BLASTX nr result
ID: Ephedra28_contig00020040
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00020040
(528 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003573418.1| PREDICTED: CRS2-associated factor 1, mitocho... 76 5e-12
ref|XP_006483899.1| PREDICTED: CRS2-associated factor 2, chlorop... 75 7e-12
ref|XP_006438328.1| hypothetical protein CICLE_v10031138mg [Citr... 75 7e-12
ref|XP_004287455.1| PREDICTED: CRS2-associated factor 1, chlorop... 74 2e-11
ref|XP_006853609.1| hypothetical protein AMTR_s00056p00043140 [A... 74 3e-11
gb|EXB82569.1| CRS2-associated factor 2 [Morus notabilis] 73 5e-11
ref|XP_006494323.1| PREDICTED: CRS2-associated factor 1, chlorop... 73 5e-11
ref|XP_006451251.1| hypothetical protein CICLE_v100106541mg, par... 73 5e-11
gb|EOY30694.1| RNA-binding CRS1 / YhbY domain-containing protein... 73 5e-11
gb|EMS62805.1| CRS2-associated factor 1, mitochondrial [Triticum... 73 5e-11
ref|XP_004298480.1| PREDICTED: CRS2-associated factor 2, chlorop... 73 5e-11
ref|XP_006349021.1| PREDICTED: CRS2-associated factor 2, chlorop... 72 6e-11
gb|EOY00533.1| RNA-binding CRS1 / YhbY (CRM) domain-containing p... 72 6e-11
gb|EMT13170.1| CRS2-associated factor 1, mitochondrial [Aegilops... 72 6e-11
ref|XP_004250974.1| PREDICTED: CRS2-associated factor 2, chlorop... 72 6e-11
dbj|BAK07821.1| predicted protein [Hordeum vulgare subsp. vulgare] 72 6e-11
emb|CBI28022.3| unnamed protein product [Vitis vinifera] 72 6e-11
ref|XP_001772884.1| predicted protein [Physcomitrella patens] gi... 72 6e-11
ref|XP_002280611.1| PREDICTED: CRS2-associated factor 1, chlorop... 72 6e-11
ref|XP_006840310.1| hypothetical protein AMTR_s00045p00074390 [A... 72 8e-11
>ref|XP_003573418.1| PREDICTED: CRS2-associated factor 1, mitochondrial-like
[Brachypodium distachyon]
Length = 437
Score = 75.9 bits (185), Expect = 5e-12
Identities = 36/79 (45%), Positives = 51/79 (64%)
Frame = -1
Query: 528 SSELVRIRCKGMRSSDYKRIGIKLKELVPCVLLSFERECILLWRGKDCSLENT*GYY*KK 349
+ ELVRI CKG+ SDY++IG+KL++LVPC+L+SF++E I++WRGKD
Sbjct: 318 TDELVRIDCKGLPKSDYRKIGVKLRDLVPCILVSFDKEQIIIWRGKD------------- 364
Query: 348 LCLSSYTVYKKSLQNNFQR 292
Y +S+QNN QR
Sbjct: 365 --------YDESMQNNLQR 375
>ref|XP_006483899.1| PREDICTED: CRS2-associated factor 2, chloroplastic-like [Citrus
sinensis]
Length = 552
Score = 75.5 bits (184), Expect = 7e-12
Identities = 33/46 (71%), Positives = 40/46 (86%)
Frame = -1
Query: 525 SELVRIRCKGMRSSDYKRIGIKLKELVPCVLLSFERECILLWRGKD 388
S LV++ CKGM +SDYK++G KLKELVPCVLLSF+ E IL+WRGKD
Sbjct: 349 SSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGKD 394
>ref|XP_006438328.1| hypothetical protein CICLE_v10031138mg [Citrus clementina]
gi|557540524|gb|ESR51568.1| hypothetical protein
CICLE_v10031138mg [Citrus clementina]
Length = 552
Score = 75.5 bits (184), Expect = 7e-12
Identities = 33/46 (71%), Positives = 40/46 (86%)
Frame = -1
Query: 525 SELVRIRCKGMRSSDYKRIGIKLKELVPCVLLSFERECILLWRGKD 388
S LV++ CKGM +SDYK++G KLKELVPCVLLSF+ E IL+WRGKD
Sbjct: 349 SSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGKD 394
>ref|XP_004287455.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 804
Score = 74.3 bits (181), Expect = 2e-11
Identities = 32/45 (71%), Positives = 40/45 (88%)
Frame = -1
