BLASTX nr result

ID: Ephedra28_contig00020114 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00020114
         (779 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006830235.1| hypothetical protein AMTR_s00130p00061410 [A...    60   8e-07
gb|EXC10952.1| DNA polymerase III subunit [Morus notabilis]            57   7e-06

>ref|XP_006830235.1| hypothetical protein AMTR_s00130p00061410 [Amborella trichopoda]
           gi|548836458|gb|ERM97651.1| hypothetical protein
           AMTR_s00130p00061410 [Amborella trichopoda]
          Length = 1219

 Score = 60.1 bits (144), Expect = 8e-07
 Identities = 25/33 (75%), Positives = 27/33 (81%)
 Frame = -3

Query: 102 LRERDCNIQEHLRNHVHLTNCIHLKNHVHMQKP 4
           LRE D  IQ+HLRNHVHLTNCIHLKNH+H   P
Sbjct: 10  LREDDTGIQDHLRNHVHLTNCIHLKNHMHKYSP 42


>gb|EXC10952.1| DNA polymerase III subunit [Morus notabilis]
          Length = 1172

 Score = 57.0 bits (136), Expect = 7e-06
 Identities = 22/33 (66%), Positives = 28/33 (84%)
 Frame = -3

Query: 102 LRERDCNIQEHLRNHVHLTNCIHLKNHVHMQKP 4
           L+E + +I +HLRNH+HLTNCIHLKNH+H Q P
Sbjct: 10  LKEANGDISDHLRNHIHLTNCIHLKNHMHKQSP 42


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