BLASTX nr result
ID: Ephedra28_contig00020238
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00020238
(486 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 89 8e-16
ref|XP_004144791.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 89 8e-16
gb|EMJ16117.1| hypothetical protein PRUPE_ppa000719mg [Prunus pe... 86 7e-15
ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 84 1e-14
gb|EXB77631.1| DNA-directed RNA polymerase 2 [Morus notabilis] 83 3e-14
ref|XP_006857036.1| hypothetical protein AMTR_s00065p00022170 [A... 83 3e-14
emb|CAN65186.1| hypothetical protein VITISV_023905 [Vitis vinifera] 83 4e-14
ref|XP_002311418.2| hypothetical protein POPTR_0008s11200g [Popu... 82 7e-14
gb|EOY31498.1| DNA/RNA polymerases superfamily protein isoform 3... 82 7e-14
gb|EOY31497.1| DNA/RNA polymerases superfamily protein isoform 2... 82 7e-14
gb|EOY31496.1| DNA/RNA polymerases superfamily protein isoform 1... 82 7e-14
dbj|BAD23376.1| putative phage-type RNA polymerase [Oryza sativa... 81 1e-13
ref|NP_001062659.1| Os09g0246200 [Oryza sativa Japonica Group] g... 81 1e-13
gb|EEE69251.1| hypothetical protein OsJ_28503 [Oryza sativa Japo... 81 1e-13
gb|EAZ08263.1| hypothetical protein OsI_30516 [Oryza sativa Indi... 81 1e-13
gb|ABD96891.1| hypothetical protein [Cleome spinosa] 81 1e-13
emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris] 81 2e-13
dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymer... 81 2e-13
ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 81 2e-13
sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymeras... 81 2e-13
>ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
[Cucumis sativus]
Length = 975
Score = 88.6 bits (218), Expect = 8e-16
Identities = 38/61 (62%), Positives = 47/61 (77%)
Frame = +2
Query: 302 QVETETEAWRKATEEYKELTEEMCMSNMAPNLPYVKSLFLGWFDPLRNAIDALQKNHQAK 481
Q++ ETEAW K EEYKEL EMC +APNLPYVK LFLGWF+PL+NAI+ QK ++K
Sbjct: 147 QIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKKLFLGWFEPLKNAIEEEQKTQRSK 206
Query: 482 E 484
+
Sbjct: 207 K 207
>ref|XP_004144791.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
[Cucumis sativus]
Length = 975
Score = 88.6 bits (218), Expect = 8e-16
Identities = 38/61 (62%), Positives = 47/61 (77%)
Frame = +2
Query: 302 QVETETEAWRKATEEYKELTEEMCMSNMAPNLPYVKSLFLGWFDPLRNAIDALQKNHQAK 481
Q++ ETEAW K EEYKEL EMC +APNLPYVK LFLGWF+PL+NAI+ QK ++K
Sbjct: 147 QIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKKLFLGWFEPLKNAIEEEQKTQRSK 206
Query: 482 E 484
+
Sbjct: 207 K 207
>gb|EMJ16117.1| hypothetical protein PRUPE_ppa000719mg [Prunus persica]
Length = 1024
Score = 85.5 bits (210), Expect = 7e-15