Query: 522 ELVRIRCKGMRSSDYKRIGIKLKELVPCVLLSFERECILLWRGKD 388
ELVRI C+GM SDY++IG KLK+LVPCVL+SFERE IL+WRG++
Sbjct: 417 ELVRIDCQGMNGSDYRKIGAKLKDLVPCVLISFERESILMWRGRE 461
>ref|XP_006853609.1| hypothetical protein AMTR_s00056p00043140 [Amborella trichopoda]
gi|548857270|gb|ERN15076.1| hypothetical protein
AMTR_s00056p00043140 [Amborella trichopoda]
Length = 977
Score = 73.6 bits (179), Expect = 3e-11
Identities = 31/45 (68%), Positives = 40/45 (88%)
Frame = -1
Query: 522 ELVRIRCKGMRSSDYKRIGIKLKELVPCVLLSFERECILLWRGKD 388
ELVRI C+G+ +SDYK+IG KLK++VPCVL+SFE E IL+WRG+D
Sbjct: 569 ELVRINCQGLNASDYKKIGAKLKDIVPCVLISFENEHILMWRGRD 613
>gb|EXB82569.1| CRS2-associated factor 2 [Morus notabilis]
Length = 571
Score = 72.8 bits (177), Expect = 5e-11
Identities = 33/46 (71%), Positives = 39/46 (84%)
Frame = -1
Query: 525 SELVRIRCKGMRSSDYKRIGIKLKELVPCVLLSFERECILLWRGKD 388
S LV+I CKGM +SDYK++G KLKELVPCVLLSF+ E IL+WRG D
Sbjct: 368 SPLVKIDCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGSD 413
>ref|XP_006494323.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Citrus
sinensis]
Length = 837
Score = 72.8 bits (177), Expect = 5e-11
Identities = 31/45 (68%), Positives = 40/45 (88%)
Frame = -1
Query: 522 ELVRIRCKGMRSSDYKRIGIKLKELVPCVLLSFERECILLWRGKD 388
ELVRI C+GM SDY++IG KL++LVPCVL+SFERE IL+WRG++
Sbjct: 418 ELVRINCQGMNGSDYRKIGAKLRDLVPCVLISFEREHILMWRGQE 462
>ref|XP_006451251.1| hypothetical protein CICLE_v100106541mg, partial [Citrus
clementina] gi|557554477|gb|ESR64491.1| hypothetical
protein CICLE_v100106541mg, partial [Citrus clementina]
Length = 825
Score = 72.8 bits (177), Expect = 5e-11
Identities = 31/45 (68%), Positives = 40/45 (88%)
Frame = -1
Query: 522 ELVRIRCKGMRSSDYKRIGIKLKELVPCVLLSFERECILLWRGKD 388
ELVRI C+GM SDY++IG KL++LVPCVL+SFERE IL+WRG++
Sbjct: 424 ELVRINCQGMNGSDYRKIGAKLRDLVPCVLISFEREHILMWRGQE 468
>gb|EOY30694.1| RNA-binding CRS1 / YhbY domain-containing protein, putative
[Theobroma cacao]
Length = 767
Score = 72.8 bits (177), Expect = 5e-11
Identities = 30/45 (66%), Positives = 40/45 (88%)
Frame = -1
Query: 522 ELVRIRCKGMRSSDYKRIGIKLKELVPCVLLSFERECILLWRGKD 388
ELVR+ C+G++ SDY++IG KLKELVPCVL+SFE E IL+WRG++
Sbjct: 410 ELVRVNCEGIKGSDYRKIGAKLKELVPCVLISFENESILMWRGRN 454
>gb|EMS62805.1| CRS2-associated factor 1, mitochondrial [Triticum urartu]
Length = 260
Score = 72.8 bits (177), Expect = 5e-11
Identities = 30/47 (63%), Positives = 42/47 (89%)
Frame = -1
Query: 528 SSELVRIRCKGMRSSDYKRIGIKLKELVPCVLLSFERECILLWRGKD 388
+ ELVRI CKG+ SDY++IG+KL++LVPCVL+SF++E I++WRGKD
Sbjct: 144 ADELVRIDCKGLPKSDYRKIGVKLRDLVPCVLVSFDKEQIIVWRGKD 190
>ref|XP_004298480.1| PREDICTED: CRS2-associated factor 2, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 572
Score = 72.8 bits (177), Expect = 5e-11
Identities = 33/46 (71%), Positives = 39/46 (84%)
Frame = -1
Query: 525 SELVRIRCKGMRSSDYKRIGIKLKELVPCVLLSFERECILLWRGKD 388
S LV+I CKGM +SDYK++G KLKELVPCVLLSF+ E IL+WRG D
Sbjct: 358 SSLVKIDCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGPD 403
>ref|XP_006349021.1| PREDICTED: CRS2-associated factor 2, chloroplastic-like [Solanum
tuberosum]
Length = 564
Score = 72.4 bits (176), Expect = 6e-11
Identities = 32/44 (72%), Positives = 39/44 (88%)
Frame = -1
Query: 519 LVRIRCKGMRSSDYKRIGIKLKELVPCVLLSFERECILLWRGKD 388
