BLASTX nr result
ID: Ephedra28_contig00020013
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00020013
(539 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADE77352.1| unknown [Picea sitchensis] 112 7e-23
ref|XP_006415306.1| hypothetical protein EUTSA_v10008891mg [Eutr... 107 1e-21
ref|XP_002270166.1| PREDICTED: upstream activation factor subuni... 105 7e-21
ref|XP_006648278.1| PREDICTED: protein TRI1-like [Oryza brachyan... 103 2e-20
ref|XP_006361226.1| PREDICTED: upstream activation factor subuni... 103 3e-20
ref|XP_006878621.1| hypothetical protein AMTR_s00011p00260300 [A... 103 3e-20
ref|XP_004244435.1| PREDICTED: upstream activation factor subuni... 103 3e-20
gb|AAQ24534.1| SWIb domain-containing protein [Solanum chacoense] 102 6e-20
ref|XP_006295268.1| hypothetical protein CARUB_v10024355mg [Caps... 102 7e-20
gb|EOY25358.1| SWIB/MDM2 domain superfamily protein [Theobroma c... 101 1e-19
ref|XP_006408288.1| hypothetical protein EUTSA_v10021710mg [Eutr... 100 3e-19
ref|XP_006410720.1| hypothetical protein EUTSA_v10017454mg [Eutr... 100 4e-19
ref|XP_002879559.1| SWIB complex BAF60b domain-containing protei... 99 6e-19
ref|NP_565810.1| SWIB/MDM2 domain-containing protein [Arabidopsi... 99 8e-19
ref|XP_004307291.1| PREDICTED: upstream activation factor subuni... 99 8e-19
ref|XP_001766284.1| predicted protein [Physcomitrella patens] gi... 99 8e-19
ref|XP_006298716.1| hypothetical protein CARUB_v10014811mg [Caps... 98 1e-18
ref|XP_006298715.1| hypothetical protein CARUB_v10014811mg, part... 98 1e-18
ref|XP_006430903.1| hypothetical protein CICLE_v10013159mg [Citr... 97 2e-18
ref|XP_004952016.1| PREDICTED: upstream activation factor subuni... 97 3e-18
>gb|ADE77352.1| unknown [Picea sitchensis]
Length = 129
Score = 112 bits (279), Expect = 7e-23
Identities = 61/128 (47%), Positives = 78/128 (60%), Gaps = 26/128 (20%)
Frame = +1
Query: 76 AMAYRASRLLMSMV-GKDPSKNP-------------------------LMKQVSVSPALS 177
AM YR SRL M+ + PS+ L K +S+SP +
Sbjct: 2 AMIYRGSRLAMAAAKAQQPSRTAKAAAKGTVAAGAAAESTTKVAKHSGLFKPLSISPVMK 61
Query: 178 KFLGVSEISRPQATKKIWEYIKANNLQNPSKKTEIFCDAKLKSIFEERDSVTMLEIAKLL 357
KFLGVSE++R +A KKIWE+IKANNLQNP+ KTEI CD KLK+I ++++V M EIAKL+
Sbjct: 62 KFLGVSEVARSEAIKKIWEHIKANNLQNPANKTEILCDEKLKAILGQKENVNMFEIAKLI 121
Query: 358 SPHFPKAK 381
SPHF K K
