA FF Y
Sbjct: 205 NKVVGVILGSEWGDEVMNELAELEIRLSDSFVTRVLKELQNC-PLKAYKFFHWVGSQSVY 263
Query: 194 KPSSPVYNAMLRAVSKKTHMAKFWELAEEMKSHGFLMEKHTYLLIKGRLRKDGTSEESAK 373
+ ++ YNA+ R +++ + +FW + EEMKS + ++ TY I +L K+ E + +
Sbjct: 264 EHNTVTYNAVARVLARPGSIKEFWSILEEMKSVRYQLDIDTYTTITMQLVKNQMIENAVE 323
Query: 374 VFIWMTENCQEVPTAQTCYDVIRFMANEDIPDIDAATRVLEAYKNCGGSMDKSVYDSLQR 553
++ M + + P+ C ++ ++ D P+ D A RV + Y++ G ++ K +YD + R
Sbjct: 324 LYELMMDGSYK-PSTHDCCVLLNAISTSDFPNSDLAFRVAKKYESVGHTLTKEIYDGIHR 382
Query: 554 CLTRAGLVDEAMKLMDTMTKEGFAPDNVTYGQLIFGLCRANRL 682
LT AG DEA K++ TM+ GF PD+VTY Q++FGLC+ RL
Sbjct: 383 SLTSAGKFDEAEKIVKTMSNAGFEPDSVTYSQVVFGLCKMKRL 425
>ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Glycine max]
Length = 635
Score = 134 bits (338), Expect = 2e-29
Identities = 71/222 (31%), Positives = 125/222 (56%), Gaps = 4/222 (1%)
Frame = +2
Query: 26 NQVLSILKAKDWGSETEEKLNGLT-DISVDHVVSALTN--QNPVKALSFFDCYKKHPSYK 196
+ V+ I+ +WG E +L L +S + V+ L + P+KA FF K Y+
Sbjct: 202 SNVVGIISRSEWGDEVVGELAKLEIQLSDNFVIRVLKELRKTPLKAYKFFHWVGKQSGYE 261
Query: 197 PSSPVYNAMLRAVSKKTHMAKFWELAEEMKSHGFLMEKHTYLLIKGRLRKDGTSEESAKV 376
+ YNA+ R + + + +FW + EEMK G ++ TY+ I +L+++ E++ K+
Sbjct: 262 HDTVTYNAVARVLPRAESIEEFWSVIEEMKRVGHELDIDTYIKITRQLQRNRMMEDAVKL 321
Query: 377 F-IWMTENCQEVPTAQTCYDVIRFMANEDIPDIDAATRVLEAYKNCGGSMDKSVYDSLQR 553
+ + M +C+ P Q C +++ ++ D P++D RV + Y++ G ++ K++YD + R
Sbjct: 322 YELMMDGSCK--PLVQDCNMLLKSISANDKPNLDLVFRVAKKYESTGHTLSKAIYDGIHR 379
Query: 554 CLTRAGLVDEAMKLMDTMTKEGFAPDNVTYGQLIFGLCRANR 679
LT AG DEA ++ TM G+ PDN+TY Q++FGLC+ R
Sbjct: 380 SLTSAGNFDEAENIVRTMRNAGYEPDNITYSQMVFGLCKMRR 421
Score = 67.8 bits (164), Expect = 3e-09
Identities = 55/239 (23%), Positives = 100/239 (41%), Gaps = 33/239 (13%)
Frame = +2
Query: 26 NQVLSILKAKDWGSETEEKLNG----LTDISVDHVVSALTNQNPVKALSFFDCYKKHPSY 193
N ++ +L DW E KL + +V +V+ L ++NP KA FF+ K +
Sbjct: 65 NSIVELLLTNDWSQALELKLENRFPSMPHETVLYVIKRL-DKNPEKASCFFNWVCKKVWF 123
Query: 194 KPSSPVYNAMLRAVSKKTHMAKFWELAEEMKSHGFLMEKHTYLLIKGRLRKDGTSEESAK 373
+PS VY+ ++R ++ K M +FW MK +GF +++ TYL I +++ +S
Sbjct: 124 RPSCSVYSLIVRILAAKDTMKQFWVTLRMMKENGFFLDEETYLTISVGFKREKMDSDSVA 183
Query: 374 VFIWMTENCQEVPTAQTCYDVIRFMANEDIPD----------------------IDAATR 487
+ + +E +V+ ++ + D +
Sbjct: 184 LTHFYNRMLEENAMQSVVSNVVGIISRSEWGDEVVGELAKLEIQLSDNFVIRVLKELRKT 243
Query: 488 VLEAY-------KNCGGSMDKSVYDSLQRCLTRAGLVDEAMKLMDTMTKEGFAPDNVTY 643
L+AY K G D Y+++ R L RA ++E +++ M + G D TY
Sbjct: 244 PLKAYKFFHWVGKQSGYEHDTVTYNAVARVLPRAESIEEFWSVIEEMKRVGHELDIDTY 302
>ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Cucumis sativus]
gi|449524136|ref|XP_004169079.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Cucumis sativus]
Length = 632
Score = 133 bits (335), Expect = 4e-29
Identities = 76/222 (34%), Positives = 121/222 (54%), Gaps = 4/222 (1%)
Frame = +2
Query: 29 QVLSILKAKDWGSETEEKLN----GLTDISVDHVVSALTNQNPVKALSFFDCYKKHPSYK 196
+V+ I+ DW ++ KL L+D V V+ L N +P+KALSFF P Y
Sbjct: 197 KVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKELRN-SPLKALSFFHWVGCRPDYD 255
Query: 197 PSSPVYNAMLRAVSKKTHMAKFWELAEEMKSHGFLMEKHTYLLIKGRLRKDGTSEESAKV 376
++ YNA+ R + + + FW + EEMK ++ TY+ I + +K E+ K+
Sbjct: 256 HNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDIDTYIKISRQFQKSKMMGEAVKL 315
Query: 377 FIWMTENCQEVPTAQTCYDVIRFMANEDIPDIDAATRVLEAYKNCGGSMDKSVYDSLQRC 556
+ M + + P+ Q C ++R +A D PD+ RV + ++ G S+ K++YD + R
Sbjct: 316 YELMMDGPYK-PSLQDCSVLLRTIAASDNPDLSLVYRVAKKFEATGYSLSKAMYDGIHRS 374
Query: 557 LTRAGLVDEAMKLMDTMTKEGFAPDNVTYGQLIFGLCRANRL 682
LT G D+A ++ +M G+ PDNVTY QL+FGLC+A RL
Sbjct: 375 LTSTGKFDDAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRL 416
>gb|ESW27478.1| hypothetical protein PHAVU_003G205300g [Phaseolus vulgaris]
Length = 631
Score = 132 bits (332), Expect = 1e-28
Identities = 70/221 (31%), Positives = 123/221 (55%), Gaps = 4/221 (1%)
Frame = +2
Query: 29 QVLSILKAKDWGSETEEKLNGL----TDISVDHVVSALTNQNPVKALSFFDCYKKHPSYK 196
+V+ I+ +WG E +L L +D V V+ L N P+K+ FF P Y+
Sbjct: 201 KVVGIISVSEWGEEVMGELAKLKIQLSDNFVIRVLKDLRN-TPLKSYKFFHWVGTQPGYE 259
Query: 197 PSSPVYNAMLRAVSKKTHMAKFWELAEEMKSHGFLMEKHTYLLIKGRLRKDGTSEESAKV 376
++ YNA+ +++ + +FW + EE+KS G ++ TY+ I +L+K+ E++ K+
Sbjct: 260 HNTVTYNAVASVLARNDSIQEFWSVIEELKSVGHELDIDTYIKISRQLQKNRMMEDAVKL 319
Query: 377 FIWMTENCQEVPTAQTCYDVIRFMANEDIPDIDAATRVLEAYKNCGGSMDKSVYDSLQRC 556
+ M + + P Q C +++ ++ D P++D RV Y++ G ++ K++YD + R
Sbjct: 320 YEHMMDGSYK-PLVQDCSLLLKSISASDKPNLDLVFRVARKYESTGHTLSKAIYDGIHRS 378
Query: 557 LTRAGLVDEAMKLMDTMTKEGFAPDNVTYGQLIFGLCRANR 679
LT AG DEA ++ TM G PDN+TY Q+++GLC+ R
Sbjct: 379 LTGAGKFDEAENIVRTMRNAGHKPDNITYSQVVYGLCKMRR 419
Score = 60.8 bits (146), Expect = 4e-07
Identities = 33/117 (28%), Positives = 61/117 (52%), Gaps = 3/117 (2%)
Frame = +2
Query: 26 NQVLSILKAKDWGSETEEKL-NGLTDISVDHVVSALT--NQNPVKALSFFDCYKKHPSYK 196
+ ++ ++ DW E L N +S + V+ + ++NP KA FF+ K ++
Sbjct: 63 SSIVELVSTNDWSQALELNLENSCPSMSHETVIYVIKRLDKNPEKASCFFNWVIKKDWFR 122
Query: 197 PSSPVYNAMLRAVSKKTHMAKFWELAEEMKSHGFLMEKHTYLLIKGRLRKDGTSEES 367
