BLASTX nr result

ID: Ephedra28_contig00019966 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00019966
         (666 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK23486.1| unknown [Picea sitchensis] gi|116794028|gb|ABK269...    59   1e-06
gb|ABK22607.1| unknown [Picea sitchensis]                              59   1e-06
ref|XP_006852889.1| hypothetical protein AMTR_s00033p00217810 [A...    56   9e-06

>gb|ABK23486.1| unknown [Picea sitchensis] gi|116794028|gb|ABK26979.1| unknown
           [Picea sitchensis]
          Length = 143

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 12/98 (12%)
 Frame = -3

Query: 607 TVGSVIAGGTMYGKEIA------------EWVSSQISNLDTSKASQKPLSPVVSNVSKKD 464
           ++GS IA G  +G   A              V  ++   +   A+Q  + P +SN+S KD
Sbjct: 43  SIGSTIAEGVAFGTGSAIAHRAVDAFLGPRTVQHEVVQAEAPAAAQTSM-PAMSNLSGKD 101

Query: 463 ACEIESEAFQECFSKNSNIDMSKCEFYAKLLNECRQKS 350
           +C   S+AFQEC + N   D+ KC+FY  +LNECR+ S
Sbjct: 102 SCGNHSKAFQECLT-NYGSDIGKCQFYLDMLNECRRGS 138


>gb|ABK22607.1| unknown [Picea sitchensis]
          Length = 143

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 12/98 (12%)
 Frame = -3

Query: 607 TVGSVIAGGTMYGKEIA------------EWVSSQISNLDTSKASQKPLSPVVSNVSKKD 464
           ++GS IA G  +G   A              V  ++   +   A+Q  + P +SN+S KD
Sbjct: 43  SIGSTIAEGVAFGTGSAIAHRAVDAFLGPRTVQHEVVQAEAPAAAQTSM-PAMSNLSGKD 101

Query: 463 ACEIESEAFQECFSKNSNIDMSKCEFYAKLLNECRQKS 350
           +C   S+AFQEC + N   D+ KC+FY  +LNECR+ S
Sbjct: 102 SCGNHSKAFQECLT-NYGSDIGKCQFYLDMLNECRRGS 138


>ref|XP_006852889.1| hypothetical protein AMTR_s00033p00217810 [Amborella trichopoda]
           gi|548856503|gb|ERN14356.1| hypothetical protein
           AMTR_s00033p00217810 [Amborella trichopoda]
          Length = 137

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 30/92 (32%), Positives = 53/92 (57%), Gaps = 7/92 (7%)
 Frame = -3

Query: 604 VGSVIAGGTMYG-------KEIAEWVSSQISNLDTSKASQKPLSPVVSNVSKKDACEIES 446
           +GS IA G  +G       + +   +  +  ++DT+ A+Q      V++    DAC+I +
Sbjct: 47  IGSTIAQGMAFGVGSDMGHRAVESIMGPRTVHMDTAPAAQP-----VASAGASDACDIHN 101

Query: 445 EAFQECFSKNSNIDMSKCEFYAKLLNECRQKS 350
           +AFQ+C + N   D+SKC+FY  +L++CR+ S
Sbjct: 102 KAFQDCLN-NYGSDISKCQFYLDMLSQCRRNS 132


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