Sbjct: 122 SPHFIKKK 129
>ref|XP_006415306.1| hypothetical protein EUTSA_v10008891mg [Eutrema salsugineum]
gi|557093077|gb|ESQ33659.1| hypothetical protein
EUTSA_v10008891mg [Eutrema salsugineum]
Length = 180
Score = 107 bits (268), Expect = 1e-21
Identities = 55/109 (50%), Positives = 69/109 (63%)
Frame = +1
Query: 52 RVLEITRRAMAYRASRLLMSMVGKDPSKNPLMKQVSVSPALSKFLGVSEISRPQATKKIW 231
RV R MA AS + G ++K V VSP L+ F G +E+SR A KK+W
Sbjct: 71 RVFGGCRTLMAKAASNAAATGAGAGKEGKGILKTVPVSPTLASFAGENELSRATAVKKVW 130
Query: 232 EYIKANNLQNPSKKTEIFCDAKLKSIFEERDSVTMLEIAKLLSPHFPKA 378
EYIK NLQNP+ + EI CD KLK+IF+ +D+V EIAKLLSPHFPK+
Sbjct: 131 EYIKGQNLQNPTNRREILCDDKLKTIFDGKDTVGFTEIAKLLSPHFPKS 179
>ref|XP_002270166.1| PREDICTED: upstream activation factor subunit spp27 [Vitis
vinifera] gi|147798865|emb|CAN68050.1| hypothetical
protein VITISV_015104 [Vitis vinifera]
gi|296090194|emb|CBI40013.3| unnamed protein product
[Vitis vinifera]
Length = 128
Score = 105 bits (262), Expect = 7e-21
Identities = 53/83 (63%), Positives = 59/83 (71%)
Frame = +1
Query: 127 PSKNPLMKQVSVSPALSKFLGVSEISRPQATKKIWEYIKANNLQNPSKKTEIFCDAKLKS 306
P + K V VSPAL KFLGV E SR +A KKIWE+IK NNLQNP+ K EI CD KLKS
Sbjct: 44 PRSGGITKPVPVSPALRKFLGVPEASRAEAVKKIWEHIKLNNLQNPTNKREILCDEKLKS 103
Query: 307 IFEERDSVTMLEIAKLLSPHFPK 375
+FE +D V LEI KLLS HF K
Sbjct: 104 VFEGKDKVGFLEIGKLLSHHFIK 126
>ref|XP_006648278.1| PREDICTED: protein TRI1-like [Oryza brachyantha]
Length = 125
Score = 103 bits (258), Expect = 2e-20
Identities = 52/86 (60%), Positives = 64/86 (74%), Gaps = 1/86 (1%)
Frame = +1
Query: 124 DPSKNPLMKQVSVSPALSKFLG-VSEISRPQATKKIWEYIKANNLQNPSKKTEIFCDAKL 300
+P K+ ++K + VS AL +F G E+SR ATK IW+YIKAN LQNP+ K EI+CD KL
Sbjct: 39 EPKKSGILKPLPVSDALRRFAGGTPEVSRAGATKLIWDYIKANGLQNPANKKEIYCDEKL 98
Query: 301 KSIFEERDSVTMLEIAKLLSPHFPKA 378
KS+F RD + MLEIAKLLSPHF KA
Sbjct: 99 KSLFAGRDKIGMLEIAKLLSPHFIKA 124
>ref|XP_006361226.1| PREDICTED: upstream activation factor subunit UAF30-like [Solanum
tuberosum]
Length = 122
Score = 103 bits (257), Expect = 3e-20
Identities = 54/87 (62%), Positives = 63/87 (72%)
Frame = +1
Query: 118 GKDPSKNPLMKQVSVSPALSKFLGVSEISRPQATKKIWEYIKANNLQNPSKKTEIFCDAK 297
GK SK ++K +SPAL KF+G SEI+R A KKIW+YIK NNLQNP+ K EI CD K
Sbjct: 36 GKGRSKG-ILKPQPISPALQKFVGTSEIARTDAVKKIWDYIKTNNLQNPANKKEINCDDK 94