PSS V++ ++R ++ K M +FW MK GF + + TYL I R +++ + +S
Sbjct: 123 PSSSVFSLIIRILATKDTMKQFWITLRMMKDQGFYLNEETYLTIYVRFKREKMNSDS 179
>ref|XP_004236267.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Solanum lycopersicum]
Length = 642
Score = 131 bits (329), Expect = 2e-28
Identities = 71/222 (31%), Positives = 121/222 (54%), Gaps = 5/222 (2%)
Frame = +2
Query: 32 VLSILKAKDWGSETEEKLNGLTDISVDHVVSALTNQ-----NPVKALSFFDCYKKHPSYK 196
V ++ ++WG E E +L + D+ V + + NP+KA SFF ++ ++
Sbjct: 205 VSELITKQEWGVEVERQLGEMKLSVSDNFVLRVLKELREVGNPLKAFSFFKWVARNLDFQ 264
Query: 197 PSSPVYNAMLRAVSKKTHMAKFWELAEEMKSHGFLMEKHTYLLIKGRLRKDGTSEESAKV 376
S+ YN +LR + ++ + +FW + +EM S GF ++ TY+ I +K +++ ++
Sbjct: 265 HSTVTYNGILRVLCREESIEEFWGVVKEMMSLGFEIDLDTYIKISRHFQKIKMLKDAVEL 324
Query: 377 FIWMTENCQEVPTAQTCYDVIRFMANEDIPDIDAATRVLEAYKNCGGSMDKSVYDSLQRC 556
+ M + Q P+ C ++R +A D+D RV+E ++ G S K +YD + RC
Sbjct: 325 YELMMDG-QFKPSLGECNILLRSIAQSYSSDLDLLFRVVEKFEAAGHSRSKIIYDVIHRC 383
Query: 557 LTRAGLVDEAMKLMDTMTKEGFAPDNVTYGQLIFGLCRANRL 682
LT G +EA K+ + M GF PDN+TY QLI+GLC+ RL
Sbjct: 384 LTNLGRFEEAEKITEAMRDAGFEPDNITYSQLIYGLCKVRRL 425
Score = 58.2 bits (139), Expect = 2e-06
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Frame = +2
Query: 35 LSILKAKDWGSETEEKLNGLTDISVDH----VVSALTNQNPVKALSFFDCYKKHPSYKPS 202
+ I+ + DW + E+ L G D V H + ++ P KA F K +KPS
Sbjct: 69 VDIILSNDWSKQLEKDL-GKNDFPVTHEAVMYLLKKLDKEPRKAGDFLKWVVKQKGFKPS 127
Query: 203 SPVYNAMLRAVSKKTHMAKFWELAEEMKSHGFLMEKHTY 319
S +Y+ MLR + + M FW +EMK +GF +++ TY
Sbjct: 128 SSMYSLMLRIYANRDSMKDFWTTIKEMKENGFYIDEETY 166
>ref|XP_003549820.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Glycine max]
Length = 635
Score = 131 bits (329), Expect = 2e-28
Identities = 71/222 (31%), Positives = 124/222 (55%), Gaps = 4/222 (1%)
Frame = +2
Query: 29 QVLSILKAKDWGSETEEKLNGL----TDISVDHVVSALTNQNPVKALSFFDCYKKHPSYK 196
+V+ I+ +WG E L L +D V V+ L N P+KA FF+ K Y+
Sbjct: 207 KVVDIISGSEWGDEVMSNLAKLEIRMSDNFVTRVLKELRNC-PLKAYEFFNWVGKQSGYE 265
Query: 197 PSSPVYNAMLRAVSKKTHMAKFWELAEEMKSHGFLMEKHTYLLIKGRLRKDGTSEESAKV 376
+ YNA+ R ++ + KFW + EEMKS G ++ TY+ I +L+K+ E++ K+
Sbjct: 266 HDTVTYNAIARVLASTDSIEKFWSVIEEMKSVGHELDIDTYIKISKKLQKNKMMEDAVKL 325
Query: 377 FIWMTENCQEVPTAQTCYDVIRFMANEDIPDIDAATRVLEAYKNCGGSMDKSVYDSLQRC 556
+ +T + P+ + C +++ ++ D P++D RV + Y++ ++ K++YD + R
Sbjct: 326 YE-LTMDGSYKPSVKDCSLLLKSISASDDPNLDLVFRVSKKYESTWHTLSKAIYDGIHRS 384
Query: 557 LTRAGLVDEAMKLMDTMTKEGFAPDNVTYGQLIFGLCRANRL 682
