BLASTX nr result

ID: Ephedra28_contig00020049 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00020049
         (694 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN39939.1| unknown [Picea sitchensis]                             107   4e-21
gb|ABR18114.1| unknown [Picea sitchensis]                              83   9e-14

>gb|ACN39939.1| unknown [Picea sitchensis]
          Length = 518

 Score =  107 bits (267), Expect = 4e-21
 Identities = 61/158 (38%), Positives = 92/158 (58%), Gaps = 14/158 (8%)
 Frame = -2

Query: 432 PEVNHMERSE----NPISSMEMPNYNSPTRTN-------TQYINTQQVEVDHHIDTSSSM 286
           P V  M RS     N I+ M+M  Y++ + +N        + +  ++ +V + +DTSS +
Sbjct: 43  PRVQEMRRSRSQIGNQIAPMDMVPYSNTSNSNGNSNTTVAEPVPIRKRQVSYKMDTSSRV 102

Query: 285 CYHDCIGLAPFFLHLVIAGGAIGYLGFLAVKRTLH---HKFDILFWYPKLXXXXXXXALF 115
           C  + +    F LH VIA G IGYLGFL +++       KF +  WYP+L       A+F
Sbjct: 103 C-RNRLSAFLFLLHFVIAIGGIGYLGFLGIRKAFRGGKEKFHMEHWYPQLAAAAATGAVF 161

Query: 114 SCVWQTLIRWFPKFMVRGVLYSSPAITFTASVMLVSAS 1
           SCVWQ +IR FP  MV+G+L+SSP ++ TA+++LVS S
Sbjct: 162 SCVWQAIIRRFPSVMVKGILWSSPTVSLTAAIVLVSTS 199


>gb|ABR18114.1| unknown [Picea sitchensis]
          Length = 482

 Score = 82.8 bits (203), Expect = 9e-14
 Identities = 45/124 (36%), Positives = 74/124 (59%), Gaps = 3/124 (2%)
 Frame = -2

Query: 363 PTRTNTQYINTQQVEVDHHIDTSSSMCYHDCIGLAPFFLHLVIAGGAIGYLGFLAVKRTL 184
           PT T+ +  ++  +EV  +I   S   Y + + L  F LH+++A   +GY GF  ++  L
Sbjct: 47  PTHTDAKAPHSA-IEVKGNIAAYSG-AYRNTLSLMVFILHILVALAGMGYFGFKGIQEAL 104

Query: 183 ---HHKFDILFWYPKLXXXXXXXALFSCVWQTLIRWFPKFMVRGVLYSSPAITFTASVML 13
              +H+F I  WYP+L       A+ S +WQ ++ W P F++R VL+SSP++TF AS+ML
Sbjct: 105 KKGNHRFHIERWYPQLGAAAVVGAISSYLWQWMVLWRPVFVIRRVLWSSPSLTFIASLML 164

Query: 12  VSAS 1
           +S +
Sbjct: 165 ISTT 168


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