Query: 298 LKSIFEERDSVTMLEIAKLLSPHFPKA 378
LK+IF +D V LEIAKLLS HF KA
Sbjct: 95 LKTIFAGKDKVGFLEIAKLLSFHFQKA 121
>ref|XP_006878621.1| hypothetical protein AMTR_s00011p00260300 [Amborella trichopoda]
gi|548831964|gb|ERM94766.1| hypothetical protein
AMTR_s00011p00260300 [Amborella trichopoda]
Length = 125
Score = 103 bits (257), Expect = 3e-20
Identities = 49/82 (59%), Positives = 62/82 (75%)
Frame = +1
Query: 130 SKNPLMKQVSVSPALSKFLGVSEISRPQATKKIWEYIKANNLQNPSKKTEIFCDAKLKSI 309
S + + K + VSPA+ KFLGV +ISR A KK+WEYIKANNLQNP+ + + CD KLK+I
Sbjct: 42 STSGIFKSIPVSPAMRKFLGVPDISRTDAMKKVWEYIKANNLQNPADRKVVMCDEKLKTI 101
Query: 310 FEERDSVTMLEIAKLLSPHFPK 375
FE +D V +LEIAKL+S HF K
Sbjct: 102 FEGKDKVGILEIAKLMSVHFVK 123
>ref|XP_004244435.1| PREDICTED: upstream activation factor subunit UAF30-like [Solanum
lycopersicum]
Length = 122
Score = 103 bits (256), Expect = 3e-20
Identities = 54/87 (62%), Positives = 62/87 (71%)
Frame = +1
Query: 118 GKDPSKNPLMKQVSVSPALSKFLGVSEISRPQATKKIWEYIKANNLQNPSKKTEIFCDAK 297
GK SK ++K +SPAL KF+G SEISR A KKIW+YIK NNLQNP+ K EI CD
Sbjct: 36 GKGRSKG-ILKPQPISPALQKFVGTSEISRTDAVKKIWDYIKTNNLQNPANKKEINCDDM 94
Query: 298 LKSIFEERDSVTMLEIAKLLSPHFPKA 378
LK+IF +D V LEIAKLLS HF KA
Sbjct: 95 LKTIFAGKDKVGFLEIAKLLSNHFQKA 121
>gb|AAQ24534.1| SWIb domain-containing protein [Solanum chacoense]
Length = 148
Score = 102 bits (254), Expect = 6e-20
Identities = 54/87 (62%), Positives = 62/87 (71%)
Frame = +1
Query: 118 GKDPSKNPLMKQVSVSPALSKFLGVSEISRPQATKKIWEYIKANNLQNPSKKTEIFCDAK 297
GK SK ++K +SPAL KF+G SEISR A KKIW+YIK NNLQNP+ K EI CD
Sbjct: 62 GKGRSKG-ILKPQPISPALQKFVGTSEISRTDAVKKIWDYIKTNNLQNPANKKEINCDDM 120
Query: 298 LKSIFEERDSVTMLEIAKLLSPHFPKA 378
LK+IF +D V LEIAKLLS HF KA
Sbjct: 121 LKTIFAGKDKVGFLEIAKLLSFHFQKA 147
>ref|XP_006295268.1| hypothetical protein CARUB_v10024355mg [Capsella rubella]
gi|482563976|gb|EOA28166.1| hypothetical protein
CARUB_v10024355mg [Capsella rubella]
Length = 113
Score = 102 bits (253), Expect = 7e-20
Identities = 56/110 (50%), Positives = 70/110 (63%)
Frame = +1
Query: 52 RVLEITRRAMAYRASRLLMSMVGKDPSKNPLMKQVSVSPALSKFLGVSEISRPQATKKIW 231
RV R MA AS +V ++K V VS L++F+G +E+SR A KKIW
Sbjct: 6 RVFGACRVLMAKAASS--SGVVSSRRQGTGILKVVPVSQPLAQFIGENEVSRTTAVKKIW 63
Query: 232 EYIKANNLQNPSKKTEIFCDAKLKSIFEERDSVTMLEIAKLLSPHFPKAK 381
EYIK NNLQNP+ K EI CD KLK+IF +DSV LEI+K LS HFPK++
