BLASTX nr result

ID: Ephedra28_contig00020063 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00020063
         (431 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006856492.1| hypothetical protein AMTR_s00046p00080660 [A...    65   1e-08
ref|XP_001760023.1| predicted protein [Physcomitrella patens] gi...    59   9e-07
ref|XP_004165976.1| PREDICTED: BRCA1-associated protein-like [Cu...    57   2e-06
ref|XP_004139299.1| PREDICTED: BRCA1-associated protein-like [Cu...    57   2e-06
ref|XP_002285333.1| PREDICTED: BRCA1-associated protein [Vitis v...    55   7e-06

>ref|XP_006856492.1| hypothetical protein AMTR_s00046p00080660 [Amborella trichopoda]
           gi|548860373|gb|ERN17959.1| hypothetical protein
           AMTR_s00046p00080660 [Amborella trichopoda]
          Length = 486

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 29/46 (63%), Positives = 37/46 (80%)
 Frame = +3

Query: 3   SIKTRDEKITELEEQVRDLMVYIETQKTIENSPNAAEIRDGLILPV 140
           +IK RDEKI +LEEQVRD MVYIE QKT++N PN  +++ G +LPV
Sbjct: 421 AIKERDEKIMDLEEQVRDFMVYIEAQKTLDNLPNTDDVKGGTLLPV 466


>ref|XP_001760023.1| predicted protein [Physcomitrella patens]
           gi|162688773|gb|EDQ75148.1| predicted protein
           [Physcomitrella patens]
          Length = 407

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 26/44 (59%), Positives = 34/44 (77%)
 Frame = +3

Query: 3   SIKTRDEKITELEEQVRDLMVYIETQKTIENSPNAAEIRDGLIL 134
           S+K RD+KI +LEEQVRD M++IE QK +E S N  E+RDG +L
Sbjct: 341 SVKERDDKIADLEEQVRDFMLFIEAQKLLETSGNGGELRDGSVL 384


>ref|XP_004165976.1| PREDICTED: BRCA1-associated protein-like [Cucumis sativus]
          Length = 487

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/46 (56%), Positives = 37/46 (80%)
 Frame = +3

Query: 3   SIKTRDEKITELEEQVRDLMVYIETQKTIENSPNAAEIRDGLILPV 140
           S+K+R+EKI +LEEQ+RDL VYIE QKT+ N  ++ +I+ G +LPV
Sbjct: 422 SLKSRNEKIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPV 467


>ref|XP_004139299.1| PREDICTED: BRCA1-associated protein-like [Cucumis sativus]
          Length = 487

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/46 (56%), Positives = 37/46 (80%)
 Frame = +3

Query: 3   SIKTRDEKITELEEQVRDLMVYIETQKTIENSPNAAEIRDGLILPV 140
           S+K+R+EKI +LEEQ+RDL VYIE QKT+ N  ++ +I+ G +LPV
Sbjct: 422 SLKSRNEKIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPV 467


>ref|XP_002285333.1| PREDICTED: BRCA1-associated protein [Vitis vinifera]
           gi|297738981|emb|CBI28226.3| unnamed protein product
           [Vitis vinifera]
          Length = 470

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 24/46 (52%), Positives = 37/46 (80%)
 Frame = +3

Query: 3   SIKTRDEKITELEEQVRDLMVYIETQKTIENSPNAAEIRDGLILPV 140
           +I+++DEKI +LEEQ+RDL VYIE QKT+ +  ++ +I+ G +LPV
Sbjct: 404 AIRSKDEKILDLEEQIRDLTVYIEAQKTLHHMTDSNDIKGGTLLPV 449


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