LV+I C+GM +SDYK++G KLKELVPCVLLSF+ E IL+WRGKD
Sbjct: 355 LVKIDCRGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGKD 398
>gb|EOY00533.1| RNA-binding CRS1 / YhbY (CRM) domain-containing protein [Theobroma
cacao]
Length = 562
Score = 72.4 bits (176), Expect = 6e-11
Identities = 33/46 (71%), Positives = 39/46 (84%)
Frame = -1
Query: 525 SELVRIRCKGMRSSDYKRIGIKLKELVPCVLLSFERECILLWRGKD 388
S LV+I CKGM +SDYK+IG KLKEL PCVLLSF+ E IL+WRG+D
Sbjct: 353 SPLVKIDCKGMHASDYKKIGAKLKELAPCVLLSFDDEQILMWRGQD 398
>gb|EMT13170.1| CRS2-associated factor 1, mitochondrial [Aegilops tauschii]
Length = 377
Score = 72.4 bits (176), Expect = 6e-11
Identities = 29/47 (61%), Positives = 42/47 (89%)
Frame = -1
Query: 528 SSELVRIRCKGMRSSDYKRIGIKLKELVPCVLLSFERECILLWRGKD 388
+ ELVRI CKG+ SDY++IG+KL++LVPC+L+SF++E I++WRGKD
Sbjct: 144 ADELVRIDCKGLPKSDYRKIGVKLRDLVPCILVSFDKEQIIVWRGKD 190
>ref|XP_004250974.1| PREDICTED: CRS2-associated factor 2, chloroplastic-like [Solanum
lycopersicum]
Length = 563
Score = 72.4 bits (176), Expect = 6e-11
Identities = 32/44 (72%), Positives = 39/44 (88%)
Frame = -1
Query: 519 LVRIRCKGMRSSDYKRIGIKLKELVPCVLLSFERECILLWRGKD 388
LV+I C+GM +SDYK++G KLKELVPCVLLSF+ E IL+WRGKD
Sbjct: 355 LVKIDCRGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGKD 398
>dbj|BAK07821.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 443
Score = 72.4 bits (176), Expect = 6e-11
Identities = 29/47 (61%), Positives = 42/47 (89%)
Frame = -1
Query: 528 SSELVRIRCKGMRSSDYKRIGIKLKELVPCVLLSFERECILLWRGKD 388
+ ELVRI CKG+ SDY++IG+KL++LVPC+L+SF++E I++WRGKD
Sbjct: 323 TDELVRIDCKGLPKSDYRKIGVKLRDLVPCILVSFDKEQIIVWRGKD 369
>emb|CBI28022.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 72.4 bits (176), Expect = 6e-11
Identities = 31/45 (68%), Positives = 39/45 (86%)
Frame = -1
Query: 522 ELVRIRCKGMRSSDYKRIGIKLKELVPCVLLSFERECILLWRGKD 388
ELVRI C+G+ +SDY++IG KLK+LVPCVL+SFE E IL+WRG D
Sbjct: 404 ELVRINCQGLNASDYRKIGAKLKDLVPCVLISFEHEHILMWRGSD 448
>ref|XP_001772884.1| predicted protein [Physcomitrella patens]
gi|162675795|gb|EDQ62286.1| predicted protein
[Physcomitrella patens]
Length = 463
Score = 72.4 bits (176), Expect = 6e-11
Identities = 32/51 (62%), Positives = 41/51 (80%)
Frame = -1
Query: 522 ELVRIRCKGMRSSDYKRIGIKLKELVPCVLLSFERECILLWRGKDCSLENT 370
+LV++ CK M SDYK+IG KLK+LVPCVLLSFERE IL+WRG + E++
Sbjct: 251 DLVKVDCKNMNPSDYKKIGAKLKDLVPCVLLSFERESILMWRGPESLTESS 301
>ref|XP_002280611.1| PREDICTED: CRS2-associated factor 1, chloroplastic [Vitis vinifera]
Length = 752
Score = 72.4 bits (176), Expect = 6e-11
Identities = 31/45 (68%), Positives = 39/45 (86%)
Frame = -1
Query: 522 ELVRIRCKGMRSSDYKRIGIKLKELVPCVLLSFERECILLWRGKD 388
ELVRI C+G+ +SDY++IG KLK+LVPCVL+SFE E IL+WRG D
Sbjct: 404 ELVRINCQGLNASDYRKIGAKLKDLVPCVLISFEHEHILMWRGSD 448
>ref|XP_006840310.1| hypothetical protein AMTR_s00045p00074390 [Amborella trichopoda]
gi|548842028|gb|ERN01985.1| hypothetical protein
AMTR_s00045p00074390 [Amborella trichopoda]
Length = 570
Score = 72.0 bits (175), Expect = 8e-11
Identities = 30/47 (63%), Positives = 41/47 (87%)
Frame = -1
Query: 528 SSELVRIRCKGMRSSDYKRIGIKLKELVPCVLLSFERECILLWRGKD 388
+S +V+I C+GM +SDYK++G KLKELVPC+LLSF+ E IL+WRG+D
Sbjct: 353 ASSIVKINCQGMHASDYKKLGAKLKELVPCILLSFDDEQILMWRGQD 399