Sbjct: 64 EYIKLNNLQNPANKREILCDEKLKTIFSGKDSVMFLEISKHLSQHFPKSR 113
>gb|EOY25358.1| SWIB/MDM2 domain superfamily protein [Theobroma cacao]
Length = 117
Score = 101 bits (252), Expect = 1e-19
Identities = 54/101 (53%), Positives = 65/101 (64%)
Frame = +1
Query: 76 AMAYRASRLLMSMVGKDPSKNPLMKQVSVSPALSKFLGVSEISRPQATKKIWEYIKANNL 255
A+A +S S + S LM+ + VSP L +FLG SE SR +A KKIW YIK + L
Sbjct: 16 AVAKASSTSFASSSASNTSGAGLMRMMPVSPQLGEFLGASESSRTEAVKKIWGYIKLHKL 75
Query: 256 QNPSKKTEIFCDAKLKSIFEERDSVTMLEIAKLLSPHFPKA 378
QNP+ K EI CD KLK IF +DSV M EI KLLSPHF K+
Sbjct: 76 QNPANKREILCDEKLKRIFAGKDSVGMFEITKLLSPHFVKS 116
>ref|XP_006408288.1| hypothetical protein EUTSA_v10021710mg [Eutrema salsugineum]
gi|557109434|gb|ESQ49741.1| hypothetical protein
EUTSA_v10021710mg [Eutrema salsugineum]
Length = 146
Score = 100 bits (248), Expect = 3e-19
Identities = 48/90 (53%), Positives = 61/90 (67%)
Frame = +1
Query: 106 MSMVGKDPSKNPLMKQVSVSPALSKFLGVSEISRPQATKKIWEYIKANNLQNPSKKTEIF 285
+S K P + K VSPAL++FLG E +R A K+IW Y+K+++LQNP+ K EIF
Sbjct: 55 VSPAKKTPRSTGIFKATPVSPALAQFLGTGETTRTDAIKEIWTYVKSHDLQNPADKREIF 114
Query: 286 CDAKLKSIFEERDSVTMLEIAKLLSPHFPK 375
CD KLK IF+ +D V LEI KLLSPHF K
Sbjct: 115 CDEKLKQIFQGKDKVGFLEITKLLSPHFVK 144
>ref|XP_006410720.1| hypothetical protein EUTSA_v10017454mg [Eutrema salsugineum]
gi|557111889|gb|ESQ52173.1| hypothetical protein
EUTSA_v10017454mg [Eutrema salsugineum]
Length = 112
Score = 99.8 bits (247), Expect = 4e-19
Identities = 52/104 (50%), Positives = 67/104 (64%), Gaps = 6/104 (5%)
Frame = +1
Query: 85 YRASRLLM------SMVGKDPSKNPLMKQVSVSPALSKFLGVSEISRPQATKKIWEYIKA 246
+ A R+LM S V ++K + VS L+ F+G +E++R A KKIWEYIK
Sbjct: 8 FGACRVLMAKAATSSAVSSGREGKGILKVMPVSQPLANFIGANEVARTTAVKKIWEYIKL 67
Query: 247 NNLQNPSKKTEIFCDAKLKSIFEERDSVTMLEIAKLLSPHFPKA 378
+NLQNP K EI CD KLK+IF +D+V LEIAKLLS HFPK+
Sbjct: 68 HNLQNPENKKEILCDGKLKTIFNGKDTVGFLEIAKLLSQHFPKS 111
>ref|XP_002879559.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297325398|gb|EFH55818.1| SWIB complex
BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 112
Score = 99.0 bits (245), Expect = 6e-19
Identities = 47/79 (59%), Positives = 59/79 (74%)
Frame = +1
Query: 142 LMKQVSVSPALSKFLGVSEISRPQATKKIWEYIKANNLQNPSKKTEIFCDAKLKSIFEER 321
++K V VS L+ F+G +E+SR A KKIWEYIK NNLQNP K EI CD +LK+IF +