Identities = 47/118 (39%), Positives = 65/118 (55%)
Frame = +2
Query: 110 NVLRASISTALEPLVSSEDEVKDFFTHKSATVTGSLRLEEQIKQXXXXXXXXXXXXXXXX 289
+V A ST +E VS DEV++ S + +++ +Q
Sbjct: 132 SVAEAVSSTDVEEEVSVVDEVQELLQQMSIEEKREAQYKQRTRQNRARGMGQGKYHMLKR 191
Query: 290 XXXXQVETETEAWRKATEEYKELTEEMCMSNMAPNLPYVKSLFLGWFDPLRNAIDALQ 463
Q++ ETEAW +A +EY+EL +MC +APNLPY+KSLFLGWF+PLRNAID Q
Sbjct: 192 R---QIKIETEAWERAAKEYRELMMDMCEQKLAPNLPYMKSLFLGWFEPLRNAIDKEQ 246
>ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Vitis
vinifera]
Length = 979
Score = 84.3 bits (207), Expect = 1e-14
Identities = 36/61 (59%), Positives = 46/61 (75%)
Frame = +2
Query: 302 QVETETEAWRKATEEYKELTEEMCMSNMAPNLPYVKSLFLGWFDPLRNAIDALQKNHQAK 481
QV+ ETEAW + EEY+E+ EMC +APNLPYVK+LFLGWF+PLR AID Q+ + K
Sbjct: 150 QVKAETEAWERMVEEYREIEREMCEKKLAPNLPYVKALFLGWFEPLREAIDKEQRAQRTK 209
Query: 482 E 484
+
Sbjct: 210 K 210
>gb|EXB77631.1| DNA-directed RNA polymerase 2 [Morus notabilis]
Length = 935
Score = 83.2 bits (204), Expect = 3e-14
Identities = 36/55 (65%), Positives = 44/55 (80%)
Frame = +2
Query: 302 QVETETEAWRKATEEYKELTEEMCMSNMAPNLPYVKSLFLGWFDPLRNAIDALQK 466
QV+ ETEAW KA+ EYK++ +EMC +APNLPY+KSLFLGWF+PLR AI QK
Sbjct: 111 QVKLETEAWEKASNEYKQMVDEMCKKKLAPNLPYMKSLFLGWFEPLREAIKDEQK 165
>ref|XP_006857036.1| hypothetical protein AMTR_s00065p00022170 [Amborella trichopoda]
gi|548861119|gb|ERN18503.1| hypothetical protein
AMTR_s00065p00022170 [Amborella trichopoda]
Length = 987
Score = 83.2 bits (204), Expect = 3e-14
Identities = 39/63 (61%), Positives = 48/63 (76%), Gaps = 3/63 (4%)
Frame = +2
Query: 302 QVETETEAWRKATEEYKELTEEMCMSNMAPNLPYVKSLFLGWFDPLRNAI---DALQKNH 472
QV+ ETEAW +A EY+EL EMC +APNLPY+KSLFLGWF+PLR+AI ALQ+
Sbjct: 156 QVKIETEAWERAVREYRELISEMCEQKLAPNLPYMKSLFLGWFEPLRDAIAEEQALQETK 215
Query: 473 QAK 481
+AK
Sbjct: 216 RAK 218
>emb|CAN65186.1| hypothetical protein VITISV_023905 [Vitis vinifera]
Length = 1312
Score = 82.8 bits (203), Expect = 4e-14
Identities = 35/61 (57%), Positives = 46/61 (75%)
Frame = +2
Query: 302 QVETETEAWRKATEEYKELTEEMCMSNMAPNLPYVKSLFLGWFDPLRNAIDALQKNHQAK 481
QV+ ETEAW + EEY+E+ EMC +APNLPYVK+LFLGWF+PLR AI+ Q+ + K
Sbjct: 150 QVKAETEAWERMVEEYREIEREMCEKKLAPNLPYVKALFLGWFEPLREAIEKEQRAQRTK 209
Query: 482 E 484
+
Sbjct: 210 K 210
>ref|XP_002311418.2| hypothetical protein POPTR_0008s11200g [Populus trichocarpa]
gi|550332836|gb|EEE88785.2| hypothetical protein
POPTR_0008s11200g [Populus trichocarpa]
Length = 988
Score = 82.0 bits (201), Expect = 7e-14
Identities = 35/55 (63%), Positives = 46/55 (83%)
Frame = +2
Query: 302 QVETETEAWRKATEEYKELTEEMCMSNMAPNLPYVKSLFLGWFDPLRNAIDALQK 466
Q++ ETEAW +A +EY+E+ E+MC +APNLPYVKSLFLGWF+PLR+AI A Q+