L+ AG +DEA +++ M G+ PDN+TY Q IFG C+ +L
Sbjct: 385 LSGAGKLDEAESIVNHMRNAGYEPDNITYNQTIFGFCKMRKL 426
Score = 60.8 bits (146), Expect = 4e-07
Identities = 49/239 (20%), Positives = 96/239 (40%), Gaps = 33/239 (13%)
Frame = +2
Query: 26 NQVLSILKAKDWGSETEEKLN----GLTDISVDHVVSALTNQNPVKALSFFDCYKKHPSY 193
N ++ ++ DW E++L +T +V +V+ + NP KA FF+ Y
Sbjct: 69 NSIVELVLTSDWSKGLEQELEKCYPSMTHETVVYVLKRM-EANPEKAWCFFNWVSAKEWY 127
Query: 194 KPSSPVYNAMLRAVSKKTHMAKFWELAEEMKSHGFLMEKHTYLLIKGRLRKDGTSEESAK 373
+PSS +Y +LR ++ + + FW MK+ GF ++ Y I ++ +++
Sbjct: 128 RPSSSLYGLILRVLATEETIKLFWITLRTMKTKGFYFDEEMYFPILAGFKRKNMNKDRVS 187
Query: 374 VFIWMTENCQEVPTAQTCYDVIRFMANEDIPD--------------IDAATRVLEAYKNC 511
+ + ++ QE V+ ++ + D + TRVL+ +NC
Sbjct: 188 LTRFYSQGIQENAMQIVVTKVVDIISGSEWGDEVMSNLAKLEIRMSDNFVTRVLKELRNC 247
Query: 512 ---------------GGSMDKSVYDSLQRCLTRAGLVDEAMKLMDTMTKEGFAPDNVTY 643
G D Y+++ R L +++ +++ M G D TY
Sbjct: 248 PLKAYEFFNWVGKQSGYEHDTVTYNAIARVLASTDSIEKFWSVIEEMKSVGHELDIDTY 306
>ref|XP_004299145.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 630
Score = 128 bits (321), Expect = 2e-27
Identities = 68/225 (30%), Positives = 126/225 (56%), Gaps = 3/225 (1%)
Frame = +2
Query: 17 EEKNQVLSILKAKDWGSETEEKLNGL-TDISVDHVVSALTNQN--PVKALSFFDCYKKHP 187
E+ +V+ ++ +W + E++L + ++S VV L + P+KAL FF ++
Sbjct: 199 EDVKKVMDVVLGAEWSDKVEKELGEIDVELSEKFVVRVLRDLRVCPLKALRFFRWVEQCA 258
Query: 188 SYKPSSPVYNAMLRAVSKKTHMAKFWELAEEMKSHGFLMEKHTYLLIKGRLRKDGTSEES 367
Y+ +S YN M + + + + +FW + EEMK G ++ TY+ + + +K E++
Sbjct: 259 GYEHNSVTYNGMSLVLGQASSIGEFWSVIEEMKVAGQELDLDTYIKLSRQFQKSKMVEDA 318
Query: 368 AKVFIWMTENCQEVPTAQTCYDVIRFMANEDIPDIDAATRVLEAYKNCGGSMDKSVYDSL 547
K++ M + + P+ Q ++R ++ + PD+D RV++ +++ G ++ K+VYD +
Sbjct: 319 VKLYELMMDGPYK-PSVQDVSILLRSISANERPDMDLVFRVVKKFESAGFTLSKAVYDGI 377
Query: 548 QRCLTRAGLVDEAMKLMDTMTKEGFAPDNVTYGQLIFGLCRANRL 682
R LT G DEA + M GF PDN+TY Q++FGLC+A +L
Sbjct: 378 HRSLTNLGRFDEAEDTLIAMRNAGFEPDNITYSQVVFGLCKAKKL 422
Score = 60.5 bits (145), Expect = 5e-07
Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 4/122 (3%)
Frame = +2
Query: 26 NQVLSILKAKDWGSETEEKLN----GLTDISVDHVVSALTNQNPVKALSFFDCYKKHPSY 193
N VL ++ + W E E +L+ LT V +V+ L N++P KA SFF+ + +
Sbjct: 65 NSVLQLVLSNQWSPELETELSESHLSLTHDVVIYVLKKL-NKDPAKAWSFFNWVCEKKGF 123
Query: 194 KPSSPVYNAMLRAVSKKTHMAKFWELAEEMKSHGFLMEKHTYLLIKGRLRKDGTSEESAK 373
P +++ MLR + K M +FW + M+ GF ++ TYL I L K G +
Sbjct: 124 SPGHSMFSLMLRVLVHKDTMRQFWGVLTRMRDEGFYIDAQTYLSIL-ELLKTGKMDADVS 182
Query: 374 VF 379
F
Sbjct: 183 AF 184