Sbjct: 33 ILKVVPVSKPLATFIGENEVSRTTAVKKIWEYIKLNNLQNPENKREILCDEQLKTIFSGK 92
Query: 322 DSVTMLEIAKLLSPHFPKA 378
D+V LEI+KLLS HFPK+
Sbjct: 93 DTVGFLEISKLLSQHFPKS 111
>ref|NP_565810.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
gi|13877943|gb|AAK44049.1|AF370234_1 unknown protein
[Arabidopsis thaliana] gi|16323472|gb|AAL15230.1|
unknown protein [Arabidopsis thaliana]
gi|20197355|gb|AAM15040.1| Expressed protein
[Arabidopsis thaliana] gi|20197527|gb|AAM15113.1|
Expressed protein [Arabidopsis thaliana]
gi|21618090|gb|AAM67140.1| unknown [Arabidopsis
thaliana] gi|26451839|dbj|BAC43012.1| unknown protein
[Arabidopsis thaliana] gi|330254033|gb|AEC09127.1|
SWIB/MDM2 domain-containing protein [Arabidopsis
thaliana]
Length = 109
Score = 98.6 bits (244), Expect = 8e-19
Identities = 47/79 (59%), Positives = 59/79 (74%)
Frame = +1
Query: 142 LMKQVSVSPALSKFLGVSEISRPQATKKIWEYIKANNLQNPSKKTEIFCDAKLKSIFEER 321
++K V VS L+ F+G +E+SR A KKIWEYIK NNLQNP K EI CD +LK+IF +
Sbjct: 30 ILKVVPVSKPLANFIGENEVSRTTAVKKIWEYIKLNNLQNPVNKREILCDEQLKTIFSGK 89
Query: 322 DSVTMLEIAKLLSPHFPKA 378
D+V LEI+KLLS HFPK+
Sbjct: 90 DTVGFLEISKLLSQHFPKS 108
>ref|XP_004307291.1| PREDICTED: upstream activation factor subunit spp27-like [Fragaria
vesca subsp. vesca]
Length = 154
Score = 98.6 bits (244), Expect = 8e-19
Identities = 46/80 (57%), Positives = 59/80 (73%)
Frame = +1
Query: 142 LMKQVSVSPALSKFLGVSEISRPQATKKIWEYIKANNLQNPSKKTEIFCDAKLKSIFEER 321
+MK +SPAL FLG +E SR +A K+IW++IK N+LQNP+ K EI CD KLK +FE +
Sbjct: 75 IMKPRPISPALGSFLGAAESSRAEAVKQIWDHIKLNSLQNPANKKEIICDNKLKELFEGK 134
Query: 322 DSVTMLEIAKLLSPHFPKAK 381
+ V LEI KLLSPHF KA+
Sbjct: 135 EKVNFLEIGKLLSPHFVKAE 154
>ref|XP_001766284.1| predicted protein [Physcomitrella patens]
gi|162682498|gb|EDQ68916.1| predicted protein
[Physcomitrella patens]
Length = 107
Score = 98.6 bits (244), Expect = 8e-19
Identities = 47/81 (58%), Positives = 55/81 (67%)
Frame = +1
Query: 142 LMKQVSVSPALSKFLGVSEISRPQATKKIWEYIKANNLQNPSKKTEIFCDAKLKSIFEER 321
L + + VSP L KFLGV E SRP++ K+IW+YIK LQNP K EI CD KLK + +
Sbjct: 17 LTRAIQVSPTLKKFLGVGECSRPESMKRIWDYIKDQKLQNPQNKREILCDEKLKPVLGGK 76
Query: 322 DSVTMLEIAKLLSPHFPKAKK 384
D V EIAKLLS HFPKA K
Sbjct: 77 DKVGFTEIAKLLSEHFPKAPK 97
>ref|XP_006298716.1| hypothetical protein CARUB_v10014811mg [Capsella rubella]