Sbjct: 149 QIKMETEAWEQAAQEYQEMLEDMCEQKLAPNLPYVKSLFLGWFEPLRDAIVAEQE 203
>gb|EOY31498.1| DNA/RNA polymerases superfamily protein isoform 3 [Theobroma cacao]
Length = 927
Score = 82.0 bits (201), Expect = 7e-14
Identities = 37/60 (61%), Positives = 43/60 (71%)
Frame = +2
Query: 302 QVETETEAWRKATEEYKELTEEMCMSNMAPNLPYVKSLFLGWFDPLRNAIDALQKNHQAK 481
QV+ ETEAW K EEY+EL EMC +APNLPYVK LFLGWF+P+R AI QK + K
Sbjct: 147 QVKEETEAWEKMVEEYRELQREMCEKKLAPNLPYVKGLFLGWFEPMREAIAREQKVQKGK 206
>gb|EOY31497.1| DNA/RNA polymerases superfamily protein isoform 2 [Theobroma cacao]
Length = 857
Score = 82.0 bits (201), Expect = 7e-14
Identities = 37/60 (61%), Positives = 43/60 (71%)
Frame = +2
Query: 302 QVETETEAWRKATEEYKELTEEMCMSNMAPNLPYVKSLFLGWFDPLRNAIDALQKNHQAK 481
QV+ ETEAW K EEY+EL EMC +APNLPYVK LFLGWF+P+R AI QK + K
Sbjct: 25 QVKEETEAWEKMVEEYRELQREMCEKKLAPNLPYVKGLFLGWFEPMREAIAREQKVQKGK 84
>gb|EOY31496.1| DNA/RNA polymerases superfamily protein isoform 1 [Theobroma cacao]
Length = 978
Score = 82.0 bits (201), Expect = 7e-14
Identities = 37/60 (61%), Positives = 43/60 (71%)
Frame = +2
Query: 302 QVETETEAWRKATEEYKELTEEMCMSNMAPNLPYVKSLFLGWFDPLRNAIDALQKNHQAK 481
QV+ ETEAW K EEY+EL EMC +APNLPYVK LFLGWF+P+R AI QK + K
Sbjct: 147 QVKEETEAWEKMVEEYRELQREMCEKKLAPNLPYVKGLFLGWFEPMREAIAREQKVQKGK 206
>dbj|BAD23376.1| putative phage-type RNA polymerase [Oryza sativa Japonica Group]
gi|48716846|dbj|BAD23544.1| putative phage-type RNA
polymerase [Oryza sativa Japonica Group]
gi|215694941|dbj|BAG90132.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 951
Score = 81.3 bits (199), Expect = 1e-13
Identities = 35/55 (63%), Positives = 44/55 (80%)
Frame = +2
Query: 302 QVETETEAWRKATEEYKELTEEMCMSNMAPNLPYVKSLFLGWFDPLRNAIDALQK 466
Q++ ETEAW +A EEY+EL +MC +APNLPYVKSLFLGWF+PLR+ I A Q+
Sbjct: 184 QIQIETEAWEQAAEEYRELLADMCQQKLAPNLPYVKSLFLGWFEPLRDQIIAEQE 238
>ref|NP_001062659.1| Os09g0246200 [Oryza sativa Japonica Group]
gi|30698494|dbj|BAC76604.1| RpoT1 [Oryza sativa Japonica
Group] gi|37360973|dbj|BAC98395.1| T7 bacteriophage-type
single subunit RNA polymerase [Oryza sativa Japonica
Group] gi|113630892|dbj|BAF24573.1| Os09g0246200 [Oryza
sativa Japonica Group]
Length = 1017
Score = 81.3 bits (199), Expect = 1e-13
Identities = 35/55 (63%), Positives = 44/55 (80%)
Frame = +2
Query: 302 QVETETEAWRKATEEYKELTEEMCMSNMAPNLPYVKSLFLGWFDPLRNAIDALQK 466
Q++ ETEAW +A EEY+EL +MC +APNLPYVKSLFLGWF+PLR+ I A Q+
Sbjct: 184 QIQIETEAWEQAAEEYRELLADMCQQKLAPNLPYVKSLFLGWFEPLRDQIIAEQE 238
>gb|EEE69251.1| hypothetical protein OsJ_28503 [Oryza sativa Japonica Group]
Length = 983
Score = 81.3 bits (199), Expect = 1e-13