gi|482567425|gb|EOA31614.1| hypothetical protein
CARUB_v10014811mg [Capsella rubella]
Length = 154
Score = 97.8 bits (242), Expect = 1e-18
Identities = 47/89 (52%), Positives = 60/89 (67%)
Frame = +1
Query: 109 SMVGKDPSKNPLMKQVSVSPALSKFLGVSEISRPQATKKIWEYIKANNLQNPSKKTEIFC 288
S+ K P + K VSP L++FLG E +R A K+IW YIK+++LQNP+ K EIFC
Sbjct: 64 SLAKKTPRSTGIFKVTPVSPVLAQFLGTGETTRTDAIKEIWTYIKSHDLQNPADKREIFC 123
Query: 289 DAKLKSIFEERDSVTMLEIAKLLSPHFPK 375
D LK IFE +D V LE++KLLSPHF K
Sbjct: 124 DETLKLIFEGKDKVGFLEVSKLLSPHFVK 152
>ref|XP_006298715.1| hypothetical protein CARUB_v10014811mg, partial [Capsella rubella]
gi|482567424|gb|EOA31613.1| hypothetical protein
CARUB_v10014811mg, partial [Capsella rubella]
Length = 159
Score = 97.8 bits (242), Expect = 1e-18
Identities = 47/89 (52%), Positives = 60/89 (67%)
Frame = +1
Query: 109 SMVGKDPSKNPLMKQVSVSPALSKFLGVSEISRPQATKKIWEYIKANNLQNPSKKTEIFC 288
S+ K P + K VSP L++FLG E +R A K+IW YIK+++LQNP+ K EIFC
Sbjct: 69 SLAKKTPRSTGIFKVTPVSPVLAQFLGTGETTRTDAIKEIWTYIKSHDLQNPADKREIFC 128
Query: 289 DAKLKSIFEERDSVTMLEIAKLLSPHFPK 375
D LK IFE +D V LE++KLLSPHF K
Sbjct: 129 DETLKLIFEGKDKVGFLEVSKLLSPHFVK 157
>ref|XP_006430903.1| hypothetical protein CICLE_v10013159mg [Citrus clementina]
gi|557532960|gb|ESR44143.1| hypothetical protein
CICLE_v10013159mg [Citrus clementina]
Length = 114
Score = 97.1 bits (240), Expect = 2e-18
Identities = 54/104 (51%), Positives = 68/104 (65%)
Frame = +1
Query: 67 TRRAMAYRASRLLMSMVGKDPSKNPLMKQVSVSPALSKFLGVSEISRPQATKKIWEYIKA 246
T A A ++ + GK +K + K V VS LSKFLG +E SR A KKIW+YI+
Sbjct: 11 TMMAAAAKSGAEATAAAGKK-AKGGIGKPVPVSAQLSKFLGANEASRSDAVKKIWQYIRQ 69
Query: 247 NNLQNPSKKTEIFCDAKLKSIFEERDSVTMLEIAKLLSPHFPKA 378
++LQNP+ K EI CD KLK+IF +DSV LEIAKLLS HF K+
Sbjct: 70 HDLQNPANKREIRCDDKLKTIFNGKDSVGFLEIAKLLSQHFVKS 113
>ref|XP_004952016.1| PREDICTED: upstream activation factor subunit UAF30-like [Setaria
italica]
Length = 129
Score = 96.7 bits (239), Expect = 3e-18
Identities = 50/82 (60%), Positives = 60/82 (73%), Gaps = 1/82 (1%)
Frame = +1
Query: 133 KNPLMKQVSVSPALSKFLG-VSEISRPQATKKIWEYIKANNLQNPSKKTEIFCDAKLKSI 309
K +MK V VS + +F G E++RPQA K IW +IKAN LQNP+KKTEI CDA LKS+
Sbjct: 47 KRGIMKPVPVSEEMRRFAGGAPELARPQAVKLIWAHIKANGLQNPAKKTEINCDATLKSL 106
Query: 310 FEERDSVTMLEIAKLLSPHFPK 375
F RD V MLEI+KLL+PHF K
Sbjct: 107 FGGRDKVGMLEISKLLNPHFLK 128