Identities = 35/55 (63%), Positives = 44/55 (80%)
Frame = +2
Query: 302 QVETETEAWRKATEEYKELTEEMCMSNMAPNLPYVKSLFLGWFDPLRNAIDALQK 466
Q++ ETEAW +A EEY+EL +MC +APNLPYVKSLFLGWF+PLR+ I A Q+
Sbjct: 150 QIQIETEAWEQAAEEYRELLADMCQQKLAPNLPYVKSLFLGWFEPLRDQIIAEQE 204
>gb|EAZ08263.1| hypothetical protein OsI_30516 [Oryza sativa Indica Group]
Length = 845
Score = 81.3 bits (199), Expect = 1e-13
Identities = 35/55 (63%), Positives = 44/55 (80%)
Frame = +2
Query: 302 QVETETEAWRKATEEYKELTEEMCMSNMAPNLPYVKSLFLGWFDPLRNAIDALQK 466
Q++ ETEAW +A EEY+EL +MC +APNLPYVKSLFLGWF+PLR+ I A Q+
Sbjct: 126 QIQIETEAWEQAAEEYRELLADMCQQKLAPNLPYVKSLFLGWFEPLRDQIIAEQE 180
>gb|ABD96891.1| hypothetical protein [Cleome spinosa]
Length = 1021
Score = 81.3 bits (199), Expect = 1e-13
Identities = 36/50 (72%), Positives = 40/50 (80%)
Frame = +2
Query: 302 QVETETEAWRKATEEYKELTEEMCMSNMAPNLPYVKSLFLGWFDPLRNAI 451
QV+ ETEAW KA EYKEL +MC +APNLPYVKSLFLGWF+PLR AI
Sbjct: 196 QVKIETEAWEKAANEYKELLTDMCEQKLAPNLPYVKSLFLGWFEPLREAI 245
>emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris]
Length = 1002
Score = 80.9 bits (198), Expect = 2e-13
Identities = 35/55 (63%), Positives = 45/55 (81%)
Frame = +2
Query: 302 QVETETEAWRKATEEYKELTEEMCMSNMAPNLPYVKSLFLGWFDPLRNAIDALQK 466
Q++ ETEAW +A +EY+EL +MC +APNLPY+KSLFLGWF+PLR+AI A QK
Sbjct: 173 QIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQK 227
>dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
sylvestris]
Length = 1002
Score = 80.9 bits (198), Expect = 2e-13
Identities = 35/55 (63%), Positives = 45/55 (81%)
Frame = +2
Query: 302 QVETETEAWRKATEEYKELTEEMCMSNMAPNLPYVKSLFLGWFDPLRNAIDALQK 466
Q++ ETEAW +A +EY+EL +MC +APNLPY+KSLFLGWF+PLR+AI A QK
Sbjct: 173 QIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQK 227
>ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like
[Solanum tuberosum]
Length = 993
Score = 80.9 bits (198), Expect = 2e-13
Identities = 35/55 (63%), Positives = 44/55 (80%)
Frame = +2
Query: 302 QVETETEAWRKATEEYKELTEEMCMSNMAPNLPYVKSLFLGWFDPLRNAIDALQK 466
Q++ ETEAW A +EY+EL +MC +APNLPY+KSLFLGWF+PLR+AI A QK
Sbjct: 165 QIKVETEAWEDAAKEYQELLMDMCEQKLAPNLPYIKSLFLGWFEPLRDAIAAEQK 219
>sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymerase 1B, mitochondrial;
AltName: Full=NictaRpoT1-tom; AltName: Full=T7
bacteriophage-type single subunit RNA polymerase 1B;
Flags: Precursor
Length = 1002
Score = 80.9 bits (198), Expect = 2e-13
Identities = 35/55 (63%), Positives = 45/55 (81%)
Frame = +2
Query: 302 QVETETEAWRKATEEYKELTEEMCMSNMAPNLPYVKSLFLGWFDPLRNAIDALQK 466
Q++ ETEAW +A +EY+EL +MC +APNLPY+KSLFLGWF+PLR+AI A QK
Sbjct: 173 QIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQK 227